mRNA_Ecto-sp13_S_contig11801.1555.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: D7FRE0_ECTSI (DUF1084 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRE0_ECTSI) HSP 1 Score: 367 bits (943), Expect = 1.250e-119 Identity = 196/198 (98.99%), Postives = 196/198 (98.99%), Query Frame = 2
Query: 2 ATFLHALGKLRMLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVGDGGSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRV 595
ATFLHALGKLRMLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVG GSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRV
Sbjct: 22 ATFLHALGKLRMLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVGGDGSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRV 219
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: A0A835Z1P3_9STRA (DUF1084 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P3_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.120e-50 Identity = 103/197 (52.28%), Postives = 137/197 (69.54%), Query Frame = 2
Query: 32 RMLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIG--ALNMRSV-----------GDGGSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLR 583
+M + L+T+KLF M++LL C+TR MGF+TIG ALN++S+ GD G+ ++ D+D+RFY+K +LVLFD PDF+ +SAY+LLAVVWAEAFL SR HWLSAR Y++ L+ Y++FN+ALY QL+LY LFLPS LY +T+VN LPLLLA LF YLT +FSGFPY++E A+ R
Sbjct: 30 KMRKASTGGLNTEKLFVMTMLLACVTRVMGFVTIGECALNLQSIRVGYDPHRHDGGDSGADDDDDYRQDSDQRFYDKCVLVLFDFPDFVALSAYALLAVVWAEAFLASRSHWLSARRYRQGFLMAYLVFNAALYMAQLLLYGALFLPSSPTGWAARALYAALTTVNFGLPLLLAALFMYLTVSFSGFPYRTERALRR 226
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: W7TTU2_9STRA (DUF1084 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTU2_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.530e-46 Identity = 94/199 (47.24%), Postives = 138/199 (69.35%), Query Frame = 2
Query: 26 KLRMLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVGDGGSSSRR------SWQN--DADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRVS 598
+LR LH + ++T KLF +SVLL C R + F+ +GA +++S+ +S R SW + D D +FYEK +L+LF+LPDF+ VSAY LLA+VWAEAF+QSR HWLS + ++R LL Y++FN+ LY GQL+LYTLLFLP NQ + +++L + +N LP++L +LF YL+ F+GFPYKS A +++++S
Sbjct: 28 RLRNLHTRHPEMNTTKLFVLSVLLSCGMRCLSFIALGAFSVQSIAIDNDASGRASSPSSSWSSTQDPDTQFYEKALLILFNLPDFVFVSAYVLLALVWAEAFIQSRSHWLSIKQFRRMWLLSYLVFNACLYLGQLVLYTLLFLPHGNQDFLSKIIFLTLCVINFSLPIILLLLFFYLSIMFAGFPYKSRRAPAKLNKIS 226
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: A0A7S1U079_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U079_9STRA) HSP 1 Score: 154 bits (388), Expect = 4.910e-38 Identity = 82/196 (41.84%), Postives = 134/196 (68.37%), Query Frame = 2
Query: 11 LHALGKLRMLHG-KSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVGDGGSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRV 595
++ +L+MLH ++LDT+KLF +++LL C+ RT+ F+ + +L ++S+ GG + + + D DE FYEK +LV+FDLPD+ IV+AY LL +V+AE FL +RRHWL +R+ ++ Y+ NS LY Q+ LYTLLF+P QS ++ +L++ + +++ LP+ +A+ + YLT FS FPY+S+ A R+ +V
Sbjct: 25 VYTFSRLKMLHAITGQALDTQKLFVVTLLLTCVLRTLSFVGLTSLAVQSIEYGGDDNDDTGERDEDEEFYEKAVLVMFDLPDYTIVTAYLLLVIVYAETFLHARRHWLDPIQMRRRWVVWYLGANSVLYGVQITLYTLLFVPRVPQSLLIQLLFITLGAISFCLPIAVAIGYFYLTYRFSAFPYRSQHAAKRVKKV 220
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: A0A7S1U7L3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7L3_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.390e-36 Identity = 88/220 (40.00%), Postives = 140/220 (63.64%), Query Frame = 2
Query: 11 LHALGKLR--MLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMR--SVGDGGSSS----------RRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRVSATDIG*EGER 628
L+ L KLR + + S+ LDT+KL A S+ +C+ R + F+TI +N R ++G GSS+ ++ Q + D F+EK+MLVLFDLPD+MIV+ ++LL +VWAE FL SR HWLS++ ++R+ L+GY++FN+ +YA QL+LY+LLF+P+ + G+ +L+ + +N +P+ + YL C F+ FPYK + L ++R + I G R
Sbjct: 24 LYILSKLRKFLKYSGSKLLDTRKLLAASMFFVCVFRCLTFITIALVNRRGYALGFHGSSNPVATVVQEGPQKLRQANLD--FFEKSMLVLFDLPDYMIVTTFTLLVLVWAEVFLDSRAHWLSSKTFRRRALIGYLVFNATVYATQLVLYSLLFVPTISTKGLRVLLFCSVAVLNFFVPITFLGVAIYLYCQFAAFPYKGVRSRLALERTTRVVIWWTGGR 241
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: A0A7S0PTK0_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PTK0_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.120e-25 Identity = 77/188 (40.96%), Postives = 115/188 (61.17%), Query Frame = 2
Query: 26 KLRMLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVGDGGSSSRR-----SWQNDA-DERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYT-LLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSE 568
K +L + R + TKKL +SV L+C R M + + A+N+ +V S S +A D++FY+K M VLFDLP+ ++VS Y+LL +VWAE FL+SR H S +KR L YM+FN+ LYA QL+LYT + F+PS V +++Y IT +N L++ + + YL+ FSGFP++S+
Sbjct: 35 KFSVLKLRHREMGTKKLLVLSVGLVCAVRIMTILGVVAMNIANVRAHYSLQPTDLYYVSTTTEAKDQKFYDKAMTVLFDLPNCIVVSTYALLTLVWAECFLESRFHTESTLAWKRSGLKCYMVFNALLYATQLVLYTCIFFVPSVKS--VRTIIYAAITGINFTAVLIVLIFYLYLSVNFSGFPFRSQ 220
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: A0A5D6XPJ3_9STRA (DUF1084 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPJ3_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.080e-24 Identity = 78/208 (37.50%), Postives = 117/208 (56.25%), Query Frame = 2
Query: 62 DTKKLFAMSVLLLCLTRTMGFMTIGALNMRSV-------GDGGSSSR--------RSWQNDADER---FYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLS------------VLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRV 595
T +L +SV L CL RT F T+ + ++ G GG+ R +DA ++ FY K + VLF+LPDF+ VS+Y LL +VWAEAF SRRHW SA ++R+ ++ Y+IFN LY QL+LYT LFL ++ G+ +++ + + +L LPL++ + YLT + SGFP+KS++A R+ RV
Sbjct: 46 STVQLLVLSVALGCLFRTATFATLCVFDSQNAELLPAGGGLGGARGRVVVGGDDADLGDDDAAQKELDFYNKVVAVLFNLPDFLFVSSYLLLVLVWAEAFQSSRRHWFSAVDFRRRWMIFYLIFNGTLYVMQLVLYTALFL--LDKDGIFKDDKQDRLNLIPEMIFYVVAATDLFLPLIIFSTWFYLTLSLSGFPFKSQSARFRLKRV 251
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: A0A7S4QPE0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QPE0_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.310e-24 Identity = 72/190 (37.89%), Postives = 117/190 (61.58%), Query Frame = 2
Query: 59 LDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVGDG----------GSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRVS 598
L+T+KL +SV +C+ R M F+ + +++ +V ++S + D ++ FY+ +M VLFDLP+ ++VS Y LL +VW E FLQSR H + + Y + L+GYMIFN LY+ Q++LY L+FLP ++ V +VLY+ +T+ NL+ LL+ V + YL+ FSGFP +S + + ++S
Sbjct: 53 LNTQKLLVVSVATVCILRIMSFIGVALMDVANVRAHYALQPTGYHIHTNSTIAEPRDKNQSFYDSSMTVLFDLPNAIVVSTYVLLTLVWVECFLQSRFHTMDSSHYHSRGLVGYMIFNIILYSIQMVLYVLIFLPGV-KNVVRTVLYVVMTTTNLVAVLLVFVFYVYLSVAFSGFPPRSLHLLASLRKIS 241
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: A0A6V2BXQ0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BXQ0_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.350e-24 Identity = 72/190 (37.89%), Postives = 117/190 (61.58%), Query Frame = 2
Query: 59 LDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVGDG----------GSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQSGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRVS 598
L+T+KL +SV +C+ R M F+ + +++ +V ++S + D ++ FY+ +M VLFDLP+ ++VS Y LL +VW E FLQSR H + + Y + L+GYMIFN LY+ Q++LY L+FLP ++ V +VLY+ +T+ NL+ LL+ V + YL+ FSGFP +S + + ++S
Sbjct: 53 LNTQKLLVVSVATVCILRIMSFIGVALMDVANVRAHYALQPTGYHIHTNSTIAEPRDKNQSFYDSSMTVLFDLPNAIVVSTYVLLTLVWVECFLQSRFHTMDSSHYHSRGLVGYMIFNIILYSIQMVLYVLIFLPGV-KNVVRTVLYVVMTTTNLVAVLLVFVFYVYLSVAFSGFPPRSLHLLASLRKIS 241
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Match: D0MXT9_PHYIT (DUF1084 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MXT9_PHYIT) HSP 1 Score: 114 bits (286), Expect = 2.390e-24 Identity = 64/155 (41.29%), Postives = 99/155 (63.87%), Query Frame = 2
Query: 161 DGGSSSRRSWQNDADERFYEKTMLVLFDLPDFMIVSAYSLLAVVWAEAFLQSRRHWLSARVYKRQLLLGYMIFNSALYAGQLILYTLLFLPSFNQ----------SGVLSVLYLFITSVNLLLPLLLAVLFSYLTCTFSGFPYKSEAAMLRMDRV 595
DGG ++ + + D FY K + VLF+LPDF+ VS+Y LL +VWAEAF SRRHW SA +++R+ ++ Y++FN LY QL+LY LFL N S + ++++ + + +L LP+++ + YLT + SGFP+KS++A LR+ RV
Sbjct: 107 DGGDAAGSHAEAELD--FYNKVVAVLFNLPDFLFVSSYLLLVLVWAEAFQSSRRHWFSAAMFRRKWMIFYLVFNGGLYLTQLVLYASLFLYDTNGIFDHEKQDRLSPIPAMIFYLVAAADLFLPIIIFSTWLYLTLSLSGFPFKSQSAQLRLQRV 259 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11801.1555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11801.1555.1 >prot_Ecto-sp13_S_contig11801.1555.1 ID=prot_Ecto-sp13_S_contig11801.1555.1|Name=mRNA_Ecto-sp13_S_contig11801.1555.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp MLHGKSRSLDTKKLFAMSVLLLCLTRTMGFMTIGALNMRSVGDGGSSSRRback to top mRNA from alignment at Ecto-sp13_S_contig11801:2..3759- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11801.1555.1 ID=mRNA_Ecto-sp13_S_contig11801.1555.1|Name=mRNA_Ecto-sp13_S_contig11801.1555.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3758bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11801:2..3759- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11801:2..3759- >mRNA_Ecto-sp13_S_contig11801.1555.1 ID=mRNA_Ecto-sp13_S_contig11801.1555.1|Name=mRNA_Ecto-sp13_S_contig11801.1555.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=582bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11801:2..3759- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |