mRNA_Ecto-sp13_S_contig11982.1689.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11982.1689.1
Unique NamemRNA_Ecto-sp13_S_contig11982.1689.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: D8LKM7_ECTSI (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKM7_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 8.670e-30
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 1 
Query:    1 MALSIRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            MALSIRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG
Sbjct:    1 MALSIRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 52
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BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: A0A836C9I5_9STRA (Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.540e-24
Identity = 43/52 (82.69%), Postives = 48/52 (92.31%), Query Frame = 1 
Query:    1 MALSIRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            MA+SIR ATV+DL+QMQ  NLWCLPENYQMKYY+YHVLSWPQLL VAED+KG
Sbjct:    1 MAVSIRPATVEDLLQMQNTNLWCLPENYQMKYYMYHVLSWPQLLQVAEDYKG 52
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BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: A0A7S2AXF4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXF4_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 6.790e-24
Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 1 
Query:   10 SIRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            SIRQATVDDLI MQ  NLWCLPENY MKYY YH+LSWPQLL+VAEDHKG
Sbjct:    3 SIRQATVDDLIYMQNTNLWCLPENYNMKYYYYHILSWPQLLYVAEDHKG 51
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BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: A0A7S4N2F3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N2F3_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.630e-23
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 1 
Query:   13 IRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            IRQATVDDL+QMQ  NLWCLPENYQMKYY YH+LSWPQLL+VAEDH G
Sbjct:    4 IRQATVDDLLQMQQTNLWCLPENYQMKYYFYHLLSWPQLLWVAEDHDG 51
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BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: A0A1E7EJY3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EJY3_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.040e-23
Identity = 40/50 (80.00%), Postives = 45/50 (90.00%), Query Frame = 1 
Query:    7 LSIRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            +SIRQATV DL+Q+QT NLWCLPENYQMKYY YH+LSWPQLL+VAED  G
Sbjct:    2 VSIRQATVHDLLQIQTTNLWCLPENYQMKYYFYHLLSWPQLLWVAEDFDG 51
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BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: K3WV96_GLOUD (N-acetyltransferase domain-containing protein n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WV96_GLOUD)

HSP 1 Score: 93.6 bits (231), Expect = 1.050e-22
Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 1 
Query:    7 LSIRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            +SIR ATV+DL+QMQ ANLWCLPENYQMKYY YH+++WPQLL VAEDH G
Sbjct:    2 VSIRNATVEDLVQMQNANLWCLPENYQMKYYFYHIMTWPQLLQVAEDHNG 51
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BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: A0A7S3FFG7_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FFG7_9VIRI)

HSP 1 Score: 92.8 bits (229), Expect = 1.740e-22
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 1 
Query:   13 IRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            IR ATVDDL+ MQ ANLWCLPENYQMKYYLYH+LSWPQLLFVAED  G
Sbjct:    9 IRPATVDDLLAMQEANLWCLPENYQMKYYLYHILSWPQLLFVAEDTNG 56
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BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: A0A5D6YPA3_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YPA3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.020e-22
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 1 
Query:    7 LSIRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            +SIR ATV+DL+QMQ ANLWCLPENYQMKYY YH+ +WPQLL VAEDH G
Sbjct:    2 VSIRNATVEDLLQMQNANLWCLPENYQMKYYFYHITTWPQLLQVAEDHNG 51
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BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: A0A7S1ZI07_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZI07_TRICV)

HSP 1 Score: 92.4 bits (228), Expect = 3.500e-22
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 1 
Query:   13 IRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            +R ATVDDL+QMQ  NLWCLPENYQMKYY YH+LSWPQLL+VAEDH G
Sbjct:    4 VRTATVDDLLQMQQTNLWCLPENYQMKYYFYHLLSWPQLLWVAEDHDG 51
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Match: A0A830BK32_9LAMI (N-alpha-acetyltransferase 11 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BK32_9LAMI)

HSP 1 Score: 91.7 bits (226), Expect = 6.090e-22
Identity = 39/48 (81.25%), Postives = 43/48 (89.58%), Query Frame = 1 
Query:   13 IRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDHKG 156
            IR+AT DDL+ MQ  NLWCLPENYQMKYYLYHVLSWPQLL+VAED+ G
Sbjct:    4 IRKATADDLLAMQACNLWCLPENYQMKYYLYHVLSWPQLLYVAEDYSG 51
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11982.1689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKM7_ECTSI8.670e-30100.00N-acetyltransferase domain-containing protein n=2 ... [more]
A0A836C9I5_9STRA3.540e-2482.69Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus... [more]
A0A7S2AXF4_9STRA6.790e-2485.71Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S4N2F3_9STRA2.630e-2385.42Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7EJY3_9STRA3.040e-2380.00Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
K3WV96_GLOUD1.050e-2278.00N-acetyltransferase domain-containing protein n=3 ... [more]
A0A7S3FFG7_9VIRI1.740e-2285.42Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A5D6YPA3_9STRA2.020e-2278.00N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S1ZI07_TRICV3.500e-2281.25Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A830BK32_9LAMI6.090e-2281.25N-alpha-acetyltransferase 11 n=1 Tax=Phtheirosperm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11982contigEcto-sp13_S_contig11982:2332..2487 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score112.8
Seed ortholog evalue4.7e-23
Seed eggNOG ortholog2880.D8LKM7
Preferred nameNAA11
Model size156
KEGG koko:K20791
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006325,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006996,GO:0007276,GO:0007281,GO:0007292,GO:0008080,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0017196,GO:0017198,GO:0018002,GO:0018193,GO:0018200,GO:0018205,GO:0018206,GO:0018209,GO:0018393,GO:0018394,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0022626,GO:0030154,GO:0030920,GO:0031248,GO:0031365,GO:0031414,GO:0031415,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043543,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044703,GO:0048468,GO:0048477,GO:0048609,GO:0048856,GO:0048869,GO:0051276,GO:0051604,GO:0051704,GO:0061606,GO:0071704,GO:0071840,GO:1901564,GO:1902493,GO:1902494,GO:1990189,GO:1990190,GO:1990234,GO:1990904
Exons1
EggNOG free text desc.N-terminal peptidyl-glutamic acid acetylation
EggNOG OGsCOG0456@1,KOG3235@2759
EC2.3.1.255
Cds size156
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462635.1847777-CDS-Ecto-sp13_S_contig11982:2331..24871681462635.1847777-CDS-Ecto-sp13_S_contig11982:2331..2487Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11982 2332..2487 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11982.1689.1prot_Ecto-sp13_S_contig11982.1689.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11982 2332..2487 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11982.1689.1

>prot_Ecto-sp13_S_contig11982.1689.1 ID=prot_Ecto-sp13_S_contig11982.1689.1|Name=mRNA_Ecto-sp13_S_contig11982.1689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
MALSIRQATVDDLIQMQTANLWCLPENYQMKYYLYHVLSWPQLLFVAEDH
KG
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mRNA from alignment at Ecto-sp13_S_contig11982:2332..2487-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11982.1689.1 ID=mRNA_Ecto-sp13_S_contig11982.1689.1|Name=mRNA_Ecto-sp13_S_contig11982.1689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=156bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11982:2332..2487- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTCTCTCGATTCGGCAGGCGACAGTGGATGACCTCATCCAGATGCA
GACGGCAAACCTGTGGTGCCTGCCGGAGAACTACCAGATGAAGTACTACC
TCTATCATGTCCTCTCCTGGCCTCAGCTGCTCTTCGTTGCCGAGGACCAC
AAGGGT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11982:2332..2487-

>mRNA_Ecto-sp13_S_contig11982.1689.1 ID=mRNA_Ecto-sp13_S_contig11982.1689.1|Name=mRNA_Ecto-sp13_S_contig11982.1689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=156bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11982:2332..2487- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTCTCTCGATTCGGCAGGCGACAGTGGATGACCTCATCCAGATGCA
GACGGCAAACCTGTGGTGCCTGCCGGAGAACTACCAGATGAAGTACTACC
TCTATCATGTCCTCTCCTGGCCTCAGCTGCTCTTCGTTGCCGAGGACCAC
AAGGGT
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