mRNA_Ecto-sp13_S_contig1182.1570.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1182.1570.1
Unique NamemRNA_Ecto-sp13_S_contig1182.1570.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: D8LMR1_ECTSI (Ubiquinone biosynthesis O-methyltransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR1_ECTSI)

HSP 1 Score: 605 bits (1560), Expect = 5.010e-218
Identity = 304/325 (93.54%), Postives = 315/325 (96.92%), Query Frame = 1
Query:    1 MHRLLWRCSCPRKLRPWAALQQTRHAPRFPHSNSSPSAHSTQAGEGLAQDKTGTGQEGTQGIRESRHSRANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGGEKG 975
            MHRLLWRCSCPRKLRPWAALQQTRH P FP+S   PSAHSTQAGEG+A+DK GTGQEGT+GIRESRHSRAN+SE+ELEKFRHL+KEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPH GSATPLAGLRALDVGCGGGLLSESLARLGAEV+GVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLV SLEVIEHVEDPAGFVSSLASLTRPGGMLA+STINRTAKSFALAIVGAEYLAG+VPVGTHDWR+FVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGG  G
Sbjct:    1 MHRLLWRCSCPRKLRPWAALQQTRHTPSFPYST--PSAHSTQAGEGVAEDKAGTGQEGTEGIRESRHSRANISEEELEKFRHLEKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHWGSATPLAGLRALDVGCGGGLLSESLARLGAEVVGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVTSLEVIEHVEDPAGFVSSLASLTRPGGMLAMSTINRTAKSFALAIVGAEYLAGIVPVGTHDWRKFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGGGTG 323          
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A1V0GSV7_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=6 Tax=Paracoccus TaxID=265 RepID=A0A1V0GSV7_9RHOB)

HSP 1 Score: 237 bits (605), Expect = 5.250e-74
Identity = 122/254 (48.03%), Postives = 167/254 (65.75%), Query Frame = 1
Query:  196 RHSRANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
            R   +++   E+ KF+ +  EWW+P  +    PLH +N TR+ Y+  QV +        R +  P AGL  LD+GCGGGL++E +ARLGA V G D +P N+AVAS HAQG  L   I Y ATT+E L   G ++D+V +LE++EHV DPA FV++   L RPGGML  ST+NRTAKSF  AI+GAE++   +P GTHDWRRF+ P++LA M +A G    +V+ CG+++NP+   W  +P DL VNY +TALR
Sbjct:    4 RQHTSSIDPAEVAKFQAMAAEWWDPQGK--FKPLHMLNPTRLDYVTAQVAAQFGR---DRDADQPFAGLSVLDIGCGGGLMAEPMARLGATVTGADAAPGNIAVASLHAQGQGLP--IDYRATTSEALSAEGLRYDVVMALEIVEHVADPAAFVATCRDLLRPGGMLIQSTLNRTAKSFGAAIIGAEWIMRWLPKGTHDWRRFITPDELATMTEAAGL--RVVDRCGMVFNPLGWSWSLSPRDLSVNYAMTALR 248          
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A344PGN4_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus suum TaxID=2259340 RepID=A0A344PGN4_9RHOB)

HSP 1 Score: 234 bits (597), Expect = 7.430e-73
Identity = 126/250 (50.40%), Postives = 162/250 (64.80%), Query Frame = 1
Query:  208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
            ++V + EL+KF  +  EWW+PA +    PLH MN  R+ Y+  Q+  +       R  A P AGLR LD+GCGGGLLSE LARLGAEV+G D    N+ VA  HA    L   I Y ATTAE L   GE FD V +LE+IEHVE PA FV++ ASL RPGG + +ST+NRT +SFA+AIVGAE++   +P GTHDWRRF+ P +L  M+ A G   + V+  G+ YNP++G W+ +  D   NYI TALR
Sbjct:    3 SSVDQAELDKFEAMAAEWWDPAGK--FKPLHGMNPVRLDYVTDQIAQA---CGRERKGARPFAGLRVLDIGCGGGLLSEPLARLGAEVLGADAVARNIEVARLHAAQMGLE--IDYRATTAEALAAAGEAFDAVLALEIIEHVEGPAEFVATCASLARPGGAVIVSTLNRTPQSFAMAIVGAEWVMRWLPKGTHDWRRFITPAELETMMSAAGL--QPVDQRGMQYNPLTGDWRLSSSDFGCNYIATALR 243          
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A1M7EQ93_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=3 Tax=Paracoccus TaxID=265 RepID=A0A1M7EQ93_9RHOB)

HSP 1 Score: 232 bits (592), Expect = 4.360e-72
Identity = 120/250 (48.00%), Postives = 169/250 (67.60%), Query Frame = 1
Query:  208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
            +++   E+ KF+ +  EWW+PA +    PLH +N  R++YIV Q+ +   E +  R S  PL GLR LD+GCGGGL+SE +ARLGA+V G D + EN+ +A  HA+   L   I Y ATTAE L   G  +D+V +LE++EHV DPA F+++ A L RPGG+L  ST+NRT +SFA AIVGAE++   +P GTHDWRRF+ P++LAAM  A G P  +V+  G+++NP+   W  +P DL VNY++T +R
Sbjct:    6 SSIDRAEVAKFQAMAAEWWDPAGK--FKPLHMLNPLRLEYIVTQIAA---EFARDRSSLRPLDGLRLLDIGCGGGLVSEPMARLGAQVTGADAAAENIEIARLHAEQSGLQ--IDYRATTAESLLAEGGGYDVVLALEIVEHVADPADFIATCARLLRPGGVLIASTVNRTPQSFAAAIVGAEWIMRWLPRGTHDWRRFIRPDELAAMFDAAGAP--VVDRAGMVFNPLGWSWSLSPRDLAVNYLMTGIR 246          
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A1W6CWW7_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus contaminans TaxID=1945662 RepID=A0A1W6CWW7_9RHOB)

HSP 1 Score: 232 bits (591), Expect = 7.970e-72
Identity = 123/254 (48.43%), Postives = 172/254 (67.72%), Query Frame = 1
Query:  205 RANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGG 966
            R+++ + E+ KF+ +  EWW+PA +    PLH +N  R+ YI  Q+ +   E    R S  P  GLR LD+GCGGGL++E +ARLGA V G D +  N+AVA  HA    L   I Y ATTAE L   GE+FD+V +LE++EHV DPA F+++ A L RPGG+L  ST+NRT +SFA AI+GAE++   +P GTHDWRRF+ P++LAAMLQA G    +V++ G+++NP++  W  +  DL VNY++TA+RG G
Sbjct:    6 RSSIDDAEVAKFQAMAAEWWDPAGK--FRPLHMLNPVRLDYIAAQIAA---EFGRDRRSLRPFEGLRLLDIGCGGGLVAEPMARLGAGVTGADAAEGNIAVARIHAAQSGLD--IDYRATTAEALLAGGERFDVVLALEIVEHVADPADFIATCARLLRPGGLLVASTLNRTPQSFAAAILGAEWVMRWLPRGTHDWRRFIRPDELAAMLQAAGLG--VVDSAGMVFNPLAWGWSLSARDLSVNYLMTAVRGPG 250          
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A2H5EZH1_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus zhejiangensis TaxID=1077935 RepID=A0A2H5EZH1_9RHOB)

HSP 1 Score: 231 bits (589), Expect = 1.650e-71
Identity = 120/250 (48.00%), Postives = 166/250 (66.40%), Query Frame = 1
Query:  208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
            ++V   EL KF  +  EWW+P  +    PLH +N TR+ YI+ ++G+   E      S  P  GLR LD+GCGGGLL+E +ARLGAEV+G D    N++VAS HA+   L   I Y ATTAE L + GE+FD V +LE++EHV DPA FV++ A+LT+PGG++ +ST+NRT KSF  AI+GAE++   +P GTH+W RF+ PE+LA M+ A G P   V+  G+++NP+   W  +  DL VNYI+T  R
Sbjct:   16 SSVDPAELAKFEAMAAEWWDPNGK--FKPLHMLNPTRLDYIISRIGA---EFGRDARSLRPFEGLRLLDIGCGGGLLTEPMARLGAEVVGADAVERNISVASLHAEQQGLE--IDYRATTAEALADAGERFDAVLALEIVEHVADPAAFVATCAALTKPGGVMIVSTLNRTPKSFGAAIIGAEWIMRWLPKGTHEWHRFITPEELAGMMAAAGMPA--VDRRGMVFNPIRWDWSLSERDLSVNYIMTGRR 256          
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A4R6A7K2_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Palleronia sediminis TaxID=2547833 RepID=A0A4R6A7K2_9RHOB)

HSP 1 Score: 229 bits (585), Expect = 4.650e-71
Identity = 125/254 (49.21%), Postives = 163/254 (64.17%), Query Frame = 1
Query:  208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATP--LAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGG 963
            A V   E+EKF  +  EWW+P  +    PLH +N  R+ YI RQ+     E    R  ATP    GLR LD+GCGGGLL+E +ARLGAEV+G D +  N+ VA  HA+   L   I Y  TTAE L   GE FD+V ++EV+EHV DP  ++++   L RPGGM+  ST+NRTAKSFAL IVGAEY+   +P GTHDW RF+ P++L AML+  G   + V+  G+++NPVS RW  +  DL VNY+ T+LR G
Sbjct:    3 ATVDPGEIEKFSAMAAEWWDPQGK--FKPLHMLNPCRLDYITRQI-----EGHFGRDLATPRPFDGLRLLDIGCGGGLLAEPMARLGAEVVGADAAERNIPVARIHAEEQGLE--IDYRHTTAEALAEAGETFDVVLNMEVVEHVSDPKAYLAACHDLVRPGGMMVCSTLNRTAKSFALGIVGAEYVMRWLPRGTHDWNRFITPDELCAMLREAGL--DPVDRTGMVFNPVSWRWSLSERDLSVNYVTTSLRAG 245          
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A553AYA2_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus sp. M683 TaxID=2594268 RepID=A0A553AYA2_9RHOB)

HSP 1 Score: 228 bits (582), Expect = 1.760e-70
Identity = 122/253 (48.22%), Postives = 164/253 (64.82%), Query Frame = 1
Query:  208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGGG 966
            ++V   EL KF  +  EWW+P  +    PLH +N TR+ Y+V ++ +      P   +  P  GLR LD+GCGGGLLSE +ARLGA+++G D    N+AVAS HA+   L   I Y ATTAE L   GEQFD V +LE++EHV DPA FV++ A+L RP G L IST+NRT KSFA AI+GAE++   +P GTH+W RF+ PE+LAAM+ A G P   ++  G+++NP+   W  +  DL VNYI+T  R  G
Sbjct:   11 SSVDAAELAKFEAMAAEWWDPNGK--FKPLHMLNPTRLDYVVSRIAAQFGR-DPR--APRPFEGLRLLDIGCGGGLLSEPMARLGADIVGADAVERNIAVASLHAEQQGLK--IDYRATTAEALAEAGEQFDAVLALEIVEHVADPAAFVATCAALARPEGALIISTLNRTPKSFAAAIIGAEWIMRWLPKGTHEWHRFITPEELAAMMSAAGMPA--LDRRGMVFNPIRWDWSLSDRDLSVNYIMTGARQAG 254          
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: UPI001CA49C44 (bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG n=1 Tax=Paracoccus bogoriensis TaxID=242065 RepID=UPI001CA49C44)

HSP 1 Score: 228 bits (581), Expect = 1.930e-70
Identity = 117/250 (46.80%), Postives = 170/250 (68.00%), Query Frame = 1
Query:  208 ANVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALR 957
            A+V + E+ KF  +  EWW+P  +    PLH MN  R+ YI  Q+ +        R    PLAGLR LD+GCGGGL++E +ARLGA+V G D +  N+AVA  HA+   +   I Y ATTAE L + GE+FD+V +LE+IEHV +PAGFV++  SL +PGG+L +ST+NRTA+SFA AI+GAE++   +P GTHDWRRF+ P++LA +++  G   ++ +  G+++NP++  W+ +  DL VNY++TA R
Sbjct:    6 ASVDQAEIAKFEAMAAEWWDPNGK--FRPLHLMNPLRLDYIAAQITAEFGRDGKAR---MPLAGLRLLDIGCGGGLVAEPMARLGADVTGADAAAGNIAVARLHAEAQGIA--IDYRATTAEALADMGERFDVVLALEIIEHVSNPAGFVATCQSLLKPGGLLILSTLNRTARSFAAAIIGAEWVMRWLPRGTHDWRRFITPDELAGLVKGAGL--QVADRRGMVFNPLTFGWRLSDRDLSVNYLLTARR 246          
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Match: A0A238VWR5_9RHOB (Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Paracoccus sediminis TaxID=1214787 RepID=A0A238VWR5_9RHOB)

HSP 1 Score: 228 bits (581), Expect = 2.050e-70
Identity = 119/251 (47.41%), Postives = 162/251 (64.54%), Query Frame = 1
Query:  211 NVSEDELEKFRHLQKEWWNPASRQGAGPLHSMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESLARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQFDLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVGAEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSGRWKENPGDLDVNYIVTALRGG 963
            ++   E+ KF  +  EWW+P  +    PLH MN  R+ YI  QV +   E    R    P  GLR LD+GCGGGL++E +ARLGAEVMG D +  N+AVA  HA    L   I Y ATTAE L   G++FD+V +LE++EHV DPA FV++   L RPGG++ +ST+NRTAKSF  AI+GAE++   +P GTHDW RF+ P++LA M  A G   E+ +  G+++NP++  W  +  DL VNY++TA RGG
Sbjct:    7 SIDPAEIAKFESMAAEWWDPRGK--FRPLHLMNPVRLDYIATQVAA---EFGRDRRDLRPFGGLRVLDIGCGGGLVAEPMARLGAEVMGADAAEGNIAVARVHAAQQGLA--IDYRATTAESLAAEGQRFDVVLALEIVEHVADPAAFVATCGDLVRPGGLVILSTLNRTAKSFGAAIIGAEWIMRWLPRGTHDWNRFITPDELAGMAIAAGL--EVEDRSGMVFNPLTFGWSLSDRDLSVNYVLTARRGG 248          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1182.1570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMR1_ECTSI5.010e-21893.54Ubiquinone biosynthesis O-methyltransferase, mitoc... [more]
A0A1V0GSV7_9RHOB5.250e-7448.03Ubiquinone biosynthesis O-methyltransferase n=6 Ta... [more]
A0A344PGN4_9RHOB7.430e-7350.40Ubiquinone biosynthesis O-methyltransferase n=1 Ta... [more]
A0A1M7EQ93_9RHOB4.360e-7248.00Ubiquinone biosynthesis O-methyltransferase n=3 Ta... [more]
A0A1W6CWW7_9RHOB7.970e-7248.43Ubiquinone biosynthesis O-methyltransferase n=1 Ta... [more]
A0A2H5EZH1_9RHOB1.650e-7148.00Ubiquinone biosynthesis O-methyltransferase n=1 Ta... [more]
A0A4R6A7K2_9RHOB4.650e-7149.21Ubiquinone biosynthesis O-methyltransferase n=1 Ta... [more]
A0A553AYA2_9RHOB1.760e-7048.22Ubiquinone biosynthesis O-methyltransferase n=1 Ta... [more]
UPI001CA49C441.930e-7046.80bifunctional 2-polyprenyl-6-hydroxyphenol methylas... [more]
A0A238VWR5_9RHOB2.050e-7047.41Ubiquinone biosynthesis O-methyltransferase n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1182contigEcto-sp13_S_contig1182:9913..14322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score612.8
Seed ortholog evalue9e-173
Seed eggNOG ortholog2880.D8LMR1
Preferred nameCOQ3
Model size978
KEGG rclassRC00003,RC00392,RC01895
KEGG koko:K00568,ko:K00591
KEGG ReactionR02175,R04711,R04988,R05614,R07235,R08769,R08771,R08781
KEGG Pathwayko00130,ko01100,ko01110,map00130,map01100,map01110
KEGG ModuleM00117,M00128
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0004395,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008757,GO:0009058,GO:0009108,GO:0009987,GO:0010420,GO:0016020,GO:0016740,GO:0016741,GO:0019866,GO:0019898,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032259,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051186,GO:0051188,GO:0061542,GO:0061543,GO:0071704,GO:1901576,GO:1901661,GO:1901663
Exons6
EggNOG free text desc.hexaprenyldihydroxybenzoate methyltransferase activity
EggNOG OGsCOG2227@1,KOG1270@2759
Ec32 ortholog descriptionUbiquinone biosynthesis O-methyltransferase
Ec32 orthologEc-02_003340.1
EC2.1.1.114,2.1.1.222,2.1.1.64
Cds size978
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1182.1570.1prot_Ecto-sp13_S_contig1182.1570.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1182 9913..14322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462624.14251-CDS-Ecto-sp13_S_contig1182:9912..101661681462624.14251-CDS-Ecto-sp13_S_contig1182:9912..10166Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1182 9913..10166 +
1681462624.1572678-CDS-Ecto-sp13_S_contig1182:11417..114981681462624.1572678-CDS-Ecto-sp13_S_contig1182:11417..11498Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1182 11418..11498 +
1681462624.1707776-CDS-Ecto-sp13_S_contig1182:12050..121591681462624.1707776-CDS-Ecto-sp13_S_contig1182:12050..12159Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1182 12051..12159 +
1681462624.1787608-CDS-Ecto-sp13_S_contig1182:12809..129541681462624.1787608-CDS-Ecto-sp13_S_contig1182:12809..12954Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1182 12810..12954 +
1681462624.1866095-CDS-Ecto-sp13_S_contig1182:13426..135631681462624.1866095-CDS-Ecto-sp13_S_contig1182:13426..13563Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1182 13427..13563 +
1681462624.19716-CDS-Ecto-sp13_S_contig1182:14070..143221681462624.19716-CDS-Ecto-sp13_S_contig1182:14070..14322Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1182 14071..14322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1182.1570.1

>prot_Ecto-sp13_S_contig1182.1570.1 ID=prot_Ecto-sp13_S_contig1182.1570.1|Name=mRNA_Ecto-sp13_S_contig1182.1570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=326bp
MHRLLWRCSCPRKLRPWAALQQTRHAPRFPHSNSSPSAHSTQAGEGLAQD
KTGTGQEGTQGIRESRHSRANVSEDELEKFRHLQKEWWNPASRQGAGPLH
SMNVTRVQYIVRQVGSSLPEASPHRGSATPLAGLRALDVGCGGGLLSESL
ARLGAEVMGVDPSPENVAVASAHAQGDPLTRTIRYEATTAEELENRGEQF
DLVASLEVIEHVEDPAGFVSSLASLTRPGGMLAISTINRTAKSFALAIVG
AEYLAGMVPVGTHDWRRFVPPEDLAAMLQAHGFPGELVETCGLMYNPVSG
RWKENPGDLDVNYIVTALRGGGEKG*
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mRNA from alignment at Ecto-sp13_S_contig1182:9913..14322+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1182.1570.1 ID=mRNA_Ecto-sp13_S_contig1182.1570.1|Name=mRNA_Ecto-sp13_S_contig1182.1570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4410bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1182:9913..14322+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATCGGCTGTTGTGGCGATGCAGCTGTCCTCGGAAGCTACGTCCATG GGCGGCGCTGCAACAGACTCGGCACGCACCACGCTTCCCCCACAGCAACA GCAGTCCCTCGGCACACTCGACTCAAGCAGGAGAAGGGCTGGCCCAAGAT AAAACGGGAACAGGACAAGAAGGAACACAAGGAATAAGAGAATCACGGCA CAGTAGGGCCAATGTCAGCGAAGACGAGCTCGAGAAATTTCGCCACCTTC AGAAGTGAGCTGAAGAGCACCGCTGTTGTACTGCTTGTACTGCCGTAGTA TGCTTATGCATACGACCAGAGGACAATCCAGGATAGTGAGGAGAAGGTGG TGCGTGCCACAGTCAGCAGCAGTAGCCCTACTGTGGGGGGTGCAAAGTGC GAAGAATCGCATGTGTCAAAACTGTCAACCATGTCATTCGATTGAGTGGT GTGGTGTGGCAGCGCACGTCATGTGCTCAATCGTTCATTTCCTTGTTCCC GCGTAGAACTGCTCCACAGACTCCAGCGATAGCTCACCTGTGGTCACGCT GCATCCCGGATGAAGTGCAGACTGTACTTTAACCTCGCTTCGACTCCGTT TGTTTTAACTTATCAGTGGCAGCGATGGATCGTATGTTGAGTTTTTGTTT TTGTTTGCATTCCAGTGCTTGTCGCGTAGACAGTTCGCCAAACCGTAGTC TTAAAAGCGGGTGGTTGGTAATACGCGTGCGATGTGGCCAAACAGGTTGC TGCTGCTCAGTTGTTTCTCACAGCAGTATCTGCTCATCGCGCTCGTTTGC TTTCACACACGCCTCACGTGATAACGGCATACTGCTGCTGGAAGCACGCT ACAAACAGCAGCAGGAGCAGATGCCGGTTCCTGCCCCGGCGTGGTATGTC ATGTTGACGTGCTCATCTCTCAGGAGCTCTAGACGGTAGCCCGAACGGCT ACCGACTGTTCATCTTGTCCCCGGGGGGCATGAAGCAGCGCTTACTGACC GTTTTGCGAGTAAAGATTTGGGAATGCCTTGAAAGAGACTGGTGGAAGGC ATGAACCATCAAGGGCTGTGCGCCGAACGACAGCACAACAACTCGGAATC CTAACGAAACATAAGCGACTCCATCAGTCTGTCGCGGGCTGTTGGCACCG CCTCTGGATAACTTCCTGCCCGGTCCACCTGTCTATACCTCTCGCTTTCT GGCACTGTTACGATGGAAAAACGGAAATCGAAAAATTTGACAGCACAGTC CGGCGGGAAGCTTACGAAGGGCAGCCCCAGAGGGGTCAAGGGTTCACAGC GGCTGGTTCATGAACGATCTGTGGTGCGCCGCCGTGCCAAATCCGTCAAC TACCTGTCGGTCGCCTTCTGACAATAGCGCCATCCCAGTGCGCTTTCCGC AAGATGGTGCAGCGCATCTCCCAAGCGCCTTCACCCGTGACGGTGTACCC TGATGTTGCCGTTTCCTCCTCTCTAACGTCTGTTCGTGACCTTGACGTTA CGTAGGGAGTGGTGGAACCCGGCTTCTAGGCAAGGAGCGGGGCCGCTGCA CTCCATGAACGTGACGCGCGTGCAGTACATTGTCAGGTACGCACAGCTCA GCGTACAACAGAACGGCTACACAATTATCGGGCGGGTTTCTCTGGAATAC CTTGAGTTTCAAGACGGGCGTTGATTCTGTGGCAACTTTCTTACGAACTG CGAGGCAGGCAGCAGAAGAGCCTGGGTCAAGGTAAACTTCACAGGATTTC CGACACGCTTTTCTAGCCTCCTCGGAGCACAGACTTGAACTTCCAGAGTG GCGCGGGACAAAATGCGACCACCAATTCTGTTCTTTTTCTCGGGTATTAC CACAGGTCTCATTTTCCCATCTTCCCGTTCCGGGGAACCGTACTCCACCA AATTTCCTCGCGCCGACCATCCCGTATCCGCGCACACCGTATCGTGGCCC GGTGGCGCCACCACCTCCCCACCTTCGTGTACACGCGGGAACTCGCTCGA CCTTTGTGTCGCAAAACCATGATCGGCCCTTGCCGGTGTTGCTTTCTGTT CTCGCGCGATGTCCCTCCGCCTCCCGCTCTTGGAGTAGGGTGTGCTGCTG AACGCTAGTGTGTACTGCTAACCATGGAAACGGAACAGGCAGGTGGGTTC GTCGCTGCCCGAGGCTTCGCCGCACAGGGGGTCTGCGACGCCGCTAGCGG GGCTCCGTGCTCTGGACGTCGGGTGCGGCGGGGGGCTGCTGAGCGAGGTG TGCGTAGTGTGGCGTGTGCCTGGTGGGTTTGCGAGGCGAGAACAGGTCGC CCGCCCGCGAGTTTTTTCCGCAGACGTGCAGACGTGTAGTTCGGCTGGTT TTAGTGAGGTGAATTCTGTATGTCCGCAAGGTTCCCTGGTTTTCAAACAT AGGTGCGGATTCGTTTTGTGTCGCTCGGTTTTCGACGACCGGGGTAGTCG GGGATGGGGGTTCCGTGTATTTGAACAGGTTGGCTGACATCTTGCAACCA TCTCTTTGAACGATTGTCCAACATTGTTCATTGCCGCACGACTCCGGTAC ACGTCATGGCCCTGCTGTATTGTAGTTCCTAAAACTGGTAGATAGCGCAA CCTATTGTGGTTAGAACCTTCAATTCAAGGGCTTTTTTGCTTGGCTACAG CACGTGATTTTTGTTTGTCGATGGGATCGTATAGAATATCATTCGCCAGC GTGTTCGCCAAGACACGATTGCTCCGGTTATCTCTTTGCCGCCAGTACAT ATCCAAGAGCTACTTACGTGAGCAACACCCACTCCTCACTTCACGTGGCG AGTTGGCGAAGCGCGAGCACCGCTCCTCCTCTTCCTATTCCCTCTCCGTC TCGTCTGTCTTTGCGCGCGCCCTTTGTTCCTCTCCACCTCGGAACAGTCT TTGGCGCGGCTTGGGGCAGAGGTGATGGGGGTTGACCCGTCGCCAGAGAA CGTGGCCGTGGCATCTGCGCACGCCCAAGGCGATCCGCTGACTCGGACGA TCCGCTACGAGGCCACGACTGCAGAAGAGCTGGAGAATCGAGGTGCGTTC CTGATCTATTGATGCGGGTGGGCAGGGTTCCTCTGAAATGTGGATTTGTT TTTCTCTTCGGTTCAAGGTCCGGCCTCAGCTTTAGCATTCTCTTAAGTAG GAACCAGTAGGCAACAGGGACTAGCTTTCGCCACCGTGCGTGTGGTTGAG CAGGCGTGTACTATATCGCTGTCAAAAGCTAGCTTTTCGCTGTCGTCGCA ATCGCGTGTTTTTGCCCCCTAGCGTTCGATCGCTTTTGCTGGGTGTAGCA GCAGCTCGAGGCGTATTTTGTGAGCTTTCGTGTCGGTGTGATGTGTATGT GCAAGCCCGGGTGTCGTTTAGATAGAGCGCGTCACCGGAGTTTCAGGCGC TTTTAGCGTGCTGCCAACCCGGAATCGCTGGTCTGAAGACAACGGCGACC CGAGGTGCGAAACAAAAAGGTGTCTGTCGACAAACCCAAATGGCCCTGAA ACACGTACAAACAGGAGAGCAGTTCGACCTGGTTGCATCGCTGGAGGTGA TCGAGCACGTGGAAGATCCTGCCGGTTTCGTGTCGTCCTTGGCAAGCCTG ACACGGCCCGGGGGGATGCTGGCCATATCGACGATCAACCGAACCGCCAA GGTAGGTCTCCTGATCATGACTTTCCTCACACCCCAGCACATTACCTGTG AACACGTGCTGCTTCATGTGCCTGGTACCTCGTGTTTGGGGCGGCGCGAT TGTCTTGTCTCTGTAGAGAAGTGTTTCGGATTTTTTTGCATCCGTCGTTG CTGCGGAAAGGTGCGGCATGCATGCGTCTTTCGGGGTTCTACTATTTGGG AAGCATTCACCGTCTCTCTCTCGTATGAACATCGAGGGAGGCAGCACCCT CACAGTTACTTTTTCAGGCCTACGTAGACGAAAAAGTCACCCAGCAGTAG CGTTGAAGGTCTGTCCTTGCTACCACATACTTGTGCCTCTCGAGGTAGTG TGTGACCGCAGGCTTGTTGCTCCCGGTAGGGGGACACGAAACAAGAGACA GTTTGACGGAGGTCGAGCAACACGCGTAGGCTTTGACTTGAACGACAACA ATAACAAACCGTTACCGTTCGCTTCCCATTTCCCCCACCGACGCCCCCAA CTTCACAGTCCTTCGCGCTCGCGATCGTGGGCGCGGAGTACCTGGCAGGC ATGGTGCCGGTGGGGACCCACGACTGGCGGAGGTTTGTCCCCCCAGAGGA CCTCGCGGCGATGCTGCAGGCACACGGGTTTCCAGGAGAGCTCGTGGAGA CGTGCGGGTTGATGTACAACCCGGTGTCGGGCAGATGGAAGGAGAACCCG GGGGATTTGGACGTTAATTACATTGTGACCGCTCTTCGTGGGGGTGGGGA AAAGGGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1182:9913..14322+

>mRNA_Ecto-sp13_S_contig1182.1570.1 ID=mRNA_Ecto-sp13_S_contig1182.1570.1|Name=mRNA_Ecto-sp13_S_contig1182.1570.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=978bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1182:9913..14322+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCATCGGCTGTTGTGGCGATGCAGCTGTCCTCGGAAGCTACGTCCATG
GGCGGCGCTGCAACAGACTCGGCACGCACCACGCTTCCCCCACAGCAACA
GCAGTCCCTCGGCACACTCGACTCAAGCAGGAGAAGGGCTGGCCCAAGAT
AAAACGGGAACAGGACAAGAAGGAACACAAGGAATAAGAGAATCACGGCA
CAGTAGGGCCAATGTCAGCGAAGACGAGCTCGAGAAATTTCGCCACCTTC
AGAAGGAGTGGTGGAACCCGGCTTCTAGGCAAGGAGCGGGGCCGCTGCAC
TCCATGAACGTGACGCGCGTGCAGTACATTGTCAGGCAGGTGGGTTCGTC
GCTGCCCGAGGCTTCGCCGCACAGGGGGTCTGCGACGCCGCTAGCGGGGC
TCCGTGCTCTGGACGTCGGGTGCGGCGGGGGGCTGCTGAGCGAGTCTTTG
GCGCGGCTTGGGGCAGAGGTGATGGGGGTTGACCCGTCGCCAGAGAACGT
GGCCGTGGCATCTGCGCACGCCCAAGGCGATCCGCTGACTCGGACGATCC
GCTACGAGGCCACGACTGCAGAAGAGCTGGAGAATCGAGGAGAGCAGTTC
GACCTGGTTGCATCGCTGGAGGTGATCGAGCACGTGGAAGATCCTGCCGG
TTTCGTGTCGTCCTTGGCAAGCCTGACACGGCCCGGGGGGATGCTGGCCA
TATCGACGATCAACCGAACCGCCAAGTCCTTCGCGCTCGCGATCGTGGGC
GCGGAGTACCTGGCAGGCATGGTGCCGGTGGGGACCCACGACTGGCGGAG
GTTTGTCCCCCCAGAGGACCTCGCGGCGATGCTGCAGGCACACGGGTTTC
CAGGAGAGCTCGTGGAGACGTGCGGGTTGATGTACAACCCGGTGTCGGGC
AGATGGAAGGAGAACCCGGGGGATTTGGACGTTAATTACATTGTGACCGC
TCTTCGTGGGGGTGGGGAAAAGGGGTGA
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