mRNA_Ecto-sp13_S_contig11781.1528.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11781.1528.1
Unique NamemRNA_Ecto-sp13_S_contig11781.1528.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: A0A6H5JA04_9PHAE (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA04_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 1.010e-104
Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 1 
Query:    1 EVLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKLA 546
            EVLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVE+EGLTRSR+ARFNLVDLAGSERQKDTQ  GERLKEASNINKSLSTLGQVINALVEKS GRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKLA
Sbjct:  278 EVLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEEEGLTRSRIARFNLVDLAGSERQKDTQASGERLKEASNINKSLSTLGQVINALVEKSAGRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKLA 459
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: A0A836CCN8_9STRA (Kinesin motor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCN8_9STRA)

HSP 1 Score: 265 bits (678), Expect = 6.480e-79
Identity = 146/199 (73.37%), Postives = 162/199 (81.41%), Query Frame = 1 
Query:    4 VLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRFRHVHYRDSKLTFLLRDSLGGNSKTMLV------------------AALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKLA 546
            +L RG+RNRHVGETAMNRESSRSHAVFTLVI+A E   +EGLTR RVARFNLVDLAGSERQK TQ  G+RLKEAS+IN SLSTLGQVI+ALVEKS GR RHV YR+S+LTFLLRDSLGGNSKT+LV                  AA+SPA  NF ETLSTLKFAQRAKMIKN A+KNEDTSGSF+AL+ EV +LRQ+LA
Sbjct:  307 ILFRGYRNRHVGETAMNRESSRSHAVFTLVIEAREEALEEGLTRCRVARFNLVDLAGSERQKSTQTGGDRLKEASSINGSLSTLGQVISALVEKSAGRERHVAYRNSRLTFLLRDSLGGNSKTLLVNIIDSLDFXXXXXXXXXXAAVSPASINFAETLSTLKFAQRAKMIKNMAIKNEDTSGSFEALKAEVASLRQQLA 505
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: W7TV58_9STRA (Kinesin-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV58_9STRA)

HSP 1 Score: 244 bits (623), Expect = 2.770e-73
Identity = 130/181 (71.82%), Postives = 154/181 (85.08%), Query Frame = 1 
Query:    1 EVLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKL 543
            +VL RG+RNRHVGETAMNRESSRSHAVFT+V+++ EV   +G+TR+R A FNLVDLAGSERQ  T   GERLKEAS+INKSLS LG VINALV   +GR R+V YRDS+LTFLLRDSLGGN+KT LVA  SP D+NF ETLSTLKFAQRAKMIKN+AV NE+TSG+ +AL++++ TLRQ+L
Sbjct:  215 QVLTRGYRNRHVGETAMNRESSRSHAVFTVVLESREVDTMDGITRARCASFNLVDLAGSERQGQTGATGERLKEASSINKSLSALGNVINALV---SGRTRYVPYRDSRLTFLLRDSLGGNAKTFLVACTSPNDENFAETLSTLKFAQRAKMIKNKAVVNENTSGTVEALQKQLRTLRQEL 392
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: A0A4D9CPI7_9STRA (Kinesin motor domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPI7_9STRA)

HSP 1 Score: 244 bits (623), Expect = 1.440e-71
Identity = 130/181 (71.82%), Postives = 154/181 (85.08%), Query Frame = 1 
Query:    1 EVLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKL 543
            +VL RG+RNRHVGETAMNRESSRSHAVFT+V+++ EV   +G+TR+R A FNLVDLAGSERQ  T   GERLKEAS+INKSLS LG VINALV   +GR R+V YRDS+LTFLLRDSLGGN+KT LVA  SP D+NF ETLSTLKFAQRAKMIKN+AV NE+TSG+ +AL++++ TLRQ+L
Sbjct:  215 QVLTRGYRNRHVGETAMNRESSRSHAVFTVVLESREVDTVDGITRARCASFNLVDLAGSERQGQTGATGERLKEASSINKSLSALGNVINALV---SGRTRYVPYRDSRLTFLLRDSLGGNAKTFLVACTSPNDENFAETLSTLKFAQRAKMIKNKAVVNENTSGTVEALQKQLRTLRQEL 392
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: A0A813BPW3_9DINO (Kinesin-like protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BPW3_9DINO)

HSP 1 Score: 224 bits (571), Expect = 2.860e-68
Identity = 124/182 (68.13%), Postives = 143/182 (78.57%), Query Frame = 1 
Query:    4 VLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGR-FRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKLA 546
            ++ RG RNRH+G TAMNR SSRSH+VFTL I+  E  E  GLT++R ARFNL+DLAGSERQK T   G RL+EASNINKSLS LG VI AL   S+GR   HV YR+SKLTFLLRDSLGGNSKT LVA +SPA++ FGETLSTLKFA RAK++KNQAV NEDT+GSF  L+ EV  L+  LA
Sbjct:  200 LMKRGARNRHIGATAMNRHSSRSHSVFTLRIECRET-EASGLTKTRHARFNLIDLAGSERQKGTGAEGARLREASNINKSLSELGNVIQALAAVSSGRSVAHVPYRNSKLTFLLRDSLGGNSKTFLVATVSPAEEAFGETLSTLKFASRAKLVKNQAVVNEDTAGSFALLQAEVRRLQAALA 380
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: A0A4P9ZKM4_9FUNG (Kinesin-like protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZKM4_9FUNG)

HSP 1 Score: 214 bits (546), Expect = 4.550e-67
Identity = 116/181 (64.09%), Postives = 135/181 (74.59%), Query Frame = 1 
Query:    4 VLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKLA 546
            +  RG  NRHV  TAMNRESSRSH+V TL+IQ+     D  L   R +RFNLVDLAGSERQK     G+RLKEA+NINKSLS LG VINALVE + G+ RHVHYRDSKLTFLLRDSLGGNS T ++A  SPA  N  E+L TLKFAQRAKMIKN+A+ N+DT GS   L+ E+  LR ++A
Sbjct:   87 LFERGATNRHVSSTAMNRESSRSHSVLTLIIQSKSTTGD--LVDVRESRFNLVDLAGSERQKTAGTSGQRLKEAANINKSLSALGSVINALVEAANGKLRHVHYRDSKLTFLLRDSLGGNSITWIIANTSPATINAAESLGTLKFAQRAKMIKNKAIVNQDTQGSVAQLQAELKKLRMEIA 265
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: L1JBR1_GUITC (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBR1_GUITC)

HSP 1 Score: 216 bits (549), Expect = 5.520e-67
Identity = 110/161 (68.32%), Postives = 133/161 (82.61%), Query Frame = 1 
Query:    4 VLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNED 486
            +L RG RNRHVGET+MN+ESSRSH++FTL +++T +   EGLT+ R +  NLVDLAGSERQK T   G+RLKEASNINKSLS LG VI AL + S G+ RHVHYRDSKLTFLL+DSLGGNSKT ++  +SPAD NFGET+S+LKFAQRAK+IK +A+ NED
Sbjct:  150 LLQRGLRNRHVGETSMNKESSRSHSLFTLKVESTHLTA-EGLTKQRHSCLNLVDLAGSERQKATNASGDRLKEASNINKSLSALGNVIMALADISDGKARHVHYRDSKLTFLLKDSLGGNSKTAIITNISPADSNFGETISSLKFAQRAKLIKTRAILNED 309
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: A0A6G0XLG5_9STRA (Kinesin motor domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLG5_9STRA)

HSP 1 Score: 231 bits (589), Expect = 5.970e-67
Identity = 124/178 (69.66%), Postives = 141/178 (79.21%), Query Frame = 1 
Query:   16 GFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGS-FDALRREVTTLRQKLA 546
            G +NRHVGET+MNRESSRSH+VF L I +TE   D GL + R ARFNLVDLAGSERQK T+  GERLKEA NINKSLS LG VI AL E +TG+ RHVHYRDSKLT+LL+DSLGGNSKT ++AA+SPA+    ETLSTLKFAQRAKMIKN A  NEDT G  F  L+ E+  LRQ+LA
Sbjct:  177 GTQNRHVGETSMNRESSRSHSVFVLHIHSTETTSD-GLIKKRQARFNLVDLAGSERQKSTEAAGERLKEAGNINKSLSALGNVILALAESATGKSRHVHYRDSKLTYLLKDSLGGNSKTFMIAAISPAEDCLSETLSTLKFAQRAKMIKNNAFINEDTLGEDFTVLQEEIKRLRQQLA 353
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: A0A8K1CKA9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKA9_PYTOL)

HSP 1 Score: 226 bits (577), Expect = 2.460e-65
Identity = 119/181 (65.75%), Postives = 146/181 (80.66%), Query Frame = 1 
Query:    1 EVLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKL 543
            E++  G +NR VG+TAMNRESSRSH+VF L IQ+ E    EG+TR+R++RFNLVDLAGSERQK T+  G+RLKEA +INKSLS LG VI  LVE+S G+ RHVHYRDSKLTFLL+DSLGGNSKT ++A +SPA+ +  ETLSTLKFAQRAK+I+N AV NEDT GS   L+ E+  LR++L
Sbjct:  218 ELMAIGAQNRRVGQTAMNRESSRSHSVFILQIQSKETTS-EGITRTRMSRFNLVDLAGSERQKSTEAAGDRLKEAGSINKSLSALGNVIMGLVEQSAGKNRHVHYRDSKLTFLLKDSLGGNSKTFMIATVSPAEDSSHETLSTLKFAQRAKLIRNNAVINEDTMGSVLVLQEEILRLRRQL 397
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BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Match: K3WTM0_GLOUD (Kinesin-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTM0_GLOUD)

HSP 1 Score: 221 bits (564), Expect = 1.450e-64
Identity = 116/181 (64.09%), Postives = 146/181 (80.66%), Query Frame = 1 
Query:    1 EVLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVARFNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRFRHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRAKMIKNQAVKNEDTSGSFDALRREVTTLRQKL 543
            E++  G +NR VG+TAMNRESSRSH+VF L IQ+ E   D G+T+ R +RFNLVDLAGSERQ++T+  G+RLKEA +INKSLS LG VI  LVE+S G+ RHVHYRDSKLTFLL+DSLGGNSKT ++A +SPA+ +  ETLSTLKFAQRAK+I+N AV NED++GS   L+ E+  LR++L
Sbjct:  226 ELMTIGAQNRRVGQTAMNRESSRSHSVFILQIQSKETTPD-GITKMRSSRFNLVDLAGSERQRNTEAAGDRLKEAGSINKSLSALGNVIMGLVEQSAGKNRHVHYRDSKLTFLLKDSLGGNSKTFMIATVSPAEDSSYETLSTLKFAQRAKLIRNNAVINEDSTGSVLVLQEEIQRLRRQL 405
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11781.1528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA04_9PHAE1.010e-10497.25Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
A0A836CCN8_9STRA6.480e-7973.37Kinesin motor domain-containing protein n=1 Tax=Tr... [more]
W7TV58_9STRA2.770e-7371.82Kinesin-like protein n=1 Tax=Nannochloropsis gadit... [more]
A0A4D9CPI7_9STRA1.440e-7171.82Kinesin motor domain-containing protein n=1 Tax=Na... [more]
A0A813BPW3_9DINO2.860e-6868.13Kinesin-like protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A4P9ZKM4_9FUNG4.550e-6764.09Kinesin-like protein (Fragment) n=1 Tax=Dimargaris... [more]
L1JBR1_GUITC5.520e-6768.32Kinesin motor domain-containing protein (Fragment)... [more]
A0A6G0XLG5_9STRA5.970e-6769.66Kinesin motor domain-containing protein n=1 Tax=Ap... [more]
A0A8K1CKA9_PYTOL2.460e-6565.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WTM0_GLOUD1.450e-6464.09Kinesin-like protein n=1 Tax=Globisporangium ultim... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11781contigEcto-sp13_S_contig11781:1615..2477 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score340.1
Seed ortholog evalue6.3e-91
Seed eggNOG ortholog2880.D8LRJ7
Model size546
KEGG koko:K04543,ko:K04546,ko:K10400,ko:K10402,ko:K11498
KEGG Pathwayko04014,ko04062,ko04151,ko04371,ko04713,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04926,ko05032,ko05034,ko05167,ko05200,map04014,map04062,map04151,map04371,map04713,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04926,map05032,map05034,map05167,map05200
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0000278,GO:0000280,GO:0000281,GO:0000910,GO:0000911,GO:0001667,GO:0001700,GO:0002009,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0003007,GO:0003008,GO:0003013,GO:0003015,GO:0003365,GO:0003371,GO:0003379,GO:0003380,GO:0003674,GO:0003676,GO:0003677,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005834,GO:0005856,GO:0005871,GO:0005873,GO:0005875,GO:0005886,GO:0006810,GO:0006890,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007112,GO:0007140,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007186,GO:0007275,GO:0007276,GO:0007369,GO:0007391,GO:0007398,GO:0007399,GO:0007405,GO:0007498,GO:0007507,GO:0007584,GO:0007610,GO:0007635,GO:0007637,GO:0008104,GO:0008150,GO:0008283,GO:0008356,GO:0008574,GO:0009524,GO:0009555,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009898,GO:0009987,GO:0009991,GO:0010470,GO:0015630,GO:0016020,GO:0016043,GO:0016192,GO:0016331,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017145,GO:0019882,GO:0019884,GO:0019886,GO:0019897,GO:0019898,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022610,GO:0023052,GO:0030010,GO:0030154,GO:0030952,GO:0031234,GO:0031667,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033206,GO:0035050,GO:0035295,GO:0036445,GO:0040011,GO:0042074,GO:0042221,GO:0042623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043519,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045165,GO:0045176,GO:0045995,GO:0048002,GO:0048103,GO:0048193,GO:0048229,GO:0048232,GO:0048285,GO:0048383,GO:0048513,GO:0048568,GO:0048598,GO:0048609,GO:0048699,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051239,GO:0051301,GO:0051321,GO:0051493,GO:0051674,GO:0051704,GO:0051716,GO:0051780,GO:0055046,GO:0055057,GO:0055059,GO:0060004,GO:0060026,GO:0060027,GO:0060429,GO:0061343,GO:0061351,GO:0061640,GO:0065007,GO:0071840,GO:0071944,GO:0072089,GO:0072359,GO:0080175,GO:0097159,GO:0098552,GO:0098562,GO:0098722,GO:0098796,GO:0098797,GO:0140013,GO:1901363,GO:1902410,GO:1902494,GO:1903046,GO:1903047,GO:1905360,GO:1990939,GO:2000026
Exons2
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG4280@2759
Ec32 ortholog descriptionKinesin like-protein
Ec32 orthologEc-12_000040.1
Cds size546
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036,ko04031,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462620.678578-CDS-Ecto-sp13_S_contig11781:1614..18171681462620.678578-CDS-Ecto-sp13_S_contig11781:1614..1817Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11781 1615..1817 +
1681462620.7027938-CDS-Ecto-sp13_S_contig11781:2134..24771681462620.7027938-CDS-Ecto-sp13_S_contig11781:2134..2477Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11781 2135..2477 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11781.1528.1prot_Ecto-sp13_S_contig11781.1528.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11781 1615..2477 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11781.1528.1

>prot_Ecto-sp13_S_contig11781.1528.1 ID=prot_Ecto-sp13_S_contig11781.1528.1|Name=mRNA_Ecto-sp13_S_contig11781.1528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
EVLHRGFRNRHVGETAMNRESSRSHAVFTLVIQATEVVEDEGLTRSRVAR
FNLVDLAGSERQKDTQVLGERLKEASNINKSLSTLGQVINALVEKSTGRF
RHVHYRDSKLTFLLRDSLGGNSKTMLVAALSPADQNFGETLSTLKFAQRA
KMIKNQAVKNEDTSGSFDALRREVTTLRQKLA
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mRNA from alignment at Ecto-sp13_S_contig11781:1615..2477+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11781.1528.1 ID=mRNA_Ecto-sp13_S_contig11781.1528.1|Name=mRNA_Ecto-sp13_S_contig11781.1528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=863bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11781:1615..2477+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGTTCTCCACAGGGGCTTCCGAAACCGGCATGTCGGGGAGACCGCCAT
GAACCGCGAGTCGTCGCGGTCCCACGCCGTGTTCACCCTGGTGATTCAGG
CCACGGAGGTAGTGGAGGATGAAGGACTGACTCGGTCTAGAGTTGCTCGG
TTCAACCTCGTCGACCTTGCTGGCTCCGAACGGCAGAAGGACACCCAGGT
GCTGTATTGTACGGCCGACCGAGGTCAATTTTGTTCTTTGTTTCGAAGTA
TGATAGGATTGCGCGTTCCTTGCGCTGCTTGTTGTTGATTACCTCGGCGT
AGGGCTGCCTGCAGTCCTTCCTTCCTCCTTTTTGACCCCCAACGTACATG
AACTTGCGTATGGTCACCTCCCTGTCGACCCTTGCTGAACGACGGACTTC
ACCTTATTTCTGTCCCTGTTCCATGTCTCCCTTGTACTGTTGCCACTCTA
CCTCATTTGGCATCTCCATCTCTGTCTCTGTCTCCCACGATGCACGCGGT
ACTGCTGTACGGCAGGCAAGTGGAGAGCGACTCAAAGAGGCGTCGAACAT
CAACAAGTCCCTGTCCACCCTAGGCCAGGTGATCAACGCCCTCGTTGAAA
AATCTACGGGCCGATTCCGCCACGTGCACTACCGCGACTCCAAGCTCACT
TTCCTGCTGCGGGACTCTCTGGGCGGAAACTCGAAGACCATGCTCGTGGC
CGCCCTGTCCCCCGCCGACCAGAACTTCGGAGAAACCCTGTCCACGCTCA
AATTCGCCCAGAGGGCCAAGATGATAAAAAACCAGGCGGTCAAGAACGAG
GACACTTCGGGCAGCTTCGACGCCCTCAGGAGAGAGGTGACGACCCTTCG
CCAGAAGCTCGCT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11781:1615..2477+

>mRNA_Ecto-sp13_S_contig11781.1528.1 ID=mRNA_Ecto-sp13_S_contig11781.1528.1|Name=mRNA_Ecto-sp13_S_contig11781.1528.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11781:1615..2477+ (Ectocarpus species13 EcNAP12_S_4_19m)
GAGGTTCTCCACAGGGGCTTCCGAAACCGGCATGTCGGGGAGACCGCCAT
GAACCGCGAGTCGTCGCGGTCCCACGCCGTGTTCACCCTGGTGATTCAGG
CCACGGAGGTAGTGGAGGATGAAGGACTGACTCGGTCTAGAGTTGCTCGG
TTCAACCTCGTCGACCTTGCTGGCTCCGAACGGCAGAAGGACACCCAGGT
GCTTGGAGAGCGACTCAAAGAGGCGTCGAACATCAACAAGTCCCTGTCCA
CCCTAGGCCAGGTGATCAACGCCCTCGTTGAAAAATCTACGGGCCGATTC
CGCCACGTGCACTACCGCGACTCCAAGCTCACTTTCCTGCTGCGGGACTC
TCTGGGCGGAAACTCGAAGACCATGCTCGTGGCCGCCCTGTCCCCCGCCG
ACCAGAACTTCGGAGAAACCCTGTCCACGCTCAAATTCGCCCAGAGGGCC
AAGATGATAAAAAACCAGGCGGTCAAGAACGAGGACACTTCGGGCAGCTT
CGACGCCCTCAGGAGAGAGGTGACGACCCTTCGCCAGAAGCTCGCT
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