mRNA_Ecto-sp13_S_contig1180.1551.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1180.1551.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE) HSP 1 Score: 2788 bits (7226), Expect = 0.000e+0 Identity = 1847/2423 (76.23%), Postives = 1920/2423 (79.24%), Query Frame = 1
Query: 28 QTSKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGEFDAQEAAFAASNGGQ-------------------------RGSAVD----------W---------RREGRVGTAERVPAGRRRWTCSPW--RRRRRSPSRRGA------------------------------------------LWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGKFDAQEAAFAASIDGFVPEDPADRPLTGAKPPP--AAPAAASGSVAGDGDDRSLTGGGKGAWVPLSEFPPGEEDGPVRSGDGGDALVKKASAGGVVDAAGQGKNSAGDGAVSSEYMTALGFVKVREEADPFSMDLGSVKKGNIVKVMETFKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGEFDAQEAAFAANSGGALPEDPSDRPLTGAKPPPDAATAATGDSEDRPLTGGGKGAWVPPSEFPPGEEDGPVSSG-SCVVGDEAFSVKQSAGEGVDAGGQADGSAAGAPISREYLTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSKLWVRVCYRGRDDGWVLTANKRGPTLVPSEDQDSAVVEFDAQEAAFASSSGGTLPEDPSDRPLTGAKPKPPPAAPTAATGDSEDRPLTGGGKGAWVPPSEFPPGQEDGPVSYGGGGGSTGGVTPGPEDERPLRAAQKAEGGEGAASGGAMSEGDEVPVEYMKALGVIKLREEADPFSMDLGVVQKEHVVKVLEMKDLWARVAYRGKTDGWVLTENKRGKMLTAAEDREEAEAAWAEQEQNASQDDGNGNVPPASRDDRPIGGKRSTQHDGSDPGADNGGLETTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAKPWQRRGATKSDPLADGTDEXXXXXXXXXXXXXKKTGALLKDSTAEVGGSAVDEXXXXXXXXXXXXXXXXXXXXXXRPGGGVRAGAVDDGSSSDKPGGDDAVVAKPWEAATRAASETVEEAAVAPEGVEREAGEGDHSTGGEDGLAGLKACLEERDWKKRVAEFEAASRACRSRVEGAAGTVGPLLPRMLQDKNVQAVDSAVDTLTAYLSLRSNMGAEEGSSLASALAERALCCGRAPVEAKADAAAXXXXXXXXXXGGLARRGAWLTLAARAGGLENEFFPPAGDEGGRGRSKVAAAAPKAVSGCVRAMSAGIGKGRTVVAGGGDSRKEVYSAAKAMLRSSKLPVKMAGISLSGALYAAEGDVARDDLGVEDMEARIKSQLERAFADADAAAVSAAGSGNTSPIAEKPLAVPASPPIRPPATPTPGGGGDSG-------AIDLLSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDTVDQGVAPLGGNKPAEAAKSGTPDSTVDDELWSEDDEDEDGRGAGLEGDDHYTDAEAXXXXXXGGTAVKIRGVNDKEEDD----LLDGLSADLPDLRITTSPPEDDGSRAAPPGGAGEVGRAKPRLGLAEKMSSERDLGAAAGAAAETPRRLSTPGYWESAKKRGVRTTVERDTQFLGTQMLVLPEGERSAWDDILDDMLLKAPPADPLRWSQHRLSADGAPGIVGPGGGSAPHSARPHEEDALKLMPXXXXXXXXXXXXXXXXXXXXXLLRPDSLRSVDDDDG--AGSGRGSLGFEVGSDSEDRRRMSWKXXXXXXXXXXXX--EAAPLSLPESLPASFGRGEEDATVGTAAESRPSWNEQQXXXXXQEMLAVRSSADESVRERMARFSARRRQARQAPTPRTGEEPLQEAPADGATDDGEGGAAANVVATAGRRHLLRGPGSWTSGIGSGSGPGGVRSPRLSRAGHXXXXXXXXXXL---GSPSSSSNLVVTQEALGNLNNNLASLMSVKRQASTSENRESRRQXXXXXXXXXXXXXXXXXXXXXTEAAELGAAEEAEAVALGASPAAXXXXXXXXXXETIAARRRALEARRASRRSRGGDAPGGSAAALREFQDESVIDVSPAARGXXXXXXXXXXXRLGSILPADTVLESEDESYATPRGGRGSSESVAXXXXXXXXXXXXXXXXXXXXAGHETSRGRGGPGFFGQQGSDPYRRKERYSTISTPNDXXXXXXXXXXRSGSDSDAAYDSLRGVLGKVSLSKYFKEFRRREVRLEDLQHLTEGDLTEMGMPVGPRKRLLVEVHGVATPVRTPVAGAPMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KAAVRSPRQSYPGGARTAMFSPXXXXXXXXXXXXXXXXXXXXXXXX---AEVTSRRSVPLATSAASLRARLKGEENQKALPGRKSVSPRPSLGSTRARASSEGMAAAAAVSGTDENGLEGDGAGHQASPTRRQKAVSPRRASSFAPSAGGGDRRDDHRATIGGSGLAAKRA 6957
+TSKLWVRVCYRGREDGW+LTANKRGPTLVPSEDQ SAAGEFDAQEAAFA+S+GG G + D W + +G VG+ + + + + R + + S GA LWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAG+FDAQEAAFA+S G +PEDPADRPLTGAKP P AP AASGS GDGD+R+LTGGGKGAWVP SEFPPG+E GPV SGDGGDALVK+ASAG VVDAA QG +SAGD AVSSEYMTALGFVKVREEADPFSMDLGSVKKG+IVKV+ET +LWVRVCYRGREDGWVLTANKRGPTLVPSEDQ SAAGEFDAQEAAFA++SGGA+ EDPSDRPLTGAKPPP A T ATGDSEDRPLTGGGKGAWVPPSEFPPGEED P SSG S VVGDEAFSVK SAGEGVDAGGQADG+A GA IS EYLTALGFVKVREEADPFSMDLGSVKKGDIV+VLETSKLWVRVCYRGR+DGWVLTANKRGPTLVPSEDQDSA EFDAQEAAFASSSGG LPEDP+DRPLTGAKPKPPPAAPTAATGDS DRPLTGGGKGAWVPPSEFPPG+EDG VSYGGGGGSTGGVTPGPEDER LRAAQKAEGGEG ASGG +S GDEVPVEYMKALGVIKLREEADPFSMDLGV+QKEHVVKVLEMK LWARVAYRG TDGWVLTENKRGKMLTAAED+EEAEAAWAEQEQNA QDDGN NVPPASRDDRPIGGKRSTQHDG DPGAD+G LETTGA XXXXX PAKPWQRRGA KSDPLADG++ XXXXXXXXXX K GAL KDSTAEVGG A D XXXXXXXXXXXX RPGGGVR GAVD GSSS KPGGDDAVVAKPWEAA RAASETVEEAAV P GVER AGEG G EDGLAGL+AC EERDWKKRVA FEAASRAC SRVEGA TVGPLLPRMLQDKNVQAVD+AV+TLTAYLSLRSNMGAEEGSSLASALAERALCCGRAPVEAKADAAA GGLARRGAWLTLAARAGGLENEFFPPAG+EGG GRSKVAAAAPKAVSGCVRAMSAG+GKGRT+VAGGGDSR+EVYSAAKAML SSKLPVKMAGISLS ALYAAEGDVARDDLGVE MEARIKSQLERAFADA PASPPIRPPAT AI LL D XXXXXXX +GVAPLGG++PAEAAKSG P+ TVDDELWSED XXXXXX LLDGLSADLPDLRIT SPPE DGS AAPP GAGEVGRAK RLGLAE++SSER L AAAGAAAETPR STPGY SAKKRGVRT+VER+TQFLGTQMLVLPEGERSAWDDILDDMLLKAPPADPLRWSQHRLSADG PGIVGPGGGSAPH ARP EEDALKLM XXXXXXXXXXXXXXXXXXXX LLRPDSLRSV DDDG +GSGRGS+GFEVGSDS+DR XXXXXXXXXXXX EAAPLSLPES ASFGRGEED VGT AESRPSWNEQQ Q+MLAVRSSADESVRERMAR SARRRQ+RQA PRTGEEPLQ+APAD A DDGEGGAAANVVATAGRRHLLRGPGSWTSGIGSGSGPGGVRSPRLSRAGH XXXXXXXXX GSPSSSSNLVVTQEALGNLNNNLASLMSVKRQASTSENRESR+Q TEAAELGAAEEAEAVALGASP XXXXXXXXXXETIAAR RALE RRASRRSRGGDAPGGS ALREFQDESV+D+SPAARGXXXXXXX RLGSILPADTVLESE+ESYATPRGGR SSESV XXXXXXXXXXXXXXXXXXXX G ETSRG GG GFFGQQGSDPYRRK RYSTISTPN XXXXXXXXXRSGSDSDAAYDSLRGVLGKVSLSKYFKEFRRREVRLEDLQHLTEGDLTEMGMPVGPRKRLLVEVHG+ TPVRTPVA PMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KAAVRSPRQSYPGGART MFSP XXXXXXXXXXXXXXXXXXXX AEVT RR+ P A SAASLRARL G+ENQK+LPGRKSVS RPSLGSTRARASSEGMAAAAAVSGTDENG+E DGA HQA+P R+KAVSPRR SSFAPSAGGGDR +DHRATIGGSGLAA+RA
Sbjct: 939 ETSKLWVRVCYRGREDGWILTANKRGPTLVPSEDQDSAAGEFDAQEAAFASSSGGALPEDPADRPLTGAKPKPPSVAPTAATGDSEDRPLTGGGKDGWVPPSEFPPGQEDGSVGSGDGAXXXGAKPSPADVDDAREQANDSAGGAAVSSEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLKMSNLWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGEFDAQEAAFASSRGGALPEDPADRPLTGAKPKPPSVAPTAASGSEVGDGDERALTGGGKGAWVPPSEFPPGQEGGPVSSGDGGDALVKEASAGSVVDAARQGNDSAGDEAVSSEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSELWVRVCYRGREDGWVLTANKRGPTLVPSEDQDSAAGEFDAQEAAFASSSGGAVAEDPSDRPLTGAKPPPSAPTVATGDSEDRPLTGGGKGAWVPPSEFPPGEEDEPASSGGSGVVGDEAFSVKPSAGEGVDAGGQADGAAGGAAISPEYLTALGFVKVREEADPFSMDLGSVKKGDIVRVLETSKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQDSAAGEFDAQEAAFASSSGGALPEDPADRPLTGAKPKPPPAAPTAATGDSGDRPLTGGGKGAWVPPSEFPPGEEDGSVSYGGGGGSTGGVTPGPEDERSLRAAQKAEGGEGTASGGTVSGGDEVPVEYMKALGVIKLREEADPFSMDLGVIQKEHVVKVLEMKGLWARVAYRGNTDGWVLTENKRGKMLTAAEDQEEAEAAWAEQEQNAWQDDGNDNVPPASRDDRPIGGKRSTQHDGFDPGADSGRLETTGAASSPSGNGGGGVLDTWSQAAVGTDGGPAAPPSGGLKPWQRRRKVASSRKPAEVQGGAEHAEXXXXXPPAKPWQRRGAAKSDPLADGSEGAVTXXXXXXXXXXXKAGALPKDSTAEVGGEAGDSAAAADXXXXXXXXXXXXK----RPGGGVRVGAVD-GSSSGKPGGDDAVVAKPWEAAARAASETVEEAAVVPVGVERGAGEGVGGAGREDGLAGLEACFEERDWKKRVAVFEAASRACHSRVEGATATVGPLLPRMLQDKNVQAVDAAVETLTAYLSLRSNMGAEEGSSLASALAERALCCGRAPVEAKADAAAATLLAGAGGTGGLARRGAWLTLAARAGGLENEFFPPAGEEGGLGRSKVAAAAPKAVSGCVRAMSAGMGKGRTIVAGGGDSREEVYSAAKAMLGSSKLPVKMAGISLSSALYAAEGDVARDDLGVEGMEARIKSQLERAFADAXXXXX-----XXXXXXXXXXXXXPASPPIRPPATXXXXXXXXXXXXXXXXXAIYLLGDNDGNLELLTPPPPAPRVPEQRLAEPRGXXXXXXXXXXXXEGVAPLGGSEPAEAAKSGIPEPTVDDELWSEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDGLSADLPDLRITISPPEGDGSLAAPPRGAGEVGRAKARLGLAERLSSERGL-AAAGAAAETPRGFSTPGYRGSAKKRGVRTSVERETQFLGTQMLVLPEGERSAWDDILDDMLLKAPPADPLRWSQHRLSADGTPGIVGPGGGSAPHGARPDEEDALKLMXXXXXXXXXXXXXXXXXXXXXALLRPDSLRSVGDDDGVGSGSGRGSMGFEVGSDSDDRXXXXXXXXXXXXXXXXXXXXEAAPLSLPESFSASFGRGEEDGPVGTTAESRPSWNEQQQQR--QDMLAVRSSADESVRERMARLSARRRQSRQATAPRTGEEPLQKAPADSAMDDGEGGAAANVVATAGRRHLLRGPGSWTSGIGSGSGPGGVRSPRLSRAGHGXXXXXXXXXXXXXGSPSSSSNLVVTQEALGNLNNNLASLMSVKRQASTSENRESRKQSISRRLSRGASLGTFRATAVATEAAELGAAEEAEAVALGASPXXXXXXXXXXXXETIAARHRALEMRRASRRSRGGDAPGGSEGALREFQDESVVDLSPAARGXXXXXXX----RLGSILPADTVLESEEESYATPRGGRCSSESVXXXXXXXXXXXXXXXXXXXXX-GQETSRGHGGSGFFGQQGSDPYRRKGRYSTISTPNATXXXXXXXXXRSGSDSDAAYDSLRGVLGKVSLSKYFKEFRRREVRLEDLQHLTEGDLTEMGMPVGPRKRLLVEVHGITTPVRTPVAATPMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKAAVRSPRQSYPGGARTPMFSPPKRAXXXXXXXXXXXXXXXXXXXXXXAAEVTFRRTGPSAPSAASLRARLMGQENQKSLPGRKSVSSRPSLGSTRARASSEGMAAAAAVSGTDENGVERDGADHQAAPPLREKAVSPRRGSSFAPSAGGGDRLEDHRATIGGSGLAARRA 3343
BLAST of mRNA_Ecto-sp13_S_contig1180.1551.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI) HSP 1 Score: 1597 bits (4134), Expect = 0.000e+0 Identity = 1022/1293 (79.04%), Postives = 1054/1293 (81.52%), Query Frame = 1
Query: 28 QTSKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGEFDAQEAAFAASNGG---------------------------------------------------------------------QRGSAVDWRREGR-------VGTAERVPAG--RRRWTCSPWRRRRRSPSR--------RGALWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGKFDAQEAAFA---ASIDGFVPEDPADRPLTGAKPPPAAPAAASGSVAGDGDDRSLTGGGKGAWVPLSEFPPGEEDGPVRSGDGGDALVKKASAGGVVDAAGQGKNSAGDGAVSSEYMTALGFVKVREEADPFSMDLGSVKKGNIVKVMETFKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGEFDAQEAAFAANSGGALPEDPSDRPLTGAKPPPDAATAATGDSEDRPLTGGGKGAWVPPSEFPPGEEDGPVSSG-SCVVGDEAFSVKQSAGEGVDAGGQADGSAAGAPISREYLTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSKLWVRVCYRGRDDGWVLTANKRGPTLVPSEDQDSAVVEFDAQEAAFASSSGGTLPEDPSDRPLTGAKPKPPPAAPTAATGDSEDRPLTGGGKGAWVPPSEFPPGQEDGPVSYGGGGGSTGGVTPGPEDERPLRAAQKAEGGEGAASGGAMSEGDEVPVEYMKALGVIKLREEADPFSMDLGVVQKEHVVKVLEMKDLWARVAYRGKTDGWVLTENKRGKMLTAAEDREEAEAAWAEQEQNASQDDGNGNVPPASRDDRPIGGKRSTQHDGSDPGADNGGLETTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-AKPWQRRGATKSDPLADGTDEXXXXXXXXXXXXXKKTGALLKDSTAEVGGSAVDEXXXXXXXXXXXXXXXXXXXXXXRPGGGVRAGAVDDGSSSDKPGGDDAVVAKPWEAATRAASETVEEAAVAPEGVEREAGEGDHSTGGEDGLAGLKACLEERDWKKRVAEFEAASRACRSRVEGAAGTVGPLLPRMLQDKNVQAVDSAVDTLTAYLSLRSNMGAEEGSSLASALAERALCCGRAPVEAKADAAAXXXXXXXXXXGGLARRGAWLTLAARAGGLENEFFPPAGDEGGRGRSKVAAAAPKAVSGCVRAMSAGIGKGRTVVAGGGDSRKEVYSAAKAMLRSSKLPVKMAGISLSGALYAAEGDVARDDLGVEDMEARIKSQ 3633
+ SKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQ SAAGEFD QEAAFA+S+GG GS VD +G V + G + R P+ S R LWVRVCYR REDGWVLTANKRGPTLVPSEDQ SAAG+FDAQEAAFA A+ G VPEDP+DRPLTGAKPPPAAP AASGSVAGDGD+R+LTGGGKGAWVP SEFPPG+EDGPV SGDGGDALVKKASAG VVDAAGQG +SAGD AVSSEYMTALGFVKVREEADPFSMDLGSVKKG+IVKV+ET KLWVRVCYRGREDGWVLTANKRGPTLVP EDQASAAGEF QEAAFAA+SGGA+PEDPSDRPLTGAKP P A +AA G SEDRPLTGGGKGAWVPPSEFPP S VGD+AFSVK SAG GVDAGGQADGS G +S EYLTALGFVKVREEADPFSMDLGSV+KGDIVKVLETSKLWVRVCYRGR+DGWVLTANKRGPTLVPSEDQ SA EF QEAAFASSSGGTLPEDP+DRPLTGAKPKPPPAAPTAATGDSEDRPLTGGGKGAWVPPSEFPPGQEDGPVSYGGGGGSTGGVTPGPEDERPLRAAQKAEG EGAASGGA+S GDEVPVEYMKALGVIKLREEADPFSMDLGVVQKEHVVKVLEMKDLWARV YRGKTDGWVLTENKRGKMLTAAED+EEAEAAWAEQEQNASQDDGN NVPPASRDDRPIGGKRSTQ DG DPGAD+GGLETTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXX AKPWQRRGA KSDPLADGT XXXXXXXXXXXX KK GAL KDSTAEVGGSA XXXXXXXXXXXXXXXXXXXXXX AVVAKPWEA RAASETVEEAAV PEGV R AGEG S GGEDGLAGL+ACLEERDWKKRVA FEAAS ACRSRVEGAAG VGPLLPRMLQDKNVQAVD+AVDTLTAYLSLRS MGAEEGSSLASALAERALCCGRAPVEAKADAAA GGLARRGAWL LAARAGGLENEFFPP G+EGGRGRSKVAAAAPKAV+GCVRAMSAG+GKGRTVVAGGGDSRKEVYSAAKAML SSKLPVKMAGISLSGALYAAEGDVARDDLGVE MEARIKSQ
Sbjct: 1300 EASKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQDSAAGEFDKQEAAFASSSGGVVPEDPADRPLTGAKPPPAAPAAATGDSEDRPLTGGGKGAWVPPSEFPPGGEDGPVGGGDGGDALVKKASAGSVVDAAGQGNDSAGGATVSSEYMTALGFVKVREEADPFSMDLGSVKRGDIVKVLETSELWVRVCYRSREDGWVLTANKRGPTLVPSEDQDSAAGEFDAQEAAFANSAANDAGAVPEDPSDRPLTGAKPPPAAPTAASGSVAGDGDERALTGGGKGAWVPPSEFPPGQEDGPVSSGDGGDALVKKASAGSVVDAAGQGNDSAGDEAVSSEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSKLWVRVCYRGREDGWVLTANKRGPTLVPLEDQASAAGEFHKQEAAFAASSGGAVPEDPSDRPLTGAKPRPAAPSAAIGGSEDRPLTGGGKGAWVPPSEFPPXXXXXXXXXXXSGQVGDDAFSVKPSAGGGVDAGGQADGSVEGEAVSPEYLTALGFVKVREEADPFSMDLGSVRKGDIVKVLETSKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAREFHKQEAAFASSSGGTLPEDPADRPLTGAKPKPPPAAPTAATGDSEDRPLTGGGKGAWVPPSEFPPGQEDGPVSYGGGGGSTGGVTPGPEDERPLRAAQKAEGEEGAASGGAVSGGDEVPVEYMKALGVIKLREEADPFSMDLGVVQKEHVVKVLEMKDLWARVGYRGKTDGWVLTENKRGKMLTAAEDQEEAEAAWAEQEQNASQDDGNDNVPPASRDDRPIGGKRSTQLDGFDPGADSGGLETTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKPWQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPWQRRGAAKSDPLADGTXXXXXXXXXXXXXXTKKAGALPKDSTAEVGGSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVAKPWEADARAASETVEEAAVMPEGVGRGAGEGGVSAGGEDGLAGLEACLEERDWKKRVAVFEAASLACRSRVEGAAGKVGPLLPRMLQDKNVQAVDAAVDTLTAYLSLRSTMGAEEGSSLASALAERALCCGRAPVEAKADAAAATLLAGAGGSGGLARRGAWLALAARAGGLENEFFPPGGEEGGRGRSKVAAAAPKAVTGCVRAMSAGMGKGRTVVAGGGDSRKEVYSAAKAMLGSSKLPVKMAGISLSGALYAAEGDVARDDLGVEGMEARIKSQ 2592
BLAST of mRNA_Ecto-sp13_S_contig1180.1551.1 vs. uniprot
Match: A0A199V598_ANACO (SEC23-interacting protein n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199V598_ANACO) HSP 1 Score: 55.8 bits (133), Expect = 7.630e-5 Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 6139 SLRGVLGKVSLSKYFKEFRRREVRLEDLQHLTEGDLTEMGMPVGPRKRLLVEVH 6300
S+ G+L + L KY FR EV + L+HLT+ DL +G+P+GPRK++L+ V+
Sbjct: 103 SVEGLLKSLGLEKYLVTFRAEEVDMTALRHLTDEDLKSLGIPMGPRKKILLAVN 156
BLAST of mRNA_Ecto-sp13_S_contig1180.1551.1 vs. uniprot
Match: A0A2R6XP01_MARPO (SAM domain-containing protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XP01_MARPO) HSP 1 Score: 57.4 bits (137), Expect = 9.490e-5 Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 6136 DSLRGVLGKVSLSKYFKEFRRREVRLEDLQHLTEGDLTEMGMPVGPRKRLLVEVHG 6303
+S+ G+L + LSKY F+ EV + LQH+ + DL E+G+P+GPRK++L+ V G
Sbjct: 200 NSIAGLLQSLGLSKYLITFQAEEVDMAALQHMGDDDLKELGVPMGPRKKILLAVGG 255 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1180.1551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1180.1551.1 >prot_Ecto-sp13_S_contig1180.1551.1 ID=prot_Ecto-sp13_S_contig1180.1551.1|Name=mRNA_Ecto-sp13_S_contig1180.1551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=2320bp MSSAAASPRQTSKLWVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGEback to top mRNA from alignment at Ecto-sp13_S_contig1180:443..15378+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1180.1551.1 ID=mRNA_Ecto-sp13_S_contig1180.1551.1|Name=mRNA_Ecto-sp13_S_contig1180.1551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=14936bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1180:443..15378+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1180:443..15378+ >mRNA_Ecto-sp13_S_contig1180.1551.1 ID=mRNA_Ecto-sp13_S_contig1180.1551.1|Name=mRNA_Ecto-sp13_S_contig1180.1551.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=6960bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1180:443..15378+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |