mRNA_Ecto-sp13_S_contig11866.1595.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: D8LH20_ECTSI (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH20_ECTSI) HSP 1 Score: 553 bits (1426), Expect = 1.150e-194 Identity = 268/273 (98.17%), Postives = 271/273 (99.27%), Query Frame = 3
Query: 3 NRGIRVVTYDAVADATAAQAGLAAGLSLRMGRTVAVHFCSLVPPKPQEGLRCTSETAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRTTRISFTFRRVRDPAVACGCDFAKSCDRETPVATATFLKKG 821
NRGIRVVTYDAVADATAAQAGLAAGL+ RMGRTVAVHFCSLVPPKP+EGLRCTSETAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEY+PGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRR TRISFTFRRVRDPAVACGCDFAKSCDRETPVATATFLKKG
Sbjct: 78 NRGIRVVTYDAVADATAAQAGLAAGLAPRMGRTVAVHFCSLVPPKPREGLRCTSETAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEYKPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRATRISFTFRRVRDPAVACGCDFAKSCDRETPVATATFLKKG 350
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: L1ISM5_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ISM5_GUITC) HSP 1 Score: 190 bits (483), Expect = 1.320e-50 Identity = 103/237 (43.46%), Postives = 140/237 (59.07%), Query Frame = 3
Query: 75 GLSLRMGRTVAVHFCSLVPPKPQEGLRCTSETAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRTTRISFTFRRVRDPAVACGCDFAKSCDRE 785
GLS ++ C P +P + CTS + + V GL L + F++ EE L Q D++ W L RRVQHFG FDY TR V+ P L + + L +PDQ T+NEYQPGQGI HVDTHSAFEDG+ S+SLGS VM+ R PDG+ KN+ L GS L M+G +RY+W+HGI++RK+D+VDG +R R+S TFR+++ C C+F + CD +
Sbjct: 115 GLSGKLVHVQYAEACEKRPGEPNPAIPCTSLSKDLVVEGLILKEDFLSPEESEDTLN---QLDELEWESSLSRRVQHFGFTFDYATRRVN-TLKTRAFPPFLLRIAQRALREKLLLFEPDQCTVNEYQPGQGIRSHVDTHSAFEDGILSVSLGSSVVMEFRSPDGLS-KNVQLKPGSALSMQGESRYKWAHGISNRKSDLVDGKFVQRCRRVSMTFRKIKTSP--CKCEFPEQCDSQ 344
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: A0A6B2LAX0_9EUKA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAX0_9EUKA) HSP 1 Score: 179 bits (453), Expect = 8.630e-49 Identity = 91/185 (49.19%), Postives = 123/185 (66.49%), Query Frame = 3
Query: 180 DVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRTTRISFTFRRVR 734
+VPGL +++ F++EEEE +L+ Q +W +R VQH+G + Y T VD D LP TD+V+ M D G+ PDQLT+N+Y+PG GI PHVDTHS FE+ L SLSLG+ +M+ RHP+G ++ + LPR SL++M+G +RY WSHGIA RKTD++DGV R RIS TFR R
Sbjct: 119 EVPGLIMMEQFISEEEEQHILEALNQS---QWIRLSQRYVQHYGYAYRYETNDVDPDHKIGDLPTFTTDIVKRMMDTGMVEHIPDQLTVNKYKPGSGIPPHVDTHSIFEEALISLSLGAPVIMEFRHPEG-QIIPVLLPRRSLIIMKGESRYLWSHGIAPRKTDLIDGVQVPREERISLTFRITR 299
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: A0A813IB55_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IB55_POLGL) HSP 1 Score: 180 bits (456), Expect = 1.170e-48 Identity = 100/225 (44.44%), Postives = 131/225 (58.22%), Query Frame = 3
Query: 162 SETAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPDGVRV--------------KNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVD-GVLTRRTTRISFTFRRVRDPAVACGCDFAKSCDRETP 791
+ TA V+VPGL ++ FV++EE +LL D W +KRRVQH+G FDY + P LP VVR + + GL P +QLT+NEY+PG GI+ HVDTHSAFEDG+A+++LGSG VM+ R P + KN++LP SLLVM G ARY W HGIA RKTD ++ G + R+ R+S TFRR R C C + CD + P
Sbjct: 115 ASTAHVEVPGLQVLPYFVSDEEAKALLAAV---DANAWDTTIKRRVQHYGHAFDYARLTIAEGGDVPELPSFCGGVVRRIAESGLMPEQVNQLTINEYEPGVGIALHVDTHSAFEDGIAAVTLGSGLVMEFRRPQLIGAACSSAGSPPAEASQKNVWLPPNSLLVMSGEARYAWQHGIAWRKTDCLEEGEVLPRSRRVSLTFRRARGRP--CDCRWPSMCDGQNP 334
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: A0A812SEG8_9DINO (ALKBH8 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SEG8_9DINO) HSP 1 Score: 178 bits (451), Expect = 4.720e-48 Identity = 99/239 (41.42%), Postives = 136/239 (56.90%), Query Frame = 3
Query: 168 TAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPD-------------------GVRV-KNLYLPRGSLLVMEGPARYEWSHGIASRKTDMV-DGVLTRRTTRISFTFRRVRDPAVACGCDFAKSCDRETPVATATFLKKG 821
T V+VPGL ++ F+T+EE SLL+ D W +KRRVQH+G FDY T + P +P +V+ + D L P + DQLT+NEY+PG GI+ HVD HSAFEDG+A+++LGSG VM+ R D G + K+++LP SLL++ G AR+ W HGIA RKTD + +G + R+ R+S TFRR R C C + CD +TP A A + G
Sbjct: 107 TQHVEVPGLHVVTDFITDEESVSLLREI---DARPWDTSIKRRVQHYGHAFDYATLKIAEQGTVPTMPSFAAEVISRLRDSSLMPHEVDQLTVNEYEPGVGIAFHVDAHSAFEDGIAAITLGSGIVMEFRKTDATSGKLSMGKHHRMAPPQAGAEISKHVWLPPKSLLIISGEARFAWQHGIAWRKTDCLKEGEVLPRSRRVSLTFRRARCGR-PCDCQWPALCDSQTPEAHAMPTRVG 341
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: A0A0G4IWK2_PLABS (Alkylated DNA repair protein alkB homolog 8 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IWK2_PLABS) HSP 1 Score: 182 bits (463), Expect = 7.010e-48 Identity = 112/252 (44.44%), Postives = 139/252 (55.16%), Query Frame = 3
Query: 45 ATAAQA----GLAAGLSLRMGRTVAVHFCSLVPPKPQEGLRCTSETAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPDGVRVK-NLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRTTRISFTFRRVRDPAVACGCDFAKSCDRE 785
AT AQA G +G R++ + +C + P GL S TA V VPGL L+ F+TEE+E SLL W +RRV HFG FDY T VD + PPLP L + M GL P DQ+T+NEY PG GI H+DTHSAF DG+AS++ G+ VM DG K ++ LPR SLLVM G ARY W H I R+ D +DG + R TR SFTFR V + + +C C F CDR
Sbjct: 61 ATPAQAQRVVGELSGHPALQSRSLTLTYC-MPRGDPFSGLDDVSSTARVAVPGLRLVHDFITEEQEASLLAMLTGASG--WVTLSRRRVLHFGVKFDYRTNDVDVNGVVPPLPPELQVLAERMHRDGLTPFRCDQVTVNEYVPGAGIPAHIDTHSAFHDGIASITAGAETVMTFTDDDGEGNKVDVLLPRRSLLVMNGAARYAWRHAIRCRRYDRIDGDVRERHTRTSFTFRAV-NYSRSCTCAFESKCDRH 308
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: UPI0015A8EAB5 (alkylated DNA repair protein alkB homolog 8 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015A8EAB5) HSP 1 Score: 184 bits (467), Expect = 8.290e-48 Identity = 118/284 (41.55%), Postives = 157/284 (55.28%), Query Frame = 3
Query: 3 NRGIRVVTYDAVADATAAQAGLAAGLSLRMGRTVAVHFCSLVPPKPQEGLRCTSETAGVDVPGLTLIKGFVTEEEEGSLLKHF---VQGDDVRWTGPLK-RRVQHFGRVFDYHTRHVDFDAPAPP-LPECLTDVVREMGDRGLKPSDPDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMV----------------DGVLTRRTTRISFTFRRVRDPAVACGCDFAKSCDRETP 791
N+ VTY +V +A A L G+TVA++F + + G+ CT PGL +++ F++ EEE LL+ QGD + LK RRV+H+G F Y +VD + P P +P+ V++ L PDQLT+N+Y+PGQGI PHVDTHSAFED + SLSLG+ VMD RHPDG V + LP SLLVM+G +RY W+HGI RK D+V D L++R TR SFTFRRVR +AC C + +CD P
Sbjct: 82 NKPYAFVTYGSVEEARRCHASLNGRQLQCQGQTVALYFSFVEKVGGESGV-CTELP-----PGLKVLEDFISAEEEAGLLEAIDWAPQGDTLTGQKALKHRRVKHYGYEFRYDNNNVDKERPLPGGIPQFCNSVLKRCLRENLIDVTPDQLTINQYEPGQGIPPHVDTHSAFEDTILSLSLGAKTVMDFRHPDGRSVA-VVLPERSLLVMKGESRYLWTHGITPRKFDVVPAGDTVSSGPVTSDPGDLTLSKRDTRTSFTFRRVR--RMACDCAYPSACDSRRP 356
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: A0A6G0X979_9STRA (Alkylated DNA repair protein alkB homolog 8 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X979_9STRA) HSP 1 Score: 181 bits (460), Expect = 1.550e-47 Identity = 109/246 (44.31%), Postives = 144/246 (58.54%), Query Frame = 3
Query: 6 RGIRVVTYDAVADATAAQAGLAAGLSLRMG-RTVAVHFCSLVP-PKPQE-GLRCTSETAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSDPDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRH-PDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRTTRISFTFRRV 731
RG +VT+ A A A++ L +G R V + F P P E L CTS TA + +PGL++I GF++ E E ++ D + W ++RRVQH+G F Y TR VD +AP P+P V+ +GD PDQ+T+NEY PGQGI+PHVDT F D +AS+SLGS VMD R D VK+++L RGSL +M G ARY W HGIA RK D+V G L +R R+S T R+V
Sbjct: 56 RGYILVTFSDAATAARARSALNGTSPDTLGNRKVFIQFSDNAPQPTSLEFSLSCTSATAQLVIPGLSIIDGFLSPEMEAVMIDSI---DALPWQDSIQRRVQHYGFAFRYDTRDVDVNAPLGPMPSFCNTVLTTLGDIRPDIERPDQITINEYMPGQGIAPHVDTPGVFTDYIASVSLGSDIVMDFRLVSDPSIVKHVHLKRGSLCLMVGEARYLWKHGIAYRKHDLVQGRLVKRDRRLSLTLRKV 298
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: A0A662X692_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X692_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.760e-47 Identity = 98/210 (46.67%), Postives = 128/210 (60.95%), Query Frame = 3
Query: 159 TSETAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLK-RRVQHFGRVFDYHTRHVDFDAP-APPLPECLTDVVREMGDRGLKPSD-PDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMRHPDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRTTRISFTFRRVRDPAVACGCDFAKSCD 779
TS G+ VPGL F+T+E+E + + F Q D RW +K R+VQHFG F Y TR D D P + P+P L ++ ++ G+ D PDQ+T+NEY PGQGI+ H+DTHSAF +ASLSL S VM+ RHPDGVR + + LP SL VM G +RYEW+H I R D++DG R R+S TFR++R C C F CD
Sbjct: 153 TSGPPGLRVPGLRFEPEFITKEQEAACIAFFDQQDGSRWANTVKARQVQHFGYEFSYETRRCDPDQPLSEPMPAVLQSIIDQIARCGIMDGDTPDQVTVNEYLPGQGIASHLDTHSAFTTTIASLSLCSEVVMEFRHPDGVRNEGVLLPARSLAVMSGASRYEWTHAIVPRTFDVIDGQQVDRQRRLSITFRKIRSGP--CECLFPAYCD 360
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Match: T0S0M1_SAPDV (Alkylated DNA repair protein alkB homolog 8 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S0M1_SAPDV) HSP 1 Score: 181 bits (459), Expect = 2.260e-47 Identity = 110/250 (44.00%), Postives = 145/250 (58.00%), Query Frame = 3
Query: 6 RGIRVVTYDAVADATAAQAGL-AAGLSLRMGRTVAVHFCSLVPPKPQ----EGLRCTSETAGVDVPGLTLIKGFVTEEEEGSLLKHFVQGDDVRWTGPLKRRVQHFGRVFDYHTRHVDFDAPAPPLPECLTDVVREMGDRGLKPSD--PDQLTLNEYQPGQGISPHVDTHSAFEDGLASLSLGSGCVMDMR-HPDGVRVKNLYLPRGSLLVMEGPARYEWSHGIASRKTDMVDGVLTRRTTRISFTFRRV 731
+G +VT+ V A AA++ L ++ GR + V F + PP L C S TA V VPGL++I F++ +EE SLL D W ++RRVQH+G F Y TR VD AP PLP + M L+P PDQ+T+NEY PGQGI+PHVDT F + +ASLSLGS VMD R D VK++ L RGSL++M G ARY W HGIA RK D+++G + RT R+S T R++
Sbjct: 56 KGYLLVTFATVEAAVAARSALQGTSPAVLGGRKLFVQFAAEAPPADAGSSGSSLSCPSTTAQVVVPGLSIIDDFISADEEASLLNTI---DGRAWEDSIQRRVQHYGYAFRYDTRDVDASAPLGPLPPFCAETAANM--HRLRPDLQLPDQITINEYLPGQGIAPHVDTADVFTEYIASLSLGSDIVMDFRLASDPSIVKHVVLKRGSLVLMVGEARYLWKHGIAYRKHDLINGSVAARTRRVSLTLRKI 300 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11866.1595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11866.1595.1 >prot_Ecto-sp13_S_contig11866.1595.1 ID=prot_Ecto-sp13_S_contig11866.1595.1|Name=mRNA_Ecto-sp13_S_contig11866.1595.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp MGRTVAVHFCSLVPPKPQEGLRCTSETAGVDVPGLTLIKGFVTEEEEGSLback to top mRNA from alignment at Ecto-sp13_S_contig11866:278..4691- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11866.1595.1 ID=mRNA_Ecto-sp13_S_contig11866.1595.1|Name=mRNA_Ecto-sp13_S_contig11866.1595.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4414bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11866:278..4691- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11866:278..4691- >mRNA_Ecto-sp13_S_contig11866.1595.1 ID=mRNA_Ecto-sp13_S_contig11866.1595.1|Name=mRNA_Ecto-sp13_S_contig11866.1595.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=735bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11866:278..4691- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |