mRNA_Ecto-sp13_S_contig11964.1677.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: D8LBP8_ECTSI (Nudix (Nucleoside diphosphate linked moiety X)-type motif 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP8_ECTSI) HSP 1 Score: 311 bits (797), Expect = 1.230e-104 Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 1
Query: 1 GCVMNSQDEVLLVKDKHKGAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPKDTGAGALDINKCNHEIADACWMPLDQFKKQTRHSMLAVVADMLEKPEEKELTRSLHESAIPDRAPYFLYHRHS 465
GCVMNSQDEVLLVKDKHKGAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLP+DTGA LDINKCNHEIADACWMPLDQFKKQTRHSMLAVVADMLEKPEEKELTRSLHESAIPDRAPYFLYHRHS
Sbjct: 183 GCVMNSQDEVLLVKDKHKGAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPEDTGA--LDINKCNHEIADACWMPLDQFKKQTRHSMLAVVADMLEKPEEKELTRSLHESAIPDRAPYFLYHRHS 335
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: A0A836C878_9STRA (Nucleoside diphosphate linked moiety X-type motif 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C878_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.490e-42 Identity = 80/162 (49.38%), Postives = 104/162 (64.20%), Query Frame = 1
Query: 1 GCVMNSQDEVLLVKDKHKGAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPKDTGAGAL------DINKCNHEIADACWMPLDQFKKQTRHSMLAVVADML-EKPEEKELTRSLHESAIPDRAPYFLYHRHS 465
GCV++++ VL+VK++H A+WKFPGGLA+ GE +G AA REV EETGV + F +L+ R QH MQFGNSDLYFICR+ + TG ++ C HEIA+A WMPL++F Q H M+ VVA ML E P+ EL ES R PY +Y+ S
Sbjct: 166 GCVLDARGRVLVVKERHPRALWKFPGGLAEAGEDLGAAAAREVEEETGVRSAFAGLLAFRQQHAMQFGNSDLYFICRMT--RRTGEXXXXXXXXQELRPCAHEIAEARWMPLEEFAAQNTHPMMGVVAKMLMEGPQNHELKEETQESIFGSRPPYKMYYHAS 325
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: T1KF24_TETUR (Nudix hydrolase domain-containing protein n=3 Tax=Tetranychus urticae TaxID=32264 RepID=T1KF24_TETUR) HSP 1 Score: 112 bits (279), Expect = 2.630e-27 Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 1
Query: 1 GCVMNSQDEVLLVKDK-HKG-AMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPKDTGAGALDINKCNHEIADACWM 312
G VMNS+DE+L+VK++ H G WK+PGG A+ GE GE A REVWEETG+ T F SV++ RH H QF SD+YF+C+L +T + K HEIAD CWM
Sbjct: 113 GLVMNSKDEILVVKERYHLGYPFWKYPGGYANQGEDFGETAEREVWEETGIKTSFESVIAFRHSHRFQFKCSDIYFVCKLKPADETNMTPV---KNLHEIADVCWM 215
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: A0A1S3I2N1_LINUN (nudix hydrolase 8 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I2N1_LINUN) HSP 1 Score: 109 bits (273), Expect = 2.450e-26 Identity = 55/110 (50.00%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 1 GCVMNSQDEVLLVKDK-HKGAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPKDTGAGALDINKCNHEIADACWMPLDQF 327
G V+NS+ ++L++++K H MWK PGGLAD GE IGEAA REV+EETGV +F+S++ RH H+ + G D YFIC LM P +I KC+ EI+ CWM LD++
Sbjct: 109 GFVVNSEKKLLVIQEKYHVQKMWKLPGGLADTGEDIGEAAEREVFEETGVRCKFQSIICFRHMHKFRHGLDDFYFIC-LMEPMSK-----EITKCDREISACCWMDLDEY 212
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: R7V4Y1_CAPTE (Nudix hydrolase domain-containing protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7V4Y1_CAPTE) HSP 1 Score: 107 bits (267), Expect = 1.540e-25 Identity = 58/110 (52.73%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 1 GCVMNSQDEVLLVKDKH-KGAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPKDTGAGALDINKCNHEIADACWMPLDQF 327
G V+N ++EVL+V+++ + A WK PGGLAD GE IGEAA REV EETG+ F+S+L RHQH+ FG SDLYFIC LM + T I C +EIA A WMP+ ++
Sbjct: 112 GFVVNDKEEVLVVQERFARKAHWKLPGGLADAGEDIGEAAEREVREETGITCRFQSILCFRHQHQYNFGCSDLYFIC-LMKAEST-----QIKVCPNEIAVAQWMPIHEY 215
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: K0SGW7_THAOC (Nudix hydrolase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SGW7_THAOC) HSP 1 Score: 106 bits (264), Expect = 3.400e-25 Identity = 55/155 (35.48%), Postives = 90/155 (58.06%), Query Frame = 1
Query: 16 SQDEVLLVKDKHKGAM-WKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPKDTGAGALDINKCNHEIADACWMPLDQFKKQT-------RHSMLAVVADMLEKPEEKELTRSLHESAIPDRAPYFLYH 456
S +++L V++ K +K P GLA++GE + +A VREV EETG+ T F +L +RH H +QFG SDL+F+CRL D + + EI DACW+ +D+++ RH M+ + D++++ + ++ R++ S +P R LYH
Sbjct: 98 SSNQILCVRELRKNYRPYKLPTGLAELGEDLDQAVVREVLEETGINTVFEGILGVRHTHNIQFGRSDLFFVCRLSPLLDNDGSLPEPVPQSGEIEDACWLSVDEYRDMVNSDDDNVRHPMMQRIMDLVDQGADHDIQRTVLSSVVPGRKSSPLYH 252
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: A0A7S3Q322_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q322_9STRA) HSP 1 Score: 107 bits (266), Expect = 5.370e-25 Identity = 63/162 (38.89%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 7 VMNSQDEVLLVKD-KHKGAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRLMLPKDTGA-GALDINKC---NHEIADACWMPLDQFKKQTR-------HSMLAVVADMLEKPEEKELTRSLHESAIPDRAPYFLYH 456
V+NS+DE+L V++ ++ WK PGGLAD+GE + AA REV EETG+ EF +++ RH H +QFG SDLYF+C+++ +++ + G I K EIA A W+PL ++K H M+ + + E E + T + S +P R P +LYH
Sbjct: 149 VVNSRDEILCVRELRNNYRPWKLPGGLADLGEQLDTAAKREVMEETGIDCEFENIIGFRHTHGLQFGRSDLYFVCKMVPVENSDSEGNAIIPKPVAQADEIAAAAWVPLTEYKAMVNGVNGGEPHRMMQKMMSLYESGESIQPT--VMSSIVPGRGPSYLYH 308
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: UPI00142563F6 (nucleoside diphosphate-linked moiety X motif 6-like isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142563F6) HSP 1 Score: 106 bits (265), Expect = 7.030e-25 Identity = 55/122 (45.08%), Postives = 76/122 (62.30%), Query Frame = 1
Query: 1 GCVMNSQ-DEVLLVKDKHKGAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEM--QFGNSDLYFICRLMLPKDTGAGALDINKCNHEIADACWMPLDQFKKQTRHSMLA 357
G V+N +EVL+V+DKH+ + WKFPGG A++GE + E AVREV+EET + TEF+SVL+ R QH + FG SD YF+CRL DI C E+ DA W+ + H++L+
Sbjct: 142 GFVLNEDTEEVLMVQDKHRISRWKFPGGYANLGEDLSETAVREVFEETNIQTEFQSVLAFRQQHSLPYNFGRSDFYFVCRLK------PLTFDIKACESELVDAQWIKVKDILVSDDHTLLS 257
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: V4AS28_LOTGI (Nudix hydrolase domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AS28_LOTGI) HSP 1 Score: 104 bits (260), Expect = 7.920e-25 Identity = 59/131 (45.04%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 1 GCVMNSQ-DEVLLVKDKHKG-AMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQ--FGNSDLYFICRLMLPKDTGAGALDINKCNHEIADACWMPLDQFKKQTRHSMLAV-VADMLE 378
G V+N + +E+L+V+DK++ +WKFPGGL+D+GE IG+ A RE++EETG+ +EF+SVLSMR QH + FG SD Y ICR M P +I+ C EI + WM ++ K++ S L + + DM+E
Sbjct: 69 GVVINEKTEEILVVQDKNRPYTLWKFPGGLSDLGEDIGKTAEREIFEETGIKSEFKSVLSMRQQHNLPGAFGRSDFYIICR-MKPL-----TFEISACVEEIRECKWMHIEDLKREIEVSSLTMRLTDMVE 193
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Match: A0A7S2NSY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NSY2_9STRA) HSP 1 Score: 102 bits (254), Expect = 7.940e-25 Identity = 48/77 (62.34%), Postives = 63/77 (81.82%), Query Frame = 1
Query: 7 VMNSQDEVLLVKDKHKGAM-WKFPGGLADVGEGIGEAAVREVWEETGVMTEFRSVLSMRHQHEMQFGNSDLYFICRL 234
V+NS+DE+L+V++ K + WK PGGLA++GE + EAA+RE+ EETGV T+F SVLS+RH H MQFG SDLYF+CRL
Sbjct: 48 VVNSRDEILVVRELRKNYLPWKIPGGLAELGEHLDEAAIREIMEETGVPTKFTSVLSVRHTHGMQFGRSDLYFVCRL 124 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11964.1677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11964.1677.1 >prot_Ecto-sp13_S_contig11964.1677.1 ID=prot_Ecto-sp13_S_contig11964.1677.1|Name=mRNA_Ecto-sp13_S_contig11964.1677.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp MNSQDEVLLVKDKHKGAMWKFPGGLADVGEGIGEAAVREVWEETGVMTEFback to top mRNA from alignment at Ecto-sp13_S_contig11964:2416..4978- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11964.1677.1 ID=mRNA_Ecto-sp13_S_contig11964.1677.1|Name=mRNA_Ecto-sp13_S_contig11964.1677.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2563bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11964:2416..4978- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11964:2416..4978- >mRNA_Ecto-sp13_S_contig11964.1677.1 ID=mRNA_Ecto-sp13_S_contig11964.1677.1|Name=mRNA_Ecto-sp13_S_contig11964.1677.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=465bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11964:2416..4978- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |