mRNA_Ecto-sp13_S_contig11847.1585.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: D7FU60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU60_ECTSI) HSP 1 Score: 266 bits (679), Expect = 2.550e-80 Identity = 137/164 (83.54%), Postives = 142/164 (86.59%), Query Frame = 2
Query: 650 LRHALSATCFDAQVDTGSKRSSLWKRAQRALPSEMVMRRCQDVGGPVTLAQDSGDSKIYRQTPKALKSGAGFQQSRSHGRHFLVLVISAMVVGVAESKLVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARLSRAVTAWMDEKRQVHRI 1141
LR ++V TGSKRSSLWKRAQ ALPSEMVM QDVG P+TLAQ G SKIYRQTPKALK GAGFQQS SHGRHFLVLVISAMVVGVAESKLVEFQS FKCMWYDLPHPVQFA+LLM PALFFGINRIFGKLDKAA+ARLSRAVTAWMDEKRQVHRI
Sbjct: 58 LRSHADTAVHTSEVCTGSKRSSLWKRAQPALPSEMVMLGSQDVGRPLTLAQAPGHSKIYRQTPKALKRGAGFQQSGSHGRHFLVLVISAMVVGVAESKLVEFQSGFKCMWYDLPHPVQFAVLLMMPALFFGINRIFGKLDKAAYARLSRAVTAWMDEKRQVHRI 221
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: A0A6H5KYN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYN8_9PHAE) HSP 1 Score: 213 bits (543), Expect = 6.380e-62 Identity = 108/130 (83.08%), Postives = 114/130 (87.69%), Query Frame = 2
Query: 752 MVMRRCQDVGGPVTLAQDSGDSKIYRQTPKALKSGAGFQQSRSHGRHFLVLVISAMVVGVAESKLVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARLSRAVTAWMDEKRQVHRI 1141
MVM CQDVG TLAQ SG SK +RQTPKALK GAGFQQS SH RHFLVLV SAMVVGVAESKLVEF+S FKC+WYDLPHPVQFA+LLM PALFFGIN IFGKLDK A+ARLSRAVTAWMDEKRQ+HRI
Sbjct: 1 MVMLGCQDVGRSATLAQGSGYSKSFRQTPKALKRGAGFQQSGSHDRHFLVLVTSAMVVGVAESKLVEFRSGFKCIWYDLPHPVQFAVLLMMPALFFGINWIFGKLDKVAYARLSRAVTAWMDEKRQLHRI 130
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: D7G956_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G956_ECTSI) HSP 1 Score: 112 bits (280), Expect = 3.930e-26 Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 2
Query: 908 ISAMVVGVAESK-LVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARLSRAVTAWMDEKRQVHRI 1141
+S VVGVAES LV+ S FKCMWY+L HPVQFA+LL+ PALF G+NR+FG LDKAA+ARLSRAV+AWM+EKRQV +I
Sbjct: 1 MSVTVVGVAESNMLVDLPSGFKCMWYNLSHPVQFAVLLVMPALFLGVNRMFGMLDKAAYARLSRAVSAWMNEKRQVDQI 79
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: A0A6H5JLZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ1_9PHAE) HSP 1 Score: 103 bits (258), Expect = 8.140e-23 Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 2
Query: 890 HFLVL-VISAMVVGVAES-KLVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARLSRAVTAWMDEKRQVH 1135
H LV V+SA V + ES +LVEF S F+CMW DLPHP QFA++ + AL FG++RIFGKLD AA+ARLSRAVTAW++E+R H
Sbjct: 21 HLLVATVMSATTVKIVESNRLVEFPSVFRCMWNDLPHPAQFAIIFLMLALLFGVHRIFGKLDDAAYARLSRAVTAWINERRHAH 104
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: D7G968_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G968_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 3.510e-17 Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 2
Query: 833 TPKALKSGAGFQQSRSHGRHFLVLVISAMVVGVAES-KLVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARLSRAV 1102
T KA K G ++ RSH + +SAM+VG+ ES +LVEF S C W DLPHP QFA++ + AL FG+++IFGKLD AA+ARLSRAV
Sbjct: 7 TRKARKRRPGLRR-RSH--LLVATAMSAMIVGIVESNRLVEFPSGVMCTWNDLPHPAQFAVIFLMLALLFGVHQIFGKLDSAAYARLSRAV 94
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: D7G963_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G963_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 5.930e-15 Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 2
Query: 920 VVGVAESKLVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARL 1090
+V V ++L+EF S FKC WY LPHPVQF +L++ PAL +G+NR+F +L+KA+HARL
Sbjct: 1 MVLVENNRLLEFSSRFKCTWYGLPHPVQFMVLILMPALLYGVNRLFDRLEKASHARL 57
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: D7G973_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G973_ECTSI) HSP 1 Score: 79.7 bits (195), Expect = 1.250e-13 Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 2
Query: 887 RHFLVLVISAMVVGVAES-KLVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARLS-RAVTAWMDEK 1123
R L+ SA+ + + ES +L+EF S FKC WY LPHPVQF +L++ PAL +G+NR+F +L+KA+HA L A A ++EK
Sbjct: 25 RFALLFATSALNMVLLESNRLLEFPSGFKCTWYGLPHPVQFTILILMPALLYGVNRLFDRLEKASHAGLCPHATAACVEEK 105
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: A0A6H5JJ82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ82_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 2.410e-13 Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 2
Query: 884 GRHFLVLVISAMVVGVAESK-LVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARLSRAVTAWMDEKRQVH 1135
GR ++ +IS V V E K L+EF S F+CMW DLPH +QFA+LL+ + +G+NR+F K D+A + RL+ A ++E+R H
Sbjct: 56 GRRAMLALISVAHVDVVEGKWLIEFPSGFRCMWNDLPHGLQFAILLLMLGILYGVNRLFDKADEAIYTRLTCATAGLLNERRLHH 140
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: A0A6H5L6K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K1_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 6.930e-13 Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 2
Query: 884 GRHFLVLVISAMVVGVAESK-LVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARLSRAVTAWMDEKRQVH 1135
GR ++ ++SA+ V + E K L+EF F+C+W DLPH +QFA+L + + +G+NR+F K D+A H RL+ A ++E+R H
Sbjct: 58 GRRAILALVSAVHVDLVEGKWLIEFPPRFRCIWNDLPHGLQFAILFLMLGVLYGVNRLFDKADQAMHTRLTCATARLLNERRHHH 142
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Match: A0A6H5L9J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9J2_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 2.410e-12 Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 2
Query: 887 RHFLVLVISAMVVGVAE-SKLVEFQSEFKCMWYDLPHPVQFAMLLMTPALFFGINRIFGKLDKAAHARLSRAVTAWMDEKRQVHRI 1141
R L+ I+A+ G+ + S LV+ S FKC WY+L HP QFA+L + + + INR+F ++DK +ARLS A AWMDE R ++
Sbjct: 124 RRILLATIAALNAGLVDGSLLVDLPSGFKCAWYNLEHPAQFAILFLMVGVVYFINRLFNEVDKVMYARLSCATEAWMDEIRHSRQV 209 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11847.1585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11847.1585.1 >prot_Ecto-sp13_S_contig11847.1585.1 ID=prot_Ecto-sp13_S_contig11847.1585.1|Name=mRNA_Ecto-sp13_S_contig11847.1585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=131bp MVMRRCQDVGGPVTLAQDSGDSKIYRQTPKALKSGAGFQQSRSHGRHFLVback to top mRNA from alignment at Ecto-sp13_S_contig11847:2..3836+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11847.1585.1 ID=mRNA_Ecto-sp13_S_contig11847.1585.1|Name=mRNA_Ecto-sp13_S_contig11847.1585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3835bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11847:2..3836+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11847:2..3836+ >mRNA_Ecto-sp13_S_contig11847.1585.1 ID=mRNA_Ecto-sp13_S_contig11847.1585.1|Name=mRNA_Ecto-sp13_S_contig11847.1585.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=393bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11847:2..3836+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |