mRNA_Ecto-sp13_S_contig11926.1640.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: D8LN44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN44_ECTSI) HSP 1 Score: 606 bits (1562), Expect = 1.590e-214 Identity = 302/317 (95.27%), Postives = 305/317 (96.21%), Query Frame = 1
Query: 1 RRALVPASGAQEDLHKSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
RRALVPASGAQE LHKSGGVLLAVELAS APDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQAS VRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAW+SPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHP+DDDNG GDASGAEPGGVGVRGG SDGNRGEETGHMWVCTFSGSR+DKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREF ANKQ
Sbjct: 143 RRALVPASGAQEGLHKSGGVLLAVELASGAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQAS-------VRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWNSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPSDDDNGDGDASGAEPGGVGVRGGDSDGNRGEETGHMWVCTFSGSRADKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFLANKQ 452
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A7S1TR63_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR63_9STRA) HSP 1 Score: 197 bits (502), Expect = 4.210e-56 Identity = 123/300 (41.00%), Postives = 158/300 (52.67%), Query Frame = 1
Query: 67 AVELASAAPDSIVHPVGGILHLRLEVVAPPEVSA---FPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDK--KAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
AVELA+A PDS++H G+LHLR+EV A + PF DV ++ A ++ R FYLYA WW F++ +L++R V +FA DE G HR VCSF+ P R GR+L +P+ AARFV+LLPF VG + A Q WHSP AFLA GD DHA+LLCSLLLGFGLDA V G + + + + +GAEP V H WV TFS + K FWESLTGQR+ + + K P + V +F+ F ANKQ
Sbjct: 22 AVELAAAGPDSVLHGSAGLLHLRMEVEAGGDADVEIEMPFTKRDVEEAVEKTARSG-------ADRARAFYLYARRWWADFTAIDPLLAQRRVALFAADEAGGHRSVCSFVAPLRAGRLLASPQDAARFVALLPFERAFGVGLR--ARQETWHSPAAFLARRAGDVEDHAVLLCSLLLGFGLDAYVAVGTIRGDKVISAENETTGAEPEDV--------------RDHAWVVTFSRTADGVGLKVSFWESLTGQRYTLGS--------------KTRSHP--YVSVGSVFSDTSFHANKQ 282
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A7S2S781_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S781_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.820e-49 Identity = 118/307 (38.44%), Postives = 158/307 (51.47%), Query Frame = 1
Query: 40 LHKSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEAR--RDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPR-HFSKVSCMFNHREFFANKQ 951
L K+GG + VEL P + V G+L LRL++V P D + ++ + R+ AR R F YA WWK + T++ R VKIF E+E G+H C+ + P R GR+L +PRHAARFVSLLP+ +VG WH+ H+ L GD DHALLLCS LLGFGLDA VC GL+ DD+N PGG E H+WV + SG +++++ +FWESLTGQ R+T G+ P + +V C+FNHR F+ANKQ
Sbjct: 271 LCKNGGASVVVELRGIGPTAKVRIPVGMLDLRLDLV--------PSVVGDTSVLLSERDVDMTLETESRAIARSHRRFCEYARVWWKEYIETNQSFRGRCVKIFVENEWGEHVPACTMVRPLRAGRLLDSPRHAARFVSLLPYIHEESVGG---GRLEIWHTVHSILCRRQGDVEDHALLLCSFLLGFGLDAYVCIGLID--DDEN---------PGG--------------EKEHVWVVSLSG-KANRQVLFWESLTGQTL-----------DRQTLVGRDGAKPNCPYRRVDCVFNHRTFYANKQ 529
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A2R5GMW5_9STRA (Centrosomal protein of 76 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMW5_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.050e-45 Identity = 112/301 (37.21%), Postives = 146/301 (48.50%), Query Frame = 1
Query: 49 SGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
SG +AVEL + + V GIL LRLE+V P D + +A+ + +A R F YA AWW+ F R VKIFAE+E G H V +F+ P R GR+L + RHAARFVSL+P+ VG + WH H FL+ G GD DHA+LLC+LLLGFGL+A VC G V + + EP E H+W T SG + ++ FWESLTG R M APR R + + +++C FNH F+ANKQ
Sbjct: 234 SGAATVAVELHATGEAAKVRVPAGILDLRLELVP---ARPGPSPLTDEKLLTSLRANTK-----QAGQAYRQFCEYARAWWEEFVELDDRFRHRLVKIFAENEWGDHEPVFAFVRPMRAGRLLASARHAARFVSLIPYTREEMVGG---SRLEVWHVAHTFLSKGRGDCEDHAVLLCNLLLGFGLNAFVCMGTVQDSPE----------EP----------------ERDHVWCMTLSG-KDNRTCTFWESLTGHRVVM-APR------RDVESAAQTALRQSYRRIACAFNHESFYANKQ 489
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A7R9UA61_9STRA (Centrosomal protein of 76 kDa (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA61_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.280e-45 Identity = 110/302 (36.42%), Postives = 152/302 (50.33%), Query Frame = 1
Query: 61 LLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSA---FPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSD--KKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
+ AVEL +A PDS++ GGILHLR+E+ A + PF + ++ +D A A+ R+ A F LYA WW +++ ++ +R +FA DE G HR VCSF+ P R R+L +P+ AARFVSL+PF VG + WH+ AFL+ G GD DHA+LLCSLLLGFGLDA V G + + + + + H WV TF+ + K FWESLTGQR+ + + R+ P + V C+FN FF NKQ
Sbjct: 189 VFAVELIAAGPDSVLQGTGGILHLRMELQAGGDSETQIELPFTSKEIEESVDKTAKD----AANRTRA---FVLYARRWWAEYTNIDPLIDQRRTCLFAADEAGGHRSVCSFVSPVRAERLLHSPQDAARFVSLIPFERSYGVGVR--KRHETWHNACAFLSRGAGDVEDHAVLLCSLLLGFGLDAYVVLGTIRGDRVLTAENETAKQIDD--------------QARDHAWVVTFARTADSVGMKVSFWESLTGQRYELGSKH-------RSHP---------YVSVGCVFNDAAFFGNKQ 451
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A6P4Z5V2_BRABE (Centrosomal protein of 76 kDa n=6 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Z5V2_BRABE) HSP 1 Score: 172 bits (437), Expect = 2.650e-45 Identity = 117/303 (38.61%), Postives = 153/303 (50.50%), Query Frame = 1
Query: 46 KSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRH-FSKVSCMFNHREFFANKQ 951
+ G + AVEL +S V PVG +L +RLE++ P + P D +T ++ + S+R +E R F +YA WW+ F S R VKIFA+DE +R VCSF+ P + GR+L TPR AARF+SLL + STVG P A Q W + HAFL GD DH++LLCSLLLGFGLDA VC G T +N T H WV T D +A FWESLTG R++ P P P++ + V C+FNH+ F+AN Q
Sbjct: 230 QDGYINTAVELMGVGTESKV-PVG-VLDVRLEILPHPVQTLAP---DVITTQLNLEQSRR-------AERERLFLVYAKQWWREFLQIRGTNSSRLVKIFAQDENATNRPVCSFVRPLQAGRLLDTPRQAARFISLLTYEKASTVGGGPRAEQ--WCTMHAFLCRNKGDCEDHSVLLCSLLLGFGLDAYVCVG----TKTNN---------------------------TAHTWVLTLG---MDGEATFWESLTGHRYSHQPINPD------DPPTVEQPRPQYPYRSVGCVFNHQVFYANSQ 478
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: UPI0001CBA812 (centrosomal protein of 76 kDa n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA812) HSP 1 Score: 162 bits (410), Expect = 1.580e-41 Identity = 109/302 (36.09%), Postives = 148/302 (49.01%), Query Frame = 1
Query: 49 SGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRH-FSKVSCMFNHREFFANKQ 951
SG + + VEL ++ V P+G +L LRLE++ P K D +T + + ++ +E R F +YA WW+ + + R VKIFA+DE G +R VCS++ P R GR+L TPR AARF+S + + STVG A W S HAFL GD DHA+LLCSLL+GFGL+A VC G + + T H WV T S +D FWESLTGQR+ A P P P++ + V C+FNH+ F+AN Q
Sbjct: 228 SGRMNIPVELLGVGTEAKV-PIG-VLELRLELIPIPTQM---LKEDIITAQVALERNRT-------AERERLFLVYAKQWWREYLQIRPSHNNRLVKIFAQDESGTNRPVCSYVRPLRAGRLLDTPRQAARFISAIGYERTSTVGSGG-AKAEIWTSMHAFLCKNKGDCEDHAVLLCSLLIGFGLNAYVCVG-------------------------------TKTKGTAHAWVMTIS---TDGLVTFWESLTGQRYIHQAINPN------DPPAIAQPQPQYPYRTVGCVFNHQVFYANSQ 476
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A7S3ZYI7_9STRA (Centrosomal protein of 76 kDa n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYI7_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.830e-41 Identity = 113/301 (37.54%), Postives = 147/301 (48.84%), Query Frame = 1
Query: 70 VELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSS-TSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTF------SGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
+ L +A PD + V L + L+VVA PF+ DDV M A S +EA R FYLYA WW GF+ + L +R VK+FA DE G+ RCVCS++ P R R+L P AARFVSLLP +V WH+P A A G+GD DHA LLCSLL G+GLDA VC G + +G+G GA+P H+WV TF + R+ + WES TG+R ++ AP +R R + V+C+F F ANKQ
Sbjct: 209 IALKAAGPDGVDGEVA-TLDVALDVVAVGGALDLPFQPDDVEDAMRK-------ARSEHAEAARAFYLYAKQWWDGFAKGAGRDLQQREVKLFARDEAGEMRCVCSYVHPLRANRVLDGPHQAARFVSLLPLEKAGSVAG---GNADTWHTPLATCARGSGDVWDHATLLCSLLRGYGLDARVCVGSMS-----DGRG---GAQP-------------------HVWVATFLRTSVDASGRARLRVTAWESATGRRCSL-APLDAQARER-------------YLSVACVFGDDSFHANKQ 457
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A835ZHM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM4_9STRA) HSP 1 Score: 152 bits (384), Expect = 8.160e-39 Identity = 115/331 (34.74%), Postives = 149/331 (45.02%), Query Frame = 1
Query: 1 RRALVPASGAQEDLHKSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWK-----GFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLE-----PYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRA--WHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASG-AEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRH-FSKVSCMFNHREFFANKQ 951
RR LV A L VE+ +AA G L RL++VA P + P A V +M A+ RS AR DFYLY WW G + ++ + +V++FA DERG+ RCVCSFL GR++ +PRHAAR V+L+P+ R VG W S H FLA G A++HALLL +LL GFGLDA VC G + D G A+P R H WV T+ G + ++ FWE LTG R A P H F +SC+FN + +ANKQ
Sbjct: 6 RRELVGACALDWRAALVSDAALEVEV-TAAXXXXXXXXAGALRCRLDLVASPADAMVPLAAPTVELLMSNAH------AAARSRAR-DFYLYCQRWWDELAQAGPAQSAHAANDSNVRLFAVDERGRRRCVCSFLPRAAATAAATGRLVHSPRHAARIVNLIPYAARRGVGXXXXXXXXXAQWLSAHTFLAQRRGGAAEHALLLAALLCGFGLDAYVCLGEIRDDDXXXXXXXXXGDAQP-------------RRSSRAHAWVATYFGPHAAQRVTFWEPLTGARVA---------------------APAHPFVTLSCVFNAQSLYANKQ 294
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A2G8L1X5_STIJA (Putative centrosomal protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L1X5_STIJA) HSP 1 Score: 154 bits (388), Expect = 1.170e-38 Identity = 107/295 (36.27%), Postives = 143/295 (48.47%), Query Frame = 1
Query: 70 VELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRH-FSKVSCMFNHREFFANKQ 951
VEL ++ V PVG I+ ++LEV+ P+ +++V A++ S SE R F +YA WWK + + R VKIFA+DE +R VC +++P R GR+L TPR AARF+S++ F STVG P Q W+S HAFL GD DHA+LLC+L LGFGL+A VC G V+G H WV T S D FWESL+G R+ P P P++ F + C+FNHR F+AN Q
Sbjct: 223 VELMGIGEENKV-PVG-IIEVKLEVLPIPQ----QILSNEVI------ATQVNLERSRVSERERLFLVYAKQWWKEYLQIRETHQNRLVKIFAQDENAANRFVCLYVKPLRAGRLLDTPRQAARFISVIGFERSSTVGGGQPKEQ--WNSSHAFLCKNRGDCEDHAILLCNLFLGFGLNAFVCVGTK---------------------VKG----------AAHTWVVTIS---PDGLVTFWESLSGHRYIHQPVNPD------DPPSVQLPRPQYPFRTIGCIFNHRTFYANCQ 463 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11926.1640.1 >prot_Ecto-sp13_S_contig11926.1640.1 ID=prot_Ecto-sp13_S_contig11926.1640.1|Name=mRNA_Ecto-sp13_S_contig11926.1640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp RRALVPASGAQEDLHKSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAback to top mRNA from alignment at Ecto-sp13_S_contig11926:780..4992+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11926.1640.1 ID=mRNA_Ecto-sp13_S_contig11926.1640.1|Name=mRNA_Ecto-sp13_S_contig11926.1640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11926:780..4992+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11926:780..4992+ >mRNA_Ecto-sp13_S_contig11926.1640.1 ID=mRNA_Ecto-sp13_S_contig11926.1640.1|Name=mRNA_Ecto-sp13_S_contig11926.1640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11926:780..4992+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |