mRNA_Ecto-sp13_S_contig11904.1625.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: D8LB73_ECTSI (Peroxinectin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB73_ECTSI) HSP 1 Score: 204 bits (519), Expect = 5.390e-58 Identity = 106/140 (75.71%), Postives = 116/140 (82.86%), Query Frame = 1
Query: 19 IRQSYMLGWNQSDLVDEGGDMFITLSARGIEGQGTIAIGFGGRSMETADDFVICVVESKTSAECTDHSGPGARFNPLPDDEENNELDVVSMGVDGEWTSATFARSDEGTDDSVREGRAKSKEGLLHPLSDVIYLSQNTSI 438
+ + Y L WNQSDLV+EGGDMFITLSARGIEGQG IAIGFGG SMETADDFVICVVES+TSAECTD S P R P DDEEN +LDVV++ VDGEWTS TFARS EGTDDSVR+GR K+KE L LSD IYLSQ+TSI
Sbjct: 561 LAEGYKLAWNQSDLVEEGGDMFITLSARGIEGQGMIAIGFGGLSMETADDFVICVVESETSAECTDRSAPRERSEPPLDDEENTDLDVVTVSVDGEWTSVTFARSGEGTDDSVRDGRGKAKEDYL--LSDDIYLSQDTSI 698
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: D8LRN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN2_ECTSI) HSP 1 Score: 187 bits (475), Expect = 9.150e-57 Identity = 100/146 (68.49%), Postives = 107/146 (73.29%), Query Frame = 1
Query: 1 ISALEPIRQSYMLGWNQSDLVDEGGDMFITLSARGIEGQGTIAIGFGGRSMETADDFVICVVESKTSAECTDHSGPGARFNPLPDDEENNELDVVSMGVDGEWTSATFARSDEGTDDSVREGRAKSKEGLLHPLSDVIYLSQNTSI 438
+S +EPI QSYML WNQSDLVDEGGDMFITLSARGIE QG I IGFGG SMET DDFVI VVES+TSAECTDHSGPG R P NNEL+VV M VDG+WT TFA S EGTDDS +PLSD IY SQ+TSI
Sbjct: 1 MSTVEPIHQSYMLAWNQSDLVDEGGDMFITLSARGIEAQGMITIGFGGLSMETTDDFVIYVVESETSAECTDHSGPGGRSKPXXXXXXNNELEVVRMSVDGQWTGVTFALSGEGTDDSD------------YPLSDDIYPSQDTSI 134
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: A0A6H5JBL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.160e-17 Identity = 48/105 (45.71%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 19 IRQSYMLGWNQSDLVDEGGDMFITLSARGIEGQGTIAIGFGGRSMETADDFVICVVESKTSAECTDHSGPGARFNPLPDDEENNELDVVSMGVDGEWTSATFARS 333
+ SY + W V E M ++LSA+GI G + IG+GG +M A DFVIC V S T AEC D G R P PDDE++ L+V+S+ V+GEWT+ F RS
Sbjct: 700 LSDSYSIAWE----VLEDNTMTMSLSAKGIGDTGMLGIGWGGLTMSDAQDFVICEVLSSTEAECIDRQATGGRSVPEPDDEDDPYLEVLSVEVEGEWTTVQFLRS 800
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: D7FX04_ECTSI (Dopamine beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 2.360e-16 Identity = 45/105 (42.86%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 19 IRQSYMLGWNQSDLVDEGGDMFITLSARGIEGQGTIAIGFGGRSMETADDFVICVVESKTSAECTDHSGPGARFNPLPDDEENNELDVVSMGVDGEWTSATFARS 333
+ SY + W ++V++ M ++LSA+GI G + IG+GG +M A D+VIC V S T AEC D G R P PDDE++ L+V+S+ V+G+WT+ F RS
Sbjct: 66 LSDSYSVAW---EMVEDN-TMTMSLSAKGIGDTGMLGIGWGGLTMSDAQDYVICEVLSSTEAECIDRQATGGRSLPDPDDEDDPYLEVLSVEVEGDWTTVQFLRS 166
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: D7G7J1_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 8.800e-11 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 3
Query: 462 GDGIGKHPNSQRGATQINFKDRSVADKQCSDSSEHYSLNGALVLMTWMIIAPYGIYQAR 638
G+G+G+HPN+ RGA INF V D QC + SL+GAL+L+ WMIIAP+GIY AR
Sbjct: 621 GEGVGQHPNTNRGAATINFVTGDV-DTQCDGETSFVSLHGALMLIAWMIIAPWGIYYAR 678
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: D7G7J2_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 1.610e-10 Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 3
Query: 462 GDGIGKHPNSQRGATQINFKDRSVADKQCSDSSEHYSLNGALVLMTWMIIAPYGIYQAR 638
G+G+G+HPN+ RGA INF V D QC + SL+GAL+L+ WM+IAP+GIY AR
Sbjct: 622 GEGVGQHPNTNRGAATINFVTGDV-DTQCDGETNFVSLHGALMLIAWMLIAPWGIYYAR 679
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: A0A6H5JQ31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ31_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 7.180e-10 Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 3
Query: 462 GDGIGKHPNSQRGATQINFKDRSVADKQCSDSSEHYSLNGALVLMTWMIIAPYGIYQAR 638
G+G+G+HPN+ RGA INF V D C + SL+GAL+L+ WM+IAP+GIY AR
Sbjct: 606 GEGVGQHPNTNRGAATINFVTGDV-DTHCDGETNFVSLHGALMLIAWMLIAPWGIYYAR 663
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: A0A6H5JBZ5_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBZ5_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 1.620e-7 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 3
Query: 462 GDGIGKHPNSQRGATQINFKDRSVADKQCSDSSEHYSLNGALVLMTWMIIAPYGIYQAR 638
G+GIG+HPN RGA +NF +V + +C D + L+GAL+L+ WM++AP GIY R
Sbjct: 323 GEGIGQHPNGNRGAATVNFATGNV-EAECDDD-DFVLLHGALMLVAWMVLAPLGIYYVR 379
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: D7FQW8_ECTSI (Peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 61.2 bits (147), Expect = 2.250e-7 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 3
Query: 462 GDGIGKHPNSQRGATQINFKDRSVADKQCSDSSEHYSLNGALVLMTWMIIAPYGIYQAR 638
G+GIG+HPN RGA +NF +V + +C D + L+GAL+L+ WM++AP GIY R
Sbjct: 590 GEGIGQHPNGNRGAATVNFATGNV-EAECDDD-DFVLLHGALMLVAWMVLAPVGIYYVR 646
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Match: A0A6H5JWZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ0_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 3.420e-7 Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 3
Query: 462 GDGIGKHPNSQRGATQINFKDRSVADKQCSDSSEHYSLNGALVLMTWMIIAPYGIYQAR 638
G+ +G+HP S RGA INF +V + +C D + SL+GAL+L +WMI+AP+GIY R
Sbjct: 252 GESLGQHPTSSRGANTINFATGNV-EVEC-DENNFVSLHGALMLTSWMILAPWGIYYVR 308 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11904.1625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11904.1625.1 >prot_Ecto-sp13_S_contig11904.1625.1 ID=prot_Ecto-sp13_S_contig11904.1625.1|Name=mRNA_Ecto-sp13_S_contig11904.1625.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=187bp MLGWNQSDLVDEGGDMFITLSARGIEGQGTIAIGFGGRSMETADDFVICVback to top mRNA from alignment at Ecto-sp13_S_contig11904:1028..3825+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11904.1625.1 ID=mRNA_Ecto-sp13_S_contig11904.1625.1|Name=mRNA_Ecto-sp13_S_contig11904.1625.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2798bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11904:1028..3825+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11904:1028..3825+ >mRNA_Ecto-sp13_S_contig11904.1625.1 ID=mRNA_Ecto-sp13_S_contig11904.1625.1|Name=mRNA_Ecto-sp13_S_contig11904.1625.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=561bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11904:1028..3825+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |