mRNA_Ecto-sp13_S_contig1182.1570.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: D8LMR1_ECTSI (Ubiquinone biosynthesis O-methyltransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR1_ECTSI) HSP 1 Score: 605 bits (1560), Expect = 5.010e-218 Identity = 304/325 (93.54%), Postives = 315/325 (96.92%), Query Frame = 1
Query: 1 MHRLLWRCSCPRKLRPWAALQQTRHAPRFPHSNSSPSAHSTQAGEGLAQDKTGTGQEGTQGIRESRHSRANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGGEKG 975
MHRLLWRCSCPRKLRPWAALQQTRH P FP+S PSAHSTQAGEG+A+DK GTGQEGT+GIRESRHSRAN+SE+ELEKFRHL+KEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPH GSATPLAGLRALDVGCGGGLLSESLARLGAEV+GVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLV SLEVIEHVEDPAGFVSSLASLTRPGGMLA+STINRTAKSFALAIVGAEYLAG+VPVGTHDWR+FVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGG G
Sbjct: 1 MHRLLWRCSCPRKLRPWAALQQTRHTPSFPYST--PSAHSTQAGEGVAEDKAGTGQEGTEGIRESRHSRANISEEELEKFRHLEKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHWGSATPLAGLRALDVGCGGGLLSESLARLGAEVVGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVTSLEVIEHVEDPAGFVSSLASLTRPGGMLAMSTINRTAKSFALAIVGAEYLAGIVPVGTHDWRKFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGGGTG 323
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A1V0GSV7_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=6 Tax=Paracoccus TaxID=265 RepID=A0A1V0GSV7_9RHOB) HSP 1 Score: 237 bits (605), Expect = 5.250e-74 Identity = 122/254 (48.03%), Postives = 167/254 (65.75%), Query Frame = 1
Query: 196 RHSRANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
R +++ E+ KF+ + EWW+P + PLH +N TR+ Y+ QV + R + P AGL LD+GCGGGL++E +ARLGA V G D +P N+AVAS HAQG L I Y ATT+E L G ++D+V +LE++EHV DPA FV++ L RPGGML ST+NRTAKSF AI+GAE++ +P GTHDWRRF+ P++LA M +A G +V+ CG+++NP+ W +P DL VNY +TALR
Sbjct: 4 RQHTSSIDPAEVAKFQAMAAEWWDPQGK--FKPLHMLNPTRLDYVTAQVAAQFGR---DRDADQPFAGLSVLDIGCGGGLMAEPMARLGATVTGADAAPGNIAVASLHAQGQGLP--IDYRATTSEALSAEGLRYDVVMALEIVEHVADPAAFVATCRDLLRPGGMLIQSTLNRTAKSFGAAIIGAEWIMRWLPKGTHDWRRFITPDELATMTEAAGL--RVVDRCGMVFNPLGWSWSLSPRDLSVNYAMTALR 248
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A344PGN4_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus suum TaxID=2259340 RepID=A0A344PGN4_9RHOB) HSP 1 Score: 234 bits (597), Expect = 7.430e-73 Identity = 126/250 (50.40%), Postives = 162/250 (64.80%), Query Frame = 1
Query: 208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
++V + EL+KF + EWW+PA + PLH MN R+ Y+ Q+ + R A P AGLR LD+GCGGGLLSE LARLGAEV+G D N+ VA HA L I Y ATTAE L GE FD V +LE+IEHVE PA FV++ ASL RPGG + +ST+NRT +SFA+AIVGAE++ +P GTHDWRRF+ P +L M+ A G + V+ G+ YNP++G W+ + D NYI TALR
Sbjct: 3 SSVDQAELDKFEAMAAEWWDPAGK--FKPLHGMNPVRLDYVTDQIAQA---CGRERKGARPFAGLRVLDIGCGGGLLSEPLARLGAEVLGADAVARNIEVARLHAAQMGLE--IDYRATTAEALAAAGEAFDAVLALEIIEHVEGPAEFVATCASLARPGGAVIVSTLNRTPQSFAMAIVGAEWVMRWLPKGTHDWRRFITPAELETMMSAAGL--QPVDQRGMQYNPLTGDWRLSSSDFGCNYIATALR 243
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A1M7EQ93_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=3 Tax=Paracoccus TaxID=265 RepID=A0A1M7EQ93_9RHOB) HSP 1 Score: 232 bits (592), Expect = 4.360e-72 Identity = 120/250 (48.00%), Postives = 169/250 (67.60%), Query Frame = 1
Query: 208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
+++ E+ KF+ + EWW+PA + PLH +N R++YIV Q+ + E + R S PL GLR LD+GCGGGL+SE +ARLGA+V G D + EN+ +A HA+ L I Y ATTAE L G +D+V +LE++EHV DPA F+++ A L RPGG+L ST+NRT +SFA AIVGAE++ +P GTHDWRRF+ P++LAAM A G P +V+ G+++NP+ W +P DL VNY++T +R
Sbjct: 6 SSIDRAEVAKFQAMAAEWWDPAGK--FKPLHMLNPLRLEYIVTQIAA---EFARDRSSLRPLDGLRLLDIGCGGGLVSEPMARLGAQVTGADAAAENIEIARLHAEQSGLQ--IDYRATTAESLLAEGGGYDVVLALEIVEHVADPADFIATCARLLRPGGVLIASTVNRTPQSFAAAIVGAEWIMRWLPRGTHDWRRFIRPDELAAMFDAAGAP--VVDRAGMVFNPLGWSWSLSPRDLAVNYLMTGIR 246
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A1W6CWW7_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus contaminans TaxID=1945662 RepID=A0A1W6CWW7_9RHOB) HSP 1 Score: 232 bits (591), Expect = 7.970e-72 Identity = 123/254 (48.43%), Postives = 172/254 (67.72%), Query Frame = 1
Query: 205 RANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGG 966
R+++ + E+ KF+ + EWW+PA + PLH +N R+ YI Q+ + E R S P GLR LD+GCGGGL++E +ARLGA V G D + N+AVA HA L I Y ATTAE L GE+FD+V +LE++EHV DPA F+++ A L RPGG+L ST+NRT +SFA AI+GAE++ +P GTHDWRRF+ P++LAAMLQA G +V++ G+++NP++ W + DL VNY++TA+RG G
Sbjct: 6 RSSIDDAEVAKFQAMAAEWWDPAGK--FRPLHMLNPVRLDYIAAQIAA---EFGRDRRSLRPFEGLRLLDIGCGGGLVAEPMARLGAGVTGADAAEGNIAVARIHAAQSGLD--IDYRATTAEALLAGGERFDVVLALEIVEHVADPADFIATCARLLRPGGLLVASTLNRTPQSFAAAILGAEWVMRWLPRGTHDWRRFIRPDELAAMLQAAGLG--VVDSAGMVFNPLAWGWSLSARDLSVNYLMTAVRGPG 250
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A2H5EZH1_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus zhejiangensis TaxID=1077935 RepID=A0A2H5EZH1_9RHOB) HSP 1 Score: 231 bits (589), Expect = 1.650e-71 Identity = 120/250 (48.00%), Postives = 166/250 (66.40%), Query Frame = 1
Query: 208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
++V EL KF + EWW+P + PLH +N TR+ YI+ ++G+ E S P GLR LD+GCGGGLL+E +ARLGAEV+G D N++VAS HA+ L I Y ATTAE L + GE+FD V +LE++EHV DPA FV++ A+LT+PGG++ +ST+NRT KSF AI+GAE++ +P GTH+W RF+ PE+LA M+ A G P V+ G+++NP+ W + DL VNYI+T R
Sbjct: 16 SSVDPAELAKFEAMAAEWWDPNGK--FKPLHMLNPTRLDYIISRIGA---EFGRDARSLRPFEGLRLLDIGCGGGLLTEPMARLGAEVVGADAVERNISVASLHAEQQGLE--IDYRATTAEALADAGERFDAVLALEIVEHVADPAAFVATCAALTKPGGVMIVSTLNRTPKSFGAAIIGAEWIMRWLPKGTHEWHRFITPEELAGMMAAAGMPA--VDRRGMVFNPIRWDWSLSERDLSVNYIMTGRR 256
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A4R6A7K2_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Palleronia sediminis TaxID=2547833 RepID=A0A4R6A7K2_9RHOB) HSP 1 Score: 229 bits (585), Expect = 4.650e-71 Identity = 125/254 (49.21%), Postives = 163/254 (64.17%), Query Frame = 1
Query: 208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATP--LAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGG 963
A V E+EKF + EWW+P + PLH +N R+ YI RQ+ E R ATP GLR LD+GCGGGLL+E +ARLGAEV+G D + N+ VA HA+ L I Y TTAE L GE FD+V ++EV+EHV DP ++++ L RPGGM+ ST+NRTAKSFAL IVGAEY+ +P GTHDW RF+ P++L AML+ G + V+ G+++NPVS RW + DL VNY+ T+LR G
Sbjct: 3 ATVDPGEIEKFSAMAAEWWDPQGK--FKPLHMLNPCRLDYITRQI-----EGHFGRDLATPRPFDGLRLLDIGCGGGLLAEPMARLGAEVVGADAAERNIPVARIHAEEQGLE--IDYRHTTAEALAEAGETFDVVLNMEVVEHVSDPKAYLAACHDLVRPGGMMVCSTLNRTAKSFALGIVGAEYVMRWLPRGTHDWNRFITPDELCAMLREAGL--DPVDRTGMVFNPVSWRWSLSERDLSVNYVTTSLRAG 245
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A553AYA2_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus sp. M683 TaxID=2594268 RepID=A0A553AYA2_9RHOB) HSP 1 Score: 228 bits (582), Expect = 1.760e-70 Identity = 122/253 (48.22%), Postives = 164/253 (64.82%), Query Frame = 1
Query: 208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGG 966
++V EL KF + EWW+P + PLH +N TR+ Y+V ++ + P + P GLR LD+GCGGGLLSE +ARLGA+++G D N+AVAS HA+ L I Y ATTAE L GEQFD V +LE++EHV DPA FV++ A+L RP G L IST+NRT KSFA AI+GAE++ +P GTH+W RF+ PE+LAAM+ A G P ++ G+++NP+ W + DL VNYI+T R G
Sbjct: 11 SSVDAAELAKFEAMAAEWWDPNGK--FKPLHMLNPTRLDYVVSRIAAQFGR-DPR--APRPFEGLRLLDIGCGGGLLSEPMARLGADIVGADAVERNIAVASLHAEQQGLK--IDYRATTAEALAEAGEQFDAVLALEIVEHVADPAAFVATCAALARPEGALIISTLNRTPKSFAAAIIGAEWIMRWLPKGTHEWHRFITPEELAAMMSAAGMPA--LDRRGMVFNPIRWDWSLSDRDLSVNYIMTGARQAG 254
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: UPI001CA49C44 (bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG n=1 Tax=Paracoccus bogoriensis TaxID=242065 RepID=UPI001CA49C44) HSP 1 Score: 228 bits (581), Expect = 1.930e-70 Identity = 117/250 (46.80%), Postives = 170/250 (68.00%), Query Frame = 1
Query: 208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
A+V + E+ KF + EWW+P + PLH MN R+ YI Q+ + R PLAGLR LD+GCGGGL++E +ARLGA+V G D + N+AVA HA+ + I Y ATTAE L + GE+FD+V +LE+IEHV +PAGFV++ SL +PGG+L +ST+NRTA+SFA AI+GAE++ +P GTHDWRRF+ P++LA +++ G ++ + G+++NP++ W+ + DL VNY++TA R
Sbjct: 6 ASVDQAEIAKFEAMAAEWWDPNGK--FRPLHLMNPLRLDYIAAQITAEFGRDGKAR---MPLAGLRLLDIGCGGGLVAEPMARLGADVTGADAAAGNIAVARLHAEAQGIA--IDYRATTAEALADMGERFDVVLALEIIEHVSNPAGFVATCQSLLKPGGLLILSTLNRTARSFAAAIIGAEWVMRWLPRGTHDWRRFITPDELAGLVKGAGL--QVADRRGMVFNPLTFGWRLSDRDLSVNYLLTARR 246
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A238VWR5_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus sediminis TaxID=1214787 RepID=A0A238VWR5_9RHOB) HSP 1 Score: 228 bits (581), Expect = 2.050e-70 Identity = 119/251 (47.41%), Postives = 162/251 (64.54%), Query Frame = 1
Query: 211 NVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGG 963
++ E+ KF + EWW+P + PLH MN R+ YI QV + E R P GLR LD+GCGGGL++E +ARLGAEVMG D + N+AVA HA L I Y ATTAE L G++FD+V +LE++EHV DPA FV++ L RPGG++ +ST+NRTAKSF AI+GAE++ +P GTHDW RF+ P++LA M A G E+ + G+++NP++ W + DL VNY++TA RGG
Sbjct: 7 SIDPAEIAKFESMAAEWWDPRGK--FRPLHLMNPVRLDYIATQVAA---EFGRDRRDLRPFGGLRVLDIGCGGGLVAEPMARLGAEVMGADAAEGNIAVARVHAAQQGLA--IDYRATTAESLAAEGQRFDVVLALEIVEHVADPAAFVATCGDLVRPGGLVILSTLNRTAKSFGAAIIGAEWIMRWLPRGTHDWNRFITPDELAGMAIAAGL--EVEDRSGMVFNPLTFGWSLSDRDLSVNYVLTARRGG 248 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1182.1570.1 >prot_Ecto-sp13_S_contig1182.1570.1 ID=prot_Ecto-sp13_S_contig1182.1570.1|Name=mRNA_Ecto-sp13_S_contig1182.1570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=326bp MHRLLWRCSCPRKLRPWAALQQTRHAPRFPHSNSSPSAHSTQAGEGLAQDback to top mRNA from alignment at Ecto-sp13_S_contig1182:9913..14322+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1182.1570.1 ID=mRNA_Ecto-sp13_S_contig1182.1570.1|Name=mRNA_Ecto-sp13_S_contig1182.1570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1182:9913..14322+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1182:9913..14322+ >mRNA_Ecto-sp13_S_contig1182.1570.1 ID=mRNA_Ecto-sp13_S_contig1182.1570.1|Name=mRNA_Ecto-sp13_S_contig1182.1570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=978bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1182:9913..14322+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |