mRNA_Ecto-sp13_S_contig11827.1573.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: D7G419_ECTSI (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G419_ECTSI) HSP 1 Score: 378 bits (970), Expect = 1.040e-126 Identity = 166/169 (98.22%), Postives = 169/169 (100.00%), Query Frame = 1
Query: 1 QDFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEERGMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWHAEDDFMT 507
+DFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLA+ACDAKNNIMAMEERGMPV+IGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWHAEDDFMT
Sbjct: 299 KDFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLASACDAKNNIMAMEERGMPVIIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWHAEDDFMT 467
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: A0A836CHB0_9STRA (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB0_9STRA) HSP 1 Score: 275 bits (702), Expect = 1.550e-86 Identity = 121/169 (71.60%), Postives = 135/169 (79.88%), Query Frame = 1
Query: 1 QDFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEERGMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMG-GEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWHAEDDFM 504
++FYW+GY IVRE P WLFLMHD+F FDVN WGDFM NCP IGLDTHIY AW P PQA YL+ ACD KN ++AME++GMPVV+GE+SLATDNCAMWLNGF DNLPGFP+ C CPLPY G G PGAPVNPN PP GPFGTGSSTPS+G CPID WH E+ FM
Sbjct: 320 KEFYWEGYQIVRETVPQWLFLMHDAFMFDVNIWGDFMLNCPNIGLDTHIYHAWLDPMPQASYLSYACDVKNALVAMEKKGMPVVVGEYSLATDNCAMWLNGFNDNLPGFPRVQCTYTPCPLPYTGAGVIPGAPVNPNSPPQGPFGTGSSTPSYGMCPIDRRWHNENMFM 488
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: A0A7S1TUJ8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUJ8_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.550e-69 Identity = 96/162 (59.26%), Postives = 114/162 (70.37%), Query Frame = 1
Query: 1 QDFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEERGMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWH 486
QDFYW+GY+ VR AP W +LMHD+F W FM+ CP +G+DTHIYQAW+ PG + AC K+ I +M G PVV GEWSLATDNCA+WLNGFQDNLPGFP+ C+ V CP PYMG EQPGAP +PN P PFGTG STP +GQCP +W+
Sbjct: 38 QDFYWEGYNTVRAGAPDWKYLMHDAFRLHPWFWEGFMEGCPNVGIDTHIYQAWNNPGAPGEFYGGACGMKDAIASMGAVGWPVVTGEWSLATDNCALWLNGFQDNLPGFPKVFCKYVPCPEPYMGSEQPGAPPDPNAAPQDPFGTGGSTPYYGQCPTGQSWN 199
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: A0A1E7FG06_9STRA (Exo-1,3-beta-glucanase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FG06_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.060e-68 Identity = 99/173 (57.23%), Postives = 122/173 (70.52%), Query Frame = 1
Query: 7 FYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEERGMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWHAEDDFMTVGIRWL 525
FYW+GY IV+ AP+W ++MHDSF D N WG FM CP LDTHIYQAW P + G+ +AC K I+AME+ PV++GEWSLATDNCAMWLNGF DNLPGFP++ C+ + C PYMG EQPGAPV+P P GP+GTG S+PSFG CP+ W E + +T G W+
Sbjct: 311 FYWEGYLIVKRSAPYWKYVMHDSFRLDPNIWGGFMAGCPERALDTHIYQAWKDPDSRIGFFKDACSNKQAILAMEQAFGPVIVGEWSLATDNCAMWLNGFNDNLPGFPRSPCKYIPCSAPYMGDEQPGAPVDPTKPMRGPYGTGMSSPSFGMCPVGRDWIKEKNPLT-GRDWI 482
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: B8BUM3_THAPS (Cellulase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUM3_THAPS) HSP 1 Score: 223 bits (569), Expect = 6.760e-68 Identity = 97/164 (59.15%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 7 FYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEERGMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWHAEDD 498
FYWD Y IV+++APHW F+MHDSF F TWG FM+ CP LDTHIYQAW P P+ + NAC AK I ME PVV+GEWSLATDNCAMW+NGF DNLPGFP++ C+ + C YMG QPG PV+ P GP+GTG S PSFG CP+D W E D
Sbjct: 193 FYWDAYLIVKKEAPHWKFVMHDSFRFTPETWGGFMRGCPDRALDTHIYQAWQDPAPRLSFYNNACAAKKQIALMERAFGPVVVGEWSLATDNCAMWINGFNDNLPGFPRSPCKYIPCSTGYMGEGQPGVPVDIGKPLQGPYGTGMSGPSFGLCPVDRDWLTERD 356
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: A0A0M0J8Y9_9EUKA (Glucan-beta n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J8Y9_9EUKA) HSP 1 Score: 222 bits (566), Expect = 4.280e-67 Identity = 98/170 (57.65%), Postives = 120/170 (70.59%), Query Frame = 1
Query: 7 FYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEER-GMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAW-HAEDDFMTV 510
FYWDGYHIVRE AP W+F+MHDSF + W DFMK C LD HIYQAW+ PG + + NAC+ + N+ MEE+ MP+++GEWSLATDNCAMWLNGF DNLPG+P+ +CRM C PYMG EQPG P + MP GP+GTG S P FGQCP+ W +++MT
Sbjct: 287 FYWDGYHIVREGAPKWMFVMHDSFRGYPSAWWDFMKGCSHKVLDAHIYQAWNRPGLMSTFYKNACNFRGNVRQMEEQVDMPLIVGEWSLATDNCAMWLNGFNDNLPGYPKVSCRMFPCAAPYMGYEQPGTPPSNEMPLQGPYGTGVSGPQFGQCPVGVEWGDRNNEYMTT 456
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: A0A7S1ZG04_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZG04_9STRA) HSP 1 Score: 226 bits (575), Expect = 5.820e-67 Identity = 98/175 (56.00%), Postives = 119/175 (68.00%), Query Frame = 1
Query: 1 QDFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEERGMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWHAEDDFMTVGIRWL 525
+ +YW+GY IV++ AP+W ++MHDSF FDV WG FM CP LDTHIYQAW P + + NAC K+ I ME PV++GEWSLATDNCAMWLNGF DNL GFP+ C+ V+C PYMG EQPG PV+P P GP+GTG S PSFG CP+D W E + T G W+
Sbjct: 297 KQYYWEGYLIVKKDAPYWKYIMHDSFRFDVGIWGGFMAGCPDRALDTHIYQAWQDPASRISFYNNACAQKSAIAKMEAAFGPVIVGEWSLATDNCAMWLNGFNDNLSGFPRLPCKFVKCADPYMGTEQPGTPVDPGKPMQGPYGTGMSGPSFGLCPVDRDWMKERNIET-GTDWM 470
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: A0A7S1D7V4_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7V4_CYCTE) HSP 1 Score: 220 bits (560), Expect = 1.020e-66 Identity = 96/175 (54.86%), Postives = 115/175 (65.71%), Query Frame = 1
Query: 1 QDFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEERGMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWHAEDDFMTVGIRWL 525
+ FYWD Y IV+ APHW F +HDSF F WG FM CP +DTHIYQAW P +A + ANAC I AME+ PV++GEWSLATDNCAMWLNGF DNL G+P+ C+ + CP PYMG EQPG PVNP++P GP+GTG S P +G CPID W+ G W+
Sbjct: 51 KQFYWDSYLIVKTIAPHWKFAIHDSFRFAPYFWGGFMAGCPDRAIDTHIYQAWFNPASRAAFYANACSESAAITAMEQAFGPVIVGEWSLATDNCAMWLNGFNDNLNGYPKLPCKFIPCPGPYMGLEQPGTPVNPSLPLQGPYGTGVSGPIYGLCPIDRDWYKSSAQPASGPEWV 225
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: A0A8J6C6R7_DIALT (X8 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C6R7_DIALT) HSP 1 Score: 224 bits (570), Expect = 6.690e-66 Identity = 93/164 (56.71%), Postives = 114/164 (69.51%), Query Frame = 1
Query: 7 FYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEERGMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWHAEDD 498
FYW+GY I++ +AP W + MHDSF W FM+ CP + +DTHIYQAW+ PG + + AC+A++ I A E MPVV+GEWSLATDNCAMWLNGF DNLPG+P C +V C PYMG EQPGAP +P P GPFGTG S+PS+GQCP+ AW D
Sbjct: 342 FYWEGYKIIKRRAPGWKWFMHDSFRLSTGLWNGFMRGCPDVVMDTHIYQAWNWPGDASAFYKGACEARHTIAAYEANVMPVVVGEWSLATDNCAMWLNGFNDNLPGYPMVQCDLVPCAKPYMGAEQPGAPPDPTRGPRGPFGTGESSPSYGQCPVSRAWRDPSD 505
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Match: A0A7S3QGF9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QGF9_9STRA) HSP 1 Score: 223 bits (568), Expect = 8.730e-66 Identity = 95/160 (59.38%), Postives = 112/160 (70.00%), Query Frame = 1
Query: 7 FYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYQAWSPPGPQAGYLANACDAKNNIMAMEERGMPVVIGEWSLATDNCAMWLNGFQDNLPGFPQTTCRMVRCPLPYMGGEQPGAPVNPNMPPVGPFGTGSSTPSFGQCPIDAAWH 486
FYWDGY IV++QAP+W ++MHDSF F + WG FM CP LDTHIY AW P + + AC K+ I MEE PV++GEWSLATDNCAMWLNGF DNL GFP+ C+ +C PYMG +QPG PVNP P GPFGTG STP FG+CP+D WH
Sbjct: 294 FYWDGYLIVKKQAPYWRYVMHDSFRFHTDVWGGFMDGCPDRVLDTHIYTAWMDPTSRENFYDKACATKSKITRMEEAFGPVIVGEWSLATDNCAMWLNGFNDNLAGFPKLPCKYTKCTDPYMGTDQPGTPVNPGKPAQGPFGTGVSTPVFGECPVDRDWH 453 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11827.1573.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11827.1573.1 >prot_Ecto-sp13_S_contig11827.1573.1 ID=prot_Ecto-sp13_S_contig11827.1573.1|Name=mRNA_Ecto-sp13_S_contig11827.1573.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp QDFYWDGYHIVREQAPHWLFLMHDSFNFDVNTWGDFMKNCPTIGLDTHIYback to top mRNA from alignment at Ecto-sp13_S_contig11827:371..4652- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11827.1573.1 ID=mRNA_Ecto-sp13_S_contig11827.1573.1|Name=mRNA_Ecto-sp13_S_contig11827.1573.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4282bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11827:371..4652- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11827:371..4652- >mRNA_Ecto-sp13_S_contig11827.1573.1 ID=mRNA_Ecto-sp13_S_contig11827.1573.1|Name=mRNA_Ecto-sp13_S_contig11827.1573.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=528bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11827:371..4652- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |