mRNA_Ecto-sp13_S_contig119.1615.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig119.1615.1
Unique NamemRNA_Ecto-sp13_S_contig119.1615.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: D7FX94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX94_ECTSI)

HSP 1 Score: 503 bits (1296), Expect = 8.500e-173
Identity = 275/282 (97.52%), Postives = 279/282 (98.94%), Query Frame = 1 
Query:  202 MSDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSIKIHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAADADAAAPKKRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEAACPEQPLGPGMLE 1047
            MSDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDE+QRVKLENLATQ VTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQS+KIHRDQLDNNFLATVQAWMEKS KEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEA +ADAAAPKKRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGV+KDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEAACPEQPLGPGMLE
Sbjct:    1 MSDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEQQRVKLENLATQ-VTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSMKIHRDQLDNNFLATVQAWMEKSGKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAGEADAAAPKKRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVTKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEAACPEQPLGPGMLE 281
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BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: A0A6S9G5L4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9G5L4_HETAK)

HSP 1 Score: 172 bits (435), Expect = 9.690e-45
Identity = 108/272 (39.71%), Postives = 178/272 (65.44%), Query Frame = 1 
Query:  193 SIRMSDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSIKIHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAADADAAAPKKRTPAQLLLEEILNMDADKWDGVLA-GLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIE 1005
            ++RMS ++  + II+ ++ A   E+  + ++K +++VA P+FF+ +A+ A+ A  + +R  L  LAT+  T +L+ L++ AE +MD +  +++ +V SAAE +G+FLVPLS ER TA++  ++   ++LD+NFL+TV  WM+K+ +E++M GMV ILQ++LQ+YA+  + LG+  P   GEA             +  L +++L+ D + W G++  GL    R      S D L+GAIQVA+E V++QQENGSM+QRVQAEFL EL + ++
Sbjct:   46 ALRMSTNSDYEYIIDAMRAAKPEELPGI-IAKEIKKVASPSFFMAIADRADKASSDAERDALGRLATE-ATEILQELLKVAEGQMDQAGKVVEAIVVSAAEPDGQFLVPLSAERKTAMKMVLERFAEELDDNFLSTVSTWMKKA-EEDKMDGMVGILQRVLQLYAANALKLGA--PRREGEA-----------PASSQLFDDLLDSDPELWRGLVRKGLVEERR-----CSADDLMGAIQVAIESVVMQQENGSMSQRVQAEFLGELIELVK 296
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BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: A0A7S1ZNW5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNW5_TRICV)

HSP 1 Score: 167 bits (424), Expect = 1.960e-42
Identity = 119/276 (43.12%), Postives = 164/276 (59.42%), Query Frame = 1 
Query:  220 MDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKN-GEFLVPLSEERLTALRQSIK-IHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEILLGSAEPSAT----------GEAADADAAAPKKRTP-AQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEA 1008
            MD +I  L  A   E L   VSK ++ V+ P FFLR+AE A+  +D  ++ KL +L+   VT+ LE +V   E+++D+ + +++ VV +AAE + GEFLVPLS ER+ A+R+++  I    LD  FL+TV AWM KS ++  M GMV ILQK+LQ+YA  EI    A   A+          G+A +  A   K  TP A  LLE +++ D D WD  L   S       GGVS   ++G +Q  +E V+L  ENGSMAQRVQAE+L EL  RIEA
Sbjct:   99 MDDMITKLSNAKPYE-LPQAVSKAIRVVSSPRFFLRIAERADMTDDALEKAKLASLSENLVTT-LEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNKSHQD-GMDGMVAILQKVLQLYAGVEIKRARARLQASVGAAVSGQSQGQADEVVAEQEKGETPPAAALLERLMDTDPDSWDAELR-RSLAAEQEEGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIEA 370
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BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: A0A6U6C7N1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6C7N1_9STRA)

HSP 1 Score: 162 bits (411), Expect = 9.540e-41
Identity = 121/281 (43.06%), Postives = 161/281 (57.30%), Query Frame = 1 
Query:  205 SDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKN-GEFLVPLSEERLTALRQSI-KIHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAADADAAAPKKRT-----------PAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEA 1008
            S+ A MD +I  L  AP  E L   VSK ++ V+ P FF+R+AE A+   DE  + KL  LA + V + LE +V   E+++D+ +  ++ VV +AAE + GEFLVPLS ER  A+R ++ K+    LD  FL+TV AWM KS  E+ M GMV ILQK+LQ+YA  EI    A   A   AA +  +  K              PA   LE+++NMD D WD  LA   +       GV    L+G +Q  +E V+L  ENGSMAQRVQAEFL EL  R+EA
Sbjct:   86 SEIAIMDEMITKLAGAPAYE-LPQAVSKAIRVVSSPRFFMRIAERADQTSDEIMKAKLGALA-ENVVATLEAVVSTTEDRLDERAKEVEDVVKAAAEPDSGEFLVPLSAERTEAMRAALAKLDSGSLDEGFLSTVDAWMNKSH-EDGMDGMVGILQKVLQIYAGTEIKRARAALQANVGAAVSGQSQGKADEVLAETEMEGIKPAAAFLEDLMNMDTDMWDSALAKSFSD----EDGVGPKALMGEVQRTIEGVVLGLENGSMAQRVQAEFLRELVSRVEA 359
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BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: A0A7S1ZMP8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMP8_TRICV)

HSP 1 Score: 157 bits (398), Expect = 3.640e-40
Identity = 109/252 (43.25%), Postives = 153/252 (60.71%), Query Frame = 1 
Query:  292 VQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKN-GEFLVPLSEERLTALRQSIK-IHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEILLGSAEPSAT----------GEAADADAAAPKKRTP-AQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEA 1008
            ++ V+ P FFLR+AE A+  +D  ++ KL +L+   VT+ LE +V   E+++D+ + +++ VV +AAE + GEFLVPLS ER+ A+R+++  I    LD  FL+TV AWM KS ++  M GMV ILQK+LQ+YA  EI    A   A+          G+A +  A   K  TP A  LLE +++ D D WD  L   S       GGVS   ++G +Q  +E V+L  ENGSMAQRVQAE+L EL  RIEA
Sbjct:    1 IRVVSPPRFFLRIAERADMTDDALEKAKLASLSENLVTT-LEAVVSTTEDRLDERAEMVESVVKAAAEPDSGEFLVPLSAERVAAMREALADIESPDLDEGFLSTVDAWMNKSHQD-GMDGMVAILQKVLQLYAGVEIKRARARLQASVGAAVSGQSQGQADEVVAEQEKGETPPAAALLERLMDTDPDSWDAELR-RSLAAEQEEGGVSSQAIMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVTRIEA 249
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BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: A0A7S4UFJ3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UFJ3_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.790e-40
Identity = 118/277 (42.60%), Postives = 171/277 (61.73%), Query Frame = 1 
Query:  220 MDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAE-KNGEFLVPLSEERLTALRQSI-KIHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEIL---------LGSAEPSATGEAADADAAAPKKR--TPAQLLLEEILNMDADKWDGVL-AGLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEA 1008
            MD +I  L +A   E L   VS+ V+ V+ P FFLR+AE A+ A  + ++ KL  LA + + S LE ++   E+++D+ +  ++ VV +AAE ++GEFLVPLS ER+ A++ ++ K+    LD  FL+TV AWM KS ++  M GMV ILQK+LQMYA   I+         +G+A    + E AD   A  +++  TPA  LLE+++ MD D WD  L + ++A      GG+S   L+G +Q  +E V+L  ENGSMAQRVQAE+L EL  RIEA
Sbjct:   82 MDDMITKLADAKPYE-LPNAVSRAVRVVSSPRFFLRIAERADMATSDIEKEKLSALA-ENLVSTLEAVLSTTEDRLDERAKEVESVVKAAAEPESGEFLVPLSAERVNAMQTTLRKLDPISLDEGFLSTVDAWMNKSHQD-GMDGMVGILQKVLQMYAGTAIVRARSQLQANVGAAVSGQSQEQADKVIAKEEEKGLTPAAALLEKLMAMDTDLWDAELRSNITA-----EGGISPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIEA 350
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BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: A0A7S2MXS5_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MXS5_9STRA)

HSP 1 Score: 158 bits (399), Expect = 3.740e-39
Identity = 115/282 (40.78%), Postives = 172/282 (60.99%), Query Frame = 1 
Query:  202 MSDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKN-GEFLVPLSEERLTALRQSI-KIHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEIL---------LGSAEPSATGEAADADAAAPKKR--TPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEA 1008
            +++ + MD +I  L +A   E L   VS+ ++ ++ P FFLR+AE A+ A D+ ++ KL  LA + + S L+ +V   E+++D+ +  ++ VV +AAE + GEFLVPL+ ER+ A+++++ K+    LD  FL+TV AWM KS ++  M GMV ILQK+LQ+YA   I          +G+A    T E AD   A  +++  +PA   LEE++ MD D WD  L   S +G    G +S   L+G +Q  +E V+L  ENGSMAQRVQAE+L EL  RIEA
Sbjct:   79 VAEISTMDDMITKLADAKPYE-LPNAVSRAIRVISSPRFFLRIAERADMATDDVEKEKLSALA-ENLVSTLDAVVSTTEDRLDERAKEVESVVKAAAEPDSGEFLVPLTPERVGAMQKTLRKLDPVSLDEGFLSTVDAWMNKSHQD-GMDGMVEILQKVLQIYAGTAITRARAQLQANVGAAVSGQTQEQADEVLAQEEEKGPSPAASFLEELMKMDTDLWDSELR--STIGA--EGELSPATLMGEVQRTIEGVVLGLENGSMAQRVQAEYLRELVSRIEA 353
[Close]
BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: A0A7S0XTZ8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XTZ8_HEMAN)

HSP 1 Score: 155 bits (393), Expect = 1.170e-38
Identity = 105/273 (38.46%), Postives = 165/273 (60.44%), Query Frame = 1 
Query:  193 SIRMSDSAGM--DTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSIKIHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAADADAAAPKKRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIE 1005
            ++RM   A +  D +I+ + E P  E+  + V+  ++ V+QP+FF+++AE A+ A DEE + KL  LA   V + LE ++   EEKMDD+S L+Q +++SAAE+NGEF VPL  ER+  +R  +K  R+ +D   LATV A+M+K++ E+++ G+V+ILQK+LQ++A++E++                        P   +LE +L  +  +WDG+L    A G   T     + +  A+Q  VERV+LQQ +GS  QRVQAEFL EL  R++
Sbjct:   75 ALRMQVEADLTPDELISKMLEVPAYEMPNI-VAANIKAVSQPSFFIKIAERADEA-DEEGKEKLSALADN-VVATLEAVMARTEEKMDDASELVQTLLSSAAEENGEFDVPLKPERVAFMRAKVKEQRELIDEGILATVFAYMKKAN-EDQLDGLVLILQKLLQLWAAEELVAAG---------------------PGNEVLERLLLAEESEWDGLLQEAVAAGETDT-----ESMQSAVQSCVERVVLQQASGSHGQRVQAEFLRELLSRLK 317
[Close]
BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: A0A7R9WEL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEL2_9STRA)

HSP 1 Score: 155 bits (392), Expect = 3.490e-38
Identity = 113/276 (40.94%), Postives = 164/276 (59.42%), Query Frame = 1 
Query:  220 MDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAE-KNGEFLVPLSEERLTALRQSI-KIHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAA-------DADAAAPKKRT----PAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEA 1008
            MD +I  L +A   E L   VSK ++ V+ P FF+R+AE A+   D+  + KL  L+ + V + LE +V   E+++D+ +  ++ VV +AAE ++GEFLVPL+++R+ A+R+++ K+    LD  FL+TV AWM KS ++  M GMV ILQK+LQ+YA  EI    A+  A   AA        AD    ++      PA  LLE+++ MD D WD  L+   +   G    V    L+G +Q  +E V+L  ENGSMAQRVQAEFL EL  R+EA
Sbjct:   87 MDEMITKLADAKPYE-LPQAVSKAIRVVSSPRFFMRIAERADQTTDKVMKAKLAALS-ENVVATLEAVVSTTEDRLDERAKDVEDVVKAAAEPESGEFLVPLTKDRVDAMREAMEKLDSASLDEGFLSTVDAWMNKSHQD-GMDGMVGILQKVLQIYAGTEIKRARAQLQANVGAAVSGQSQGKADEVLAEEEKGGLKPAAALLEDLMEMDTDLWDSELSKSFSDENG----VGPKALMGEVQRTIEGVVLGLENGSMAQRVQAEFLRELVSRVEA 355
[Close]
BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Match: A0A6T8FN14_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8FN14_9STRA)

HSP 1 Score: 154 bits (388), Expect = 4.940e-38
Identity = 111/265 (41.89%), Postives = 156/265 (58.87%), Query Frame = 1 
Query:  220 MDTIINDLKEAPDVEVLTLKVSKCVQQVAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMDDSSSLLQIVVTSAAEK-NGEFLVPLSEERLTALRQSI-KIHRDQLDNNFLATVQAWMEKSSKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAADADAAAPKKRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVSKDGLLGAIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEA 1008
            +D +I  L  AP  E L   VSK ++ V+ P FFLR+AE  + A  + ++ KL  LA   V S LE +V   E+ +DD++  ++ +V +AAE  +GEFLVPL  ER+ ++R+ + +I   +LD  FL T+ +WM KS ++  M GMVVILQK+LQ+YA   I         TG+A           +PA +L EE+LNMD D WD  L      G  +   +S + L+  IQ  +E V+L  ENGSMAQRVQAE+L EL  R+EA
Sbjct:   72 IDDMITKLLAAPSHE-LPRVVSKAIRVVSSPRFFLRIAERTDMATSDAEKDKLSELAGNLV-STLEAVVSTTEKVLDDTALDVENIVKAAAEPLSGEFLVPLLPERIASMREVMDQIESPRLDEGFLTTIDSWMNKSGQD-GMDGMVVILQKVLQIYAGTVITRARN----TGDAP----------SPAAVLFEELLNMDTDNWDFQLRNKIGEGEEL---LSSEALMAEIQRTIESVVLGLENGSMAQRVQAEYLRELITRVEA 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig119.1615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX94_ECTSI8.500e-17397.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6S9G5L4_HETAK9.690e-4539.71Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S1ZNW5_TRICV1.960e-4243.12Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U6C7N1_9STRA9.540e-4143.06Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1ZMP8_TRICV3.640e-4043.25Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4UFJ3_9STRA3.790e-4042.60Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2MXS5_9STRA3.740e-3940.78Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A7S0XTZ8_HEMAN1.170e-3838.46Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7R9WEL2_9STRA3.490e-3840.94Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A6T8FN14_9STRA4.940e-3841.89Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig119contigEcto-sp13_S_contig119:1119..8092 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score510.8
Seed ortholog evalue5.2e-142
Seed eggNOG ortholog2880.D7FX94
Model size2069
Hectar predicted targeting categorysignal peptide
Exons8
EggNOG free text desc.isoform X1
EggNOG OGs28HUF@1,2QQ5J@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_004040.1
Cds size1050
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig119.1615.1prot_Ecto-sp13_S_contig119.1615.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig119 1119..7073 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462628.5214705-CDS-Ecto-sp13_S_contig119:1118..13221681462628.5214705-CDS-Ecto-sp13_S_contig119:1118..1322Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig119 1119..1322 +
1681462628.5312388-CDS-Ecto-sp13_S_contig119:1573..16491681462628.5312388-CDS-Ecto-sp13_S_contig119:1573..1649Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig119 1574..1649 +
1681462628.5408885-CDS-Ecto-sp13_S_contig119:2747..28631681462628.5408885-CDS-Ecto-sp13_S_contig119:2747..2863Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig119 2748..2863 +
1681462628.550855-CDS-Ecto-sp13_S_contig119:3288..33771681462628.550855-CDS-Ecto-sp13_S_contig119:3288..3377Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig119 3289..3377 +
1681462628.5603433-CDS-Ecto-sp13_S_contig119:3904..40131681462628.5603433-CDS-Ecto-sp13_S_contig119:3904..4013Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig119 3905..4013 +
1681462628.5701334-CDS-Ecto-sp13_S_contig119:4925..50001681462628.5701334-CDS-Ecto-sp13_S_contig119:4925..5000Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig119 4926..5000 +
1681462628.5799024-CDS-Ecto-sp13_S_contig119:5824..60641681462628.5799024-CDS-Ecto-sp13_S_contig119:5824..6064Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig119 5825..6064 +
1681462628.589246-CDS-Ecto-sp13_S_contig119:6932..70731681462628.589246-CDS-Ecto-sp13_S_contig119:6932..7073Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig119 6933..7073 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462628.598703-UTR-Ecto-sp13_S_contig119:7073..80921681462628.598703-UTR-Ecto-sp13_S_contig119:7073..8092Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig119 7074..8092 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig119.1615.1

>prot_Ecto-sp13_S_contig119.1615.1 ID=prot_Ecto-sp13_S_contig119.1615.1|Name=mRNA_Ecto-sp13_S_contig119.1615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=350bp
MAGATRALRALSVVMTAVVARSFLTPSHGQHFVTRAAAGNKHDAAVSRTG
CRRTPVSTRTAPVGSIRMSDSAGMDTIINDLKEAPDVEVLTLKVSKCVQQ
VAQPAFFLRLAELAETAEDEEQRVKLENLATQQVTSVLERLVEFAEEKMD
DSSSLLQIVVTSAAEKNGEFLVPLSEERLTALRQSIKIHRDQLDNNFLAT
VQAWMEKSSKEEEMQGMVVILQKILQMYASQEILLGSAEPSATGEAADAD
AAAPKKRTPAQLLLEEILNMDADKWDGVLAGLSAVGRGMTGGVSKDGLLG
AIQVAVERVILQQENGSMAQRVQAEFLSELCKRIEAACPEQPLGPGMLE*
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mRNA from alignment at Ecto-sp13_S_contig119:1119..8092+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig119.1615.1 ID=mRNA_Ecto-sp13_S_contig119.1615.1|Name=mRNA_Ecto-sp13_S_contig119.1615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6974bp|location=Sequence derived from alignment at Ecto-sp13_S_contig119:1119..8092+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAGGGGCAACTCGGGCACTCAGAGCCCTATCTGTGGTTATGACTGC
AGTCGTAGCGAGGAGTTTTCTCACGCCTAGCCACGGCCAACATTTTGTTA
CAAGAGCAGCGGCAGGTAATAAACATGACGCCGCTGTCTCGCGCACGGGA
TGCCGACGAACACCAGTGTCAACTAGGACAGCTCCCGTCGGTAGCATTCG
TATGGTAAGTGTGGTTCAGCATCGTGCTTGTTTTGCGTCGGCTTGGTTTC
AGAATTCAGTGATCCAACCCTCTTAATAGCAGCACTGCTGTAGCAGCATC
GGCGGAAAACATCAACATGTTCAGCCCGCATGTGAGTTCGGTGTGGTACG
TCACCAACGGAGAGGCAGCGAATCTGTGCTCTCTGTTCGACGATTTCCGT
TCAAAAAATCCCACCCCTGCTCCTTGCGGTCTGTACTCCGTTGGTTCCTG
CCTAGTCCGATTCGGCGGGTATGGACACGATCATCAACGACCTGAAGGAG
GCGCCAGATGTCGAGGTCTTGACGCTCAAAGGTGGGAGCTCCTCTTTGTG
CAGTTAACACCACGGGTGCTATCTACCGTATGTTTTGTAGGAACACCGGC
TTACATAAAAAATTGAATTGCTTGGAGCACAGGCCGGTAGCTGTGCGATG
TCGTGCGCCGGATGCTTTTGCCTTTTGATCAAGAGTAGGGCCGTCCTGAG
TCGAGGATCGATCACTAGCACTGGTTTTCGGGGTTTCCAGTGAACTTCTA
CCGTCCACGGCTTCAACTTTTCAGCCCTCGCACCCCAGAGAAGGACGGGT
TGGGTATTGGCTACATCCGCTCGCTCTGATTTAGCTCATGGTTGCAGAGG
CTGCTTGTATAGCAGACTGCACGTGACAGAGAAGGGCATGTTGGCTGCAT
CCGCTCGCTCTGTTTAGCTCGTCATTGCAGAGGCTCGTAGACTAGTCTAA
ACGTCACAGAGAAGGACGGGTTAGCTACATGCGCTCGATTGTGTTTTTTA
TTCCGTCGTTGAAAAGGCTAGAGTGTAGACTACCTGGTGGTACACATCAT
GACCGTCGTCGTTCGCACTCTCTCTCTCTCTCTCTGATTGAAGCCCTCCT
TCCGGGACAACTCGGATGAGGCCATCTGCGGTGCCTCTAGTTGTGTTTAT
CGCGAGAAGGTTGCAGCATCTCTCTTTCCTCGAGTGCACTCCGCGACGAA
GTGCTACGCTTTCTTTGGGTTCGACACTCGTACAACACAAGAAACACACA
ACCTCACCGTGACTCTCCACCTGGCCGCCAGAAGGTACTTTCGGAGGTCA
CCAACTCCTCGTGGACTACTGGACTCGCTTCTGATGGCCGCATCATGCGC
GGGACATGGTTATTGCTACAGTATTAGAAAGCCGGCGAAGAGGTTATCTT
GGAATGAAAAAGAATGGGTGCTGCCCAGGCCGGACATTGAGTACCACACG
AGGCCGAGCAAGCTCTGACGGAGAGCGTGGTTTCAAGTGTATTTCGAAAC
CAAGAGGTGGTATGAAAACGCCTCTTTCGCTGCACCATATGTGTCTTATG
GCGGAAAATTGCACGATTCGAGCATGGGATGACACGCGTGCCCCCACATC
CCTCCTTCCGTCCGTCGCTTGGCAAACAGTTTCCAAGTGCGTCCAGCAGG
TGGCACAGCCGGCTTTCTTCCTCCGACTAGCGGAGCTTGCGGAGACAGCG
GAGGACGAAGAGCAGCGGGTCAAACTCGAGAACCTCGCCACACAGGTGCG
CTCTGCTCCACCGATGGCGTTTGATTCAGAGACCCAGTTATGTATTGTGC
GACAAGTGTGCCTAAGGTTCAATATTTCCCAGCCAGAAAGTTTGTACCTG
GGGTTATTATGTTTCCCAGCTATGAAGTGAACGTGTGCCCGAGGTTTCCC
GGCGATGAATTGTACGTTACGTTTCTCTTGTGGCATCATGGTGCCCATCA
TGGTGTAGCACCGCTCTGCGTGGCGTTTGGTCACATTTCCAACAGATGTA
CGCAGCAGCAGTTTCTCGTCGACGTGTGCGAGGCGGACCGATCTGACCTG
CTGTGTGCCTGCACGCAAATCTAATAGGACCTTAACGGTCCCTCTGGGTT
GTTTTCTCTCACTCGCTGTTTTGTCGCGACGCGCCGTCATCGCCACCACT
GCTCACCCTCGCGAGTGGAGCAGGTTACCAGCGTGCTCGAGAGGCTGGTG
GAGTTTGCGGAGGAAAAAATGGACGATTCTTCGTCCCTCCTACAGATCGT
AGTCACCAGGTGCGTTAAGTTTGGGGTCCCGTTTACACGTTTTCATACGT
CGCGGGTTTCCTGGGGGTGACTTCGCTATACGTAATCGGGCGGTTATTCC
TCTTGGGTGTGTGCCCTCATGGTACTCCAGTATACCTCAAGGCATTTGAT
ATTTTCATGTTGTATAGCTCGACGATCAACGCAGCGCATGGCCTTGGCGA
GGCTCGAGTGGCACCAGCAGCTAGCGCTGCCAAAAAACGTAGCACGTCCA
TCGCCCAAGCCGGAACTGATTGAATTTTCTGACTGGGTTTAATGTAGACA
TGCAGGAGTTCACCTGATTTGATGTCCTTAGTGTGAGAGTAGGCACACGT
AGTAGGTGAGATGATTTAATTTCCTTGACGTACGAGAAGACGCGTGAACT
GATTGAATTTCCTGCGCGTACGAGTATTTAGTAGACGTGTACAAGGTGTT
TGTGTTGTGGTGTCTTTTTCGTGTGTGTGTGTTTTTGTTTTGTTTTAATT
GATGTCTTGTTGTGTGTGCGCGTGTTTTTTCCGCAGCGCCGCCGAGAAGA
ACGGAGAGTTCCTGGTCCCCCTCTCCGAGGAACGCCTGACCGCGCTGCGC
CAAAGCATCAAGATTCACCGAGACCAGCTCGACAACAACTTCCTCGTGCG
ACACGGCAGAAGTAGTCTCCTTCGTAGTGCTTTGAGTCTCCTCCTCTTTT
GTTTTCATGTGTCCTTTCGTTGGTATCGACCGAGCAAACCGGCCGAACAT
TGAGAGGTCGTTTTTCAGTTCGCTAGCGCCCTTTCTTTCTAGCCAGCGGG
CTGAGTCTCCTTCCTTGTTTGCGTGTGTTGCGTGTGTTTCTTTGATTGGG
ATCGACCGCATTTGCGGCTGACTAATGAGAGATCGTTGGTAAAATTCACT
AACGCGCTTTCTTATTGAGCGGACTCCCCCGACAAGGTAACCGCGGACGA
GATTGGATGACATGGTCCAGTCTCCTGAATGACAGTAGTCCTTGTTTGTT
GTTGCTGCTGTTGCCGTTGTTGTCTTCATAAGGGAAAACAGGCAACACAC
CATTTCGTAGCGTTCCGTCTGCGGCATCTATTCTTGTATGCGTGTCTGTC
TCTCACCACAAGACGTTATTGTCGCAGGTTTCCATCGTTTCCCCCCCGAT
CCATATCGCACCGCTTTTATTTGAAAGGTCCAATAGTGGTACTGCTCGGA
ATGTACCGGGAGTTGTTTTGTGGGAGCCAGCCCTCGGCTCTGCCCGGTGC
TGGCAGCACCATGTTTCTGCCTTCGTACGTCGGTTTCGCGCAACCACCGA
CCACGCGATCACCTCTTGCAACGCACTAGCCCAATACAACTTAGCACCTA
GGTTCGCATTGCAAATGGGTACACACCATCTGAAAACACAAGAGAAAATA
CAACTTCATAACATCCTCAAGTCCAACATTGATTGAACACCCCAAACATG
ACTGAAAAACCCTACATGTGTCCACACCATCCGTTGGAACACCGCCACCC
TCGCATCAACAAACGCTTGCCATCATCCGCTCGACATTCCTCCCTTCCCT
GCGAAAGGCTACGGTCCAAGCGTGGATGGAGAAGAGCAGCAAGGAGGAGG
AGATGCAAGGAATGGTCGTCATCCTTCAGAAGGTATCTTCAGCAGCAGCG
TTTTGCAGCAGCTCTCGGCTGGCTTGACTTATTCGGTAGACCTTTGAGAC
GTGCTTAGGCATGGTCTCCGTGCTGCATTTCGCGTCGTATTTTCCGCTGT
TGGCATGTTCCACTCATGCAAGTCAACCCATTGCCGAACGGTAATACCGC
GACCTCGGGTGCAACCATGAGGTAGAAAGGGACCTTACGCGGGGCGGTAC
ATCCTTTCAGTTGCGGCTCATTGTCTGTAGAGTGTTGTGGTGCATGAACA
GCCGCGGGCGGTTTGTAAAAGAAGACGCGGCAGGACGCAAGTTGGGTCTT
GCTTCGGGTATGCGTTCTTGACGGTATGGCGTGCCGTAGATGATACAATT
TTCCTCACATCTGCGCTTAGCGTTTGCTGGAATACGGCAGTATGCTGCCG
GTATGCTGTGTAATGTTCGTGCACTCAGGAGGTCGCGGAAGGCCGTGTTC
AAGGCTTATGGGCAACACTCTCTCTGTGTGTCAGACACGAACAGCCAGGA
CTAACTTTTCCGGAGGCGAGAAGAATAGAATTTTTTATGTTGCGCTGACC
ACGACGAGCTCGAAAGGAGCGATCATTCATCTGTAGGGAGCACCGGGAGT
ATATGTTCTGTGGAGATTCAAGTTACTTGTCATACCCCGAAGGCCAAACC
TAGCCCTTTCCGCCTACATATAACCCTTGCCGCGTCTCGCGATCAAACTT
CGTACAACGTCGAAATCGGCATGCTTCCCAACCACTCTCCCACCCCCCGC
CCTCTTCTGCAACATTACATTACTCTTTGCCCGCCCTGTTTTGCCGTTAC
ACGCAGATCCTTCAGATGTATGCGTCGCAAGAAATTCTCCTGGGCAGCGC
CGAACCCAGCGCTACCGGCGAGGCCGCCGACGCCGACGCCGCCGCTCCCA
AGAAGCGCACCCCCGCCCAGCTCCTCTTGGAGGAGATCTTGAACATGGAC
GCCGACAAGTGGGACGGTGTGCTGGCCGGCCTTTCCGCGGTGGGGCGAGG
CATGACCGGGGGCGTTTCGAAGGATGGACTCTTGGGGGCCATCCAGGTGG
GAAGTGGATATGTTTCTGGCTGAGGCGGCGAGAGGGGTATGGGTGCTCAT
CGCCGTGCATGCCGTAGTCGTTTGTCCATTGGCCTCGCATCCCTACAAAG
CCGGGACAGAGCGGTATGCCGGGTTTTGCACCGGACCAGGCCACATGGCA
CTGGCCAAGCGCGAATTCCCGTGCCGTTAGGTATTCGGGGAGAGTTGCGC
TGCATTCTGCTAAGGGAGGTGGCGAGGGGGCGGCTCAACGGTGGTTTTGC
CGGTCGCGCATGGGGTCAGAAGCGGGTCGTTTTCGCATGAGATTTGGGGG
AAAGAGGCAGCGTCGGCCGCTACCTGAGCTGCCGCCGCTCGACCACAGTG
GGCACCGGCCATAACGGACGGTGTGCGGGTTGTGCAAGTCCGGCGGCTCC
GCCACACGTATCGCACTGCGTTCCGCCGTACTTCTGTCTCTCGCGGAGGA
GGGGTGCTTTTGTCGACGACGTTGCACTAGGGCAAACTTGCCACATCATG
CTGCTGCCGATATGGTCTTCTTCTGTGTTTTTTCTACGCTATTCTAGGTC
GGCCCACCGGTGCAGGAGGGCGCACACGCAAACAGGGAGAGCAGGAACTA
CATAATTAACTATTTTAACACATCCGTGTTGCATGTGTTCCACATCCCTT
GGCCTTTCTTTCCGGCCTCAAAAAGTACAGCGGTGTGTGTTGTGATGATG
CGTGCACATACGTTGCTCGGTGCGCATGGATAGTGCGGTATGTTATGATG
CACACACACATTGCGCATGGATAGATGGCGACGAAAAAAACGCTCTTGTC
TTTCGTCCGACCGCCTCTGCCATTGCCAACCGACCCCACCCGTGTGCGCG
AAACACGACAACAGGTGGCAGTAGAGAGGGTGATCTTGCAGCAGGAGAAC
GGCAGCATGGCCCAGAGAGTGCAGGCCGAGTTCCTGTCGGAGCTCTGCAA
GCGAATAGAGGCCGCCTGCCCCGAGCAGCCGCTGGGGCCGGGGATGCTTG
AGTAGTCAGGCGCGGCGGCTGCCCCGCCACACCTGTTGGCTGCTGCTTGC
CAGCGGACCACCTTTGTGCACGGCCCTCTTCTTGCCCGGGAAAACCCGTT
GTTGCGTGGTTTGTTGAAAACTGTAGATAGCTTTTTGCTTTCAGTTGCCG
GCTGTCCTGTTCTCTTTTCTCCGGAGCACCCCCGCCCCCCCTCCCACCGT
CGTTGTTGCGCTATTGCCGCACGCTACTGCTGCACAGGGCGTCACCTGGT
GTGGGTGCGAGATTCTGTTGTCATGTTCGCCTACAGTAGCCGGGGAGGCG
AGCGCCGGCTTCGGGTTGCACAGCAAATAGTTTCCCGATAACTTAGCAAG
CTTAGCCGAGGAAGCCGTCTCGATTCTGTCTTGCACGGGCGAATGATATG
CAACGATATGCCGCGTTGCCATGTGGGGTCTTGAGACCATGTAGTCCGAT
TCTTACGCAAAAGTTCGGCTTTTGGTCCGAGAGGGATGGATGTTTTTTTT
TTGAGGGTGGTCATCGCCGAATCCCAATCGTTTGTGTCGCCTGAAGCCAG
GTGTGCTTTCCATTCCTGCCCGTTTCACTAGTCTCCCGTGGCACTGGCTG
TCGTAGGGATCAAAAGCGATCAGAGGTTTCGATGTTACGACCAGAGACTG
CTTTTTTCTCCGAGGGCTGCTATACAATAGCTCCTTTGCGTAAGTAGGCT
AGTCGCATTGTCCTCATTGGCTGTTTCGCGAACGAGAGGTTATGTTTCCC
CTTGATGGAGACCCGGCACGAGAAAACCAGCTTGTGCCGGTACAGCCGTG
CTCGACGGGTTTGATCTGTTCATCGTTCACATTATAAAGGACCTCCCTGG
CGAAGACACAGCAACGTGATCTGTGCGACCATGAGGAATGGTTGGACCTT
GAGCTCAACTCTAGTCTAATAACCGCGGAAGTTTGTTCCTTGTCTTCTTG
AAGAAAAGGTTTGAGGAGAAGGGGCGTAAGAGAAAGGTCAAAACGATTTG
TCCGTGGAAACTTCATTTCGTGTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig119:1119..8092+

>mRNA_Ecto-sp13_S_contig119.1615.1 ID=mRNA_Ecto-sp13_S_contig119.1615.1|Name=mRNA_Ecto-sp13_S_contig119.1615.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1050bp|location=Sequence derived from alignment at Ecto-sp13_S_contig119:1119..8092+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCAGGGGCAACTCGGGCACTCAGAGCCCTATCTGTGGTTATGACTGC
AGTCGTAGCGAGGAGTTTTCTCACGCCTAGCCACGGCCAACATTTTGTTA
CAAGAGCAGCGGCAGGTAATAAACATGACGCCGCTGTCTCGCGCACGGGA
TGCCGACGAACACCAGTGTCAACTAGGACAGCTCCCGTCGGTAGCATTCG
TATGTCCGATTCGGCGGGTATGGACACGATCATCAACGACCTGAAGGAGG
CGCCAGATGTCGAGGTCTTGACGCTCAAAGTTTCCAAGTGCGTCCAGCAG
GTGGCACAGCCGGCTTTCTTCCTCCGACTAGCGGAGCTTGCGGAGACAGC
GGAGGACGAAGAGCAGCGGGTCAAACTCGAGAACCTCGCCACACAGCAGG
TTACCAGCGTGCTCGAGAGGCTGGTGGAGTTTGCGGAGGAAAAAATGGAC
GATTCTTCGTCCCTCCTACAGATCGTAGTCACCAGCGCCGCCGAGAAGAA
CGGAGAGTTCCTGGTCCCCCTCTCCGAGGAACGCCTGACCGCGCTGCGCC
AAAGCATCAAGATTCACCGAGACCAGCTCGACAACAACTTCCTCGCTACG
GTCCAAGCGTGGATGGAGAAGAGCAGCAAGGAGGAGGAGATGCAAGGAAT
GGTCGTCATCCTTCAGAAGATCCTTCAGATGTATGCGTCGCAAGAAATTC
TCCTGGGCAGCGCCGAACCCAGCGCTACCGGCGAGGCCGCCGACGCCGAC
GCCGCCGCTCCCAAGAAGCGCACCCCCGCCCAGCTCCTCTTGGAGGAGAT
CTTGAACATGGACGCCGACAAGTGGGACGGTGTGCTGGCCGGCCTTTCCG
CGGTGGGGCGAGGCATGACCGGGGGCGTTTCGAAGGATGGACTCTTGGGG
GCCATCCAGGTGGCAGTAGAGAGGGTGATCTTGCAGCAGGAGAACGGCAG
CATGGCCCAGAGAGTGCAGGCCGAGTTCCTGTCGGAGCTCTGCAAGCGAA
TAGAGGCCGCCTGCCCCGAGCAGCCGCTGGGGCCGGGGATGCTTGAGTAG
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