mRNA_Ecto-sp13_S_contig11950.1664.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: A0A6H5L4Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y0_9PHAE) HSP 1 Score: 321 bits (823), Expect = 4.160e-95 Identity = 174/191 (91.10%), Postives = 178/191 (93.19%), Query Frame = 1
Query: 7 RCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFTPPRGWFAGAPASTTPEAQERTGSHEDGNGDQQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVWWTRRFVREYLPPVSLDNPSLRQFLAQHGLA 579
+CKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSRED+TRALVGSLLDYDPFSDGSGIDGEEDGG RPLFIKADLYLYEFTPPRGWFAG PASTTPEAQER+GSHEDG+GDQQTT XXXXXXXXXXXXXXXXXXX E GVWWTRRFVREYLPPV LDNPSLRQFL QHGLA
Sbjct: 619 KCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDKTRALVGSLLDYDPFSDGSGIDGEEDGGRRPLFIKADLYLYEFTPPRGWFAGTPASTTPEAQERSGSHEDGDGDQQTTRVRETXXXXXXXXXXXXXXXXXXXGR-ERGVWWTRRFVREYLPPVGLDNPSLRQFLLQHGLA 808
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: D7G290_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G290_ECTSI) HSP 1 Score: 307 bits (786), Expect = 4.120e-90 Identity = 177/204 (86.76%), Postives = 180/204 (88.24%), Query Frame = 1
Query: 1 GFRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFTPPRGWFAGAPASTTPEAQERTGSHEDGNGDQQTTXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------EEGVWWTRRFVREYLPPVSLDNPSLRQFLAQHGLA 579
GFRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSR+DETR LVGSLLDYDPF+D SGIDGE+ GGGRPLFIKADLYLYEFTPPRGWFAG PASTTPEAQERTG HEDGNGD XXXXXXXXXXXXXXXXXXXXXXXXXXX E G WWTRRFVREYLPPV DNPSLRQFLAQHGLA
Sbjct: 566 GFRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSRKDETRTLVGSLLDYDPFADDSGIDGEDGGGGRPLFIKADLYLYEFTPPRGWFAGTPASTTPEAQERTGGHEDGNGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRETGAWWTRRFVREYLPPVGPDNPSLRQFLAQHGLA 769
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: A0A7D9IVA0_PARCT (Lipase maturation factor n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IVA0_PARCT) HSP 1 Score: 109 bits (273), Expect = 3.610e-24 Identity = 50/96 (52.08%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 4 FRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFT 291
F+CKPG+V RRPC+ISP HYRLDW +WFAAFQ Y+HNPWLV+L +KLL + SL+ ++PF +G P +I+A+ YLYEFT
Sbjct: 39 FKCKPGNVKRRPCLISPYHYRLDWLMWFAAFQNYQHNPWLVHLTAKLLVNDPGAT----SLIAHNPFENGP----------PPRYIRAEHYLYEFT 120
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: A0A7S2S376_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S376_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.860e-23 Identity = 65/192 (33.85%), Postives = 88/192 (45.83%), Query Frame = 1
Query: 4 FRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFTPPRGWFAGAPASTTPEAQERTGSHEDGNGDQQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVWWTRRFVREYLPPVSLDNPSLRQFLAQHGLA 579
F+CKPG+VDR PC+ISP H+RLDW +WFA FQ+Y+ NPWL++L+ K+L+ + E A LL DPF G P F++A Y Y F P R A + T D + D+ G WW R F +PP+ + S+R FL +GLA
Sbjct: 80 FQCKPGNVDRMPCLISPFHFRLDWLMWFAGFQSYQSNPWLIHLMEKILTGKPEGTA----LLAEDPFQ----------GQDPPTFVRAVRYRYTFAPRRA------------AVKATNGRNDISRDR--------------------------------GRWWEREFKGVLVPPIGHGDSSVRMFLQHNGLA 213
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: A0A150QYQ6_SORCE (Uncharacterized protein n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150QYQ6_SORCE) HSP 1 Score: 114 bits (285), Expect = 7.040e-23 Identity = 71/188 (37.77%), Postives = 88/188 (46.81%), Query Frame = 1
Query: 10 CKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFTPPRGWFAGAPASTTPEAQERTGSHEDGNGDQQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVWWTRRFVREYLPPVSLDNPSLRQFLAQHG 573
CKPGDV RRPC+I+P HYRLDWQ+WFAAF +Y PWLV+LV KLLS + + L+ S +PF D P +I+A LY Y FT R G DG+ G WW R V EYLPP+S+D+PSL +FLA +G
Sbjct: 429 CKPGDVRRRPCLITPYHYRLDWQIWFAAFGSYESEPWLVHLVYKLLSGDAGAQRLLAS----NPFPDAP-----------PRYIRAGLYRYSFT-------------------RIG---DGS-----------------------------------GAWWRRVRVAEYLPPLSVDDPSLLRFLAAYG 544
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: A0A3L8S0T7_CHLGU (Lipase maturation factor n=1 Tax=Chloebia gouldiae TaxID=44316 RepID=A0A3L8S0T7_CHLGU) HSP 1 Score: 105 bits (262), Expect = 1.470e-22 Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 4 FRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFTPPRGWFAG 315
F+CKPGD+ RRPC ISP HYRLDW +WFAAFQTY N W+++L KLL++E+ET SLL +PF+ G P +I+ + + Y+F+ P G AG
Sbjct: 49 FKCKPGDLRRRPCFISPYHYRLDWLMWFAAFQTYEQNEWIIHLAGKLLAQEEETL----SLLATNPFA----------GRDPPRWIRGEHFKYKFSQPGGKHAG 138
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: A0A8B7YM60_ACAPL (Lipase maturation factor n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YM60_ACAPL) HSP 1 Score: 113 bits (282), Expect = 1.930e-22 Identity = 63/179 (35.20%), Postives = 85/179 (47.49%), Query Frame = 1
Query: 4 FRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFTPPRGWFAGAPASTTPEAQERTGSHEDGNGDQQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVWWTRRFVREYLPPVSLDN 540
F+CKPG+V RRPC+ISP HYRLDW +WFAAFQ+Y NPWLV+L K L + V SL+ ++PF DG P F++A Y Y++T + GS + +EG WW+R+F+R YLPPVSL++
Sbjct: 450 FKCKPGNVTRRPCLISPYHYRLDWLMWFAAFQSYESNPWLVHLAGKFLYNDKG----VTSLVAHNPFKDGD----------PPRFVRALHYRYQYT-------------------KIGSQQS-----------------------------------QEGAWWSRKFLRSYLPPVSLES 560
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: A0A1G1K432_9BACT (Uncharacterized protein n=2 Tax=unclassified Candidatus Omnitrophica TaxID=1047005 RepID=A0A1G1K432_9BACT) HSP 1 Score: 112 bits (279), Expect = 2.230e-22 Identity = 70/188 (37.23%), Postives = 90/188 (47.87%), Query Frame = 1
Query: 4 FRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFTPPRGWFAGAPASTTPEAQERTGSHEDGNGDQQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVWWTRRFVREYLPPVSLDNPSLRQFLAQ 567
F+ KPGD R PC++SP H++LDWQ+WFAA YR++PW++NL +KLL + RA V LL +PFSD P FI+A+LY Y FT GA E + RTG+ WW RR V EYLPP+SLDNPS ++ L Q
Sbjct: 367 FKGKPGDPKRPPCIVSPYHWKLDWQMWFAAMSDYRYHPWILNLTAKLLKGD---RA-VSKLLAENPFSDSP-----------PKFIRAELYEYHFT-------GA------EEKTRTGN------------------------------------------WWWRRRVGEYLPPLSLDNPSFQEALRQ 484
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: A0A534X7S5_9DELT (Lipase maturation factor family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534X7S5_9DELT) HSP 1 Score: 112 bits (279), Expect = 2.750e-22 Identity = 69/190 (36.32%), Postives = 85/190 (44.74%), Query Frame = 1
Query: 4 FRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFTPPRGWFAGAPASTTPEAQERTGSHEDGNGDQQTTXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGVWWTRRFVREYLPPVSLDNPSLRQFLAQHG 573
F+CKPGDV RRPCV++P R+DWQ+WFAA T PW ++LV KLL D+ AL SLL +PF D P ++A LY YEF PP G P+ G WW R VRE+LPP+S D+P LR+FLA HG
Sbjct: 387 FKCKPGDVMRRPCVVAPYQERIDWQIWFAAMSTPERYPWTLHLVWKLL--HDDPGAL--SLLATNPFPDAP-----------PRHVRARLYRYEFAPP-----GDPS----------------------------------------------------GAWWRRTLVREWLPPLSADDPHLRRFLAAHG 504
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Match: A0A7J7KAU3_BUGNE (Lipase maturation factor n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7KAU3_BUGNE) HSP 1 Score: 103 bits (258), Expect = 4.320e-22 Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 1
Query: 4 FRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSREDETRALVGSLLDYDPFSDGSGIDGEEDGGGRPLFIKADLYLYEFT 291
F+CKPG+V +RPC+ISP HYRLDW +WFAAFQ Y+HNPWL++ V+KLL+ + L L+D +PF+ G P +I+ + Y YE++
Sbjct: 48 FKCKPGNVTKRPCLISPYHYRLDWLMWFAAFQNYQHNPWLIHFVAKLLANDQ----LAVELIDVNPFA----------GKSPPKYIRLEHYRYEYS 129 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11950.1664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11950.1664.1 >prot_Ecto-sp13_S_contig11950.1664.1 ID=prot_Ecto-sp13_S_contig11950.1664.1|Name=mRNA_Ecto-sp13_S_contig11950.1664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp GFRCKPGDVDRRPCVISPLHYRLDWQVWFAAFQTYRHNPWLVNLVSKLLSback to top mRNA from alignment at Ecto-sp13_S_contig11950:1990..5198- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11950.1664.1 ID=mRNA_Ecto-sp13_S_contig11950.1664.1|Name=mRNA_Ecto-sp13_S_contig11950.1664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3209bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11950:1990..5198- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11950:1990..5198- >mRNA_Ecto-sp13_S_contig11950.1664.1 ID=mRNA_Ecto-sp13_S_contig11950.1664.1|Name=mRNA_Ecto-sp13_S_contig11950.1664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=582bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11950:1990..5198- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |