mRNA_Ecto-sp13_S_contig11962.1676.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: D7G3T1_ECTSI (Long chain acyl-coA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T1_ECTSI) HSP 1 Score: 525 bits (1353), Expect = 1.700e-182 Identity = 253/265 (95.47%), Postives = 260/265 (98.11%), Query Frame = 1
Query: 1 SVWATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQV 795
+VWATERDA+LPVK+GTAGAAARPAKTVFEVFQKAVENHGENPAL FKD SGG+SADDAPWQTL WAQYYMETLRFGKSLLSLDFAPH+CVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPE T+CGFPVYTWKQFMELGSKIPD KIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQ+
Sbjct: 4 TVWATERDADLPVKIGTAGAAARPAKTVFEVFQKAVENHGENPALMFKDTSGGMSADDAPWQTLTWAQYYMETLRFGKSLLSLDFAPHRCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEETECGFPVYTWKQFMELGSKIPDTKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQL 268
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A6H5KWQ0_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ0_9PHAE) HSP 1 Score: 462 bits (1190), Expect = 7.230e-158 Identity = 222/265 (83.77%), Postives = 240/265 (90.57%), Query Frame = 1
Query: 1 SVWATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQV 795
+VWATE A+LP+KMGT+GAAA+P TVF+VFQKAVENHGEN ALKFKD SGGVSADDAPWQTL WAQ+YMETLRFGKSL+SL FAPH+ +NIIGFNSTEWFIANMGAIAAGGI AGIYTSNLPEACQYITNHSEAEVVVVENEAQL KFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTW QFMELG +IPD I+ERIEAQ+PG+CCSLIYTSGTTG+PKAVMISHDNMTWTAETL F + R VSYLPLSH+A Q+
Sbjct: 4 TVWATEPHADLPIKMGTSGAAAKPPTTVFKVFQKAVENHGENVALKFKDTSGGVSADDAPWQTLTWAQFYMETLRFGKSLMSLGFAPHRSINIIGFNSTEWFIANMGAIAAGGIPAGIYTSNLPEACQYITNHSEAEVVVVENEAQLDKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWDQFMELGGEIPDSSIQERIEAQKPGECCSLIYTSGTTGKPKAVMISHDNMTWTAETLTTQFPLNETSRVVSYLPLSHIAAQI 268
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A835Z6J1_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J1_9STRA) HSP 1 Score: 318 bits (814), Expect = 2.580e-101 Identity = 149/265 (56.23%), Postives = 196/265 (73.96%), Query Frame = 1
Query: 7 WATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGN--VPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQV 795
W TE D +P++MG G AARP++T+ EVF+ A+ N G +PALK++ + G+ + PW TL W YY E+++F K+L+SL FAPH+CVNIIGFNS EWF+A MG I AGGIAAGIYT+NLPEAC+YI++HS+AEVVVVE QL K++ +A L +KAIV+Y GN + DC PVYTW F +LG + D ++EER+ Q+PG CC LIYTSGTTG PKAVM+SHDN+TWTA+T F++ +R +SYLPLSH+A Q+
Sbjct: 7 WVTEPDEVIPIRMGAEGVAARPSRTMCEVFKSALANFGTHPALKYQ--AEGI---EGPWSTLTWTDYYNESVKFAKTLMSLGFAPHRCVNIIGFNSVEWFVAEMGCILAGGIAAGIYTTNLPEACRYISDHSQAEVVVVEGALQLKKYISIAGQLKHLKAIVVY-GNETLAPVPDCPVPVYTWSDFQQLGKDVGDAQVEERMAGQQPGHCCCLIYTSGTTGTPKAVMLSHDNITWTAQTALMHFSFKIGDRSISYLPLSHIAAQI 265
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A4D9DBU9_9STRA (AMP-binding domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBU9_9STRA) HSP 1 Score: 288 bits (738), Expect = 4.640e-90 Identity = 140/242 (57.85%), Postives = 173/242 (71.49%), Query Frame = 1
Query: 76 KTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCA--PFNWSHAERGVSYLPLSHVAGQV 795
KTVF+VF++ V+ +G++PAL +K G S W + W +YY TL+F KSLLSL F H +N+IGFNS EW IAN GAIAAGG+ GIYTSN +AC+YIT HSEAEVVVVEN QL K++K+A L +KA+V+Y G EG C P+Y+WK FM LGS + D+ + RIEAQRPG CC+LIYTSGTTG PKAVMISHDN+TWT + A PF + +R VSYLPLSHVA Q+
Sbjct: 28 KTVFQVFEETVKKYGDSPALHYKKVPHGGSLATTEWSSYTWREYYDLTLKFCKSLLSLGFPAHGAINLIGFNSPEWLIANCGAIAAGGVGVGIYTSNGVDACKYITEHSEAEVVVVENAKQLEKYLKIAKELPRLKALVIYSGTA-EGYKCDVPIYSWKDFMALGSGVKDEAVRARIEAQRPGHCCTLIYTSGTTGPPKAVMISHDNLTWTVKNFVASLPFTLTCEDRSVSYLPLSHVAAQM 268
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: G9BBC7_9STRA (Long-chain acyl-coenzyme A synthetase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=G9BBC7_9STRA) HSP 1 Score: 284 bits (726), Expect = 2.760e-88 Identity = 142/263 (53.99%), Postives = 174/263 (66.16%), Query Frame = 1
Query: 13 TERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCA--PFNWSHAERGVSYLPLSHVAGQV 795
T + ++M G A +TV++VF++ V+ +G+ PAL FK G S + W W +YY TL F KSLL+LDF H +NIIGFNS EW IAN GAIAAGG+ GIYTSN EAC YI+ HSEAEVVVVEN QL K+VK+A L +KA+V+Y G EG C P+Y+WK FM LG + + RIEAQRPG CC+LIYTSGTTG PKAVMISHDN+TWT + A PF + +R VSYLPL HVA Q+
Sbjct: 7 TSASGEVDLRMEKEGPGAWEPRTVYQVFEETVQRYGDRPALHFKKVPHGGSPETTGWSVYAWREYYDLTLTFAKSLLALDFPAHGAINIIGFNSPEWLIANCGAIAAGGVGVGIYTSNNAEACNYISEHSEAEVVVVENAKQLEKYVKIAKNLPRLKALVVYDGT-GEGFTCDTPIYSWKAFMALGKDKSEAAVRARIEAQRPGHCCTLIYTSGTTGPPKAVMISHDNLTWTVKNFVAALPFTLTCEDRSVSYLPLPHVAAQM 268
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A7S2UWN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN0_9STRA) HSP 1 Score: 265 bits (678), Expect = 5.170e-83 Identity = 129/267 (48.31%), Postives = 173/267 (64.79%), Query Frame = 1
Query: 7 WATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFP----VYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHAERGVSYLPLSHVAGQV 795
W T+ A L + G AA +F+ F+++V++ G+ PAL FK+ S G A P+ + W +YY + + F K+L+SLDF PH NI+GFNS EWFI+ G +AAGGIAAGIY SN P+ CQYI++HSEAEVV++EN QL K+ ++A L +KA+V++ E T P + W FM+LG+ IPD+ + ERI+AQ+PG C L+YTSGTTG PKAVMISHDN TWT L F + VSYLPLSH+A Q+
Sbjct: 6 WTTDPKAELQPNLAETGLAANAPMVLFDFFRQSVKDFGDQPALFFKNISPGGDAASTPFSSYTWNEYYNQCITFAKALISLDFKPHTVSNIMGFNSKEWFISQFGTMAAGGIAAGIYPSNSPDQCQYISHHSEAEVVLLENNVQLEKYFQIANQLPKLKALVVWGEQPAEDTQKRLPGRVQLLHWDAFMQLGASIPDEMVNERIKAQKPGHCAVLVYTSGTTGPPKAVMISHDNATWTTTALAHSFPMDSNDITVSYLPLSHIAAQI 272
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A8K1FDL6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDL6_PYTOL) HSP 1 Score: 265 bits (678), Expect = 2.910e-81 Identity = 135/265 (50.94%), Postives = 169/265 (63.77%), Query Frame = 1
Query: 4 VWATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAE-TLCAPFNWSHAERGVSYLPLSHVAGQV 795
VW ++ A++ V+ G AAR TV E+F+K V+ G AL FK D W W QYY + F KSL+SL PH CVNIIG NS EWF N G IAAG + AGIYT+N PEAC YI+ H A+VVVVEN+ L K++K+A L S+KA+VM+ G VP C PVY ++ F++LG + D +EERI AQ PG CC+LIYTSGTTG PKAVMISHDN TWT+ L + + E+ VS+LPLSHVA Q+
Sbjct: 4 VWEADKIADIVVQSD--GIAARKPATVMEIFRKTVDRRGSGRALSFKK--------DGKWVAYTWKQYYQNCIHFAKSLISLGVQPHDCVNIIGHNSPEWFFTNNGTIAAGAVIAGIYTTNGPEACHYISEHCNAKVVVVENKHHLDKYLKIADQLPSLKALVMWDGEVPRDIICPVPVYGFRDFLKLGEDVDDAIVEERIAAQLPGHCCTLIYTSGTTGPPKAVMISHDNFTWTSYCVLDSLYGVDETEKSVSFLPLSHVAAQL 258
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A024U774_9STRA (AMP-binding domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U774_9STRA) HSP 1 Score: 249 bits (635), Expect = 9.020e-75 Identity = 123/266 (46.24%), Postives = 171/266 (64.29%), Query Frame = 1
Query: 16 ERDANLPVKMGTAGA-AARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFN-----WSHAERGVSYLPLSHVAGQV 795
+RD + +++G G AA+ TV +F+ V+ +GE+ AL S D W+ L W QYY + + F KSLL+L F P V+IIGFN+ EW I+++G I AGG+AAGIY++N +A +Y+ +HS A V+V +N QL K +A+ L +KA+V+Y VP T C PVY + F+ LG+ + D +E RI QRPG CC+LIYTSGTTG PKAVMISHDN+TWT +++ F ++H +R VSYLPLSHVA Q+
Sbjct: 10 KRDGEVKIRLGQEGTIAAKEPTTVVALFRDTVKKYGEDGAL--------YSKQDGEWKILTWNQYYAKCVAFAKSLLALGFDPFDAVSIIGFNAAEWMISDLGCILAGGLAAGIYSTNSADAAKYVADHSGARVIVCDNVPQLEKMASIASALPQLKALVVYNAPVPAATSCSVPVYAFDDFLNLGTAVDDAALEARIANQRPGHCCTLIYTSGTTGNPKAVMISHDNITWTLQSMVDLFATTGDPFTHVDRFVSYLPLSHVAAQL 267
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A6U1PAC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PAC9_9STRA) HSP 1 Score: 234 bits (597), Expect = 5.470e-74 Identity = 112/225 (49.78%), Postives = 151/225 (67.11%), Query Frame = 1
Query: 7 WATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAAT-LTSVKAIVMYRGNVPEGTD--CGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPK 672
W + D L K+GT+G + P TVF VF+ V HG+ ALKFK+ G A D + W+QYY E ++F ++L++L+F PH C+NIIGFN EWF+A GA+AAGGI AGIY +N P+AC+YI+ HS+AEVVV+E+ QL K++++ L +KA+V+Y EG G PVY W QF++LG +P + +EERI+AQ PG C SLIYTSGTTG PK
Sbjct: 6 WVCDPDGFLQPKVGTSGPESLPPSTVFAVFKDTVAKHGDKSALKFKEVGPGAEAADVEFSIWTWSQYYAEVIKFAQALVALNFPPHACLNIIGFNCKEWFVAQFGAMAAGGIPAGIYPTNGPDACKYISEHSKAEVVVLEDNKQLDKYLQIGPRKLPKLKALVVYNEEPLEGAGDRLGIPVYGWSQFIDLGKGVPAETVEERIQAQLPGHCNSLIYTSGTTGPPK 230
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Match: A0A444UXP9_ACIRT (Long-chain-fatty-acid--CoA ligase ACSBG2 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444UXP9_ACIRT) HSP 1 Score: 239 bits (611), Expect = 8.080e-74 Identity = 123/265 (46.42%), Postives = 165/265 (62.26%), Query Frame = 1
Query: 13 TERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPSGGVSADDAPWQTLNWAQYYMETLRFGKSLLSLDFAPHQCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPEACQYITNHSEAEVVVVENEAQLAKFVKLAATLTSVKAIVMYRGNVPEGTDCGFPVYTWKQFMELGSKIPDDKIEERIEAQRPGQCCSLIYTSGTTGQPKAVMISHDNMTWTAETLCAPFNWSHA----ERGVSYLPLSHVAGQV 795
T+ D + ++MG +G AA PA TV ++F + VE +G+ AL KD W L + +YY KS L L + V I+GFNS EWFIA++GAI AGG A GIYT+N PEACQY+ + +A V+VVEN QL K +++ L VKAI+ Y+ + E +YTW +FME+G+ +PD +++E I +Q+P QCC+LIYTSGTTGQPK VM+SHDN+TWTA HA E VSYLPLSH+A Q+
Sbjct: 41 TKEDGEVKLRMGDSGQAAEPAITVNQMFLQTVEQYGDQVALASKDGDN--------WNRLTYKEYYQRCRTAAKSFLKLGLERYHGVGILGFNSPEWFIADIGAILAGGFAVGIYTTNSPEACQYVAENCKANVLVVENHKQLQKILQIQDKLPHVKAIIQYKDALKEKKP---NLYTWAEFMEMGTDVPDSQLDEIIASQKPNQCCTLIYTSGTTGQPKGVMLSHDNITWTASATGKTVKLKHACEAQEVVVSYLPLSHIAAQM 294 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11962.1676.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11962.1676.1 >prot_Ecto-sp13_S_contig11962.1676.1 ID=prot_Ecto-sp13_S_contig11962.1676.1|Name=mRNA_Ecto-sp13_S_contig11962.1676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=265bp SVWATERDANLPVKMGTAGAAARPAKTVFEVFQKAVENHGENPALKFKDPback to top mRNA from alignment at Ecto-sp13_S_contig11962:699..4829+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11962.1676.1 ID=mRNA_Ecto-sp13_S_contig11962.1676.1|Name=mRNA_Ecto-sp13_S_contig11962.1676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4131bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11962:699..4829+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11962:699..4829+ >mRNA_Ecto-sp13_S_contig11962.1676.1 ID=mRNA_Ecto-sp13_S_contig11962.1676.1|Name=mRNA_Ecto-sp13_S_contig11962.1676.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=795bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11962:699..4829+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |