mRNA_Ecto-sp13_S_contig11926.1640.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11926.1640.1
Unique NamemRNA_Ecto-sp13_S_contig11926.1640.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: D8LN44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN44_ECTSI)

HSP 1 Score: 606 bits (1562), Expect = 1.590e-214
Identity = 302/317 (95.27%), Postives = 305/317 (96.21%), Query Frame = 1
Query:    1 RRALVPASGAQEDLHKSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
            RRALVPASGAQE LHKSGGVLLAVELAS APDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQAS       VRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAW+SPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHP+DDDNG GDASGAEPGGVGVRGG SDGNRGEETGHMWVCTFSGSR+DKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREF ANKQ
Sbjct:  143 RRALVPASGAQEGLHKSGGVLLAVELASGAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQAS-------VRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWNSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPSDDDNGDGDASGAEPGGVGVRGGDSDGNRGEETGHMWVCTFSGSRADKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFLANKQ 452          
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A7S1TR63_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR63_9STRA)

HSP 1 Score: 197 bits (502), Expect = 4.210e-56
Identity = 123/300 (41.00%), Postives = 158/300 (52.67%), Query Frame = 1
Query:   67 AVELASAAPDSIVHPVGGILHLRLEVVAPPEVSA---FPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDK--KAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
            AVELA+A PDS++H   G+LHLR+EV A  +       PF   DV   ++  A          ++  R FYLYA  WW  F++   +L++R V +FA DE G HR VCSF+ P R GR+L +P+ AARFV+LLPF     VG +  A Q  WHSP AFLA   GD  DHA+LLCSLLLGFGLDA V  G +      + + + +GAEP  V                H WV TFS +      K  FWESLTGQR+ + +              K    P  +  V  +F+   F ANKQ
Sbjct:   22 AVELAAAGPDSVLHGSAGLLHLRMEVEAGGDADVEIEMPFTKRDVEEAVEKTARSG-------ADRARAFYLYARRWWADFTAIDPLLAQRRVALFAADEAGGHRSVCSFVAPLRAGRLLASPQDAARFVALLPFERAFGVGLR--ARQETWHSPAAFLARRAGDVEDHAVLLCSLLLGFGLDAYVAVGTIRGDKVISAENETTGAEPEDV--------------RDHAWVVTFSRTADGVGLKVSFWESLTGQRYTLGS--------------KTRSHP--YVSVGSVFSDTSFHANKQ 282          
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A7S2S781_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S781_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.820e-49
Identity = 118/307 (38.44%), Postives = 158/307 (51.47%), Query Frame = 1
Query:   40 LHKSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEAR--RDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPR-HFSKVSCMFNHREFFANKQ 951
            L K+GG  + VEL    P + V    G+L LRL++V        P    D + ++  +          R+ AR  R F  YA  WWK +  T++    R VKIF E+E G+H   C+ + P R GR+L +PRHAARFVSLLP+    +VG         WH+ H+ L    GD  DHALLLCS LLGFGLDA VC GL+   DD+N         PGG              E  H+WV + SG +++++ +FWESLTGQ              R+T  G+    P   + +V C+FNHR F+ANKQ
Sbjct:  271 LCKNGGASVVVELRGIGPTAKVRIPVGMLDLRLDLV--------PSVVGDTSVLLSERDVDMTLETESRAIARSHRRFCEYARVWWKEYIETNQSFRGRCVKIFVENEWGEHVPACTMVRPLRAGRLLDSPRHAARFVSLLPYIHEESVGG---GRLEIWHTVHSILCRRQGDVEDHALLLCSFLLGFGLDAYVCIGLID--DDEN---------PGG--------------EKEHVWVVSLSG-KANRQVLFWESLTGQTL-----------DRQTLVGRDGAKPNCPYRRVDCVFNHRTFYANKQ 529          
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A2R5GMW5_9STRA (Centrosomal protein of 76 kDa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMW5_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.050e-45
Identity = 112/301 (37.21%), Postives = 146/301 (48.50%), Query Frame = 1
Query:   49 SGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
            SG   +AVEL +    + V    GIL LRLE+V        P    D   +   +A+ +        +A R F  YA AWW+ F         R VKIFAE+E G H  V +F+ P R GR+L + RHAARFVSL+P+     VG    +    WH  H FL+ G GD  DHA+LLC+LLLGFGL+A VC G V  + +          EP                E  H+W  T SG + ++   FWESLTG R  M APR      R           + + +++C FNH  F+ANKQ
Sbjct:  234 SGAATVAVELHATGEAAKVRVPAGILDLRLELVP---ARPGPSPLTDEKLLTSLRANTK-----QAGQAYRQFCEYARAWWEEFVELDDRFRHRLVKIFAENEWGDHEPVFAFVRPMRAGRLLASARHAARFVSLIPYTREEMVGG---SRLEVWHVAHTFLSKGRGDCEDHAVLLCNLLLGFGLNAFVCMGTVQDSPE----------EP----------------ERDHVWCMTLSG-KDNRTCTFWESLTGHRVVM-APR------RDVESAAQTALRQSYRRIACAFNHESFYANKQ 489          
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A7R9UA61_9STRA (Centrosomal protein of 76 kDa (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA61_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.280e-45
Identity = 110/302 (36.42%), Postives = 152/302 (50.33%), Query Frame = 1
Query:   61 LLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSA---FPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSD--KKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
            + AVEL +A PDS++   GGILHLR+E+ A  +       PF + ++   +D  A      A+ R+ A   F LYA  WW  +++   ++ +R   +FA DE G HR VCSF+ P R  R+L +P+ AARFVSL+PF     VG +       WH+  AFL+ G GD  DHA+LLCSLLLGFGLDA V  G +        + + +                   +   H WV TF+ +      K  FWESLTGQR+ + +         R+ P         +  V C+FN   FF NKQ
Sbjct:  189 VFAVELIAAGPDSVLQGTGGILHLRMELQAGGDSETQIELPFTSKEIEESVDKTAKD----AANRTRA---FVLYARRWWAEYTNIDPLIDQRRTCLFAADEAGGHRSVCSFVSPVRAERLLHSPQDAARFVSLIPFERSYGVGVR--KRHETWHNACAFLSRGAGDVEDHAVLLCSLLLGFGLDAYVVLGTIRGDRVLTAENETAKQIDD--------------QARDHAWVVTFARTADSVGMKVSFWESLTGQRYELGSKH-------RSHP---------YVSVGCVFNDAAFFGNKQ 451          
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A6P4Z5V2_BRABE (Centrosomal protein of 76 kDa n=6 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Z5V2_BRABE)

HSP 1 Score: 172 bits (437), Expect = 2.650e-45
Identity = 117/303 (38.61%), Postives = 153/303 (50.50%), Query Frame = 1
Query:   46 KSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRH-FSKVSCMFNHREFFANKQ 951
            + G +  AVEL     +S V PVG +L +RLE++  P  +  P   D +T  ++ + S+R       +E  R F +YA  WW+ F       S R VKIFA+DE   +R VCSF+ P + GR+L TPR AARF+SLL +   STVG  P A Q  W + HAFL    GD  DH++LLCSLLLGFGLDA VC G    T  +N                           T H WV T      D +A FWESLTG R++     P         P      P++ +  V C+FNH+ F+AN Q
Sbjct:  230 QDGYINTAVELMGVGTESKV-PVG-VLDVRLEILPHPVQTLAP---DVITTQLNLEQSRR-------AERERLFLVYAKQWWREFLQIRGTNSSRLVKIFAQDENATNRPVCSFVRPLQAGRLLDTPRQAARFISLLTYEKASTVGGGPRAEQ--WCTMHAFLCRNKGDCEDHSVLLCSLLLGFGLDAYVCVG----TKTNN---------------------------TAHTWVLTLG---MDGEATFWESLTGHRYSHQPINPD------DPPTVEQPRPQYPYRSVGCVFNHQVFYANSQ 478          
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: UPI0001CBA812 (centrosomal protein of 76 kDa n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA812)

HSP 1 Score: 162 bits (410), Expect = 1.580e-41
Identity = 109/302 (36.09%), Postives = 148/302 (49.01%), Query Frame = 1
Query:   49 SGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRH-FSKVSCMFNHREFFANKQ 951
            SG + + VEL     ++ V P+G +L LRLE++  P       K D +T  +  + ++        +E  R F +YA  WW+ +       + R VKIFA+DE G +R VCS++ P R GR+L TPR AARF+S + +   STVG    A    W S HAFL    GD  DHA+LLCSLL+GFGL+A VC G                                + + T H WV T S   +D    FWESLTGQR+   A  P         P      P++ +  V C+FNH+ F+AN Q
Sbjct:  228 SGRMNIPVELLGVGTEAKV-PIG-VLELRLELIPIPTQM---LKEDIITAQVALERNRT-------AERERLFLVYAKQWWREYLQIRPSHNNRLVKIFAQDESGTNRPVCSYVRPLRAGRLLDTPRQAARFISAIGYERTSTVGSGG-AKAEIWTSMHAFLCKNKGDCEDHAVLLCSLLIGFGLNAYVCVG-------------------------------TKTKGTAHAWVMTIS---TDGLVTFWESLTGQRYIHQAINPN------DPPAIAQPQPQYPYRTVGCVFNHQVFYANSQ 476          
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A7S3ZYI7_9STRA (Centrosomal protein of 76 kDa n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYI7_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.830e-41
Identity = 113/301 (37.54%), Postives = 147/301 (48.84%), Query Frame = 1
Query:   70 VELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSS-TSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTF------SGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHFSKVSCMFNHREFFANKQ 951
            + L +A PD +   V   L + L+VVA       PF+ DDV   M         A S  +EA R FYLYA  WW GF+    + L +R VK+FA DE G+ RCVCS++ P R  R+L  P  AARFVSLLP     +V          WH+P A  A G+GD  DHA LLCSLL G+GLDA VC G +      +G+G   GA+P                   H+WV TF      +  R+  +   WES TG+R ++ AP    +R R             +  V+C+F    F ANKQ
Sbjct:  209 IALKAAGPDGVDGEVA-TLDVALDVVAVGGALDLPFQPDDVEDAMRK-------ARSEHAEAARAFYLYAKQWWDGFAKGAGRDLQQREVKLFARDEAGEMRCVCSYVHPLRANRVLDGPHQAARFVSLLPLEKAGSVAG---GNADTWHTPLATCARGSGDVWDHATLLCSLLRGYGLDARVCVGSMS-----DGRG---GAQP-------------------HVWVATFLRTSVDASGRARLRVTAWESATGRRCSL-APLDAQARER-------------YLSVACVFGDDSFHANKQ 457          
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A835ZHM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM4_9STRA)

HSP 1 Score: 152 bits (384), Expect = 8.160e-39
Identity = 115/331 (34.74%), Postives = 149/331 (45.02%), Query Frame = 1
Query:    1 RRALVPASGAQEDLHKSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWK-----GFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLE-----PYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRA--WHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASG-AEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRH-FSKVSCMFNHREFFANKQ 951
            RR LV A              L VE+ +AA         G L  RL++VA P  +  P  A  V  +M          A+ RS AR DFYLY   WW      G + ++   +  +V++FA DERG+ RCVCSFL          GR++ +PRHAAR V+L+P+  R  VG           W S H FLA   G A++HALLL +LL GFGLDA VC G +   D         G A+P             R     H WV T+ G  + ++  FWE LTG R A                      P H F  +SC+FN +  +ANKQ
Sbjct:    6 RRELVGACALDWRAALVSDAALEVEV-TAAXXXXXXXXAGALRCRLDLVASPADAMVPLAAPTVELLMSNAH------AAARSRAR-DFYLYCQRWWDELAQAGPAQSAHAANDSNVRLFAVDERGRRRCVCSFLPRAAATAAATGRLVHSPRHAARIVNLIPYAARRGVGXXXXXXXXXAQWLSAHTFLAQRRGGAAEHALLLAALLCGFGLDAYVCLGEIRDDDXXXXXXXXXGDAQP-------------RRSSRAHAWVATYFGPHAAQRVTFWEPLTGARVA---------------------APAHPFVTLSCVFNAQSLYANKQ 294          
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Match: A0A2G8L1X5_STIJA (Putative centrosomal protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L1X5_STIJA)

HSP 1 Score: 154 bits (388), Expect = 1.170e-38
Identity = 107/295 (36.27%), Postives = 143/295 (48.47%), Query Frame = 1
Query:   70 VELASAAPDSIVHPVGGILHLRLEVVAPPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGFSSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVSLLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFGLDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWVCTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRH-FSKVSCMFNHREFFANKQ 951
            VEL     ++ V PVG I+ ++LEV+  P+       +++V       A++     S  SE  R F +YA  WWK +    +    R VKIFA+DE   +R VC +++P R GR+L TPR AARF+S++ F   STVG   P  Q  W+S HAFL    GD  DHA+LLC+L LGFGL+A VC G                       V+G            H WV T S    D    FWESL+G R+      P         P      P++ F  + C+FNHR F+AN Q
Sbjct:  223 VELMGIGEENKV-PVG-IIEVKLEVLPIPQ----QILSNEVI------ATQVNLERSRVSERERLFLVYAKQWWKEYLQIRETHQNRLVKIFAQDENAANRFVCLYVKPLRAGRLLDTPRQAARFISVIGFERSSTVGGGQPKEQ--WNSSHAFLCKNRGDCEDHAILLCNLFLGFGLNAFVCVGTK---------------------VKG----------AAHTWVVTIS---PDGLVTFWESLSGHRYIHQPVNPD------DPPSVQLPRPQYPFRTIGCIFNHRTFYANCQ 463          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11926.1640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN44_ECTSI1.590e-21495.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1TR63_9STRA4.210e-5641.00Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2S781_9STRA1.820e-4938.44Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2R5GMW5_9STRA1.050e-4537.21Centrosomal protein of 76 kDa n=1 Tax=Hondaea ferm... [more]
A0A7R9UA61_9STRA1.280e-4536.42Centrosomal protein of 76 kDa (Fragment) n=2 Tax=P... [more]
A0A6P4Z5V2_BRABE2.650e-4538.61Centrosomal protein of 76 kDa n=6 Tax=Branchiostom... [more]
UPI0001CBA8121.580e-4136.09centrosomal protein of 76 kDa n=1 Tax=Saccoglossus... [more]
A0A7S3ZYI7_9STRA1.830e-4137.54Centrosomal protein of 76 kDa n=1 Tax=Pelagomonas ... [more]
A0A835ZHM4_9STRA8.160e-3934.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2G8L1X5_STIJA1.170e-3836.27Putative centrosomal protein n=1 Tax=Stichopus jap... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11926contigEcto-sp13_S_contig11926:780..4992 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score605.5
Seed ortholog evalue1.4e-170
Seed eggNOG ortholog2880.D8LN44
Preferred nameCEP76
Model size951
KEGG koko:K16457
Hectar predicted targeting categoryother localisation
GOsGO:0000086,GO:0000278,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0006996,GO:0007049,GO:0007346,GO:0008150,GO:0009987,GO:0010389,GO:0010564,GO:0010824,GO:0015630,GO:0016043,GO:0022402,GO:0022406,GO:0022607,GO:0030030,GO:0030031,GO:0032886,GO:0032991,GO:0033043,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0046599,GO:0046605,GO:0050789,GO:0050794,GO:0051128,GO:0051179,GO:0051493,GO:0051640,GO:0051641,GO:0051726,GO:0060271,GO:0065007,GO:0070507,GO:0070925,GO:0071840,GO:0097711,GO:0120031,GO:0120036,GO:0140056,GO:1901987,GO:1901990,GO:1902115,GO:1902749,GO:1903047
Exons7
EggNOG free text desc.regulation of centriole replication
EggNOG OGs28I44@1,2QQEI@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_003420.1
Cds size951
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11926.1640.1prot_Ecto-sp13_S_contig11926.1640.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11926 780..4992 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462630.9978387-CDS-Ecto-sp13_S_contig11926:779..8911681462630.9978387-CDS-Ecto-sp13_S_contig11926:779..891Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11926 780..891 +
1681462631.0078897-CDS-Ecto-sp13_S_contig11926:1698..18201681462631.0078897-CDS-Ecto-sp13_S_contig11926:1698..1820Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11926 1699..1820 +
1681462631.0185702-CDS-Ecto-sp13_S_contig11926:2170..22651681462631.0185702-CDS-Ecto-sp13_S_contig11926:2170..2265Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11926 2171..2265 +
1681462631.0266497-CDS-Ecto-sp13_S_contig11926:3098..32091681462631.0266497-CDS-Ecto-sp13_S_contig11926:3098..3209Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11926 3099..3209 +
1681462631.0347025-CDS-Ecto-sp13_S_contig11926:3771..40751681462631.0347025-CDS-Ecto-sp13_S_contig11926:3771..4075Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11926 3772..4075 +
1681462631.0426364-CDS-Ecto-sp13_S_contig11926:4346..44551681462631.0426364-CDS-Ecto-sp13_S_contig11926:4346..4455Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11926 4347..4455 +
1681462631.0506213-CDS-Ecto-sp13_S_contig11926:4894..49921681462631.0506213-CDS-Ecto-sp13_S_contig11926:4894..4992Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11926 4895..4992 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11926.1640.1

>prot_Ecto-sp13_S_contig11926.1640.1 ID=prot_Ecto-sp13_S_contig11926.1640.1|Name=mRNA_Ecto-sp13_S_contig11926.1640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp
RRALVPASGAQEDLHKSGGVLLAVELASAAPDSIVHPVGGILHLRLEVVA
PPEVSAFPFKADDVTRIMDFQASKRLFAASVRSEARRDFYLYANAWWKGF
SSTSKVLSKRSVKIFAEDERGQHRCVCSFLEPYRQGRMLPTPRHAARFVS
LLPFRPRSTVGEQPPATQRAWHSPHAFLAAGTGDASDHALLLCSLLLGFG
LDALVCCGLVHPTDDDNGQGDASGAEPGGVGVRGGGSDGNRGEETGHMWV
CTFSGSRSDKKAVFWESLTGQRFAMSAPRPRPSRGRRTTPGKMAVTPRHF
SKVSCMFNHREFFANKQ
back to top

mRNA from alignment at Ecto-sp13_S_contig11926:780..4992+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11926.1640.1 ID=mRNA_Ecto-sp13_S_contig11926.1640.1|Name=mRNA_Ecto-sp13_S_contig11926.1640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11926:780..4992+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGACGGGCGTTGGTGCCAGCCAGCGGGGCCCAAGAAGATTTGCACAAGAG CGGCGGCGTTCTCCTCGCGGTGGAGCTTGCCTCGGCCGCGCCGGACTCCA TCGTACACCCAGGTGACGCGATGGAAGCTCACAACTGGCGATCAAATATG CGGTGTTTGACAGCCCAGTTTCCCCTCTCCTCTCTGTGAATCTCGGGGGA ATTCCGCAACCGCCCTATACGGCTTTATCACTTTGAGATGTTCTGGAACT GTTTTTGCAGCGTAGAGACGTCCCGATCTCGCGTGCTGCACCAGTAGGAG CACCATAGGAAACACGGTGGTCGAGCACTTTCAGTTGGCGTCGGGGAACT GATCAAGAAAAATTAAAATCAGCGGCCGGTGTGGCCAAGTTGCCTTGTCG GCGTGTCTCCGACGACCCAAGATGCCAACGAAGAACAGTAGGGGGTCATC AGTGTAGTGCGGCAGCTTCCCCTGCTCGGCCACATCCTTTCTACGGCTAG TTTGCTGGCGATGCCTTTACTCTGTTTCTTAATCGTCTCGGTCCACGACC TGCAACAGGCACATGCATTCCATCATCTTCATTCGCTTACTCGTTTAATA TGTCACCCGTTTTCTCTCTTGCTTACTCTTTCTCCCGTACCCTTCCGGGT GCCTTATAGGCCTGGTCGGCATTAGGATCCGACGTGTACCTTACTGGCAG TTGAAGCGTCCCGAGGGTCCCCGGGACGTACATCGTGTATTGTAACGGGG GTGCATCGAACTTCGTCCGTAACACCGACTGTTTATCAACCCAACGTATC ACTGACCGTTCATCATCACCAACAATAATCGTAGTAACACCAACATCAAC ACCCAAACAAGAACAACAACGCAATGACGACGCCGCTCCTCCCAAAAAAA ATTGACCCCGTTGTCCCAGTCGGAGGTATTCTTCACCTTCGACTCGAGGT GGTCGCCCCTCCAGAAGTGTCGGCTTTCCCCTTCAAGGCCGACGATGTCA CGAGGATCATGGACTTTCAGGCAAGCAAGCGGTTATTCGCCGTTCTACTT CACGTGCTGCGGCAGTGTCGGCTCTCAGTTATTTGTGCCCTTCACACACC GGTTCCGCGGCGACCCCCGTCCTGGGGGCGTTTCTCCGTGTTCCGTTCCA CAGCCCCAAACCTCGTTCCTTTGGGGTCAAGGTGTGGTTTGACTGTTAGG CTTTCTGTCAGAGGGTTGGATGCCGACACGGCGCTCAAAATTCGACCACA AGTCTTGAGTTGTCGAGTGATGCGCGCCGTGTGGTGGCCAAGAAACGTGT CGCTGTGAGCGTGCCCGAAGTCTCGAACTCGCTTCCTCATCTGTGAGCGC ATGTGATTGCTCTTCTATTTTTCATTTGTTATCGTTCGCAGGCTTCGGTC CGCAGCGAGGCGCGGCGGGACTTTTACCTGTATGCGAACGCATGGTGGAA GGGTTTCAGCTCAACGTCGAAGGTTCTAAGCAAGAGGTGCTTTTACGAAC GGGGTCACCGTGGTTCCTCAAAGGGAACGAAATTCCCCAAACACGAAGCA CCCCCTGTAGATTCAATGCAATCGAATACTGTTGTTGTTGTTGTTGTTGC TGTTGTCGTCGTGGTTGTTGTTGTTGTCGATGAGTGGAGGCGATGGAAGT GCTTCGGACTGAAGTTGTCTGGAGTGCAAACGTGTGAGGCGCGGGCCAAG CGGATACGCGATTGAAATGGAGTGTTGTTGACCTCCAGCTAGTTTGATCT GTGTACTGTATCTGGCTGTTGTGGAGGACTTGTCTGTCCAGAACCCCTCT GGCAGTAGTCACAATATGCAGATTCTACGATGACACACATGTCGCACATG CTTCGTTTCAGTCCCTGCTACCTCAATTTAGATCCGCCAAGTCCGTTGCA GAGGGGAAACGACCGCAAGTACAACACAGATCTAAATATTTAGTGCTGCT GAATCACTCTTTTGACCTCAAGAGCAAGTTTGTATCATCTTCATTGTCCC AACGTGTTTTGAGGGAGGCCAAGCAAATCATCAAAAATCAAGTTGTATGA GGCAGTTCGGCGTCTCTCTTCCCCTCTGCGGTGTTTTTTTTTCGTATATC AGTCGTCGTCGCTATGGAGACCAAGTGGGTGACAACCACCAATACGATTG TAAGGAGTCGATCCAACAGCATTCCGCGATCCAACAGCCATCCGTGATAA TAAAAACGAATCGTAACGTGAGATTAAAGCGTGTGGCAATAGACAATAGT AAGCAGTTGTTGACCTCTTTTGCCTGGATCTATTTTTCGGCCGATGTTGT TGTTCGCTTTTTTTTCCAGATCCGTCAAGATCTTTGCAGAGGACGAGCGA GGGCAGCACCGCTGCGTGTGCTCGTTTCTCGAACCCTATCGTCAGGGCCG GATGCTGCCCACACCGAGGCACGCTGCAAGGTGATTTCCTGCCCTGTTGG CAATGATATCCAAGCTGTTTTCGTACCACATACATCGGACTTTGTTCGGC GCGTGTTTGCCGTGATTTTTGTTTGGCGTGGGATAGTGGTGAGGACGTGA TCTTTTTCTTGTCGATGCTCAGCCCTTCCATGACTTCAGTTTCCTTTGCA GCGCCGAAACACGCAAGGACGCATCCTCATCGATGTGTCGTGTGTCTACC TCCGTAGCTTTGCGTACACGTGCGAGTAAAGGTTTGAGCATTTGTCATGC GAGAGCCAGTTCTTAAGAAAGAAGCATCCTAACATAGTCAGACCGGCTCA AGTCACGTAAGGGTTAAGTCTTCCTTGATCCAACTTAGGCCGTGGCGCCC ACGCCCGGGCGCGCGACCGCATGGTTTCACCCTACGGGCGTTTCTGTATT TCTTGTTTCCAAAACGTCAAATCATCGTGAGTCCCCGTTTCCTTGGTGGA GAACGCGCGAAGTACCCACCTGCTTCCTGGCTACCACGCAAACGCGACAC CGCCACCGCTTGTCGCAAAACCTCGCGCGGATAACACAACAGGTTCGTCT CCCTCCTCCCCTTCCGGCCCCGCTCCACCGTGGGAGAGCAGCCGCCCGCC ACGCAGAGGGCGTGGCACTCCCCCCACGCTTTCCTGGCTGCGGGAACCGG GGACGCCTCGGACCACGCGCTGCTGCTGTGCTCCCTCCTGCTCGGGTTCG GCCTGGACGCGCTCGTGTGCTGCGGCCTGGTGCACCCCACCGACGACGAC AACGGCCAAGGCGACGCCTCCGGAGCTGAGCCGGGGGGCGTCGGGGTACG GGGAGGGGGCTCCGACGGAAACCGGGGGGAGGAGACGGGGCACATGGTAA GAAACGGGAATTAATAAAGGGGTTCAGGGCCATCAGCGATTAGTTGAAAG CATCGCAGTCACGCGTCCTCGGGGTTTCGGCGGGTTTTTCTCGAGGTGTA CGAAGGTGAAAGTCCGGCCGTCAGCAAGGTACCATGCCGCGGACTTACAT GCCCGCGGCAGGCTTGAACACAACGACAACGCACGTCCCGCCCTCTCCCT CCGCCCGGGCGCTCCGAACGACTCGTCTTTTCCCGATCGATACTGCCGAT GGCGTGCGCAACAATAGTGGGTGTGCACCTTCAGCGGCAGTCGATCGGAC AAGAAAGCGGTTTTCTGGGAGTCTCTGACCGGACAACGTTTCGCCATGAG CGCTCCACGGCCGAGGCCTTCTAGAGGTAAGAGTTTTTTCTGGACCTCTA GCAGCTACCCAAATAGAGCCACAAGAACAAGAAGGCGATAGACCTGCGCG AATGTTTCGTGCGTACGTCATAACCCCCTCCCTGTTGTTTTTTATGTTGC GGTGCCTCGTTTCGGGAATCGTATCGGGTGCCTTTTCTTGCTCCGTCTCC GCCGCGACATTATATTTTGAGCATTATTGAGCACTTTCGAAAATTTCGTC TGGGGCCTGCTACTGCATCAGTGCGTCAATCCATCCCGTCTCTTTCCTCC TCCCTCTCCACTCCCTTTGACGCTACGTCGTTTATGTAGTGACGTACCAG GCCAGAGGCTCCCCAACGGAACTGTGTCAAACTCGCTGCCTTTCGTTCTT CCTCTAGCTGGTCGATGTATGTCTTCGGTCCTTTCCGTTGTGGTGTGTGT TGCCCTCGTGCGTAGGGCGCAGAACAACACCGGGAAAGATGGCCGTGACC CCGCGGCACTTCAGCAAGGTCTCGTGCATGTTCAACCACCGGGAGTTCTT CGCCAACAAGCAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11926:780..4992+

>mRNA_Ecto-sp13_S_contig11926.1640.1 ID=mRNA_Ecto-sp13_S_contig11926.1640.1|Name=mRNA_Ecto-sp13_S_contig11926.1640.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=951bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11926:780..4992+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGACGGGCGTTGGTGCCAGCCAGCGGGGCCCAAGAAGATTTGCACAAGAG
CGGCGGCGTTCTCCTCGCGGTGGAGCTTGCCTCGGCCGCGCCGGACTCCA
TCGTACACCCAGTCGGAGGTATTCTTCACCTTCGACTCGAGGTGGTCGCC
CCTCCAGAAGTGTCGGCTTTCCCCTTCAAGGCCGACGATGTCACGAGGAT
CATGGACTTTCAGGCAAGCAAGCGGTTATTCGCCGCTTCGGTCCGCAGCG
AGGCGCGGCGGGACTTTTACCTGTATGCGAACGCATGGTGGAAGGGTTTC
AGCTCAACGTCGAAGGTTCTAAGCAAGAGATCCGTCAAGATCTTTGCAGA
GGACGAGCGAGGGCAGCACCGCTGCGTGTGCTCGTTTCTCGAACCCTATC
GTCAGGGCCGGATGCTGCCCACACCGAGGCACGCTGCAAGGTTCGTCTCC
CTCCTCCCCTTCCGGCCCCGCTCCACCGTGGGAGAGCAGCCGCCCGCCAC
GCAGAGGGCGTGGCACTCCCCCCACGCTTTCCTGGCTGCGGGAACCGGGG
ACGCCTCGGACCACGCGCTGCTGCTGTGCTCCCTCCTGCTCGGGTTCGGC
CTGGACGCGCTCGTGTGCTGCGGCCTGGTGCACCCCACCGACGACGACAA
CGGCCAAGGCGACGCCTCCGGAGCTGAGCCGGGGGGCGTCGGGGTACGGG
GAGGGGGCTCCGACGGAAACCGGGGGGAGGAGACGGGGCACATGTGGGTG
TGCACCTTCAGCGGCAGTCGATCGGACAAGAAAGCGGTTTTCTGGGAGTC
TCTGACCGGACAACGTTTCGCCATGAGCGCTCCACGGCCGAGGCCTTCTA
GAGGGCGCAGAACAACACCGGGAAAGATGGCCGTGACCCCGCGGCACTTC
AGCAAGGTCTCGTGCATGTTCAACCACCGGGAGTTCTTCGCCAACAAGCA
G
back to top