mRNA_Ecto-sp13_S_contig1197.1682.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1197.1682.1
Unique NamemRNA_Ecto-sp13_S_contig1197.1682.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI)

HSP 1 Score: 504 bits (1298), Expect = 1.030e-171
Identity = 298/490 (60.82%), Postives = 318/490 (64.90%), Query Frame = 3
Query:  117 WLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQS---------------TIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSE-GDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
            WLRAPLEHAAA GNLG+FTRLMDAGASAEAGWRGCDGRTLLGAAACSK+KKI+R LLTAGAKSDVNVLFGAKRE ALHLAAARGAEEA + L              M+   +P  +G                                                                                                                   TIVKAF+DTDTSLV+ATDH G+TALHHAAL+  HGRD  DAVRVLLAAGADV+AKT DD L CAPLH AVCGR+PSTGTIRALLEGGADV+VRD E RT LHEAC +SSVAAVELLLRWGADEKLTDDGD TPADMIG S  +GS+ GDIEAD QRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIAN N S SSV SS   SNG S K++R SGED+GGGERETEDQMM D R LVTRLVGLEADGLFR VVGFL
Sbjct:   39 WLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKAL--------------MIAGANPNLRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGTSGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSS-SNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513          
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 3.720e-120
Identity = 239/487 (49.08%), Postives = 291/487 (59.75%), Query Frame = 3
Query:   84 KRGDLEAVEGVWLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGA--SDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
            +RG        WLRAP EHAAA GNL  FTRLMDAGA+A AGWRGC+GRTLLGAAA  +S+K+VRT LTAGA  DVNVLFG +RE  +   A     +  +R      + +  V G                 +    +  +                    LCISEL L GAN                  +HL AV+EL AAGA      NG  SPLEIAA+RGQ+ +VKA +D D+  VDATD  G+ ALH+AA +    RDN DAVRVLL AGADV+AK   D    + L+ AV  RI S GTIRALLEGGA+++ R    +T LH AC  SS   VELLLRWGAD+KLT +  +TPA ++ A   D +  E ++EAD+QRI +MLAR PA RSWRRR WLVLSRSCPTRV+IANG+             NG SAK++++SGE +   + ET D MM D RDLV RL+ LEADG+FR VVGFL
Sbjct:   26 QRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGEREALMIDGADPNVRDRRKR----SPLHLAAVAG-----------HHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLL-GAN------------------SHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTS-LYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDE-ELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476          
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 2.220e-113
Identity = 229/481 (47.61%), Postives = 276/481 (57.38%), Query Frame = 3
Query:  117 WLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLE-----QIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCA-PLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIG-SEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
            WLRAPLEHAAA GNL +FTRLMDAGA+ EAGWRGC GRTLLGAAA  +S+K++RTLLTAGA  DVNVLFG + E ALH+AAARGA++  R L         + R+                                                                                             G +   TN    SPLEIAA RG + ++KA +D  +S VD  +  G+ ALH+ A      RD  DAVRVLL AGADVN K  +D   CA PLH AV   + STGTI ALLEGGA+++ R +   T LH AC     + VELLLRWGADEKL ++  +TPAD++G  +     + + EAD+QRIH+MLARAPADRSWRRR WLVLSRSCPTRV IANG+ S SS+S      NG SAK++R+SG+ +   + ETEDQMM D RDLV RLVGLEA+GLFR VVGFL
Sbjct:   37 WLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNGSRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDS--CATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRI----NGNSAKVARVSGQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511          
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 3.400e-87
Identity = 206/491 (41.96%), Postives = 240/491 (48.88%), Query Frame = 3
Query:  117 WLRAPLEHAAAGGNLGIFTRLMDAGA-SAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSP--------------PQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGR-DNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIG-SEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
            WL+ PLEHAAA GNL +FTRLMDAG    E GWRGC+GRTLLGAAA  KS K+VR LL AGA  DVNVLFG + + ALH+AAARGAEEA + L              MV    P                                                                                                                                   VD  D +G+TA+H A  V RHG  DN   VR+LL AG  VNA+T  D L   PLH AV  RI S  T  ALLEGGA+ +       T LH AC+ S+VAAVELLLRWGADE  ++D  + PAD+IG  D    ++ D++AD +RI +MLARAPADRSWRRR WLVLSRSCPTRV+IAN          SR   N   AK++R+SGED GG E E E+QM  D+  LV  L+GLEADGLFR VVGFL
Sbjct:   38 WLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKAL--------------MVAGADPNLFDCKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCA--VNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIAN--------KGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504          
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 2.000e-77
Identity = 205/500 (41.00%), Postives = 257/500 (51.40%), Query Frame = 3
Query:  117 WLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQ----------------AAEYNHLGAVEELQAAGAKRC---------RTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSEGD-IEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
            WLR PLEHAAA GNL +FTRLMDAG+S E GWRGC+GRTLLGA A  +S+K+VR LL AG   D NV F A+ + ALH+AAAR                             P  +G     V+  R        RV                IS L L+GA+ D        PL                     +  +       ++G  +C         R +NG  S L  A   G +TIVKAF++T    VD TD + +T LH AA +      +   V VLL AGADVNAKT  +     PLH AV  R+ S  TIRA             +  T LH AC +S+ A V+LLL WGAD   ++     PAD+I A D  G + + IEAD + + +MLARAPAD+SWRR  WLVLSRS PTRV+I N   S SS        N  S K++R+SG+D+   + E E+QMM D+R L+ RLVGLEADGLFR +VGFL
Sbjct:   37 WLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAARDPN-------------------------LPACKGYHALHVAAERGHD-----RV----------------ISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLGGAHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGWSSLPNAVCCGHATIVKAFLETGID-VDTTDDQAYTVLHRAADM------DGCVVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHVACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVIRAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQIGNRGGSGSS--------NSCSTKLARVSGKDSSRDD-ELENQMMVDWRVLLDRLVGLEADGLFRLMVGFL 474          
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 5.230e-73
Identity = 198/495 (40.00%), Postives = 242/495 (48.89%), Query Frame = 3
Query:  117 WLRAPLEHAAAGGNLGIFTRLMDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPLFQAAEY--------------NHLGAVEELQAAGAK---RCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSEGDI-----EADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGS---NGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSV 1526
            WLRAPLEHAAA     + T        A+  W                S+K+VRTLLTAGA  D NVLFG + E ALH+  ARGAE++ R L              M+    P  +   +    F    T          R+ ++ +      I  L L  A+         TPL  AA                NHL AV+EL AAGA    RC   NG  S L++AA RG + ++ A +D D              +  A  V     DN DAVR LL  GADVNAKT D  +  +PLH AV  RI S G I               +    LH AC  SSV  VELLLRWGADEKLT+   +TPAD+I A      +GD+     EAD QRI +M+A  PADRSWRRR WLVLSRSCPTRV+IANG+                NG +AK++R+SGE +   +  TE  M+ D R+LV RLVGLEADGL R V
Sbjct:   37 WLRAPLEHAAAKELGSLHT--------ADGHW----------------SEKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRAL--------------MIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQSTPLHLAASEGRALCLSELLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDN-------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTTDS-ICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRAL----QQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNAAKVARVSGESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV 475          
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 5.030e-71
Identity = 147/249 (59.04%), Postives = 171/249 (68.67%), Query Frame = 3
Query:  807 VDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSEGDIE-----ADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
            V+AT+  G  ALH+AA V     D  DAVRVLL AG DVN  T  D  +  PLH AV GRI S GTIRALLEG ADVD R    +T LH AC  +SV+ VELLLRWGADE+LT++  + PAD+I A      +GD++     AD+QRI +ML RAPADRSWRRR WLVLSR CPTRV+I NG       SSSR   NG SAK++ +SGED G G+ ETED++MAD RDLV  LVGLEAD LFR VV FL
Sbjct:   35 VNATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFT-PLHVAVDGRIASDGTIRALLEG-ADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRAR----QQGDLDDEEHDADNQRICRMLTRAPADRSWRRRGWLVLSRYCPTRVQIDNG-------SSSRGSYNGNSAKVATLSGEDTGRGDEETEDRIMADLRDLVDWLVGLEADSLFRLVVAFL 270          
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.200e-67
Identity = 146/261 (55.94%), Postives = 172/261 (65.90%), Query Frame = 3
Query:  798 TSLVDATDHRGFTALHHAAL-VGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTD-DGD-----------ETPADMIGA-SDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
            +S V ATD  G+TALH     +     DN D VRVLL AGADV+AKT  D     PLH AV  RI   G IRALLEGGA+V+ RD   +T LH AC  SSV  VE LL WGADEKLTD DG+           ETP D+  A  +  G +  IEAD  RI QMLARAPADRSW RR WLVLSRSCPT+V+I+N + S S++SS   G +G SA+M  ++ +D GG ++ETEDQ   ++RDLV RLVGLEAD LFR VVGFL
Sbjct:    9 SSEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEEETPPDVTDAPGENRGKDEAIEADQHRIRQMLARAPADRSWHRRRWLVLSRSCPTKVQISNTS-SSSNISSGSSG-DGLSAEMVSVNCKDLGGDDKETEDQKTVNWRDLVVRLVGLEADVLFRLVVGFL 267          
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.210e-61
Identity = 133/284 (46.83%), Postives = 164/284 (57.75%), Query Frame = 3
Query:  585 LSLRGANKDVSD*GSKTPLFQAAEYNHLGAVEELQ----------------------------------AAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGA--SDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKI 1328
            L L+G+N D +    +TPL  AA   H   + EL                                   A      RT     SPLEIAAH G + ++KA +D D+S +D TD  G+ ALH+AA+V    RDN DAVRVLL AGADVN    +D  +  PLH AV GR  S GT+RALLEGG+++  R    +T LH AC  +SV  VELLLRWGADEKLT++  +TPAD+I     +    E + EAD+QRI +ML  APADRSWRRR WLVLSRSCPTRV+I
Sbjct:    2 LLLKGSNVDATTGYRETPLHLAASKGHALCISELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACANYGLRTEGTRCSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFT-PLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRPRRQNDFDDEEEREADNQRIRRMLEHAPADRSWRRRGWLVLSRSCPTRVEI 284          
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Match: A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.960e-58
Identity = 185/491 (37.68%), Postives = 216/491 (43.99%), Query Frame = 3
Query:  180 MDAGASAEAGWRGCDGRTLLGAAACSKSKKIVRTLLTAGAKSDVNVLFGAKREPALHLAAARGAEEAPRRL*TLEQIRICVVGGIMVRSTSPPQQGTTESKVSFFRKGTMETPRRVPATRLSISLLPRAILCISELSLRGANKDVSD*GSKTPL--------------------------------------FQAAEYNHLGAVEELQAAGAKRCRTNNGDDSPLEIAAHRGQSTIVKAFIDTDTSLVDATDHRGFTALHHAALVGRHGRDNSDAVRVLLAAGADVNAKTADDRLYCAPLHNAVCGRIPSTGTIRALLEGGADVDVRDSEYRTLLHEACVWSSVAAVELLLRWGADEKLTDDGDETPADMIGASDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFRDLVTRLVGLEADGLFRSVVGFL 1538
            MDAGA+ +AGWR C GRTLLGAAA     K+VRTLL+AGA                   AARGA+++ R                MV    P  +                   RV  + L ++ + R       L L+G     SD  +KT                                                                 +N   SPLE+AA+ G                    H    ALH AA+     RDN DAVR LL AGADVN + A + +   PLH A C RI S GTIRALLEGGA+++   +E  T LHEAC   SVA VELLL WGADEKLT+D  +TPAD+IG                            RSWRRR WLVLSR C TRV IAN         SS  G     AK++R SGEDAG  + ET DQMM D RDLV RLVGLEA GLFR VVGFL
Sbjct:    1 MDAGANGKAGWRECRGRTLLGAAAYGD--KMVRTLLSAGA------------------TAARGADDSCR--------------AFMVAGADPSLRD------------------RVGHSPLHLAAVARHHRVAGMLLLKG-----SDVVAKTAYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHRMLSNNTRSPLEVAANGG--------------------HGNVAALHCAAVFVVAVRDNGDAVRALLGAGADVNVE-ATNNICFTPLHLAACHRIASDGTIRALLEGGANINAC-TEDETPLHEACWHLSVAGVELLLHWGADEKLTNDVGDTPADVIGT---------------------------RSWRRRGWLVLSRYCQTRVNIANR--------SSSSGXXXXXAKVARASGEDAGRRDEETADQMMVDLRDLVGRLVGLEAGGLFRLVVGFL 377          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1197.1682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD22_ECTSI1.030e-17160.82MHC_I C-terminus family protein n=1 Tax=Ectocarpus... [more]
A0A6H5L812_9PHAE3.720e-12049.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQN0_ECTSI2.220e-11347.61Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
D8LB27_ECTSI3.400e-8741.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHY5_9PHAE2.000e-7741.00Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5L7E1_9PHAE5.230e-7340.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXF0_9PHAE5.030e-7159.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6K9_9PHAE1.200e-6755.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQI9_ECTSI1.210e-6146.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHD6_9PHAE1.960e-5837.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1197contigEcto-sp13_S_contig1197:14519..16059 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score179.1
Seed ortholog evalue1.3e-42
Seed eggNOG ortholog2880.D8LD22
Model size1541
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons1
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-11_000110.1
Cds size369
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462634.82428-CDS-Ecto-sp13_S_contig1197:14518..148871681462634.82428-CDS-Ecto-sp13_S_contig1197:14518..14887Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1197 14519..14887 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462634.8343387-UTR-Ecto-sp13_S_contig1197:14887..160591681462634.8343387-UTR-Ecto-sp13_S_contig1197:14887..16059Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1197 14888..16059 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1197.1682.1prot_Ecto-sp13_S_contig1197.1682.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1197 14519..14887 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1197.1682.1

>prot_Ecto-sp13_S_contig1197.1682.1 ID=prot_Ecto-sp13_S_contig1197.1682.1|Name=mRNA_Ecto-sp13_S_contig1197.1682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=123bp
MIGASDYIGSEGDIEADSQRIHQMLARAPADRSWRRRSWLVLSRSCPTRV
KIANGNVSYSSVSSSRKGSNGTSAKMSRISGEDAGGGERETEDQMMADFR
DLVTRLVGLEADGLFRSVVGFL*
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mRNA from alignment at Ecto-sp13_S_contig1197:14519..16059-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1197.1682.1 ID=mRNA_Ecto-sp13_S_contig1197.1682.1|Name=mRNA_Ecto-sp13_S_contig1197.1682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1541bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1197:14519..16059- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCATCAGCAGCTGCTTCACGACAATCTCAAGATCGAACCCGTGTCGA TGGCTTTGAGGTGGAGATTTTCAAGCTCGTCAAAAGAGAGGCGACCTCGA AGCAGTGGAAGGAGTGTGGCTCCGAGCACCGCTCGAGCACGCCGCTGCCG GCGGAAACTTGGGTATCTTCACAAGGCTGATGGACGCCGGTGCCAGCGCG GAAGCAGGCTGGCGGGGTTGCGATGGACGAACGCTGCTAGGCGCGGCTGC ATGCAGTAAAAGCAAGAAGATCGTCCGGACTCTGCTCACCGCGGGGGCGA AGAGTGATGTAAACGTCCTATTCGGGGCTAAACGCGAGCCCGCTCTTCAC CTTGCGGCGGCGCGGGGTGCAGAGGAGGCGCCAAGGCGCTTATGAACGCT GGAGCAAATCCGAATCTGCGTAGTGGGAGGAATCATGGTCCGCTCCACCT CGCCGCCACAGCAGGGCACGACCGAGTCGAAGGTATCCTTCTTCCGAAAG GGGACGATGGAGACGCCAAGACGCGTGCCGGCGACACGCCTCTCCATCTC GCTGCTTCCCAGGGCCATACTTTGCATCTCTGAACTTTCGCTGCGCGGTG CAAACAAGGACGTGAGCGATTAAGGAAGTAAAACGCCACTTTTCCAGGCG GCAGAATACAACCACCTCGGAGCTGTCGAAGAGCTTCAAGCTGCCGGGGC CAAGCGGTGCCGTACCAACAATGGTGACGATTCTCCACTTGAGATTGCTG CACACAGAGGTCAGTCGACCATCGTGAAAGCCTTCATAGACACGGACACT AGTCTAGTCGACGCCACCGATCATCGCGGATTCACCGCCCTACACCATGC TGCACTTGTTGGGCGACATGGCCGTGACAACAGTGATGCCGTCCGTGTAC TCTTGGCAGCTGGGGCTGATGTCAACGCCAAGACTGCCGACGACCGCTTG TACTGCGCGCCTCTCCATAATGCCGTTTGTGGTCGGATACCATCGACCGG CACGATCCGCGCCCTGTTGGAGGGAGGGGCGGATGTCGATGTGCGTGACA GTGAGTACCGGACACTTCTGCATGAAGCTTGCGTATGGTCGAGTGTGGCG GCCGTGGAGCTTCTGCTGCGTTGGGGAGCAGATGAGAAGCTCACGGACGA TGGCGATGAAACCCCTGCAGACATGATAGGAGCGTCGGACTATATCGGTA GCGAAGGAGACATCGAGGCCGACAGCCAGCGCATCCACCAAATGCTGGCA CGCGCTCCAGCCGACAGGTCGTGGCGTCGCCGTAGCTGGCTGGTGCTGAG CCGTTCCTGCCCGACCAGGGTGAAGATTGCAAACGGAAATGTGAGCTACA GCAGTGTCAGCAGCAGCCGCAAGGGCAGCAACGGTACTTCCGCAAAGATG TCTAGGATCAGCGGCGAGGATGCGGGTGGGGGTGAGAGGGAGACGGAAGA CCAGATGATGGCGGACTTCAGGGATTTGGTCACCAGGCTAGTCGGACTGG AGGCTGACGGCTTATTCCGTTCTGTGGTAGGCTTCCTGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1197:14519..16059-

>mRNA_Ecto-sp13_S_contig1197.1682.1 ID=mRNA_Ecto-sp13_S_contig1197.1682.1|Name=mRNA_Ecto-sp13_S_contig1197.1682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=369bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1197:14519..16059- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATAGGAGCGTCGGACTATATCGGTAGCGAAGGAGACATCGAGGCCGA
CAGCCAGCGCATCCACCAAATGCTGGCACGCGCTCCAGCCGACAGGTCGT
GGCGTCGCCGTAGCTGGCTGGTGCTGAGCCGTTCCTGCCCGACCAGGGTG
AAGATTGCAAACGGAAATGTGAGCTACAGCAGTGTCAGCAGCAGCCGCAA
GGGCAGCAACGGTACTTCCGCAAAGATGTCTAGGATCAGCGGCGAGGATG
CGGGTGGGGGTGAGAGGGAGACGGAAGACCAGATGATGGCGGACTTCAGG
GATTTGGTCACCAGGCTAGTCGGACTGGAGGCTGACGGCTTATTCCGTTC
TGTGGTAGGCTTCCTGTGA
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