mRNA_Ecto-sp13_S_contig1197.1682.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 504 bits (1298), Expect = 1.030e-171 Identity = 298/490 (60.82%), Postives = 318/490 (64.90%), Query Frame = 3
Query: 117 WLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQS---------------TIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSE-GDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
WLRAPLEHAAA GNLG+FTRLMDAGASAEAGWRGCDGRTLLGAAACSK+KKI+R LLTAGAKSDVNVLFGAKRE ALHLAAARGAEEA + L M+ +P +G TIVKAF+DTDTSLV+ATDH G+TALHHAAL+ HGRD DAVRVLLAAGADV+AKT DD L CAPLH AVCGR+PSTGTIRALLEGGADV+VRD E RT LHEAC +SSVAAVELLLRWGADEKLTDDGD TPADMIG S +GS+ GDIEAD QRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIAN N S SSV SS SNG S K++R SGED+GGGERETEDQMM D R LVTRLVGLEADGLFR VVGFL
Sbjct: 39 WLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKAL--------------MIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSS-SNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 370 bits (950), Expect = 3.720e-120 Identity = 239/487 (49.08%), Postives = 291/487 (59.75%), Query Frame = 3
Query: 84 KRGDLEAVEGVWLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGA--SDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
+RG WLRAP EHAAA GNL FTRLMDAGA+A AGWRGC+GRTLLGAAA +S+K+VRT LTAGA DVNVLFG +RE + A + +R + + V G + + + LCISEL L GAN +HL AV+EL AAGA NG SPLEIAA+RGQ+ +VKA +D D+ VDATD G+ ALH+AA + RDN DAVRVLL AGADV+AK D + L+ AV RI S GTIRALLEGGA+++ R +T LH AC SS VELLLRWGAD+KLT + +TPA ++ A D + E ++EAD+QRI +MLAR PA RSWRRR WLVLSRSCPTRV+IANG+ NG SAK++++SGE + + ET D MM D RDLV RL+ LEADG+FR VVGFL
Sbjct: 26 QRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGEREALMIDGADPNVRDRRKR----SPLHLAAVAG-----------HHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLL-GAN------------------SHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTS-LYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDE-ELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 354 bits (908), Expect = 2.220e-113 Identity = 229/481 (47.61%), Postives = 276/481 (57.38%), Query Frame = 3
Query: 117 WLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLE-----QIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCA-PLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIG-SEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
WLRAPLEHAAA GNL +FTRLMDAGA+ EAGWRGC GRTLLGAAA +S+K++RTLLTAGA DVNVLFG + E ALH+AAARGA++ R L + R+ G + TN SPLEIAA RG + ++KA +D +S VD + G+ ALH+ A RD DAVRVLL AGADVN K +D CA PLH AV + STGTI ALLEGGA+++ R + T LH AC + VELLLRWGADEKL ++ +TPAD++G + + + EAD+QRIH+MLARAPADRSWRRR WLVLSRSCPTRV IANG+ S SS+S NG SAK++R+SG+ + + ETEDQMM D RDLV RLVGLEA+GLFR VVGFL
Sbjct: 37 WLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDS--CATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRI----NGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 286 bits (732), Expect = 3.400e-87 Identity = 206/491 (41.96%), Postives = 240/491 (48.88%), Query Frame = 3
Query: 117 WLRAPLEHAAAGGNLGIFTRLMDAGA-SAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSP--------------PQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGR-DNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIG-SEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
WL+ PLEHAAA GNL +FTRLMDAG E GWRGC+GRTLLGAAA KS K+VR LL AGA DVNVLFG + + ALH+AAARGAEEA + L MV P VD D +G+TA+H A V RHG DN VR+LL AG VNA+T D L PLH AV RI S T ALLEGGA+ + T LH AC+ S+VAAVELLLRWGADE ++D + PAD+IG D ++ D++AD +RI +MLARAPADRSWRRR WLVLSRSCPTRV+IAN SR N AK++R+SGED GG E E E+QM D+ LV L+GLEADGLFR VVGFL
Sbjct: 38 WLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKAL--------------MVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCA--VNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIAN--------KGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 275 bits (703), Expect = 2.000e-77 Identity = 205/500 (41.00%), Postives = 257/500 (51.40%), Query Frame = 3
Query: 117 WLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQ----------------AAEYNHLGAVEELQAAGAKRC---------RTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSEGD-IEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
WLR PLEHAAA GNL +FTRLMDAG+S E GWRGC+GRTLLGA A +S+K+VR LL AG D NV F A+ + ALH+AAAR P +G V+ R RV IS L L+GA+ D PL + + ++G +C R +NG S L A G +TIVKAF++T VD TD + +T LH AA + + V VLL AGADVNAKT + PLH AV R+ S TIRA + T LH AC +S+ A V+LLL WGAD ++ PAD+I A D G + + IEAD + + +MLARAPAD+SWRR WLVLSRS PTRV+I N S SS N S K++R+SG+D+ + E E+QMM D+R L+ RLVGLEADGLFR +VGFL
Sbjct: 37 WLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAARDPN-------------------------LPACKGYHALHVAAERGHD-----RV----------------ISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGWSSLPNAVCCGHATIVKAFLETGID-VDTTDDQAYTVLHRAADM------DGCVVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGSS--------NSCSTKLARVSGKDSSRDD-ELENQMMVDWRVLLDRLVGLEADGLFRLMVGFL 474
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 257 bits (657), Expect = 5.230e-73 Identity = 198/495 (40.00%), Postives = 242/495 (48.89%), Query Frame = 3
Query: 117 WLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEY--------------NHLGAVEELQAAGAK---RCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSEGDI-----EADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGS---NGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSV 1526
WLRAPLEHAAA + T A+ W S+K+VRTLLTAGA D NVLFG + E ALH+ ARGAE++ R L M+ P + + F T R+ ++ + I L L A+ TPL AA NHL AV+EL AAGA RC NG S L++AA RG + ++ A +D D + A V DN DAVR LL GADVNAKT D + +PLH AV RI S G I + LH AC SSV VELLLRWGADEKLT+ +TPAD+I A +GD+ EAD QRI +M+A PADRSWRRR WLVLSRSCPTRV+IANG+ NG +AK++R+SGE + + TE M+ D R+LV RLVGLEADGL R V
Sbjct: 37 WLRAPLEHAAAKELGSLHT--------ADGHW----------------SEKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRAL--------------MIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQSTPLHLAASEGRALCLSELLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDN-------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTTDS-ICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRAL----QQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNAAKVARVSGESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV 475
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE) HSP 1 Score: 236 bits (603), Expect = 5.030e-71 Identity = 147/249 (59.04%), Postives = 171/249 (68.67%), Query Frame = 3
Query: 807 VDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSEGDIE-----ADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
V+AT+ G ALH+AA V D DAVRVLL AG DVN T D + PLH AV GRI S GTIRALLEG ADVD R +T LH AC +SV+ VELLLRWGADE+LT++ + PAD+I A +GD++ AD+QRI +ML RAPADRSWRRR WLVLSR CPTRV+I NG SSSR NG SAK++ +SGED G G+ ETED++MAD RDLV LVGLEAD LFR VV FL
Sbjct: 35 VNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFT-PLHVAVDGRIASDGTIRALLEG-ADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRAR----QQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNG-------SSSRGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE) HSP 1 Score: 228 bits (580), Expect = 1.200e-67 Identity = 146/261 (55.94%), Postives = 172/261 (65.90%), Query Frame = 3
Query: 798 TSLVDATDHRGFTALHHAAL-VGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTD-DGD-----------ETPADMIGA-SDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
+S V ATD G+TALH + DN D VRVLL AGADV+AKT D PLH AV RI G IRALLEGGA+V+ RD +T LH AC SSV VE LL WGADEKLTD DG+ ETP D+ A + G + IEAD RI QMLARAPADRSW RR WLVLSRSCPT+V+I+N + S S++SS G +G SA+M ++ +D GG ++ETEDQ ++RDLV RLVGLEAD LFR VVGFL
Sbjct: 9 SSEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTS-SSSNISSGSSG-DGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI) HSP 1 Score: 213 bits (541), Expect = 1.210e-61 Identity = 133/284 (46.83%), Postives = 164/284 (57.75%), Query Frame = 3
Query: 585 LSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQ----------------------------------AAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGA--SDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKI 1328
L L+G+N D + +TPL AA H + EL A RT SPLEIAAH G + ++KA +D D+S +D TD G+ ALH+AA+V RDN DAVRVLL AGADVN +D + PLH AV GR S GT+RALLEGG+++ R +T LH AC +SV VELLLRWGADEKLT++ +TPAD+I + E + EAD+QRI +ML APADRSWRRR WLVLSRSCPTRV+I
Sbjct: 2 LLLKGSNVDATTGYRETPLHLAASKGHALCISELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACANYGLRTEGTRCSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFT-PLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRSCPTRVEI 284
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE) HSP 1 Score: 207 bits (527), Expect = 1.960e-58 Identity = 185/491 (37.68%), Postives = 216/491 (43.99%), Query Frame = 3
Query: 180 MDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPL--------------------------------------FQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
MDAGA+ +AGWR C GRTLLGAAA K+VRTLL+AGA AARGA+++ R MV P + RV + L ++ + R L L+G SD +KT +N SPLE+AA+ G H ALH AA+ RDN DAVR LL AGADVN + A + + PLH A C RI S GTIRALLEGGA+++ +E T LHEAC SVA VELLL WGADEKLT+D +TPAD+IG RSWRRR WLVLSR C TRV IAN SS G AK++R SGEDAG + ET DQMM D RDLV RLVGLEA GLFR VVGFL
Sbjct: 1 MDAGANGKAGWRECRGRTLLGAAAYGD--KMVRTLLSAGA------------------TAARGADDSCR--------------AFMVAGADPSLRD------------------RVGHSPLHLAAVARHHRVAGMLLLKG-----SDVVAKTAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHRMLSNNTRSPLEVAANGG--------------------HGNVAALHCAAVFVVAVRDNGDAVRALLGAGADVNVE-ATNNICFTPLHLAACHRIASDGTIRALLEGGANINAC-TEDETPLHEACWHLSVAGVELLLHWGADEKLTNDVGDTPADVIGT---------------------------RSWRRRGWLVLSRYCQTRVNIANR--------SSSSGXXXXXAKVARASGEDAGRRDEETADQMMVDLRDLVGRLVGLEAGGLFRLVVGFL 377 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1197.1682.1 >prot_Ecto-sp13_S_contig1197.1682.1 ID=prot_Ecto-sp13_S_contig1197.1682.1|Name=mRNA_Ecto-sp13_S_contig1197.1682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp MIGASDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVback to top mRNA from alignment at Ecto-sp13_S_contig1197:14519..16059- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1197.1682.1 ID=mRNA_Ecto-sp13_S_contig1197.1682.1|Name=mRNA_Ecto-sp13_S_contig1197.1682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1541bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1197:14519..16059- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1197:14519..16059- >mRNA_Ecto-sp13_S_contig1197.1682.1 ID=mRNA_Ecto-sp13_S_contig1197.1682.1|Name=mRNA_Ecto-sp13_S_contig1197.1682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=369bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1197:14519..16059- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |