mRNA_Ecto-sp13_S_contig1182.1571.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: D8LMR0_ECTSI (MOSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR0_ECTSI) HSP 1 Score: 449 bits (1156), Expect = 1.180e-157 Identity = 217/227 (95.59%), Postives = 221/227 (97.36%), Query Frame = 1
Query: 1 ASLEVPVVRTVGAGGPAAGGELVEVGIWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGTGFRAGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVRKEPKQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESAGVLRVGDDVDVLRAASKASAKKTQ 681
ASLEVPVVR VGAGGPAAGGELVEVG+WKD CQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGTGFR GFADGFP+LL AEESLEELNSRIAATGDGEQA VGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVRKEP+QTLDTFRTGSHVARWNEKWSKDVFFGMNVLHES GVLRVG+DVDVLRAASKASAKKTQ
Sbjct: 132 ASLEVPVVRKVGAGGPAAGGELVEVGVWKDTCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGTGFRTGFADGFPMLLVAEESLEELNSRIAATGDGEQAAVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVRKEPRQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESTGVLRVGNDVDVLRAASKASAKKTQ 358
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: A0A835Z5C1_9STRA (MOSC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5C1_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.220e-65 Identity = 108/200 (54.00%), Postives = 134/200 (67.00%), Query Frame = 1
Query: 55 GGELVEVGIWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGTGFRAGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQST-LEVRKEPKQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESA-GVLRVGDDVDVLR 648
G + V VG+W D C IDQG+ A+WL LG LRL+R D F R TDP YG GF ++DGFP+LLA+EESLE+LN+R+A +GM+RFRPN+VV G G +AED WTK+ VG + MR KPC RCQ+P I+QST + EP TL FRTG+H+ +EK + VFFG NVLHE G LRVGD V+VLR
Sbjct: 146 GAKEVPVGVWGDQCTGIDQGEETATWLSRCLGEPGLRLLRYDDAFTRGTDPAYGRGFFTAYSDGFPLLLASEESLEDLNARLAQP-------IGMERFRPNVVVEGMGAWAEDAWTKVAVGDVVMRVVKPCDRCQVPTIDQSTGTKTGAEPTATLRAFRTGAHLGMADEKVASAVFFGQNVLHEGGRGALRVGDRVEVLR 338
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: A0A7S2W2F0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2F0_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.320e-59 Identity = 94/196 (47.96%), Postives = 131/196 (66.84%), Query Frame = 1
Query: 67 VEVGIWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGTGFRAGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVRKEPKQTLDTFRTGSHVARWNEK--WSKDVFFGMNVLHESAGVLRVGDDVDVLR 648
V V +W + +DQGD AA WL +FL D LRLVR DG++R TDP + G+R ++DGFP+L+A+EESL ELN R+ + + + M+RFRPN+V++G GPF ED+WTKI G + M KPC+RC+IP +Q+T EV +EP TL FR G + EK W+ +VFFG N + S+GV+ VGD+V V++
Sbjct: 144 VRVTVWSTPYRGVDQGDVAAKWLSSFLQRDGLRLVRFPDGYIRETDPEFAKGYRTAYSDGFPLLVASEESLGELNRRMGKS----KPDIPMNRFRPNVVLKGGGPFCEDNWTKIHCGDLSMLIVKPCTRCKIPTTDQATAEVSEEPTATLKKFRAGKDLGPGFEKSSWADEVFFGQNAVTTSSGVIAVGDEVRVVK 335
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: A0A7S2UVY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY0_9STRA) HSP 1 Score: 188 bits (477), Expect = 8.550e-57 Identity = 95/186 (51.08%), Postives = 120/186 (64.52%), Query Frame = 1
Query: 79 IWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGTGFRAGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVR-KEPKQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESAGVLRVGDD 633
+W D + +DQG AA WL FLG +RL R + GFVRPTDP Y G++ GFADGFP L+A+E SL +LN R+ + V MDRFRPNIV+ G +AED W KI VG + MR KPCSRC+IP I QST +V KEP +T+ FR+G + E DVFFG N++HE G ++VGDD
Sbjct: 22 VWGDRVEGLDQGQEAADWLSQFLG-QRVRLARFRPGFVRPTDPDYAEGYQTGFADGFPFLVASEASLADLNQRLLPSAH----QVLMDRFRPNIVISGCEAWAEDTWEKILVGEVAMRAVKPCSRCKIPRIEQSTGKVDDKEPTETMKAFRSGEKLGL-PEALKNDVFFGQNLVHEHNGTVKVGDD 201
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: A0A3M1XET8_9CHLR (MOSC domain-containing protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A3M1XET8_9CHLR) HSP 1 Score: 174 bits (442), Expect = 1.440e-50 Identity = 95/210 (45.24%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 46 PAAGGELVEVGIWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGT--GFRAGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVRKEPKQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESAGVLRVGDDVDVLRAASKASA 669
P+ G+ V+V +W+D+C AIDQG+A A+WLQ FLG+ RLVR D VR D Y + GFADG+P LL ++ SL++LN+R+A+ V M+RFRPNIVV G FAED W ++R+G I KPC+RC IP I+Q T V +EP +TL T+RT + + V FG N++ + G+LRVGD+V + A+ ASA
Sbjct: 82 PSNTGQRVQVHVWRDVCDAIDQGEAVAAWLQDFLGMP-ARLVRTADDVVRRVDARYARRPSDQIGFADGYPFLLISQASLDDLNARLASP-------VPMNRFRPNIVVSGCDAFAEDHWRELRIGDIIFHVVKPCARCTIPTIDQDTAIVGREPLRTLSTYRT----------FGQKVLFGQNLVAANTGLLRVGDEVVITATATAASA 273
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: A0A6J4VB52_9CHLR (Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VB52_9CHLR) HSP 1 Score: 171 bits (433), Expect = 4.510e-49 Identity = 92/200 (46.00%), Postives = 120/200 (60.00%), Query Frame = 1
Query: 52 AGGELVEVGIWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGTGFR--AGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRG-WGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVRKEPKQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESAGVLRVGDDVDV 642
A G EV +W+D C+ +DQGD A W AFLGV RLVR+ D F R DP Y T R GFADGFP+LL +EESL +LN+R+A + M+RFRPN+VV G GPFAED W+++R+G + K C+RC I +Q T V KEP TL T+R G + V FG N++HE G +R+GD V++
Sbjct: 101 ASGPTREVIVWRDGCRVVDQGDEIARWFAAFLGVA-CRLVRLADDFERKVDPAYATSARDQVGFADGFPLLLISEESLADLNARLAEP-------LPMNRFRPNVVVAGAGGPFAEDGWSRVRIGGTILHVVKACARCAITTTDQRTAAVGKEPLTTLATYRRGE----------RGVLFGQNLIHEGPGTIRLGDRVEI 282
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: A0A0F7K1Z1_9GAMM (MOSC domain-containing protein n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A0F7K1Z1_9GAMM) HSP 1 Score: 165 bits (417), Expect = 6.540e-47 Identity = 88/197 (44.67%), Postives = 112/197 (56.85%), Query Frame = 1
Query: 58 GELVEVGIWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGTGF-RAGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVRKEPKQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESAGVLRVGDDVDVL 645
GE V +W D C A GDA A+WL FLGVD RL M + R DP Y T R GFADGFP +L ++ SL++LN R+ + M RFRPN+VV G P+AED W +IRVG I R KPCSRC IP I+ T E EP +TL +R + V+FG N+LH+ +G L++G V+VL
Sbjct: 87 GETASVQVWGDHCLARSAGDAPANWLSRFLGVD-CRLFFMPESTERAVDPDYATAHDRVGFADGFPFMLISQASLDDLNGRL-------DTPLPMQRFRPNLVVTGCEPYAEDSWRRIRVGEITFRVAKPCSRCAIPAIDPETAEKGAEPLRTLSRYR----------REGNQVYFGQNLLHDGSGELKIGAPVEVL 265
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: A0A7C1TDL4_9GAMM (MOSC domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1TDL4_9GAMM) HSP 1 Score: 163 bits (412), Expect = 3.290e-46 Identity = 89/192 (46.35%), Postives = 112/192 (58.33%), Query Frame = 1
Query: 73 VGIWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGT-GFRAGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVRKEPKQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESAGVLRVGDDVDVL 645
V +W+D C A+D GD A +WL FLG+ RLV D VR DP Y G R F+DGFPILL ++ SL++LN R+A V M RFRPN+VV G PFAED+W +IR+G I R KPCSRC IP I+ +T E EP +TL FR K +FFG NV+ ES G L G V+++
Sbjct: 88 VTVWEDRCTALDCGDEAGAWLSQFLGI-TCRLVFFPDDEVRQVDPAYAQPGDRTAFSDGFPILLISQASLDDLNRRLAKP-------VAMRRFRPNLVVSGCAPFAEDNWKQIRIGGILFRIVKPCSRCVIPNIDPATAEKSAEPTRTLSRFRLRE----------KKIFFGQNVIAESQGELECGMPVEII 261
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: A0A558DFU9_9GAMM (MOSC domain-containing protein n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A558DFU9_9GAMM) HSP 1 Score: 162 bits (410), Expect = 7.340e-46 Identity = 91/196 (46.43%), Postives = 113/196 (57.65%), Query Frame = 1
Query: 61 ELVEVGIWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYG-TGFRAGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEVRKEPKQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESAGVLRVGDDVDVL 645
E V +W D C A G AAA WL FLG+ N RL M + RP DPGY T + GFADGFP LL +E SL +LN R+ + + M RFRPN+VV G P+AED W +IR+G I R KPCSRC IP IN T E EP +TL+++R + V+FG N+LH+ G LRVG V+VL
Sbjct: 88 EQQTVQVWGDHCLAESAGVAAAEWLSHFLGL-NCRLFFMPESTRRPVDPGYAETDDQVGFADGFPFLLISEASLADLNGRL-------EQPLPMLRFRPNLVVSGCEPYAEDSWRRIRIGDITFRVAKPCSRCVIPTINPETAEKSVEPLRTLNSYR----------REGNKVYFGQNLLHDGVGELRVGTTVEVL 265
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Match: A0A7C1U443_9GAMM (MOSC domain-containing protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C1U443_9GAMM) HSP 1 Score: 161 bits (408), Expect = 1.460e-45 Identity = 89/202 (44.06%), Postives = 119/202 (58.91%), Query Frame = 1
Query: 49 AAGGELVEVGIWKDMCQAIDQGDAAASWLQAFLGVDNLRLVRMKDGFVRPTDPGYGT-GFRAGFADGFPILLAAEESLEELNSRIAATGDGEQATVGMDRFRPNIVVRGWGPFAEDDWTKIRVGRIGMRTPKPCSRCQIPGINQSTLEV--RKEPKQTLDTFRTGSHVARWNEKWSKDVFFGMNVLHESAGVLRVGDDVDVL 645
AAGGE +EV IW+D C A+ G+ A +W +LG+ +RLVRM D VRP DP YG G FADG+P+LL + SL++LN+R+ + V M RFRPN+VV G P+AED+W +IRVG + KPCSRC ++ T E R+EP TL +R+ VF G N++ S GV+ VGD V+VL
Sbjct: 80 AAGGERLEVDIWRDRCPAVAVGEEADAWFSRYLGMP-VRLVRMTDDIVRPVDPAYGRPGDEVSFADGYPVLLIGQASLDDLNTRL-------KKPVDMRRFRPNLVVTGAEPYAEDNWRRIRVGEVEFEGVKPCSRCIFTTVDPDTGEPDPRREPLATLGRYRSREG----------GVFLGRNLVPRSGGVIHVGDPVEVL 263 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1182.1571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1182.1571.1 >prot_Ecto-sp13_S_contig1182.1571.1 ID=prot_Ecto-sp13_S_contig1182.1571.1|Name=mRNA_Ecto-sp13_S_contig1182.1571.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=228bp ASLEVPVVRTVGAGGPAAGGELVEVGIWKDMCQAIDQGDAAASWLQAFLGback to top mRNA from alignment at Ecto-sp13_S_contig1182:15864..18574- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1182.1571.1 ID=mRNA_Ecto-sp13_S_contig1182.1571.1|Name=mRNA_Ecto-sp13_S_contig1182.1571.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2711bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1182:15864..18574- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1182:15864..18574- >mRNA_Ecto-sp13_S_contig1182.1571.1 ID=mRNA_Ecto-sp13_S_contig1182.1571.1|Name=mRNA_Ecto-sp13_S_contig1182.1571.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=684bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1182:15864..18574- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |