mRNA_Ecto-sp13_S_contig1182.1569.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: D8LMR3_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR3_ECTSI) HSP 1 Score: 559 bits (1441), Expect = 7.330e-197 Identity = 300/315 (95.24%), Postives = 305/315 (96.83%), Query Frame = 1
Query: 1 MPSSKGRMLSFVLVCPTLCSAFLSASRSLSSLDVGRTTKMSAAVTGRLADKVYLVTGSTDGIGKHTASRLVEEGATVLVHGRREAVVREAVEYVGGGKGKVEGIVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPKGVTCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELSGFSYA 945
MPSSKGRMLSFVLVCPTLCSAFL RSLSSLDVGRTTKMSAAVTGRLADKVYLVTGSTDGIGKHTASRL EEGATVLVHGRRE+ VREAVE+VGGGKGKVEGIVADLSSLRGANHLCDEVLR TDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPKG+TCNSLDPGTVNTKMLRAGWG+GGIPVKSANDQFYLATSDDV+DSSGEY XXXXXXXXXXXXXEACRRLW VLEELSGFSYA
Sbjct: 1 MPSSKGRMLSFVLVCPTLCSAFLCTRRSLSSLDVGRTTKMSAAVTGRLADKVYLVTGSTDGIGKHTASRLAEEGATVLVHGRRESAVREAVEHVGGGKGKVEGIVADLSSLRGANHLCDEVLRLTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPKGITCNSLDPGTVNTKMLRAGWGMGGIPVKSANDQFYLATSDDVTDSSGEYXXXXXXXXXXXXXXXXEACRRLWRVLEELSGFSYA 315
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: A0A6V2U0S1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2U0S1_HETAK) HSP 1 Score: 261 bits (666), Expect = 1.490e-79 Identity = 136/269 (50.56%), Postives = 179/269 (66.54%), Query Frame = 1
Query: 148 DKVYLVTGSTDGIGKHTASRLVEEGATVLVHGRREAVVREAVEYVGG--GKGKVEGIVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAPKGV--TCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELSGFSY 942
+K+++VTGSTDGIG+HT+ +L E GA V+VHGR A E V+++ G K++ VADLS + L D++ + +DCL+NNAGVFE F+ + DG E TFAVNV AP+V+T RLL +L K PG R++ V+S+S +DF+NLQFEKGGY +H+SYSLSKL D M E+A R G T N+LDPGTVNTKML AGWG+ GIPV AN++F+LATS DV +G+Y+ S EA RRLW LE +G +Y
Sbjct: 60 EKIFVVTGSTDGIGRHTSKKLAETGARVIVHGRNTARCEETVQWIKDITGNEKIDYFVADLSETSNVHTLADQICEKYSHIDCLINNAGVFEEQFQTTPDGFEMTFAVNVAAPFVLTKRLLPMLQKRPGS-RLIIVSSISQGSRIDFENLQFEKGGYDEHSSYSLSKLCDAMLAFEMAARFGSGAQPTVNTLDPGTVNTKMLLAGWGMCGIPVTRANNEFWLATSPDVEGVNGKYFTSCRESRASQVAYDPEARRRLWEYLERTTGVTY 327
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: A0A7S2V5E2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5E2_9STRA) HSP 1 Score: 254 bits (650), Expect = 8.710e-77 Identity = 148/301 (49.17%), Postives = 193/301 (64.12%), Query Frame = 1
Query: 76 SRSLSSLDVGRTTKMSAAVTGRLADKVYLVTGSTDGIGKHTASRLVEEGA----TVLVHGRREAVVREAVEYV-------GGGKGKVEGIVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARR-APKGVTCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELSGFSY 942
S+ LSSL KM ++ G KVYLVTGSTDGIG+HT RL A TV+VHGR A AV++V GGG +VE IVAD+S++RG L ++ R RLDCL+NNAGVFE ++ ++D LE TFAVNV+APY++T LLDL+ G R++NV+S+S Y ++FDNLQF+ GGYSDHA+YSLSKLL +M++ E A R +T NSLDPGTVNTKML AGWG GI V A+++F+LATSD V +G Y+V +L+ +LE ++G SY
Sbjct: 63 SKHLSSL------KMQSSANGGGGGKVYLVTGSTDGIGRHTCGRLAALAADGDSTVVVHGRDPARCALAVDWVREKSLSAGGGGCRVESIVADISTIRGVASLANQFKARFGRLDCLINNAGVFEQSYQLTEDNLEMTFAVNVMAPYLLTFLLLDLMLPHKGS-RIINVSSISQGYDVNFDNLQFQNGGYSDHAAYSLSKLLMVMYSLESAERIGSPDLTINSLDPGTVNTKMLYAGWGACGIDVSRADNEFWLATSDQVEGINGRYFVGKGDSSASRAAYDSTNRSKLFEILEGITGVSY 356
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: A0A835YNH2_9STRA (Oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH2_9STRA) HSP 1 Score: 232 bits (591), Expect = 4.390e-69 Identity = 135/279 (48.39%), Postives = 178/279 (63.80%), Query Frame = 1
Query: 124 AAVTGRLADKVYLVTGSTDGIGKHTASRLVEEGATVLVHGRREAVVREAVEYVG--GGKGKVEGIVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGG---YSDHASYSLSKLLDIMFNAELARR-APKGVTCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELSGFSY 942
AA T LA K+ LVTGSTDGIG+HTA++L +GATVLVHGR + + +AVE V +V GI+AD+S+L G L V + T LD L++NAG+FE+ R ++DG E FA NVLAP+V TG LL LL +A RV+ V+S+S Y+ + QFE+ G +SDH SYSLSKL D M + E R A +T N+LDPGTVNTKML AGWG+ GI V ANDQ+ LATS+++ SG+Y++S A ++LW ++SGF Y
Sbjct: 2 AAATRPLAGKIALVTGSTDGIGRHTATKLATDGATVLVHGRNQERLAKAVEGVKKQSSNDQVHGILADISTLAGMRTLSTAVHQHTSVLDILVSNAGIFESCRRTTEDGTELVFATNVLAPFVTTGLLLPLL-RASAAARVITVSSMSQGYAAGLVDPQFERDGGSAFSDHRSYSLSKLCDAMLSMEFHERFASPTLTFNTLDPGTVNTKMLDAGWGMCGIAVNRANDQYTLATSENLKGVSGKYFISARETRANPACYDPVARKQLWDYCAKVSGFDY 279
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: A0A2P6TE58_CHLSO (Short chain dehydrogenase reductase family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TE58_CHLSO) HSP 1 Score: 222 bits (566), Expect = 1.980e-65 Identity = 133/276 (48.19%), Postives = 170/276 (61.59%), Query Frame = 1
Query: 142 LADKVYLVTGSTDGIGKHTASRLVEEGATVLVHGRREAVVREAV---EYVGGGKGKV--EGIVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELA---RRAPKGVTCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELSGFSYA 945
L K + VTG+TDGIG HTA RL +GATVLVHGR V +AV E G G G G VADL+SL L +EV + +D L+NNAGVFE R S+DG E T+AVNV AP+++T LL+ + + RVV V+S+SA+ S+D+ NLQ E+G +S H +YSLSKL + +F ELA R A VTCN LDPGTVNTKML AGWG GIPVK AN + AT ++ +SGEY+V +RLW +LEE +G ++
Sbjct: 5 LLGKTFFVTGATDGIGAHTAQRLAAQGATVLVHGRNPGRVEQAVAAVERAGSGSGGAPPRGFVADLASLAQVRRLAEEVAASSPSVDVLINNAGVFEQQLRKSEDGFELTWAVNVAAPFLLTACLLEAVRE-----RVVVVSSISAASSIDWGNLQQERG-FSAHNAYSLSKLAEQLFTFELADRLRAAGSPVTCNCLDPGTVNTKMLSAGWGSIGIPVKEANYELKAATDPALAGTSGEYFVGGRIARPPSIARDKAEQQRLWRLLEEQTGAKWS 274
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: A0A061S8W3_9CHLO (Short chain dehydrogenase reductase family n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8W3_9CHLO) HSP 1 Score: 221 bits (562), Expect = 7.280e-65 Identity = 133/268 (49.63%), Postives = 166/268 (61.94%), Query Frame = 1
Query: 151 KVYLVTGSTDGIGKHTASRLVEEGATVLVHGRREAVVREAV---EYVGGGKGKVEGIVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRAP-KGVTCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELSGFSY 942
KV+LVTGSTDGIG HTA L G +V+VHGR E VR+AV E V G GKV D SSL+ L D+V R +D L+NNAGV++ S DG E T+AVNVLAP+V+T L +++ RVVN AS+SA +S+D DNL EKG +S H +YSLSKLLDI+ ELA R K T N+LDPGTVNTKML AGWG GIPV+SA D+FY++TS D+ SGEY+V LW + E+ +G +
Sbjct: 13 KVFLVTGSTDGIGLHTAKLLAAGGGSVIVHGRNELRVRDAVAEVERVARGNGKVASYTRDFSSLQEVKRLGDDVKRDFATIDVLVNNAGVYKEGKELSQDGFEMTYAVNVLAPFVLTSALHNIVTS-----RVVNTASISAGHSVDLDNLNQEKG-FSSHNAYSLSKLLDIILTFELAERLKEKPFTVNTLDPGTVNTKMLLAGWGPIGIPVESA-DEFYVSTSPDLEGVSGEYFVGKRRTRAPAAAYDRGLRETLWRLWEQQTGVRF 273
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: A0A7S1HEF3_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HEF3_HEMAN) HSP 1 Score: 221 bits (563), Expect = 1.850e-64 Identity = 135/310 (43.55%), Postives = 189/310 (60.97%), Query Frame = 1
Query: 46 PTLCSAFLSASRSLSS--LDVGRTTKMSAAVTGRLADKVYLVTGSTDGIGKHTASRLVEEGATVLVHGRREAVVREAVEYVGGGKGKVEG-----IVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARR---APKGVTCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELSGFSYA 945
P+L A +AS SL+S + +MS G + K+ LVTGSTDGIG+HTA++L ++G VL+HGR + + V+ + K K G +AD +SL L E+ + R+D L+NNAGVF + + DG E TF VNVLAP+++T +LDL+ K+ G +++ V+S+S SY+LDFDNLQ +KG +SDH+SYSLSKL + M ELA R A GVT N+LDPGTVNTKML AGWG+ GI + AN Q LAT + +G+Y+V E +RLW ++ +L+G Y+
Sbjct: 12 PSLVLALTAASLSLASGFASPPLSLRMSG---GDGSKKIALVTGSTDGIGQHTATKLAQDGFKVLIHGRSQKRIDATVQRI---KDKAPGCELDTFLADFASLEDVRKLSKELHAKCPRIDLLINNAGVFSQSMQKTVDGNEMTFQVNVLAPFLLTSLVLDLVKKSEKG-KIIIVSSISQSYALDFDNLQMQKG-FSDHSSYSLSKLCNAMHAIELAERLKGALPGVTVNTLDPGTVNTKMLEAGWGMCGIDLSRANYQHTLATDPSLDGETGQYFVGGRNTKASPPCYDTEQRQRLWKIMTDLTGADYS 313
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: A0A1L7H7G4_SACKO (Retinol dehydrogenase 14-like protein 094 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=A0A1L7H7G4_SACKO) HSP 1 Score: 219 bits (558), Expect = 2.760e-64 Identity = 122/270 (45.19%), Postives = 169/270 (62.59%), Query Frame = 1
Query: 142 LADKVYLVTGSTDGIGKHTASRLVEEGATVLVHGRREAVVREAVEYV--GGGKGKVEGIVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRA-PKGVTCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELSGFSY 942
L+ +VYL+TGSTDGIGKHTA RL + G TVLVHGR A + VE + G +E AD SSL + EV R R+D L+NNAGV+E S +G E T AVNVLAP+++T LLDL+ K R++ V+S++ +Y++DF NLQFE+ YS A+Y LSKL DI+F+ EL+ R P G+ N DPGTVNT ML +G GIP++ A+++FYLAT + +G+Y+V + RRLW ++E+++G +Y
Sbjct: 3 LSGRVYLITGSTDGIGKHTALRLAQAGGTVLVHGRNRAKGEKVVEELKTATGNPNIELFTADFSSLDHIRQMSREVHERHSRIDVLINNAGVWENQRILSQEGYEMTLAVNVLAPFLLTSLLLDLIPKGRVDSRILIVSSMTQAYNIDFSNLQFERD-YSGFAAYGLSKLCDIVFSYELSDRLRPLGIIVNCCDPGTVNTNMLMKSYGPIGIPIEQADNEFYLATDPKFTGVTGKYFVQLQDTSSASISYDIKTRRRLWQIMEQMTGATY 271
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: A0A5J4XR04_9CHLO (Short chain dehydrogenase reductase family n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XR04_9CHLO) HSP 1 Score: 217 bits (552), Expect = 1.940e-63 Identity = 122/270 (45.19%), Postives = 168/270 (62.22%), Query Frame = 1
Query: 136 GRLADKVYLVTGSTDGIGKHTASRLVEEGATVLVHGRREAVV---REAVEYVGGGKGKVEGIVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELARRA-PKGVTCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELSG 933
G ++ K YLVTGSTDGIG+HTAS+LV GA VL+HGR + V + ++ + G K+ +L+S + + + +D L+NNAGVFE S+DG E T+A+NVLAP+++T L D++ R+VNV+S+SA S+DFDNLQ EKG +S H SYSLSKL +MF +LA PKGVT N LDPGTVNTKML AGWG GI VK AN ++ LAT ++ +G+YYV+ + +RLW ++ + +G
Sbjct: 4 GEVSGKTYLVTGSTDGIGRHTASKLVAAGANVLLHGRTQEKVTATKRDLDSIAKGN-KISSYTYNLASFSQIRKFAEAIRANHNNIDVLINNAGVFETQRSLSEDGYEMTWAINVLAPFLLTSLLKDVVTD-----RIVNVSSISAGSSIDFDNLQQEKG-FSSHNSYSLSKLASMMFTCDLAEHMKPKGVTVNCLDPGTVNTKMLIAGWGACGIDVKDANYEYKLATDPSLAKETGKYYVNGRESRLPAVAKDQKFRKRLWQIMTDQTG 266
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Match: A0A7S0QHA5_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHA5_9CRYP) HSP 1 Score: 218 bits (554), Expect = 8.180e-63 Identity = 129/268 (48.13%), Postives = 161/268 (60.07%), Query Frame = 1
Query: 142 LADKVYLVTGSTDGIGKHTASRLVEEGATVLVHGRREAVVREAVEYV--GGGKGKVEGIVADLSSLRGANHLCDEVLRRTDRLDCLLNNAGVFEADFRHSDDGLEYTFAVNVLAPYVITGRLLDLLAKAPGGGRVVNVASLSASYSLDFDNLQFEKGGYSDHASYSLSKLLDIMFNAELAR---RAPKGVTCNSLDPGTVNTKMLRAGWGLGGIPVKSANDQFYLATSDDVSDSSGEYYVSXXXXXXXXXXXXXEACRRLWGVLEELS 930
L K LVTG+TDGIG HTA++L G VL+HGR ++EA+ + K VE AD SSLR + EVL + LD L+NNAGVF R ++DG E TF VNVLAP+++T LL ++AKA G RV+ V+S+S S +D+DNLQ EKG +S H SYSLSKL + M ELAR R V+ N+LDPGTVNTKML AGWG G+ V AND+F LAT SG+Y+V AC LW LE L+
Sbjct: 63 LGQKTALVTGATDGIGLHTATKLANAGYFVLIHGRDPVRIQEALRKIRLSNPKAGVESFQADFSSLRDVSRFASEVLEQYQCLDLLINNAGVFSQQMRTTEDGNEMTFQVNVLAPFLLTKALLPIVAKAQAG-RVIIVSSISQSSRIDWDNLQMEKG-FSSHESYSLSKLCNAMHALELARATARTAPHVSVNTLDPGTVNTKMLLAGWGYCGMEVADANDEFLLATDPRFEGVSGKYFVGGRERQAAAPCYDAAACAELWRRLEALT 328 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1182.1569.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1182.1569.1 >prot_Ecto-sp13_S_contig1182.1569.1 ID=prot_Ecto-sp13_S_contig1182.1569.1|Name=mRNA_Ecto-sp13_S_contig1182.1569.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp MPSSKGRMLSFVLVCPTLCSAFLSASRSLSSLDVGRTTKMSAAVTGRLADback to top mRNA from alignment at Ecto-sp13_S_contig1182:1115..5595+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1182.1569.1 ID=mRNA_Ecto-sp13_S_contig1182.1569.1|Name=mRNA_Ecto-sp13_S_contig1182.1569.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4481bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1182:1115..5595+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1182:1115..5595+ >mRNA_Ecto-sp13_S_contig1182.1569.1 ID=mRNA_Ecto-sp13_S_contig1182.1569.1|Name=mRNA_Ecto-sp13_S_contig1182.1569.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1182:1115..5595+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |