mRNA_Ecto-sp13_S_contig11930.1646.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: D8LF83_ECTSI (Putative respiratory burst oxidase homolog protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF83_ECTSI) HSP 1 Score: 459 bits (1180), Expect = 1.020e-155 Identity = 230/238 (96.64%), Postives = 231/238 (97.06%), Query Frame = 1
Query: 1 LGTDFGFLTLVAGWAHGVLHLARVSYAGEKFLMYETHAFRSGIFAILVLLPIVLPMRFSFFRKKMTFQFRKRMHMLFLTMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVASRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDNAVLLICTGAGITPAVAVADR 714
L T FGFLTLVAGWAHGVLHLARVSYA EKFLMYETHAFRSGIFAIL+LLPIVLPMRFSFFR KMTFQFRKRMHMLFL MLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGV SRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDN VLLICTGAGITPAVAVADR
Sbjct: 212 LHTYFGFLTLVAGWAHGVLHLARVSYADEKFLMYETHAFRSGIFAILLLLPIVLPMRFSFFRNKMTFQFRKRMHMLFLVMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVTSRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDN-VLLICTGAGITPAVAVADR 448
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: A0A6H5JHI2_9PHAE (FAD-binding FR-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI2_9PHAE) HSP 1 Score: 244 bits (624), Expect = 1.090e-71 Identity = 124/270 (45.93%), Postives = 165/270 (61.11%), Query Frame = 1
Query: 1 LGTDFGFLTLVAGWAHGVLHLARVSYAGEKFLMYETHAFRSGIFAILVLLPIVLPMRFSFFRKK--------------------------------MTFQFRKRMHMLFLTMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVASRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDNAVLLICTGAGITPAVAVADR 714
L T FG L L+ H H+A + +E RSG+ A+L+LLPI LPM + K +TF+ RK +H+LF+ ++A+CFH + + +ILL WYL+D YF TK TFL+S P Y+ +GRGT+V +LP GY +K G+Y+ VNCPAI +EWHPFSL PVPG RA F+ EAVGDWT ++FR L NP PLWITAAQPS++E T++++N VLL+CTGAGITPAV+VA+R
Sbjct: 309 LHTYFGVLILLCSVVHSACHIAVGALQRRADYAFENEINRSGVVAMLLLLPIALPMTMRLAKAKVPEEVYRSLAPTGFSLPRVVARCFARDNETPQLTFEVRKYLHLLFMPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGPRPRAGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVMEKTVYFEN-VLLVCTGAGITPAVSVAER 577
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: D7G8C8_ECTSI (Putative respiratory burst oxidase protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C8_ECTSI) HSP 1 Score: 234 bits (596), Expect = 8.770e-68 Identity = 109/218 (50.00%), Postives = 147/218 (67.43%), Query Frame = 1
Query: 1 LGTDFGFLTLVAGWAHGVLHLARVSYAGEKFLMYETHAFRSGIFAILVLLPIVLPMRFSFFRKKMTFQFRKRMHMLFLTMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVASRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDN 654
L T FG L L+ H V H+A + ++ RSG+ A+L+LLPI LPM + K+TF+ RK +H+LF+ ++A+CFH + + +ILL WYL+D YF TK TFL+S P Y+ +GRGT+V +LP GY +K G+Y+ VNCPAI +EWHPFSL PVPG RA F+ EAVGDWT ++FR L NP PLWITAAQPS++E T+++DN
Sbjct: 329 LHTYFGVLILLCSVVHSVCHIAVGALQRRADHAFKDEINRSGLVAVLLLLPIALPMTMRLAKTKLTFEARKYLHLLFIPFMIAVCFHGRALQILGAILLAWYLLDRLYFTTKMTFLLSSPVYKPVGRGTLVRFELPPGYQYKPGAYVQVNCPAISVSEWHPFSLFPVPGSRPRAGFHVEAVGDWTNEMFRFCLENPQMPLWITAAQPSVVEKTMYFDN 546
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: A0A6H5JEC1_9PHAE (FAD_binding_8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEC1_9PHAE) HSP 1 Score: 227 bits (578), Expect = 1.100e-67 Identity = 110/218 (50.46%), Postives = 144/218 (66.06%), Query Frame = 1
Query: 1 LGTDFGFLTLVAGWAHGVLHLARVSYAGEKFLMYETHAFRSGIFAILVLLPIVLPMRFSFFRKKMTFQFRKRMHMLFLTMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVASRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDN 654
L T FG LTL+ G HG+ HLAR G + + + RSG A+++L PI +PM +K MTF+FRK +HMLF+ +VA+CFH V +A IL+ WYL+D YF T+ F + + +GR T+V DLP GY F GSYI VNCPAI EWHPFS+ PVPG R FY EAVGDWT++LFRL L +P PLWITAAQPS++E +++++N
Sbjct: 318 LHTFFGSLTLLFGVLHGLAHLAREVNEGN-WNFFASPMGRSGFVALVLLFPIAVPMLLGRPKKLMTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRMHFCIERAVFRPVGRATLVRFDLPPGYQFNVGSYIQVNCPAISAKEWHPFSMFPVPGPRPRGGFYVEAVGDWTQELFRLSLEDPCMPLWITAAQPSVLEKSVYFEN 534
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: D7G8C4_ECTSI (Putative respiratory burst oxidase homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8C4_ECTSI) HSP 1 Score: 221 bits (563), Expect = 1.250e-64 Identity = 115/237 (48.52%), Postives = 150/237 (63.29%), Query Frame = 1
Query: 1 LGTDFGFLTLVAGWAHGVLHLARVSYAGEKFLMYETHAFRSGIFAILVLLPIVLPMRFSFFRKKMTFQFRKRMHMLFLTMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRGTMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVASRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDNAVLLICTGAGITPAVAVAD 711
L T FG LTL+ G HG+ HLAR G + + + RSG A+++L PI +PM +K MTF+FRK +HMLF+ +VA+CFH V +A IL+ WYL+D YF T+ GY FK GSYI VNCPAI EWHPFS+ PVPG R FY EAVGDWT++LFRL L +P PLWITAAQPS++E +++++N V+++CTGAGITPA+ +AD
Sbjct: 109 LHTYFGSLTLLFGVLHGLAHLAREVNEGH-WNCFASSMGRSGFIALVLLFPIAVPMLLGRPKKLMTFEFRKALHMLFIPFMVAMCFHGKVLAVLAGILVAWYLVDRTYFTTRI------------------------GYQFKVGSYIQVNCPAISAKEWHPFSMFPVPGPRPRGGFYVEAVGDWTQELFRLSLDDPCMPLWITAAQPSVLEKSVYFEN-VIMVCTGAGITPAICLAD 319
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: D7G8D0_ECTSI (Putative respiratory burst oxidase homolog protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D0_ECTSI) HSP 1 Score: 120 bits (302), Expect = 1.150e-31 Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 1
Query: 412 GYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVASRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQPSLIETTLFYDNAVLLI 669
GY ++ G+Y+ VNCPAI +EWHPFSL PVPG RA + EAVGDWT +LFRL L +P PLWITAAQPS+ E +++DN ++++
Sbjct: 5 GYKYQPGAYVQVNCPAISVSEWHPFSLFPVPGPNPRAGLHVEAVGDWTNELFRLSLEHPRMPLWITAAQPSVAEQAVYFDNGMMML 90
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: D7G8D1_ECTSI (Putative respiratory burst oxidase homolog protein C-ter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D1_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 1.090e-13 Identity = 38/109 (34.86%), Postives = 62/109 (56.88%), Query Frame = 1
Query: 13 FGFLTLVAGWAHGVLHLARVSYAGEKFLMYETHAFRSGIFAILVLLPIVLPMRFSFFRKKMTFQFRKRMHMLFLTMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQ 339
FG L ++ H H+ + + SG+ A L++LP+ LPM ++++TF+ RK +HMLF+ +VALCFH + + ++LL+WYL+D FYF T+
Sbjct: 54 FGILAMLCSAIHSACHVVIGILQRRPHHVVKDEMNLSGLVAFLLVLPVALPMSVGCLKERVTFETRKYLHMLFIPFMVALCFHGTRLKALGAVLLVWYLLDRFYFTTRM 162
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: A0A7X2FRE5_9PROT (Ferric reductase n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FRE5_9PROT) HSP 1 Score: 68.9 bits (167), Expect = 8.630e-10 Identity = 55/241 (22.82%), Postives = 100/241 (41.49%), Query Frame = 1
Query: 16 GFLTLVAGWAHGVLHLARVSYAGEKF--LMYETHAFRSGIFAILVLLPIVLPMRFSFFRKKMTFQFRKRMHMLFLTMLVALCFHSVVFRYVASILLLWYLIDNFYFITKQTFLVSHPTYEAIGRG-TMVGIDLPEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVASRAAFYAEAVGDWTKDLFRLGLANPS-QPLWITAAQPSLIE-------TTLFYDNAVLLICTGAGITPAVAV 705
G + + H HL S E ++ T A +G+ V + ++ F R+ F+ H F+ FH F + + Y+I+ + + + EA+ T + + LP+G+ ++ G Y+++ P I EWHPF++ P + + + +G+WT+ L L A + Q +LI+ T++F V+LI G G+TP A+
Sbjct: 338 GHVMMAFALVHTAAHLVNYSSLPESMGHYLFSTQAGLTGVLLTAVFV-VMWVCAMDFIRRGGHFELFYFTHFFFILWFGFALFHGPSFWQWVLLPVAGYVIERIVRTVRTSRKMPVTAIEALPSSVTRLQLQLPDGFRYQPGDYVFIRYPQISGHEWHPFTVTTCPEETGKLSVHVRGLGNWTRKLHELAKARAAGQAAPKAGLDYALIDGPYGTPSTSIFKSTNVVLIGAGIGVTPFAAI 577
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: A0A022QLZ0_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QLZ0_ERYGU) HSP 1 Score: 68.2 bits (165), Expect = 1.660e-9 Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = 1
Query: 406 PEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVASRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAAQ------------PSLIETTLF------YDN--AVLLICTGAGITPAVAV 705
P G+ +K+G Y+++ CPAI EWHPFSL PG + + + VGDWTK+L R+ N S I A+ P L+ + Y N +LL+ G G TP +++
Sbjct: 613 PNGFKYKSGQYVFLQCPAISSFEWHPFSLTSAPG-DNYLSVHIRTVGDWTKELKRVFTENNSSTSVIGRAKFGSLGNVNQAGLPKLLVDGPYGAPAQAYQNYDVLLLVGLGIGATPFISI 731
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Match: A0A4Y7JK72_PAPSO (FAD-binding FR-type domain-containing protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JK72_PAPSO) HSP 1 Score: 67.0 bits (162), Expect = 2.140e-9 Identity = 39/120 (32.50%), Postives = 57/120 (47.50%), Query Frame = 1
Query: 406 PEGYTFKAGSYIYVNCPAIDRAEWHPFSLIPVPGVASRAAFYAEAVGDWTKDLFRLGLANPSQPLWITAA---QPSLIETTLF---------------YDN--AVLLICTGAGITPAVAV 705
P+G+ +K+G YI++ CP I EWHPFS+ PG + + VGDWT++L R+ S P I A QP I+ Y N +LL+ G G TP +++
Sbjct: 115 PQGFKYKSGQYIFLQCPTISSFEWHPFSITSAPG-DDYLSVHIRTVGDWTQELMRVFTETCSSPNHIGLAKFGQPGRIDQRSLPRLSVDGPYGAPAQDYRNYDVLLLVGLGIGATPFISI 233 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11930.1646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11930.1646.1 >prot_Ecto-sp13_S_contig11930.1646.1 ID=prot_Ecto-sp13_S_contig11930.1646.1|Name=mRNA_Ecto-sp13_S_contig11930.1646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=239bp LGTDFGFLTLVAGWAHGVLHLARVSYAGEKFLMYETHAFRSGIFAILVLLback to top mRNA from alignment at Ecto-sp13_S_contig11930:107..5088- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11930.1646.1 ID=mRNA_Ecto-sp13_S_contig11930.1646.1|Name=mRNA_Ecto-sp13_S_contig11930.1646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4982bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11930:107..5088- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11930:107..5088- >mRNA_Ecto-sp13_S_contig11930.1646.1 ID=mRNA_Ecto-sp13_S_contig11930.1646.1|Name=mRNA_Ecto-sp13_S_contig11930.1646.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=717bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11930:107..5088- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |