mRNA_Ecto-sp13_S_contig11916.1635.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: D7G4W6_ECTSI (Acireductone dioxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4W6_ECTSI) HSP 1 Score: 270 bits (691), Expect = 9.080e-91 Identity = 132/151 (87.42%), Postives = 139/151 (92.05%), Query Frame = 1
Query: 1 VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFWEASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANFATAAATSK 453
+GVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMH+DEEIRY+LEGS VR KDE + + S GDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHP+RKDYLANFATAAAT+K
Sbjct: 36 LGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHSDEEIRYILEGSGYFD-VRAKDERWVRIKMSKGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPVRKDYLANFATAAATTK 185
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: A9NPM8_PICSI (Acireductone dioxygenase n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NPM8_PICSI) HSP 1 Score: 205 bits (522), Expect = 4.690e-65 Identity = 98/150 (65.33%), Postives = 117/150 (78.00%), Query Frame = 1
Query: 1 VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFWEASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANFATAAATS 450
+GVL+W LDADK+ DP L++IR++RGY+Y D+IT SPDKL NYEDK+KSFFEEH+HTDEEIR+ LEGS D+ W GDMI LPAGIYHRFTLD +NYIKAMRLFVGEPVWTP NRPQDD+PIRK+Y+ NF ++S
Sbjct: 33 LGVLYWHLDADKYETDPDLQQIRENRGYTYTDMITCSPDKLPNYEDKLKSFFEEHIHTDEEIRFCLEGSGYFDVRDGDDKWIRVW-LKKGDMIVLPAGIYHRFTLDTSNYIKAMRLFVGEPVWTPYNRPQDDNPIRKEYIDNFFKEGSSS 181
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: A0A5J4XYY7_9CHLO (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XYY7_9CHLO) HSP 1 Score: 203 bits (516), Expect = 1.820e-64 Identity = 96/146 (65.75%), Postives = 112/146 (76.71%), Query Frame = 1
Query: 1 VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFWEASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANFATA 438
+GVL W+LDAD H +DP L+ IR DR YSYQD+IT+ PD L NYE+K+KSFFEEH+HTDEEIRY+LEGS VR K + + + GDMI LP GIYHRFTLD+ NY+KAMRLFVGEPVWTP NRPQDD P RK Y+ F TA
Sbjct: 15 LGVLSWQLDADNHENDPTLKAIRTDRNYSYQDVITIRPDTLPNYEEKLKSFFEEHLHTDEEIRYILEGSGYFD-VRDKQDRWIRIALNKGDMIVLPEGIYHRFTLDEVNYVKAMRLFVGEPVWTPFNRPQDDKPSRKKYVQTFLTA 159
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: MTND1_PHYPA (Acireductone dioxygenase 1 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=MTND1_PHYPA) HSP 1 Score: 202 bits (513), Expect = 1.460e-63 Identity = 93/143 (65.03%), Postives = 111/143 (77.62%), Query Frame = 1
Query: 1 VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFWEASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANF 429
+GVLHW LDAD DP L++IR++RGY+Y+D I VSP++LANYE KIK+F+EEHMHTDEEIRY L+GS +D W GDMI LPAG YHRFTLD+ NY+KAMRLFVGEPVWTP NRPQD+HP+RKDY+ NF
Sbjct: 33 LGVLHWVLDADSFETDPELQRIRKERGYNYEDFIEVSPERLANYETKIKNFYEEHMHTDEEIRYCLDGSGYFDIRDPEDRWIRIW-VKKGDMIVLPAGSYHRFTLDENNYLKAMRLFVGEPVWTPYNRPQDEHPVRKDYINNF 174
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: A0A2R6WWN5_MARPO (Acireductone dioxygenase n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WWN5_MARPO) HSP 1 Score: 201 bits (512), Expect = 2.360e-63 Identity = 95/148 (64.19%), Postives = 111/148 (75.00%), Query Frame = 1
Query: 1 VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFWEASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANFATAAA 444
+GVL W LDADK +DP LEKIR++R Y+YQDII VSP L YE KIKSF+EEH+HTDEEIRY ++GS D W G DMI LPAG+YHRFTLD++NYIKAMRLF+GEPVWTP NRPQDDHPIR+DY+ NF + A
Sbjct: 46 LGVLQWHLDADKFENDPELEKIRKERNYTYQDIINVSPTSLPEYERKIKSFYEEHIHTDEEIRYCIDGSGYFDVRDSADRWIRIWTKKG-DMIVLPAGLYHRFTLDESNYIKAMRLFIGEPVWTPYNRPQDDHPIRRDYINNFLKSHA 192
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: D8R5H6_SELML (Acireductone dioxygenase n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5H6_SELML) HSP 1 Score: 201 bits (510), Expect = 2.420e-63 Identity = 95/144 (65.97%), Postives = 111/144 (77.08%), Query Frame = 1
Query: 1 VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFWEASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANFA 432
+GVLHW LDAD++ D L++IR+ RGYSYQDIITVSP+KL NYE KI+SFFEEH+H DEEIRY L+GS D W GDMI LPAG YHRFTLD++NYIKAMRLFVGEPVWTP NRPQD+HP+RK Y++ FA
Sbjct: 33 LGVLHWNLDADRYETDSKLQEIRKKRGYSYQDIITVSPEKLPNYEQKIRSFFEEHIHLDEEIRYCLDGSGYFDVRDLGDRWIRIW-VKKGDMIVLPAGSYHRFTLDNSNYIKAMRLFVGEPVWTPYNRPQDEHPVRKQYISLFA 175
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: A0A0U9HMK5_KLENI (Acireductone dioxygenase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HMK5_KLENI) HSP 1 Score: 202 bits (513), Expect = 3.050e-63 Identity = 98/147 (66.67%), Postives = 115/147 (78.23%), Query Frame = 1
Query: 1 VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFWEASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANFATAA 441
+GV+HW LDADK+ DP L++IR+DR YSYQD+ITVSPDKL NYE KIKSFFEEH+HTDEEIRY L+GS VR ++ + GDMI LPAG+YHRFTLD+ NYIKA+RLFVGEPVWTP+NRP DDHPIRK Y+ F A
Sbjct: 66 LGVVHWVLDADKYETDPELQQIRKDRNYSYQDLITVSPDKLPNYEVKIKSFFEEHIHTDEEIRYCLDGSGYFD-VRDANDKWIRILVRKGDMIVLPAGMYHRFTLDENNYIKALRLFVGEPVWTPINRPVDDHPIRKSYVDAFVHKA 211
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: D8SIG5_SELML (Acireductone dioxygenase n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SIG5_SELML) HSP 1 Score: 192 bits (489), Expect = 5.030e-60 Identity = 88/143 (61.54%), Postives = 108/143 (75.52%), Query Frame = 1
Query: 1 VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFWEASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANF 429
+GVLHW ++AD++ DP L+K+R++RGY Y+D ITVSPDKL NYE KIK+F+EEH+HTDEEIRY L+GS D W GDMI LPAG YHRFT D++NYIKAMRLFVG P+WTP NRPQDDHPIR+ Y++
Sbjct: 33 LGVLHWVMNADEYETDPQLKKLREERGYDYEDFITVSPDKLPNYEHKIKTFYEEHIHTDEEIRYCLDGSGYFDVRDSDDRWIRIW-VEKGDMIVLPAGSYHRFTNDESNYIKAMRLFVGAPIWTPYNRPQDDHPIRQQYVSEI 174
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: A0A131Z470_RHIAP (Acireductone dioxygenase n=7 Tax=Rhipicephalinae TaxID=426437 RepID=A0A131Z470_RHIAP) HSP 1 Score: 191 bits (486), Expect = 1.390e-59 Identity = 91/148 (61.49%), Postives = 110/148 (74.32%), Query Frame = 1
Query: 4 GVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFW---EASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANFATA 438
GVL+W+L+AD + DD LEKIR++RGYSY D+I +S DKL NYE+KIK+FF+EH+H+DEEIR+VL GS C D+ W E + GD++ LPAGIYHRFTLD NYIKAMRLFVGEPVWTP+NRP DDHP R YL A
Sbjct: 37 GVLYWKLNADTYEDDGELEKIRKERGYSYTDVIEISKDKLPNYEEKIKTFFQEHLHSDEEIRFVLAGSGYFDVRDCHDK----WIRIEVAKGDLLVLPAGIYHRFTLDKQNYIKAMRLFVGEPVWTPINRPADDHPARNQYLETLRQA 180
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Match: A0A2P2K454_RHIMU (Acireductone dioxygenase n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2K454_RHIMU) HSP 1 Score: 192 bits (487), Expect = 1.580e-59 Identity = 91/143 (63.64%), Postives = 104/143 (72.73%), Query Frame = 1
Query: 1 VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHTDEEIRYVLEGSASVGTVRCKDEVPLFWEASGGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPIRKDYLANF 429
+GVL W LDADK+ D L+K+R++RGYSY D I P+KL NYE+KIK+FFEEH+HTDEEIRY L+GS C D+ W GG MI LPAGIYHRFTLD NYIKAMRLFVG+PVWTP NRP D P RKDYL F
Sbjct: 45 IGVLSWRLDADKYETDEDLKKLREERGYSYMDFIECCPEKLPNYEEKIKNFFEEHLHTDEEIRYCLDGSGYFDVRSCNDQWIRVWVKKGG-MIVLPAGIYHRFTLDTDNYIKAMRLFVGDPVWTPFNRPHDHLPARKDYLQAF 186 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11916.1635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11916.1635.1 >prot_Ecto-sp13_S_contig11916.1635.1 ID=prot_Ecto-sp13_S_contig11916.1635.1|Name=mRNA_Ecto-sp13_S_contig11916.1635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp VGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSback to top mRNA from alignment at Ecto-sp13_S_contig11916:29..2283+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11916.1635.1 ID=mRNA_Ecto-sp13_S_contig11916.1635.1|Name=mRNA_Ecto-sp13_S_contig11916.1635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2255bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11916:29..2283+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11916:29..2283+ >mRNA_Ecto-sp13_S_contig11916.1635.1 ID=mRNA_Ecto-sp13_S_contig11916.1635.1|Name=mRNA_Ecto-sp13_S_contig11916.1635.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=459bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11916:29..2283+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |