mRNA_Ecto-sp13_S_contig11761.1513.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11761.1513.1
Unique NamemRNA_Ecto-sp13_S_contig11761.1513.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 566 bits (1460), Expect = 1.350e-192
Identity = 313/422 (74.17%), Postives = 327/422 (77.49%), Query Frame = 1
Query:   28 MVHAIRPSARIPEKKDCVTTMRTVKKSMMEKVSRLIEGEHVCITSDVWTSCANDTYMSLTLTLITSAWKLVTLS-----SEGTTTGDALAAGVKAAVAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATVCTHIGCCNHRLESTTSIVFNGPGINKVMAMARGLVSRYTTSSQAADRLKQFVKTYLGVDNKRVIQDVVTRWWSTSSMAARLIELEVPIKMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIYDLRTSLEDAVEDLAELPPDSDANVNTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPEAAAGPTSSPTSAGAEESSRKRPRRG 1278
            MVHAIRPSAR+PEKKDCVTTMRTVKK MMEKVSRLIEGE VCITSD WTSCANDTYMSLT TLITSAWKLVTLS     SEGTTTGDALAAG+KA VAKHGLTGKVTAVTTDCEPSMVKMGRLL GDATV T IGCCN+RLEST+SIVFNGP + KVM +ARGLV+RY TSSQAADRLKQFVKTYLGVDNKRVIQDVVT                                                                GSLVVPFIYDLR SLEDA++DL ELPPDSDANVNTA AA MPCIKALRDD+I+RWGDG NILIYKEG R QPGGFKPV VLATAL+PRTKI YGVDEDEKADVWKLV+EEAVKIAVETRN+ENSQR SSQQGPEAAAGP  S TSAGAEESSRKRPR G
Sbjct:    1 MVHAIRPSARVPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT----------------------------------------------------------------GSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTSSQQGPEAAAGPALSSTSAGAEESSRKRPRVG 358          
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 372 bits (955), Expect = 4.510e-120
Identity = 225/518 (43.44%), Postives = 304/518 (58.69%), Query Frame = 1
Query:   19 FKAMVHAIRPSARIPEKKDCVTTMRTVKKSMMEKVSRLIEGEHVCITSDVWTSCANDTYMSLTLTLITSAWKLVTLSSE-----GTTTGDALAAGVKAAVAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATVCTHIGCCNHRLESTTSIVFNGPGINKVMAMARGLVSRYTTSSQAADRLKQFVKTYLGVDNKRVIQDVVTRWWSTSSMAARLIELEVPIKMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIYDLRTSLEDAVEDLAELPPDS-DANVNTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPEAAAGPTSSP--------------------------TSAGAEESSRKRPRR---------------GIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERL 1431
            F A+V  +   AR P ++  V  MR +KK++  +V+ +++ E+V IT+D WTS +N++YMSLT+  I   W+L  LS       G+T G+ LA  + + + +HGLTG+VTA  TDCEPSMVK GRLLE   +   HIGC NHR+ESTTS VFNG  +   +A AR +V RY  SSQ + RL  F+   L +    V+QDV TRWWS+ +M  RL+ L   IK+HE+ D + P+LS  DW VL++I P+L PF   Q  LEG KYVTGS+ VP I +LR  LE A+ DL         A+   A  A +P  +AL +DF+NRWGDG +IL Y+EG+R QP GFK  QV ATA++PR K +YG+ + E A VW+ V  +AV IA E  +S+N+  + S    +    P  +P                          +SAG +    KR +                GI ++    +G KVY DPLDWWR R  +FPHLA LARRVLAIP++QA SER+
Sbjct:   34 FHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGI-LKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.780e-118
Identity = 234/553 (42.31%), Postives = 311/553 (56.24%), Query Frame = 1
Query:   28 MVHAIRPSARIPEKKDCVTTMRTVKKSMMEKVSRLIEGEHVCITSDVWTSCANDTYMSLTLTLITSAWKLVTLSSE-----GTTTGDALAAGVKAAVAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATVCTHIGCCNHRLESTTSIVFNGPGINKVMAMARGLVSRYTTSSQAADRLKQFVKTYLGVDNKRVIQDVVTRWWSTSSMAARLIELEVPIKMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIYDLRTSLEDAVEDLAELPPDS-DANVNTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPEAAAGPTSSPTSA-----GAEESSRKRPRR---------------------------------------------GIKMYEEDKEGA---KVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 1509
            MV A+   A++P +++ ++ MR VK ++  +V+ +++ E V IT+D WTS  N++YMSLT+  I   WKL  LS +     GTTTG+ LAA V   V +H LTG+V A  TDCEPSM+K GRLLE D +  +HIGC NHR+ESTTS VFNG  +   + +AR LV RY  SSQ A RL Q     L ++   V+QDV TRWWST +M  RL+ L   IK+HE+ D++ PLLS  DW VL++I P+L PF   Q  LEG +YVTGS+ +  + +LR  LE A+ DL  +           A  A  P  +AL  DF NRWGDG NIL Y+EG+R QP GFK  QV ATAL+PR K +YG+ + E A VW+ V   AV IA+     + +        P +A  P S P        G  + + KRPR                                              GI++++  K      KV+ +PLD WR +  ++P LA LARRVLAIP++QA+SER+FS AG  VT  R+ L    VELLV L
Sbjct:    1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGI-LQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKA--------PASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543          
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 350 bits (898), Expect = 2.600e-107
Identity = 226/540 (41.85%), Postives = 294/540 (54.44%), Query Frame = 1
Query:  139 GEHVCITSDVWTSCANDTYMSLTLTLITSAWKLVTLSSE-----GTTTGDALAAGVKAAVAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATVCTHIGCCNHRLESTTSIVFNGPGINKVMAMARGLVSRYTTSSQAADRLKQFVKTYLGVDNKRVIQDVVTRWWSTSSMAARLIELEVPIKMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIYDLRTSLEDAVEDLAELPPDSDANVNTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPEA-----------------------------------AAGPTSSPT------------------------------SAGAEESSRKRPRRGIKMYEED-------------KEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 1509
            GEHV +TSD WT  +NDTYMS T T I+S + LV L  E       T G+ L   VKA +A++GLTG+  A+TTDCE SMVK GRLLE +  V TH+GC  HRLES TS  F GPG++K +A+ARG+V+RYT SSQA+DRL+Q V   + V+ K V+QDV TRWWST     RLI L  PI  HE  D   PLL   DW VL+++  +L+PF   Q  LE  K VT  LV P+I DL+  L++AVE L      +++ V  A+   + C +AL+ D   RWGD  ++L+Y EG R QP GFK  QVLATAL PR+K +YG++E E +DVW     EAVK+A+E + +E+                                               +AG +SSP                               SA A  S  +R    I   E D             ++G +V   PL+WWRV+  ++P LA+LARRVL IPA QA+SER+FS AG +VTK R  + P  V L+V L
Sbjct:    3 GEHVALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGV-THLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQ-VCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540          
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 9.450e-101
Identity = 208/513 (40.55%), Postives = 293/513 (57.12%), Query Frame = 1
Query:    1 MLADKSFKAMVHAIRPSARIPEKKDCVTTMRTVKKSMMEKVSRLIEGEHVCITSDVWTSCANDTYMSLTLTLITSAWKLVTLSSE-----GTTTGDALAAGVKAAVAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATVCTHIGCCNHRLESTTSIVFNGPGINKVMAMARGLVSRYTTSSQAADRLKQFVKTYLGVDNKRVIQDVVTRWWSTSSMAARLIELEVPIKMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIYDLRTSLEDAVEDLAELPPDSDANVNTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPEAAAGPTSSPTSAGAEESSRKRPRRGIKMYEEDKEGAKVYLDPLDWWRVRCA--DFPHLANLAR---RVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 1509
            M+ ++ F  MV  ++  A +P K+  +  +R +KK + ++V   + GEHV +TSD WTS +NDTYM  T T I+S + LV L  E     G TTG+ L   VKA +A++GLT +  A TTDCEPSMVK GRLLE +  V TH+GC  HRLES TS  F GPG++K +A+AR +V+RY  SSQA+DRL+Q ++  + V+ K+V+QDV TRWWST +   RL+ L  PI  HE  D + PLL   DW VL+++ P+ +PF  +Q   E  K VT SLV+P+I DLR  L++AVE L      +++ V  A+       K +R           ++++       +P GFK  QVLATAL+PR+K +YG++E E +DVW+ V  EAVK+A+E + +E++Q                   SAGA  S        +   E             D+        D    AN +    RVL IPA+Q +SER+FS AG +VTK R  + P  VEL++ L
Sbjct:    1 MVENEHFIEMVRFLKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGV-THLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQ-MRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAESIVAEAKKDVFFAPKHVRPT---------SVIV-------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQ-------------------SAGASSS--------LIPVEPAAXXXXXXXXXXDFAAASAVPGDKQQSANASSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468          
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 2.480e-92
Identity = 164/238 (68.91%), Postives = 173/238 (72.69%), Query Frame = 1
Query:  937 ALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGP----------------------------------EAAAGPTSSPTSAGAEESSRK-------------RPRRGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 1509
            + + DFINRWGDGRNILIYKEGRR QPGGFKPVQVLATAL+PRTKI+YGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGP                                  +A  G  +     GA+ S  +             +   GIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL
Sbjct:   46 STQPDFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283          
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.050e-87
Identity = 160/347 (46.11%), Postives = 218/347 (62.82%), Query Frame = 1
Query:  175 SCANDTYMSLTLTLITSAWKLVTLSSE-----GTTTGDALAAGVKAAVAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATVCTHIGCCNHRLESTTSIVFNGPGINKVMAMARGLVSRYTTSSQAADRLKQFVKTYLGVDNKRVIQDVVTRWWSTSSMAARLIELEVPIKMHEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIYDLRTSLEDAVEDLAELPPDSDANVNTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGP 1200
            S +NDTYM+ T T I+S + LV L  E     G TTG+ L   VKA +A++GLTG+  A TTDCEP MVK GRLLE +  V +H+GC  HR ES TS  F GPG++K +A+ RG+V+RYT SSQA++RL+Q     + V+ K+V+QDV TRWWST                    D + PLL+  DW VL+++ P+L PF   Q  LE  K VT SLV  +I DLR  L++A+E L      +++ V  A+   + C  AL+ D   RW DG ++L+Y EG R QP GFK  QVLATAL+PR+K +YG++E E +DVW+ V  EAVK+A+E + +E++Q A +   P
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGV-SHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDI-VQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSP 331          
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 2.020e-57
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 1
Query:  862 DLAELPPDSDANVNTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLV-EEEAVKIAVETRNSENSQRASSQQGPE 1203
            DLAELPPDSDANVNTARAA MPCIKALRDDFINRWGDGRNIL YKEG R QP GFKPVQVLATAL+PRTKI++GVDEDEKADVWKLV EEEAVKIAVETRN+ENSQR SSQQGPE
Sbjct:  143 DLAELPPDSDANVNTARAAVMPCIKALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVETRNAENSQRTSSQQGPE 257          
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: A0A669CH32_ORENI (BED-type domain-containing protein n=4 Tax=Ovalentaria TaxID=1489908 RepID=A0A669CH32_ORENI)

HSP 1 Score: 160 bits (405), Expect = 4.090e-39
Identity = 151/531 (28.44%), Postives = 238/531 (44.82%), Query Frame = 1
Query:   19 FKAMVHAIRPSARIPEKKDCVTTMRTVKKSMMEKVSRLIEG--EHVCITSDVWTSCANDTYMSLTLTLITSAWKLV-----TLSSEGTTTGDALAAGVKAAVAK-HGLTGKVTAVTTDCEPSMVKMGRLLEGDATVCTHIGCCNHRLESTTSIVFNGPGINKVMAMARGLVSRYTTSSQAADRLKQFVKTYLGVDNKRVIQDVVTRWWSTSSMAARLIELEVPIKM--------HEAADKLDPLLSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIYDLRTSLEDAVEDLAELPPDSDANVNTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPEAAAGPTSSP---------TSAGAEESSRKRPRRGIKMYEEDKEGAKVYL---------DPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 1509
            FK M+   +P   +P ++   + M T  ++ +EK+   ++     + +T+D WTS   ++Y+ +T   I   W L+     TL  E   T + LAA V+    K H     V A+  D   ++V    +L+    V ++  C  H L+   +     P I+K ++ ARGLV     S  A+ +LKQ  K  +G    ++IQDV  RW S+  M  RL+E   P+                LD  L    W +L  +  VL+P+     +L G+ YVT S++ P +  L  S ++   D A         VN+ +  A        ++ ++RW          E   +Q  G K V ++A AL+PR + +  +  ++   +   V+ EA+ +  E R+    Q      G EA+A P +           T +  E+ +    + G    E  ++   +Y          DPL WW+     FP LANLA+  LA+PAT   SERLFS AGNIVTK R +L    VE+L  L
Sbjct:  125 FKEMLTTFQPGYTLPSRRHFTSMMETKYETSVEKLRNELKKATSKISLTTDAWTSLVTESYLGVTCHFINDNWDLLSFNLATLPVEERHTAENLAAWVEKVAEKFHISLHNVLAIVHDNASNIVAALHILKEKFGVVSY-RCAGHTLQLVVNHALKDPKIDKALSAARGLVKHIRKSEPASTKLKQKQKQ-MGTAEHKLIQDVAVRWNSSYYMIERLLEQRWPVVATLSDPEVTQRGKQYLD--LKNDQWILLDELKEVLKPYEQATNVLSGQSYVTVSVLPPLLKGLLKSTQNKSFDSAA--------VNSFQNCA-------EEEILSRW--------QPEVSAFQADG-KNVSLIAAALDPRFRKLKFLSPEDALKLQVRVQREALDLKREQRSQLQQQHV----GQEASASPPTKKRSVLDTLLGTDSEEEDCNENTDQGGDGENEAVRKEVLLYFGEAPIPRDNDPLTWWKNNATRFPTLANLAKSYLAVPATSTPSERLFSVAGNIVTKKRASLTAEHVEMLTFL 623          
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Match: A0A671UN90_SPAAU (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sparus aurata TaxID=8175 RepID=A0A671UN90_SPAAU)

HSP 1 Score: 155 bits (392), Expect = 8.500e-38
Identity = 151/534 (28.28%), Postives = 239/534 (44.76%), Query Frame = 1
Query:    1 MLADKSFKAMVHAIRPSARIPEKKDCVTTMRTVKKSMMEKVSRLIE--GEHVCITSDVWTSCANDTYMSLTLTLITSAWKLV-----TLSSEGTTTGDALAAGVKAAVAKHGL-TGKVTAVTTDCEPSMVKMGRLLE---GDATVCTHIGCCNHRLESTTSIVFNGPGINKVMAMARGLVSRYTTSSQAADRLKQFVKTYLGVDNKRVIQDVVTRWWSTSSMAARLIELEVPIKMHEAADKLDPL------LSAADWAVLKMILPVLEPFRNTQTLLEGRKYVTGSLVVPFIYDLRTSLEDAVEDLAELPPDSDANVNTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLATALNPRTKIVYGVDEDEKADVWKLVE--------EEAVKIAVETRNSENSQ--RASSQQGPEAAAGPTSSPTSAGAEESSRKRPRRGIK----MYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 1509
            M+ D+ FK M++   P   +P +      M    ++   K+  +++     + +T+D WTS A + Y+ +T   I+  W+L      T+  E   TG  +AA ++ A+A+  +    + AV  D   ++V    +L+   G  +VC    C  H L+   S     P I K +  AR LV  +  S  A+ +LK   K  +G+  K++IQDV TRW ST  M  RL+E   P+    +   + P       L    WA+L+ +   L+ F +    L G  YVT S + P +  L+ S +   E          A V   +AAA     A        W   R + +  +            Q++A AL+PR + +  +  +E+  V   V+        EE  K    T N E+    + +S    ++  G  SS T + +E + +    + I     MY  +   +K   +PL WW+   A +P LA+LAR  L IPAT   SERLFS AGNI +K R +L P  V++L  L
Sbjct:   31 MVEDEGFKQMINTFHPGYTLPSRTHFTKLMEEKYEAAAAKIIDVLKLTKSKIALTADAWTSVATEAYLGITCHFISDDWELTSFCLTTMPLEERHTGVNIAAWIEHAIARFQVPASNIVAVVHDNGSNVVLAANILKEKRGWNSVC----CAGHTLQLVISHALKHPQITKALGAARCLVEHFKRSELASSKLKTKQKQ-MGIPEKKLIQDVSTRWNSTFHMVTRLLEQRWPLTATLSDPTVTPRGKQHLDLKPDQWALLEELAKALQAFESATVYLSGETYVTVSALPPLVRGLQKSTQTTYET---------APVQAFQAAASQETTAC-------WS--REVTVKDDS--------PDTQIIAAALDPRFRKLKFLTPEERFSVQSKVQSLASQSMQEETAKKQCATENEESITCFKRTSNGSLDSLFGCDSS-TDSDSETAEQYAQNQAITNEVLMYFGEHPLSKTE-NPLSWWKSNEAKYPSLASLARSFLCIPATSTPSERLFSAAGNITSKKRASLIPEHVDMLTFL 531          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11761.1513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7Y8_9PHAE1.350e-19274.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUY5_9PHAE4.510e-12043.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI1.780e-11842.31Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JHP9_9PHAE2.600e-10741.85Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JJV8_9PHAE9.450e-10140.55Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JWI1_9PHAE2.480e-9268.91Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KVI1_9PHAE1.050e-8746.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVE5_9PHAE2.020e-5790.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A669CH32_ORENI4.090e-3928.44BED-type domain-containing protein n=4 Tax=Ovalent... [more]
A0A671UN90_SPAAU8.500e-3828.28Dimer_Tnp_hAT domain-containing protein n=3 Tax=Sp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11761contigEcto-sp13_S_contig11761:623..2287 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score374.4
Seed ortholog evalue8.3e-101
Seed eggNOG ortholog2880.D8LCS5
Model size1509
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
Cds size1509
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462619.5030756-CDS-Ecto-sp13_S_contig11761:622..8711681462619.5030756-CDS-Ecto-sp13_S_contig11761:622..871Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11761 623..871 +
1681462619.5121882-CDS-Ecto-sp13_S_contig11761:886..19131681462619.5121882-CDS-Ecto-sp13_S_contig11761:886..1913Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11761 887..1913 +
1681462619.525406-CDS-Ecto-sp13_S_contig11761:2054..22871681462619.525406-CDS-Ecto-sp13_S_contig11761:2054..2287Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11761 2055..2287 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11761.1513.1prot_Ecto-sp13_S_contig11761.1513.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11761 623..2287 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11761.1513.1

>prot_Ecto-sp13_S_contig11761.1513.1 ID=prot_Ecto-sp13_S_contig11761.1513.1|Name=mRNA_Ecto-sp13_S_contig11761.1513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=503bp
MLADKSFKAMVHAIRPSARIPEKKDCVTTMRTVKKSMMEKVSRLIEGEHV
CITSDVWTSCANDTYMSLTLTLITSAWKLVTLSSEGTTTGDALAAGVKAA
VAKHGLTGKVTAVTTDCEPSMVKMGRLLEGDATVCTHIGCCNHRLESTTS
IVFNGPGINKVMAMARGLVSRYTTSSQAADRLKQFVKTYLGVDNKRVIQD
VVTRWWSTSSMAARLIELEVPIKMHEAADKLDPLLSAADWAVLKMILPVL
EPFRNTQTLLEGRKYVTGSLVVPFIYDLRTSLEDAVEDLAELPPDSDANV
NTARAAAMPCIKALRDDFINRWGDGRNILIYKEGRRWQPGGFKPVQVLAT
ALNPRTKIVYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGP
EAAAGPTSSPTSAGAEESSRKRPRRGIKMYEEDKEGAKVYLDPLDWWRVR
CADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELL
VLL
back to top

mRNA from alignment at Ecto-sp13_S_contig11761:623..2287+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11761.1513.1 ID=mRNA_Ecto-sp13_S_contig11761.1513.1|Name=mRNA_Ecto-sp13_S_contig11761.1513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1665bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11761:623..2287+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTAGCGGATAAAAGCTTCAAGGCTATGGTACACGCCATACGCCCAAG TGCCAGAATCCCAGAGAAGAAAGACTGCGTGACCACCATGCGTACTGTCA AGAAGTCCATGATGGAGAAGGTGTCAAGACTGATCGAGGGCGAGCACGTT TGCATCACCTCCGACGTCTGGACCTCTTGCGCCAACGACACCTACATGTC GCTGACGCTCACCCTTATCACCAGTGCCTGGAAGCTCGTCACTCTTTCGG TGGACTGCAGTTAGTCGGAAGGAACGACGACAGGTGATGCTCTTGCTGCT GGTGTCAAAGCCGCGGTGGCGAAGCATGGTCTGACTGGCAAAGTCACCGC TGTTACAACTGACTGTGAGCCTTCAATGGTGAAGATGGGACGCCTTCTCG AAGGAGACGCTACCGTTTGCACCCACATTGGCTGCTGCAACCACCGGCTT GAAAGCACCACCTCCATCGTCTTCAACGGGCCGGGGATCAATAAGGTCAT GGCCATGGCCCGCGGCTTGGTATCGCGATACACGACATCGAGCCAGGCGG CCGACAGGCTCAAGCAGTTTGTCAAGACCTACCTTGGTGTTGACAACAAG CGGGTGATCCAGGACGTGGTCACCAGGTGGTGGTCCACATCCAGCATGGC AGCGCGACTGATAGAGCTTGAGGTACCTATTAAGATGCACGAGGCGGCGG ACAAGCTGGACCCGCTACTTTCGGCGGCAGACTGGGCGGTTCTTAAGATG ATATTGCCTGTCCTGGAACCGTTCAGAAACACCCAGACTTTGCTTGAGGG CCGCAAGTATGTGACGGGTAGCTTAGTGGTACCCTTCATCTACGACCTCC GCACCAGCCTCGAGGACGCGGTCGAAGATCTCGCCGAGCTACCGCCCGAC TCGGACGCCAACGTGAACACGGCGAGGGCGGCGGCGATGCCGTGCATCAA GGCGCTCCGAGACGATTTCATCAACCGGTGGGGAGACGGACGCAACATCC TGATCTACAAGGAGGGCCGCAGGTGGCAACCAGGTGGTTTCAAGCCTGTG CAGGTGCTAGCAACCGCGCTCAACCCTCGCACGAAGATCGTGTACGGAGT GGACGAGGACGAGAAGGCCGACGTTTGGAAGCTCGTGGAGGAAGAGGCGG TGAAGATCGCGGTAGAAACCCGCAATTCGGAGAACTCTCAGCGCGCCTCG TCGCAGCAAGGACCAGAAGCAGCGGCAGGACCGACATCATCGCCCACCAG TGCGGGTGCAGAAGAATCCTCGAGAAAGCGCCCGCGCCGTGGTGGTGGTG GCTTCATGGCGGCGGCGCAAGCGGTCGGAGGCGCACGAACCCCGCAGCTG GACGAAGGCGCTGATAGCTCCTTCGTGCGCCTCATCACGAGCTCGGTGCG GGTCGAGCTCACGGCCTTCAAGGTGTCCACAGGTATCAAGATGTACGAGG AAGATAAGGAAGGCGCAAAGGTCTACCTTGACCCCTTGGACTGGTGGCGG GTACGGTGCGCAGACTTCCCGCACTTGGCCAACCTCGCCCGCCGTGTGCT GGCGATCCCCGCCACTCAGGCAGAGTCCGAGCGTCTGTTTTCCTGCGCTG GAAACATCGTCACGAAGAATCGCAACAACTTGGCCCCGACCACCGTCGAG CTGCTCGTCCTTCTG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11761:623..2287+

>mRNA_Ecto-sp13_S_contig11761.1513.1 ID=mRNA_Ecto-sp13_S_contig11761.1513.1|Name=mRNA_Ecto-sp13_S_contig11761.1513.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1509bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11761:623..2287+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTAGCGGATAAAAGCTTCAAGGCTATGGTACACGCCATACGCCCAAG
TGCCAGAATCCCAGAGAAGAAAGACTGCGTGACCACCATGCGTACTGTCA
AGAAGTCCATGATGGAGAAGGTGTCAAGACTGATCGAGGGCGAGCACGTT
TGCATCACCTCCGACGTCTGGACCTCTTGCGCCAACGACACCTACATGTC
GCTGACGCTCACCCTTATCACCAGTGCCTGGAAGCTCGTCACTCTTTCGT
CGGAAGGAACGACGACAGGTGATGCTCTTGCTGCTGGTGTCAAAGCCGCG
GTGGCGAAGCATGGTCTGACTGGCAAAGTCACCGCTGTTACAACTGACTG
TGAGCCTTCAATGGTGAAGATGGGACGCCTTCTCGAAGGAGACGCTACCG
TTTGCACCCACATTGGCTGCTGCAACCACCGGCTTGAAAGCACCACCTCC
ATCGTCTTCAACGGGCCGGGGATCAATAAGGTCATGGCCATGGCCCGCGG
CTTGGTATCGCGATACACGACATCGAGCCAGGCGGCCGACAGGCTCAAGC
AGTTTGTCAAGACCTACCTTGGTGTTGACAACAAGCGGGTGATCCAGGAC
GTGGTCACCAGGTGGTGGTCCACATCCAGCATGGCAGCGCGACTGATAGA
GCTTGAGGTACCTATTAAGATGCACGAGGCGGCGGACAAGCTGGACCCGC
TACTTTCGGCGGCAGACTGGGCGGTTCTTAAGATGATATTGCCTGTCCTG
GAACCGTTCAGAAACACCCAGACTTTGCTTGAGGGCCGCAAGTATGTGAC
GGGTAGCTTAGTGGTACCCTTCATCTACGACCTCCGCACCAGCCTCGAGG
ACGCGGTCGAAGATCTCGCCGAGCTACCGCCCGACTCGGACGCCAACGTG
AACACGGCGAGGGCGGCGGCGATGCCGTGCATCAAGGCGCTCCGAGACGA
TTTCATCAACCGGTGGGGAGACGGACGCAACATCCTGATCTACAAGGAGG
GCCGCAGGTGGCAACCAGGTGGTTTCAAGCCTGTGCAGGTGCTAGCAACC
GCGCTCAACCCTCGCACGAAGATCGTGTACGGAGTGGACGAGGACGAGAA
GGCCGACGTTTGGAAGCTCGTGGAGGAAGAGGCGGTGAAGATCGCGGTAG
AAACCCGCAATTCGGAGAACTCTCAGCGCGCCTCGTCGCAGCAAGGACCA
GAAGCAGCGGCAGGACCGACATCATCGCCCACCAGTGCGGGTGCAGAAGA
ATCCTCGAGAAAGCGCCCGCGCCGTGGTATCAAGATGTACGAGGAAGATA
AGGAAGGCGCAAAGGTCTACCTTGACCCCTTGGACTGGTGGCGGGTACGG
TGCGCAGACTTCCCGCACTTGGCCAACCTCGCCCGCCGTGTGCTGGCGAT
CCCCGCCACTCAGGCAGAGTCCGAGCGTCTGTTTTCCTGCGCTGGAAACA
TCGTCACGAAGAATCGCAACAACTTGGCCCCGACCACCGTCGAGCTGCTC
GTCCTTCTG
back to top