mRNA_Ecto-sp13_S_contig1180.1553.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: D7G7M3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M3_ECTSI) HSP 1 Score: 113 bits (283), Expect = 1.130e-27 Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 1
Query: 1 VHCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMV 171
+HCAASQGLTFTVQALLAEG IACDAKDRFGKTPLHWAAGQGHVDIVL LMDAGA+V
Sbjct: 61 IHCAASQGLTFTVQALLAEGRIACDAKDRFGKTPLHWAAGQGHVDIVLVLMDAGALV 117
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: A0A6H5L5T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T2_9PHAE) HSP 1 Score: 104 bits (260), Expect = 1.720e-24 Identity = 49/57 (85.96%), Postives = 52/57 (91.23%), Query Frame = 1
Query: 1 VHCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMV 171
+HCAASQGLTF VQALLAE ACDAKDRFGKTPLHWAAGQGHVD VLAL+DAGA+V
Sbjct: 53 IHCAASQGLTFAVQALLAERRTACDAKDRFGKTPLHWAAGQGHVDTVLALVDAGALV 109
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: A0A6H5L664_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L664_9PHAE) HSP 1 Score: 102 bits (255), Expect = 8.230e-24 Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 1
Query: 1 VHCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMV 171
+HCAASQGLTF VQALLAE ACDAKDRFGKTPLHWAAGQGHVD VLAL++AGA+V
Sbjct: 60 IHCAASQGLTFAVQALLAERRTACDAKDRFGKTPLHWAAGQGHVDTVLALVNAGALV 116
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: W6KKL4_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KKL4_9TRYP) HSP 1 Score: 56.6 bits (135), Expect = 5.450e-8 Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 1 VHCAASQGLTFTVQALLAE---GHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMVDSRDHFKATPLMLAALGG 225
+H A G QA++A DA D G TPLH+A QGH+++ + L++AGA ++RD K TPL LA+L G
Sbjct: 68 LHHVAYAGNLDLAQAIIAAFPAESAGLDAPDAGGWTPLHYAVDQGHLEMTMLLLEAGANANARDESKRTPLHLASLRG 145
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: W2S116_9EURO (HET domain-containing protein n=1 Tax=Cyphellophora europaea CBS 101466 TaxID=1220924 RepID=W2S116_9EURO) HSP 1 Score: 56.6 bits (135), Expect = 1.480e-7 Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 1 VHCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMVDSRDHFKATPLMLA 213
+HCAA G V++LLA+G +A D+FG PLH+AA GH D+V ++AG RDH+ T A
Sbjct: 114 LHCAAEAGNLGLVRSLLAKGADP-EAVDKFGDFPLHYAAFNGHTDVVRLFVEAGVRTSHRDHWGRTAFACA 183
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: UPI001EAFCD00 (ankyrin repeat domain-containing protein 50-like n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFCD00) HSP 1 Score: 56.2 bits (134), Expect = 1.960e-7 Identity = 28/75 (37.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 1 VHCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMVDSRDHFKATPLMLAALGG 225
+H A+ +G V+ +L++G + KD+ G+TP+ WAAG GH ++V L+ GA V D F L A GG
Sbjct: 11 LHSASEEGDLSRVEVILSQGGTDINCKDKIGRTPVMWAAGNGHKEVVELLVSKGAKVSIVDRFGNNILHSAGRGG 85
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: UPI00201F4CB4 (ankyrin repeat domain-containing protein 50-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F4CB4) HSP 1 Score: 56.2 bits (134), Expect = 2.000e-7 Identity = 28/75 (37.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 1 VHCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMVDSRDHFKATPLMLAALGG 225
+H A+ +G V+ +L++G + KD+ G+TP+ WAAG GH ++V L+ GA V D F L A GG
Sbjct: 123 LHSASEEGDLSRVEVILSQGGTDINCKDKIGRTPVMWAAGNGHKEVVELLVSKGAKVSIVDRFGNNILHSAGRGG 197
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: A0A3R7D4B6_CLOSI (Ankyrin repeat domain-containing protein 42 n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=A0A3R7D4B6_CLOSI) HSP 1 Score: 55.8 bits (133), Expect = 2.170e-7 Identity = 31/75 (41.33%), Postives = 41/75 (54.67%), Query Frame = 1
Query: 4 HCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMVDSRDHFKATPLMLAALGGH 228
H AA G T++ L+ EG I + +D G TPLH AAGQGHV I+ L++ GA +H P +A GH
Sbjct: 112 HSAAYDGDLTTLRTLIEEGVIKVNERDEQGSTPLHKAAGQGHVKIIQWLLENGADPSIANHMGERPADVARRFGH 186
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: A0A4Q2E1A9_9AGAR (Uncharacterized protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2E1A9_9AGAR) HSP 1 Score: 54.3 bits (129), Expect = 2.420e-7 Identity = 29/76 (38.16%), Postives = 42/76 (55.26%), Query Frame = 1
Query: 1 VHCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMVDSRDHFKATPLMLAALGGH 228
VH AA +++L+A+ ++ D +TPLHWAA G +DIV L+D A D D+ TPL++A GH
Sbjct: 5 VHTAALNKQLMVIRSLIADDPNLINSLDVDERTPLHWAASSGALDIVRFLLDQKAEADRPDNSGWTPLLIAVSAGH 80
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Match: UPI001EE58F58 (ankyrin repeat and KH domain-containing protein mask-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE58F58) HSP 1 Score: 55.8 bits (133), Expect = 2.800e-7 Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 1 VHCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALMDAGAMVDSRDHFKATPLMLAALGGH 228
V+ A++ G V+ L++ + D KDR G+TPL WAAG+GH D+V + GA + D ++ L A GGH
Sbjct: 120 VYNASTSGDLSKVKFALSQEQVDIDCKDRIGRTPLMWAAGKGHRDVVELFVKRGANLLLTDRSRSNILHYACAGGH 195 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1180.1553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1180.1553.1 >prot_Ecto-sp13_S_contig1180.1553.1 ID=prot_Ecto-sp13_S_contig1180.1553.1|Name=mRNA_Ecto-sp13_S_contig1180.1553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp VHCAASQGLTFTVQALLAEGHIACDAKDRFGKTPLHWAAGQGHVDIVLALback to top mRNA from alignment at Ecto-sp13_S_contig1180:18359..18586+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1180.1553.1 ID=mRNA_Ecto-sp13_S_contig1180.1553.1|Name=mRNA_Ecto-sp13_S_contig1180.1553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=228bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1180:18359..18586+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1180:18359..18586+ >mRNA_Ecto-sp13_S_contig1180.1553.1 ID=mRNA_Ecto-sp13_S_contig1180.1553.1|Name=mRNA_Ecto-sp13_S_contig1180.1553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=228bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1180:18359..18586+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |