mRNA_Ecto-sp13_S_contig11763.1516.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: D8LNX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX0_ECTSI) HSP 1 Score: 347 bits (889), Expect = 3.210e-118 Identity = 179/209 (85.65%), Postives = 183/209 (87.56%), Query Frame = 1
Query: 1 MSQQQQQPQLRGQGREASSAVLGASARKDNVFAFDFDGAPPVATSKTAFPPKGAGQLINATWLVLSSIVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVGREELVDAFGSARDEWMEADFQGWLWANKFYEGIPEAISACTGEVYVITTKQTRFASALLEHAG 627
MSQQQQ PQL GQGRE SS VLG SAR DNVFAFDFDG PPVATSKTAFPP GAGQLI+ATW VLSSI+DKMKELRPIVETGYENILLVRLLIEE Q ST SS +PRLGLPVLYPSEGLFDSWG EARDALALRY + REELVDAFGSARDEWMEADFQGWL ANKFYEGIPEAISAC GEVYVITTKQTRFASALLEHAG
Sbjct: 1 MSQQQQHPQLHGQGREGSSTVLGTSARNDNVFAFDFDGTPPVATSKTAFPPVGAGQLIDATWHVLSSILDKMKELRPIVETGYENILLVRLLIEESRKSRGEQRLSTKSSSTMPRLGLPVLYPSEGLFDSWGPEARDALALRYDLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALLEHAG 209
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: A0A6H5KET7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KET7_9PHAE) HSP 1 Score: 276 bits (705), Expect = 2.540e-90 Identity = 153/227 (67.40%), Postives = 162/227 (71.37%), Query Frame = 1
Query: 1 MSQQQQQPQLRGQGREASSAVLGASARKDNVFAFDFDGAPPVATSKTAFPPKGAGQLINATWLVLSS------------------IVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVGREELVDAFGSARDEWMEADFQGWLWANKFYEGIPEAISACTGEVYVITTKQTRFASALLEHAG 627
MSQQQQ PQL GQGREASS VLGASAR DNVFAFDFDG V + + + + W +++ I+DKMKELRPIVETGYENILLVRLLIEE RLGLPVLYPSEGL DSWG EARDALALRYG+GREELVDAFGSARDEWME DFQGWL ANKFYEGIPEAISACTGEVYVITTKQTRFASALLEHAG
Sbjct: 1 MSQQQQHPQLGGQGREASSTVLGASARNDNVFAFDFDG---VICNSQGESSRSGFRALRVLWPEIAAELRTKDGGQKDSDDAPAWILDKMKELRPIVETGYENILLVRLLIEE-------------------RLGLPVLYPSEGLLDSWGPEARDALALRYGLGREELVDAFGSARDEWMEVDFQGWLGANKFYEGIPEAISACTGEVYVITTKQTRFASALLEHAG 205
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: A0A835YJR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJR6_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.240e-31 Identity = 70/144 (48.61%), Postives = 89/144 (61.81%), Query Frame = 1
Query: 202 IVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVGREELVDAFGSARDEWMEADFQGWLWANKFYE--GIPEAISACTGEVYVITTKQTRFASALLEHAG 627
++DKM++LRP+VETGYENILL RLL+EE +SG G L E + +WG E +D L +YG ++ELV AFG RDEW+ D + WL AN FYE G+ +A VY+ITTKQTRFA ALL+HAG
Sbjct: 62 LMDKMRKLRPVVETGYENILLTRLLLEEYRMAE---------TSGK-ETGTRPLTVGE-IAANWGEELKDTLMRKYGYTQDELVHAFGDTRDEWIARDEESWLEANSFYERLGVRDAARYSKANVYIITTKQTRFAEALLKHAG 194
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: UPI0007AF26AF (uncharacterized protein LOC107638079 n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI0007AF26AF) HSP 1 Score: 116 bits (290), Expect = 4.960e-29 Identity = 61/143 (42.66%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 202 IVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVGREELVDAFGSARDEWMEADFQGWLWANKFYEGIPEAISACTGEVYVITTKQTRFASALL-EHAG 627
IVD+M +RP+VETGYEN+LLVRLL+E P ++++ G+ EG+ ++W S+ + + + RE L+D FG RDEW+E DF W+ AN+FY G+ +A+ + VY++TTKQ+RFA ALL E AG
Sbjct: 47 IVDQMHSVRPVVETGYENVLLVRLLLET----RIPSIRKSSVAEGL---------TVEGILENW-SKLKPVIMEEWSENRETLIDLFGKVRDEWLEQDFATWIGANRFYPGVSDALKFASSRVYIVTTKQSRFADALLREIAG 175
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: A0A067H5P9_CITSI (Uncharacterized protein n=4 Tax=Citrus TaxID=2706 RepID=A0A067H5P9_CITSI) HSP 1 Score: 116 bits (291), Expect = 5.340e-29 Identity = 72/191 (37.70%), Postives = 104/191 (54.45%), Query Frame = 1
Query: 88 NVFAFDFDGA----------PPVATSKTAFPPKGAGQLINATWLVLSSIVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVGREELVDAFGSARDEWMEADFQGWLWANKFYEGIPEAISACTGEVYVITTKQTRFASALL-EHAG 627
+++A DFDG V +K +P G ++ IVD+M LRP+VETGYEN+LLVRLL+E P +++S G+ EG+ ++W S+ + + R+ LVD FG RDEWM+ D W+ AN+FY GIP+A+ + +Y++TTKQ+RFA ALL E AG
Sbjct: 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWP----GLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEI----RMPSIRKSSVSEGL---------TVEGILENW-SKIKPVIMXXXXXXRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAG 175
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: A0A251V267_HELAN (Uncharacterized protein n=7 Tax=Asteraceae TaxID=4210 RepID=A0A251V267_HELAN) HSP 1 Score: 117 bits (293), Expect = 1.140e-28 Identity = 70/187 (37.43%), Postives = 109/187 (58.29%), Query Frame = 1
Query: 88 NVFAFDFDGAPPVATSKTAFPP-KGAGQLINATWLVLSS-----IVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVGREELVDAFGSARDEWMEADFQGWLWANKFYEGIPEAISACTGEVYVITTKQTRFASALL-EHAG 627
+++A DFDG + +++ K A Q + + S IVD+M +RP+VETGYEN+LLVRLL+E P +++++ G+ EG+ ++W ++ + + + REELVD FG RD+WME D W+ AN+FY G+P+A+ + ++Y++TTKQ RFA ALL E AG
Sbjct: 3 DLYALDFDGVLCDSCGESSISAVKAAKQKWPQLFTTVDSSIEDWIVDQMHTVRPVVETGYENLLLVRLLLEI----KIPSLQTSSVAKGL---------TIEGILENW-ADIKPVIMKEWSENREELVDLFGKVRDDWMEKDLATWIGANRFYPGVPDALRFASSQLYIVTTKQGRFADALLRELAG 175
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: B7FKG7_MEDTR (Putative HAD-like domain-containing protein n=8 Tax=NPAAA clade TaxID=2231382 RepID=B7FKG7_MEDTR) HSP 1 Score: 117 bits (292), Expect = 1.600e-28 Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 1
Query: 91 VFAFDFDGAPPVATSKTAFPPKGAGQLINATWLVLSS---------IVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVGREELVDAFGSARDEWMEADFQGWLWANKFYEGIPEAISACTGEVYVITTKQTRFASALL-EHAG 627
++A DFDG V A + W VL IVD+M +RP+VETGYEN+LLVRLL+E P ++++ G+ EG+ +SW S + + +G RE L+D FG RDEW+E DF W+ AN+ Y G+ +A+ + +V+++TTKQ+RFA ALL E AG
Sbjct: 4 LYALDFDG---VICDSCGESSLSALKAAKVRWPVLFDGVDSTIEDWIVDQMHTVRPVVETGYENLLLVRLLLET----RTPSIRKSSVAEGL---------AVEGILESW-STLKPIIMEEWGENREALIDLFGKVRDEWLEQDFAAWIGANRIYPGVSDALKFASSKVFIVTTKQSRFADALLRELAG 175
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: A0A1D1Y054_9ARAE (Gamma-glutamyl phosphate reductase n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y054_9ARAE) HSP 1 Score: 117 bits (292), Expect = 1.630e-28 Identity = 72/190 (37.89%), Postives = 106/190 (55.79%), Query Frame = 1
Query: 88 NVFAFDFDGAPPVATSKTAFPPKGAGQLINATWLVLSS---------IVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVGREELVDAFGSARDEWMEADFQGWLWANKFYEGIPEAISACTGEVYVITTKQTRFASALL-EHAG 627
+++A DFDG + +++ A ++ W L S I+D+M LRP+VETGYEN+LLVRLL+E P +++S+G+ EG+ +SW E + + + R+ LVD FG RDEW+E D GW+ AN+FY G+ EA+ + +YV+TTKQ+RFA LL E AG
Sbjct: 4 DLYALDFDGVLCDSCGESSISALKAAKI---RWPALFSQVDAGMEEWIIDQMHILRPVVETGYENLLLVRLLLEI----QMPSIQKSSVSAGV---------TIEGILESW-PELKPVIMEEWHEERDSLVDLFGRVRDEWIEKDLSGWIGANRFYPGVAEALKFSSSRIYVVTTKQSRFADVLLRELAG 176
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: UPI0012632B3A (uncharacterized protein LOC116134267 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI0012632B3A) HSP 1 Score: 117 bits (292), Expect = 1.630e-28 Identity = 67/188 (35.64%), Postives = 107/188 (56.91%), Query Frame = 1
Query: 88 NVFAFDFDGA----------PPVATSKTAFPPKGAGQLINATWLVLSSIVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVG-REELVDAFGSARDEWMEADFQGWLWANKFYEGIPEAISACTGEVYVITTKQTRFASALLE 618
+++A DFDG V +K +P G A + IVD+M ++RP+VETGYEN+LLVRLL+E P ++++ G+ EG+ ++W S+ + + +G R++L+D FG RDEWM+ D + W+ AN+FY G+P+A+ + +Y++TTKQ+RFA ALL+
Sbjct: 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWP----GLFDGADSAMEDWIVDQMYKVRPVVETGYENLLLVRLLLET----RLPSIRKSSVAEGL---------TVEGILENW-SKLKPVIMEEWGENSRDDLIDLFGKVRDEWMDTDLETWIGANRFYPGVPDALKFASSRIYIVTTKQSRFADALLQ 172
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Match: A0A067H5P8_CITSI (Uncharacterized protein n=5 Tax=Citrus TaxID=2706 RepID=A0A067H5P8_CITSI) HSP 1 Score: 116 bits (291), Expect = 2.240e-28 Identity = 72/191 (37.70%), Postives = 104/191 (54.45%), Query Frame = 1
Query: 88 NVFAFDFDGA----------PPVATSKTAFPPKGAGQLINATWLVLSSIVDKMKELRPIVETGYENILLVRLLIEEVGWGPHPQPCSTTISSGIPRLGLPVLYPSEGLFDSWGSEARDALALRYGVGREELVDAFGSARDEWMEADFQGWLWANKFYEGIPEAISACTGEVYVITTKQTRFASALL-EHAG 627
+++A DFDG V +K +P G ++ IVD+M LRP+VETGYEN+LLVRLL+E P +++S G+ EG+ ++W S+ + + R+ LVD FG RDEWM+ D W+ AN+FY GIP+A+ + +Y++TTKQ+RFA ALL E AG
Sbjct: 3 DLYALDFDGVLCDSCGESSLSAVKAAKVRWP----GLFDGVDSVIEDWIVDQMHILRPVVETGYENLLLVRLLLEI----RMPSIRKSSVSEGL---------TVEGILENW-SKIKPVIMXXXXXXRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAG 175 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11763.1516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11763.1516.1 >prot_Ecto-sp13_S_contig11763.1516.1 ID=prot_Ecto-sp13_S_contig11763.1516.1|Name=mRNA_Ecto-sp13_S_contig11763.1516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp MSQQQQQPQLRGQGREASSAVLGASARKDNVFAFDFDGAPPVATSKTAFPback to top mRNA from alignment at Ecto-sp13_S_contig11763:91..3566- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11763.1516.1 ID=mRNA_Ecto-sp13_S_contig11763.1516.1|Name=mRNA_Ecto-sp13_S_contig11763.1516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3476bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11763:91..3566- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11763:91..3566- >mRNA_Ecto-sp13_S_contig11763.1516.1 ID=mRNA_Ecto-sp13_S_contig11763.1516.1|Name=mRNA_Ecto-sp13_S_contig11763.1516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=627bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11763:91..3566- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |