mRNA_Ecto-sp13_S_contig11962.1676.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11962.1676.1
Unique NamemRNA_Ecto-sp13_S_contig11962.1676.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: D7G3T1_ECTSI (Long chain acyl-coA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T1_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 1.700e-182
Identity = 253/265 (95.47%), Postives = 260/265 (98.11%), Query Frame = 1
Query:    1 SVWATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQV 795
            +VWATERDA+LPVK+GTAGAAARPAKTVFEVFQKAVENHGENPAL FKD SGG+SADDAPWQTL WAQYYMETLRFGKSLLSLDFAPH+CVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPE T+CGFPVYTWKQFMELGSKIPD KIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQ+
Sbjct:    4 TVWATERDADLPVKIGTAGAAARPAKTVFEVFQKAVENHGENPALMFKDTSGGMSADDAPWQTLTWAQYYMETLRFGKSLLSLDFAPHRCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEETECGFPVYTWKQFMELGSKIPDTKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQL 268          
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A6H5KWQ0_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ0_9PHAE)

HSP 1 Score: 462 bits (1190), Expect = 7.230e-158
Identity = 222/265 (83.77%), Postives = 240/265 (90.57%), Query Frame = 1
Query:    1 SVWATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQV 795
            +VWATE  A+LP+KMGT+GAAA+P  TVF+VFQKAVENHGEN ALKFKD SGGVSADDAPWQTL WAQ+YMETLRFGKSL+SL FAPH+ +NIIGFNSTEWFIANMGAIAAGGI AGIYTSNLPEACQYITNHSEAEVVVVENEAQL KFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTW QFMELG +IPD  I+ERIEAQ+PG+CCSLIYTSGTTG+PKAVMISHDNMTWTAETL   F  +   R VSYLPLSH+A Q+
Sbjct:    4 TVWATEPHADLPIKMGTSGAAAKPPTTVFKVFQKAVENHGENVALKFKDTSGGVSADDAPWQTLTWAQFYMETLRFGKSLMSLGFAPHRSINIIGFNSTEWFIANMGAIAAGGIPAGIYTSNLPEACQYITNHSEAEVVVVENEAQLDKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWDQFMELGGEIPDSSIQERIEAQKPGECCSLIYTSGTTGKPKAVMISHDNMTWTAETLTTQFPLNETSRVVSYLPLSHIAAQI 268          
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A835Z6J1_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J1_9STRA)

HSP 1 Score: 318 bits (814), Expect = 2.580e-101
Identity = 149/265 (56.23%), Postives = 196/265 (73.96%), Query Frame = 1
Query:    7 WATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGN--VPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQV 795
            W TE D  +P++MG  G AARP++T+ EVF+ A+ N G +PALK++  + G+   + PW TL W  YY E+++F K+L+SL FAPH+CVNIIGFNS EWF+A MG I AGGIAAGIYT+NLPEAC+YI++HS+AEVVVVE   QL K++ +A  L  +KAIV+Y GN  +    DC  PVYTW  F +LG  + D ++EER+  Q+PG CC LIYTSGTTG PKAVM+SHDN+TWTA+T    F++   +R +SYLPLSH+A Q+
Sbjct:    7 WVTEPDEVIPIRMGAEGVAARPSRTMCEVFKSALANFGTHPALKYQ--AEGI---EGPWSTLTWTDYYNESVKFAKTLMSLGFAPHRCVNIIGFNSVEWFVAEMGCILAGGIAAGIYTTNLPEACRYISDHSQAEVVVVEGALQLKKYISIAGQLKHLKAIVVY-GNETLAPVPDCPVPVYTWSDFQQLGKDVGDAQVEERMAGQQPGHCCCLIYTSGTTGTPKAVMLSHDNITWTAQTALMHFSFKIGDRSISYLPLSHIAAQI 265          
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A4D9DBU9_9STRA (AMP-binding domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBU9_9STRA)

HSP 1 Score: 288 bits (738), Expect = 4.640e-90
Identity = 140/242 (57.85%), Postives = 173/242 (71.49%), Query Frame = 1
Query:   76 KTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCA--PFNWSHAERGVSYLPLSHVAGQV 795
            KTVF+VF++ V+ +G++PAL +K    G S     W +  W +YY  TL+F KSLLSL F  H  +N+IGFNS EW IAN GAIAAGG+  GIYTSN  +AC+YIT HSEAEVVVVEN  QL K++K+A  L  +KA+V+Y G   EG  C  P+Y+WK FM LGS + D+ +  RIEAQRPG CC+LIYTSGTTG PKAVMISHDN+TWT +   A  PF  +  +R VSYLPLSHVA Q+
Sbjct:   28 KTVFQVFEETVKKYGDSPALHYKKVPHGGSLATTEWSSYTWREYYDLTLKFCKSLLSLGFPAHGAINLIGFNSPEWLIANCGAIAAGGVGVGIYTSNGVDACKYITEHSEAEVVVVENAKQLEKYLKIAKELPRLKALVIYSGTA-EGYKCDVPIYSWKDFMALGSGVKDEAVRARIEAQRPGHCCTLIYTSGTTGPPKAVMISHDNLTWTVKNFVASLPFTLTCEDRSVSYLPLSHVAAQM 268          
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: G9BBC7_9STRA (Long-chain acyl-coenzyme A synthetase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=G9BBC7_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.760e-88
Identity = 142/263 (53.99%), Postives = 174/263 (66.16%), Query Frame = 1
Query:   13 TERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCA--PFNWSHAERGVSYLPLSHVAGQV 795
            T     + ++M   G  A   +TV++VF++ V+ +G+ PAL FK    G S +   W    W +YY  TL F KSLL+LDF  H  +NIIGFNS EW IAN GAIAAGG+  GIYTSN  EAC YI+ HSEAEVVVVEN  QL K+VK+A  L  +KA+V+Y G   EG  C  P+Y+WK FM LG    +  +  RIEAQRPG CC+LIYTSGTTG PKAVMISHDN+TWT +   A  PF  +  +R VSYLPL HVA Q+
Sbjct:    7 TSASGEVDLRMEKEGPGAWEPRTVYQVFEETVQRYGDRPALHFKKVPHGGSPETTGWSVYAWREYYDLTLTFAKSLLALDFPAHGAINIIGFNSPEWLIANCGAIAAGGVGVGIYTSNNAEACNYISEHSEAEVVVVENAKQLEKYVKIAKNLPRLKALVVYDGT-GEGFTCDTPIYSWKAFMALGKDKSEAAVRARIEAQRPGHCCTLIYTSGTTGPPKAVMISHDNLTWTVKNFVAALPFTLTCEDRSVSYLPLPHVAAQM 268          
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A7S2UWN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN0_9STRA)

HSP 1 Score: 265 bits (678), Expect = 5.170e-83
Identity = 129/267 (48.31%), Postives = 173/267 (64.79%), Query Frame = 1
Query:    7 WATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFP----VYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQV 795
            W T+  A L   +   G AA     +F+ F+++V++ G+ PAL FK+ S G  A   P+ +  W +YY + + F K+L+SLDF PH   NI+GFNS EWFI+  G +AAGGIAAGIY SN P+ CQYI++HSEAEVV++EN  QL K+ ++A  L  +KA+V++     E T    P    +  W  FM+LG+ IPD+ + ERI+AQ+PG C  L+YTSGTTG PKAVMISHDN TWT   L   F     +  VSYLPLSH+A Q+
Sbjct:    6 WTTDPKAELQPNLAETGLAANAPMVLFDFFRQSVKDFGDQPALFFKNISPGGDAASTPFSSYTWNEYYNQCITFAKALISLDFKPHTVSNIMGFNSKEWFISQFGTMAAGGIAAGIYPSNSPDQCQYISHHSEAEVVLLENNVQLEKYFQIANQLPKLKALVVWGEQPAEDTQKRLPGRVQLLHWDAFMQLGASIPDEMVNERIKAQKPGHCAVLVYTSGTTGPPKAVMISHDNATWTTTALAHSFPMDSNDITVSYLPLSHIAAQI 272          
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A8K1FDL6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDL6_PYTOL)

HSP 1 Score: 265 bits (678), Expect = 2.910e-81
Identity = 135/265 (50.94%), Postives = 169/265 (63.77%), Query Frame = 1
Query:    4 VWATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAE-TLCAPFNWSHAERGVSYLPLSHVAGQV 795
            VW  ++ A++ V+    G AAR   TV E+F+K V+  G   AL FK         D  W    W QYY   + F KSL+SL   PH CVNIIG NS EWF  N G IAAG + AGIYT+N PEAC YI+ H  A+VVVVEN+  L K++K+A  L S+KA+VM+ G VP    C  PVY ++ F++LG  + D  +EERI AQ PG CC+LIYTSGTTG PKAVMISHDN TWT+   L + +     E+ VS+LPLSHVA Q+
Sbjct:    4 VWEADKIADIVVQSD--GIAARKPATVMEIFRKTVDRRGSGRALSFKK--------DGKWVAYTWKQYYQNCIHFAKSLISLGVQPHDCVNIIGHNSPEWFFTNNGTIAAGAVIAGIYTTNGPEACHYISEHCNAKVVVVENKHHLDKYLKIADQLPSLKALVMWDGEVPRDIICPVPVYGFRDFLKLGEDVDDAIVEERIAAQLPGHCCTLIYTSGTTGPPKAVMISHDNFTWTSYCVLDSLYGVDETEKSVSFLPLSHVAAQL 258          
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A024U774_9STRA (AMP-binding domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U774_9STRA)

HSP 1 Score: 249 bits (635), Expect = 9.020e-75
Identity = 123/266 (46.24%), Postives = 171/266 (64.29%), Query Frame = 1
Query:   16 ERDANLPVKMGTAGA-AARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFN-----WSHAERGVSYLPLSHVAGQV 795
            +RD  + +++G  G  AA+   TV  +F+  V+ +GE+ AL         S  D  W+ L W QYY + + F KSLL+L F P   V+IIGFN+ EW I+++G I AGG+AAGIY++N  +A +Y+ +HS A V+V +N  QL K   +A+ L  +KA+V+Y   VP  T C  PVY +  F+ LG+ + D  +E RI  QRPG CC+LIYTSGTTG PKAVMISHDN+TWT +++   F      ++H +R VSYLPLSHVA Q+
Sbjct:   10 KRDGEVKIRLGQEGTIAAKEPTTVVALFRDTVKKYGEDGAL--------YSKQDGEWKILTWNQYYAKCVAFAKSLLALGFDPFDAVSIIGFNAAEWMISDLGCILAGGLAAGIYSTNSADAAKYVADHSGARVIVCDNVPQLEKMASIASALPQLKALVVYNAPVPAATSCSVPVYAFDDFLNLGTAVDDAALEARIANQRPGHCCTLIYTSGTTGNPKAVMISHDNITWTLQSMVDLFATTGDPFTHVDRFVSYLPLSHVAAQL 267          
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A6U1PAC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PAC9_9STRA)

HSP 1 Score: 234 bits (597), Expect = 5.470e-74
Identity = 112/225 (49.78%), Postives = 151/225 (67.11%), Query Frame = 1
Query:    7 WATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAAT-LTSVKAIVMYRGNVPEGTD--CGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPK 672
            W  + D  L  K+GT+G  + P  TVF VF+  V  HG+  ALKFK+   G  A D  +    W+QYY E ++F ++L++L+F PH C+NIIGFN  EWF+A  GA+AAGGI AGIY +N P+AC+YI+ HS+AEVVV+E+  QL K++++    L  +KA+V+Y     EG     G PVY W QF++LG  +P + +EERI+AQ PG C SLIYTSGTTG PK
Sbjct:    6 WVCDPDGFLQPKVGTSGPESLPPSTVFAVFKDTVAKHGDKSALKFKEVGPGAEAADVEFSIWTWSQYYAEVIKFAQALVALNFPPHACLNIIGFNCKEWFVAQFGAMAAGGIPAGIYPTNGPDACKYISEHSKAEVVVLEDNKQLDKYLQIGPRKLPKLKALVVYNEEPLEGAGDRLGIPVYGWSQFIDLGKGVPAETVEERIQAQLPGHCNSLIYTSGTTGPPK 230          
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A444UXP9_ACIRT (Long-chain-fatty-acid--CoA ligase ACSBG2 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444UXP9_ACIRT)

HSP 1 Score: 239 bits (611), Expect = 8.080e-74
Identity = 123/265 (46.42%), Postives = 165/265 (62.26%), Query Frame = 1
Query:   13 TERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHA----ERGVSYLPLSHVAGQV 795
            T+ D  + ++MG +G AA PA TV ++F + VE +G+  AL  KD           W  L + +YY       KS L L    +  V I+GFNS EWFIA++GAI AGG A GIYT+N PEACQY+  + +A V+VVEN  QL K +++   L  VKAI+ Y+  + E       +YTW +FME+G+ +PD +++E I +Q+P QCC+LIYTSGTTGQPK VM+SHDN+TWTA          HA    E  VSYLPLSH+A Q+
Sbjct:   41 TKEDGEVKLRMGDSGQAAEPAITVNQMFLQTVEQYGDQVALASKDGDN--------WNRLTYKEYYQRCRTAAKSFLKLGLERYHGVGILGFNSPEWFIADIGAILAGGFAVGIYTTNSPEACQYVAENCKANVLVVENHKQLQKILQIQDKLPHVKAIIQYKDALKEKKP---NLYTWAEFMEMGTDVPDSQLDEIIASQKPNQCCTLIYTSGTTGQPKGVMLSHDNITWTASATGKTVKLKHACEAQEVVVSYLPLSHIAAQM 294          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3T1_ECTSI1.700e-18295.47Long chain acyl-coA synthetase n=1 Tax=Ectocarpus ... [more]
A0A6H5KWQ0_9PHAE7.230e-15883.77AMP-binding domain-containing protein n=1 Tax=Ecto... [more]
A0A835Z6J1_9STRA2.580e-10156.23Long chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
A0A4D9DBU9_9STRA4.640e-9057.85AMP-binding domain-containing protein n=3 Tax=Mono... [more]
G9BBC7_9STRA2.760e-8853.99Long-chain acyl-coenzyme A synthetase n=1 Tax=Nann... [more]
A0A7S2UWN0_9STRA5.170e-8348.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1FDL6_PYTOL2.910e-8150.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024U774_9STRA9.020e-7546.24AMP-binding domain-containing protein n=1 Tax=Apha... [more]
A0A6U1PAC9_9STRA5.470e-7449.78Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A444UXP9_ACIRT8.080e-7446.42Long-chain-fatty-acid--CoA ligase ACSBG2 n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11962contigEcto-sp13_S_contig11962:699..4829 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score248.4
Seed ortholog evalue3.6e-63
Seed eggNOG ortholog157072.XP_008870416.1
Preferred nameACSBG1
Model size795
KEGG rclassRC00004,RC00014
KEGG koko:K01304,ko:K15013
KEGG ReactionR01280
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko03320,ko04920,map00061,map00071,map01100,map01212,map03320,map04920
KEGG ModuleM00086
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000038,GO:0001552,GO:0001676,GO:0003006,GO:0003674,GO:0003824,GO:0004467,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006629,GO:0006631,GO:0006633,GO:0006635,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007272,GO:0007275,GO:0007399,GO:0007498,GO:0007548,GO:0008150,GO:0008152,GO:0008366,GO:0008406,GO:0008585,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009719,GO:0009725,GO:0009888,GO:0009987,GO:0010033,GO:0012505,GO:0014070,GO:0015645,GO:0016020,GO:0016042,GO:0016053,GO:0016054,GO:0016289,GO:0016405,GO:0016787,GO:0016788,GO:0016790,GO:0016874,GO:0016877,GO:0016878,GO:0018130,GO:0019395,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019752,GO:0022414,GO:0030258,GO:0031957,GO:0031960,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0033865,GO:0033866,GO:0033875,GO:0033993,GO:0034030,GO:0034032,GO:0034033,GO:0034440,GO:0034641,GO:0034654,GO:0034976,GO:0035336,GO:0035337,GO:0035338,GO:0035383,GO:0035384,GO:0042221,GO:0042552,GO:0042592,GO:0042749,GO:0042752,GO:0042753,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045137,GO:0045187,GO:0045938,GO:0046390,GO:0046394,GO:0046395,GO:0046483,GO:0046545,GO:0046660,GO:0046949,GO:0047617,GO:0048513,GO:0048518,GO:0048520,GO:0048545,GO:0048608,GO:0048731,GO:0048856,GO:0048878,GO:0050789,GO:0050795,GO:0050896,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051384,GO:0051716,GO:0055086,GO:0055088,GO:0055090,GO:0055114,GO:0060249,GO:0061458,GO:0065007,GO:0065008,GO:0070050,GO:0070328,GO:0071616,GO:0071704,GO:0072329,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901575,GO:1901576
Exons6
EggNOG free text desc.decanoate-CoA ligase activity
EggNOG OGsCOG1022@1,KOG1256@2759
EC3.4.19.3,6.2.1.3
Cds size795
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11962.1676.1prot_Ecto-sp13_S_contig11962.1676.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11962 699..4829 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462634.2953897-CDS-Ecto-sp13_S_contig11962:698..8541681462634.2953897-CDS-Ecto-sp13_S_contig11962:698..854Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11962 699..854 +
1681462634.3103042-CDS-Ecto-sp13_S_contig11962:1271..13391681462634.3103042-CDS-Ecto-sp13_S_contig11962:1271..1339Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11962 1272..1339 +
1681462634.320337-CDS-Ecto-sp13_S_contig11962:1780..19311681462634.320337-CDS-Ecto-sp13_S_contig11962:1780..1931Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11962 1781..1931 +
1681462634.333524-CDS-Ecto-sp13_S_contig11962:2660..28491681462634.333524-CDS-Ecto-sp13_S_contig11962:2660..2849Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11962 2661..2849 +
1681462634.3429713-CDS-Ecto-sp13_S_contig11962:3982..41321681462634.3429713-CDS-Ecto-sp13_S_contig11962:3982..4132Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11962 3983..4132 +
1681462634.3511767-CDS-Ecto-sp13_S_contig11962:4748..48291681462634.3511767-CDS-Ecto-sp13_S_contig11962:4748..4829Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11962 4749..4829 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11962.1676.1

>prot_Ecto-sp13_S_contig11962.1676.1 ID=prot_Ecto-sp13_S_contig11962.1676.1|Name=mRNA_Ecto-sp13_S_contig11962.1676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=265bp
SVWATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDP
SGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTE
WFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKF
VKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEE
RIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAE
RGVSYLPLSHVAGQV
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mRNA from alignment at Ecto-sp13_S_contig11962:699..4829+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11962.1676.1 ID=mRNA_Ecto-sp13_S_contig11962.1676.1|Name=mRNA_Ecto-sp13_S_contig11962.1676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4131bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11962:699..4829+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGTGTTTGGGCAACCGAGCGAGACGCCAACCTTCCGGTGAAGATGGGGAC GGCGGGGGCCGCGGCCAGGCCAGCGAAGACGGTTTTCGAGGTGTTCCAGA AGGCGGTGGAGAACCATGGGGAGAACCCCGCCCTAAAATTCAAGGACCCC TCGGGGGTGAGTGTATTAGTTGTTGTTGTTGTTGATGAGAGAGAAATACG GAGCAGGCGTTGTTTTGTTTTTGTTTGGTGCCATAATTTTTTTCTTAAAG AAGTGCATCTCTATCCACAGACAAACGAGTCCAGGAATCATCAAAGAATT CATATCCCCCATCCTCTCGCGTGTCTGAACGTCTTGGCGCGCCGGCTTTA TTTCGGATGTCGATCCTTGAAGAAGGAAGCCGATTGGTGGAGTTTTTTTT CACGATCACCTGTGGCCTGGTTGCCCTCAATCACTCTGCTTGTTCCCCCT ACGCCGCATGAGTGTGAGTGTTTATGTCTCAGTATGTTTCGATGCGTGGT ATGTGCATGCTACGGCTGACCATTTAGTGTGCGTGTGTTTTCTTCCCGTC TTCCCTTGTTTCTACACCCATAGGGCGTGTCTGCGGACGATGCCCCGTGG CAGACGCTAAACTGGGCGCAGTACTACATGGAGACGCTCAGGTGGGGGTA ACGGCACCCAGGGTGGACAATTGGCCGTATCGTTTGGTGGTGATGGTTGG TGTTGTTGCTAATGTCTGCTTGTTGATGTTCTTGTTGCTGTGGTCGGTGT GTTGCGTTAATGCGTGCTGTCCTTAGTTTCGCATCTGCGCCACCGTGTAA CAAAAAAATACCATAGCTATCTCGACAGCACTGGATTGTTTTGTCTGTGT GCTCCTAGAAGCAGATCAACCAAACGACAGTTGGTTTTTCTTTGACGGGT GCAGACAAGTTAGTGTTGTGATCGTAGTTCGAAGTATTTTCTAGGCTAGT CAGGTCTGTTGTACCGTCTAGTCGGTGAAACTCTTCAAGGTGGCGAAAAA AATGATTCATTTTGGCCATTCTGTCGTGGTAGAGAACCACCAGTGCTGAT TATCTTCTTCTGTTTTCTATGTTCTGCGGCAGGTTCGGCAAGAGCCTGCT ATCACTCGATTTCGCTCCGCACCAATGCGTTAACATCATCGGCTTCAACT CGACCGAGTGGTTCATCGCCAACATGGGAGCCATTGCGGCAGGAGGGATC GCCGCCGGCATCTACACCTCCAACCTCCCCGAGGTGGGCATTACGCTGGA AGCGCTAACTTTAACCCTGACTCTTATCCAAGACACATATAGCTGTCGAC CCTTTTTTTTTGCGGGGGGGGAGGGGGGGGGGCAGCATCCGTACGTCCAA CATTCTGGAGGTCGCATGCTCAGTTGCTCCTCGTCCTCGTCGCTATATTT TTGTACTCTCCTGAGGCTTCTGTGTTCCTTTGGGGAGGCCGGTACACCGG GGCCCCCAATCGGATGCGGGTACGGAGTTCCGAGTCCTCGAGAGCGCTTG TGGTGTTGCTGTCGTGAAGGTCATCGTTGTTGTCTTGTTGTTGCTGAGGA TGGTGATAGCGACCGACTAGCCATGGTGGCATCCTCGTACTGTACGTACG ATCGTTTTTCTGCAGGTATCTATCGCTCCTTCCATGGCACCAGGCGTTCC AAGATGATACCTTCTCTCATAGAACAAAAACAACATCAAATTCAACTTCT CGCGAACCACTCCGATGCGGAGGCGTTCTTTTGCGGCGACATCAGATGTT CACACCCTTCTTACATCGTTGATGCATGGCAGAATTCCCTCTCCATGAAT CTATCAACCCGAATCAACCCAGTGCTACAGGCTTGCCAGTACATCACTAA CCACCCCTAGCCGGAGTTTTTCTTTTTGCGAAGACATAACGTTGACGCCC TTCTTTCACGGCAATGCGCTAAACATTTATCCATGAAACCGAACCAACCG GTGTTCGTTCAGGCTTGCCAGTACATCACGAACCACTCCGAGGCGGAGGT GGTGGTGGTCGAGAACGAGGCACAGCTCGCCAAGTTCGTCAAGCTAGCGG CCACCCTCACCTCGGTGAAGGCCATCGTCATGTACAGGGGCAACGTACCG GAGGGGACGGACTGCGGCTTCCCCGTATACACGTGGAAACAGTTCATGGA GGTTGGTAACCCGTACATGACAGCATACCGCCGTACTTTTATCGCAAACC TTACTTGCCCCCCCCCCCCGCCCCCCATTCCCTTTCCTTTCGGGAGGAGG ACTAGAGTGACTGTTAGCATTGGCCTGGGCATAAGCACTCTCCCGGGAAG TAGCAGTAACCAACCCCAGCAACCGCAGCAGCAACCACAACAACAACAAC TACAGCGGTGCTTACACTACCAATGCCCCTCCCCCCCTCAAGCGATGATG ACGGCTTCGAGTTTGCCGAAGGTCTAGCTCACTTTGAAGTGGCTACCGGC CTTCCCTTCGTGTCGAGCGCGCTTTCTTCATCTCCCTTGTCCTTTGAGCC TTGGTCCAAGCACCGTGCTTGCGCTAAGGCCTTAAAGGCGGTGTTGTGCT CGCCACACTGATCCCTCATTGCGGCATTAAACACGACGTTCTTGATACAC CTTCCTGTGCGTGTGAGTTTGCGAGCTAGTGACGGATTGTGTTCATACGA TAAACTACGAAGAACTATGTAGGTCTTCGGGAAAAGAAAAAAAACGCGCG AAAACGCTTTCTCGTTCGGTTGGTGCCTCGACAGAGAGGGAAGGGGGGCT GGAGAGGGGGAGGGGACGAGTGCTGTGTGTGATTATGCGTGCGTTTAGAC ACTTTGCTCGGCTCGTGGGTCAACCACTTTGATTGATTCGTGTTTCTTTT TCGAACTGGGTTGAAACTTATTTTCTGTGGTTTATGTAGGGATATTCACC CGTACGACACGCGCCGCGCGGTGCAAGCCCTTGTGGTATCGTTATTTGGC TGTGTCTGCCACTATGTTTAAGAAATTTATCTCCTTCCTAGCACCACCAG CTAGGGCGAAAGTGTTAAGTTGTCTCCGACTGCTGATCTTCCCAACGGTG CAGAGCAGTCACCGAAAACAAGAAGCAACAGAACCGAAATCCGTGGCCAG CGCACACCACCGACACCCCCAGTCCTTTCCCCGCGAGTGCAGCACCCGCT TTGAAAACCCTCTGCTGGTTGTGACCCAGTTGCTTCTCAGTCGTCCGGAT TTGCAAATCACTGTGGCTTGTTGATTGATCAGGCCATTTCAACCTTGTCC CTCGTGCTGTGCAATGATGGTTGTCCCCCATCAGCTTGGGAGTAAGATCC CAGACGATAAGATCGAGGAGCGCATCGAGGCGCAAAGGCCGGGTCAGTGC TGCTCTCTCATCTACACCAGCGGGACCACCGGCCAACCCAAGGCGGTCAT GATCAGCCACGACAACATGACTTGGACCGCGGAGGTGGCTACTACTTGTT TTGTAGTTTTTGGTTCTCCGAATTGTTGGTTACACATGTAACCAGTCGTG TGGGTTTTGTTTTTCCAGGTGCAGTCTCTCCTGCCGCGGCGAAAAAGAAG TTTAGGGGTGGTTGAAACTATAGTGGCCCCAGCATCGAAGATCCACGCTG TGGTAGTGTAGTGGCGGCTTGGTCCTCTCTCTTGACGGGATGGTTGTCGG TTGGTCATGACGAGAGATCTACGAAATCTATGACTAAATGTCGCTCGATT AGACGGATAGGCTTCCGAGAGGAGTAGCGACCATTGCGAACCTTGCGACA TACCAACAACGCATACCCCCTCTTCCACCCCTGCAATCGGGCCCGGATGC TTCTCGGTGCTTTTCCTTGTTCCGTCAAGAGTTCAATTCCCAATACCAAA CTTCGCATGAGCAGCAACACTGTCTTTCGGGTATTTCTTGTCGCTTGTTC TCCACCCCTCCCGTCCTCCTCATATTCGCCGGTATTTGACACGCCTCCCG TTGTTCCCCGCTCTACATGCTTATTGTATTGCCCCCCCGCCCCCCCCCCC CAATCGTTCTCACGCCTCCGCTTCCTATTTGCGTGGTACTTCCCTGGAAG ACGCTCTGCGCACCGTTCAACTGGAGTCACGCGGAGAGGGGCGTCTCGTA CCTCCCCCTCAGCCACGTCGCCGGCCAGGTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11962:699..4829+

>mRNA_Ecto-sp13_S_contig11962.1676.1 ID=mRNA_Ecto-sp13_S_contig11962.1676.1|Name=mRNA_Ecto-sp13_S_contig11962.1676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=795bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11962:699..4829+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGTGTTTGGGCAACCGAGCGAGACGCCAACCTTCCGGTGAAGATGGGGAC
GGCGGGGGCCGCGGCCAGGCCAGCGAAGACGGTTTTCGAGGTGTTCCAGA
AGGCGGTGGAGAACCATGGGGAGAACCCCGCCCTAAAATTCAAGGACCCC
TCGGGGGGCGTGTCTGCGGACGATGCCCCGTGGCAGACGCTAAACTGGGC
GCAGTACTACATGGAGACGCTCAGGTTCGGCAAGAGCCTGCTATCACTCG
ATTTCGCTCCGCACCAATGCGTTAACATCATCGGCTTCAACTCGACCGAG
TGGTTCATCGCCAACATGGGAGCCATTGCGGCAGGAGGGATCGCCGCCGG
CATCTACACCTCCAACCTCCCCGAGGCTTGCCAGTACATCACGAACCACT
CCGAGGCGGAGGTGGTGGTGGTCGAGAACGAGGCACAGCTCGCCAAGTTC
GTCAAGCTAGCGGCCACCCTCACCTCGGTGAAGGCCATCGTCATGTACAG
GGGCAACGTACCGGAGGGGACGGACTGCGGCTTCCCCGTATACACGTGGA
AACAGTTCATGGAGCTTGGGAGTAAGATCCCAGACGATAAGATCGAGGAG
CGCATCGAGGCGCAAAGGCCGGGTCAGTGCTGCTCTCTCATCTACACCAG
CGGGACCACCGGCCAACCCAAGGCGGTCATGATCAGCCACGACAACATGA
CTTGGACCGCGGAGACGCTCTGCGCACCGTTCAACTGGAGTCACGCGGAG
AGGGGCGTCTCGTACCTCCCCCTCAGCCACGTCGCCGGCCAGGTC
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