mRNA_Ecto-sp13_S_contig11725.1489.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11725.1489.1
Unique NamemRNA_Ecto-sp13_S_contig11725.1489.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)

HSP 1 Score: 707 bits (1826), Expect = 2.870e-248
Identity = 379/399 (94.99%), Postives = 385/399 (96.49%), Query Frame = 1
Query:    1 MDAEGYAFLRQLHGLPRGHTPNLRASPLTEAAARRRLRLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKKEETPAALEEAEEKLRRCHNMFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTLEFSSVASGIASGKVSPATGQVWAPPLLETRMAQEFRRATRRPGSQPPXXXXXGXXXXXXXXXXXDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFSKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS 1197
            +DAEGYAFLRQLHGLPRGHTPNLRASPLTEAAARRRL LFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVV FEALVGNLARIVVQDSK+EETPAALEEAEEKLRR HNMFHNAVVWDPLKN+LRHFSGAASSLAITKDTGTLEFSSVASGIASG+VSP TGQVWAPPLLETR+AQE RRATRRPGSQPPXXXXX XXXXXXXXXXX      NKRSR AVTHDTNNYHKHGFSRLPGAEEDF+KWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFL QVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS
Sbjct:  224 IDAEGYAFLRQLHGLPRGHTPNLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVSFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRAHNMFHNAVVWDPLKNTLRHFSGAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQELRRATRRPGSQPPXXXXXXXXXXXXXXXXXXXX---NKRSRNAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLGQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS 619          
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: D7FQM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM4_ECTSI)

HSP 1 Score: 687 bits (1773), Expect = 9.870e-247
Identity = 368/398 (92.46%), Postives = 374/398 (93.97%), Query Frame = 1
Query:    1 MDAEGYAFLRQLHGLPRGHTPNLRASPLTEAAARRRLRLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKKEETPAALEEAEEKLRRCHNMFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTLEFSSVASGIASGKVSPATGQVWAPPLLETRMAQEFRRATRRPGSQPPXXXXXGXXXXXXXXXXXDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFSKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGM 1194
            MDAEGY FLRQLHGLPR HTPNLRASPLTEAAARRRL LFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSK+EETPAALEEAEEKLRR  NMFHNAVVWDPLKN+LRHFS AASSLAITKDTGTLEFSSVASGIASG+VSP TGQVWAPPLLETR+AQEFRRATRR GSQ P XXXX XXXXX      DQST RNKRSRKAVTHDTNNY KHGFSRLPGAEEDF+KWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERM MP LPGPRSRISGFEHLQQHLPEMSKSVILQFL+QVNPISGEGSRV   GMQKVMDMGNLNRLWGVPAKNGLMYLGM
Sbjct:    1 MDAEGYDFLRQLHGLPRRHTPNLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSQNMFHNAVVWDPLKNTLRHFSCAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEFRRATRRAGSQMPPXXXXXXXXXX------DQSTGRNKRSRKAVTHDTNNYRKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPGLPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRV---GMQKVMDMGNLNRLWGVPAKNGLMYLGM 389          
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: D7G6L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L7_ECTSI)

HSP 1 Score: 562 bits (1449), Expect = 8.600e-199
Identity = 312/354 (88.14%), Postives = 316/354 (89.27%), Query Frame = 1
Query:    1 MDAEGYAFLRQLHGLPRGHTPNLRASPLTEAAARRRLRLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKKEETPAALEEAEEKLRRCHNMFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTLEFSSVASGIASGKVSPATGQVWAPPLLETRMAQEFRRATRRPGSQPPXXXXXGXXXXXXXXXXXDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFSKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFL 1062
            MDAEGY FLRQLHGLPR HTPNLRASPLTEAAARRRL LFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSK+EETPAALEEAEEKLRR HNMFHNAVVW PLKN+LRHFS AASSLAITKDTGTLEFS VASGIASG+VSP TGQVWAPPLLE RMAQEFRRATRRPGSQPPXXXXX XXXXXXX    DQST RNKRSRKAVTHDTNNYHKHGFSRLPGAEEDF+KWTVAQLREFLSV                      QVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERM MPELPGPRSRISGFEHLQQHLPEMSKSVILQFL
Sbjct:    1 MDAEGYDFLRQLHGLPRRHTPNLRASPLTEAAARRRLSLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKEEETPAALEEAEEKLRRSHNMFHNAVVWGPLKNTLRHFSCAASSLAITKDTGTLEFSYVASGIASGEVSPTTGQVWAPPLLEARMAQEFRRATRRPGSQPPXXXXXXXXXXXXX----DQSTGRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSV----------------------QVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFL 328          
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: D7G3Y3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y3_ECTSI)

HSP 1 Score: 501 bits (1291), Expect = 1.820e-175
Identity = 269/283 (95.05%), Postives = 275/283 (97.17%), Query Frame = 1
Query:  349 MFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTLEFSSVASGIASGKVSPATGQVWAPPLLETRMAQEFRRATRRPGSQPPXXXXXGXXXXXXXXXXXDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFSKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS 1197
            MFHNAVVWDPLKN+LRHFSGAASSLAIT DTGTLEFSSVASGIASG+VSP TGQVWAPPLLETR+AQEFRRATRRPGSQPPXXXXX XXXXXXXXXXX  STSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDF+KWTVAQLREFLSVFRCLDHAGHSAYLKGPL ELAGQ+VAMIKKCGLLNSNQAFRHPVPDLSSFQDKERM MPELPGPRSRISGFEHLQQHLPEMSKSVILQFL+QVNPISGEGSRVWYRGMQKV DMGNLNRLWGVPAKNGLMYLGMS
Sbjct:    1 MFHNAVVWDPLKNTLRHFSGAASSLAITNDTGTLEFSSVASGIASGEVSPTTGQVWAPPLLETRIAQEFRRATRRPGSQPPXXXXXXXXXXXXXXXXX--STSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLVELAGQIVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRVWYRGMQKVTDMGNLNRLWGVPAKNGLMYLGMS 281          
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: A0A6H5KVY6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 1.840e-113
Identity = 199/399 (49.87%), Postives = 269/399 (67.42%), Query Frame = 1
Query:   10 EGYAFLRQLHGLPRGHTP---NLRASPLTEAAARRRLRLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKKEETPAALEEAEEKLRRCHNMFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTLEFSSVASGIASGKVSPATGQVWAPPLLETRMAQEFRRATRRPGSQPPXXXXXGXXXXXXXXXXXDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFSKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS 1197
            + + +LRQLHG+   HTP    L  +PL E  ARRRL LFA + GNDFA FKN+GPV AA++AF         T+ ++PF+A+VG+LA  ++ +SK+E+TPAA  E E +LR CH MF   VVW+PL   L+H SGA +S  IT+ TGTLE S +ASG+A G V P TG  W PPL     AQ   +A     S+P                    ++SR  R+R     +TNNY  HGFSRLPG  ED++KWTV +LREFL+VFRCLD+AG S + K  LA++AG VV +I+ CG+L++N AFRHPVPDLSSF++KE  +MP+LP    RI  +  +++HLPE+SK+VIL+F+++VN ++GEGSR+WYR +Q+V+DMGNL+R W V A  G+M++G S
Sbjct:  433 DAHGWLRQLHGI---HTPVDEGLDYTPLPEPTARRRLVLFAMIVGNDFAKFKNVGPVTAARLAFVDAASGVWATS-LLPFDAVVGDLASRLLVESKEEDTPAAWREVEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGGEWDPPL---GTAQAKGQAAGEDASRPKKKVTPEIASSRPP-----NASSRTSRARGPQ--ETNNYRAHGFSRLPGETEDYTKWTVPKLREFLTVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRHLPEISKAVILRFMREVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVSAAGGIMWIGTS 817          
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: D7G0K2_ECTSI (Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 7.940e-105
Identity = 188/405 (46.42%), Postives = 260/405 (64.20%), Query Frame = 1
Query:   10 EGYAFLRQLHGLPRGHTPNLRASPLTEAAARRRLRLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKKEETPAALEEAEEKLRRCHNMFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTLEFSSVASGIASGKVSPATGQVWAPPLLETRM---------AQEFRRATRRPGSQPPXXXXXGXXXXXXXXXXXDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFSKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS 1197
            + + +LRQLHG+ +     L  +PL E  ARRRL LFA + GNDFA FKN+GPV AA++AF   E      A+++PF+A+VG LA  ++ +S++E+TPA   E E +LR CH MF   VVW+PL   L+H SGA +   IT+  GT E S +AS +A     P TG+ W PPL   +           ++ +RAT    S  P                   ++SR  RSR     DTNNY +HGFSRLP   ED++K TV +LREFLSVFRCLD+AG S + K  LA++AG VV +I+ CG+L++N AFRHPVPDLSSF++KE  +M +LP    RI  +  ++++LPE+SK+VIL+F+ +V  ++GEGSR+WYR +Q+V+DMGNL+R W VPA  G+M++G S
Sbjct:  188 DAHGWLRQLHGIHQPVDEGLDYTPLPEPTARRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGV-WAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPP-----------------NASSRASRSRGPQ--DTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGTS 572          
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: D7FZG7_ECTSI (Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG7_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 7.900e-93
Identity = 162/334 (48.50%), Postives = 222/334 (66.47%), Query Frame = 1
Query:  223 AAVVPFEALVGNLARIVVQDSKKEETPAALEEAEEKLRRCHNMFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTLEFSSVASGIASGKVSPATGQVWAPPLLETRM---------AQEFRRATRRPGSQPPXXXXXGXXXXXXXXXXXDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFSKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS 1197
            A++ PF+A+VG+LA  ++ +S++E+TPAA  E E +LR CH M    VVWDPL   L+H SGA +   IT+ TGTLE S +AS +A G V P TG+ W PPL   +           ++ +RAT    S  P                   ++SR  R+R     DTNNY +HGFSRLPG  ED++KWTV +LREFLSVFRCLD AG S + K  LA++AG VV +I+ CG+L++N AFRHPVPDLSSF++KE  +MP+LP    RI  +  ++++LPE+SK+VI +FL +VN ++GEGSR+WYR +Q+V+DMGNL+R W VPA  G+M++G S
Sbjct:  190 ASLQPFDAVVGDLASRLLVESREEDTPAARREFEIRLRACHTMVTQPVVWDPLSGELQHLSGAPTREEITRHTGTLELSPLASRVARGDVCPLTGREWDPPLGTAQAKGQAVGEDAGRQKKRATPETASTRPP-----------------NASSRASRARGPQ--DTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDTAGTSGFKKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVISRFLGEVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGTS 504          
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: D7FZU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 3.930e-88
Identity = 169/401 (42.14%), Postives = 238/401 (59.35%), Query Frame = 1
Query:   25 LRQLHGLPRGHTPNLRASPLTEAAARRRLRLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKKEET-PAALEEAEEKLRRCHNMFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTLEFSSVASGIASGKVSPATGQVWAPPLLETR---------MAQEFRRATRRPGSQPPXXXXXGXXXXXXXXXXXDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFSKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS 1197
            LRQLHG+ +        +PL E  ARRRL LFA + G DFA FKN+GPV AA++AF             V  E++ G    +     +  ET P     +  +  R   +    VVW+PL   L+H SGA++   IT+ TGTLE S +AS +A G +   TG+ W PPL   +           ++ ++AT    S  P                   S + ++ SR     DTNNY +HGFSRLPG  ED++KWTV +LREFLSVFRCLD+ G S   K  LA++AG VV +I+ CG+L++N AFRHP PDLSSF++KE  +MP+LP    RI  +  ++++LPE+SK+VIL+F+++VN ++G+GSR+WYR +Q+V+DMGNL+R W V A   +M++G S
Sbjct:  166 LRQLHGIHQPVDEGFDYTPLPEPTARRRLLLFAIIVGKDFAKFKNVGPVTAARLAF-------------VDTESVSGR--HLCYHSMRLWETWPQGCWWSPGRRTR---LLRGPVVWNPLSGELQHLSGASTREEITRHTGTLELSPLASRVARGDICLLTGREWDPPLGTAQGKGQAAGADAGRQKKKATPETASSRP-------------------SNASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNTGTSGLNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPFPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMREVNKLAGKGSRLWYRSLQRVLDMGNLSRFWTVQAAGSIMWIGTS 529          
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: D7G2U9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U9_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 2.050e-66
Identity = 105/114 (92.11%), Postives = 108/114 (94.74%), Query Frame = 1
Query:  871 MIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMSFQGHI 1212
            MIKKCGLLNSNQAFRHP+PDLSSFQDKERM MPELPGPRSRISGFEH QQHLPEMSKSVILQF +QVNPISGEGSRVWYRGMQKVMDMGNLNRLW VPAKNGLMYLGMSF G +
Sbjct:    1 MIKKCGLLNSNQAFRHPIPDLSSFQDKERMAMPELPGPRSRISGFEHPQQHLPEMSKSVILQFPRQVNPISGEGSRVWYRGMQKVMDMGNLNRLWRVPAKNGLMYLGMSFVGAL 114          
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Match: D7G4G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 9.930e-57
Identity = 145/401 (36.16%), Postives = 204/401 (50.87%), Query Frame = 1
Query:   10 EGYAFLRQLHGLPRGHTPNLRASPLTEAAARRRLRLFATLAGNDFADFKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKKEETPAALEEAEEKLRRCHNMFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTLEFSSVA-----SGIASGKVSPATGQVWAPPLLETRMAQEFRRATRRPGSQPPXXXXXGXXXXXXXXXXXDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFSKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMS 1197
            + + +LRQLHG+ +     L  +PL E   RRRL LFA + GNDFA FKN+GPV AA++AF   E      A+++PF+A+VG+LA  ++ +S++E+TPAA     E   R    F      D   N   +    A    +    G    +  A     +G ++ + +      W          Q   RAT    S  P                   ++SR  R+R     DTNNY +HGFSRLPG  ED++KWTV +LREF+SV+RCLD+AG S + K  LA++AG VV +I+ CG+L++N AFRHPVPDLSSF+++E  +MP+LP    RI                                     +    V+DMGNL+R W VPA  G+M++G S
Sbjct:  161 DAHGWLRQLHGIHQPVDEGLDYTPLPEPTGRRRLLLFAVIVGNDFAKFKNVGPVTAARLAFVDTESGV-WAASLLPFDAVVGDLASRLLVESREEDTPAARPRGVEPAERRTPTFVRRP--DQGGNHPPYRDVGAIPAGVPCGPGRCLSADRARMGPTAGYSTNEGAGGRRGCW----------QAEERATLETASTRPP-----------------NASSRASRARGPQ--DTNNYREHGFSRLPGETEDYTKWTVPKLREFVSVYRCLDNAGTSGFNKALLAQMAGDVVRVIRSCGVLDTNLAFRHPVPDLSSFEEEEARLMPDLPATGLRI-------------------------------------KIAAAVLDMGNLSRFWAVPAAGGIMWIGTS 492          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11725.1489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KFX7_9PHAE2.870e-24894.99Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FQM4_ECTSI9.870e-24792.46Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G6L7_ECTSI8.600e-19988.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Y3_ECTSI1.820e-17595.05Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KVY6_9PHAE1.840e-11349.87Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G0K2_ECTSI7.940e-10546.42Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=... [more]
D7FZG7_ECTSI7.900e-9348.50Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus ... [more]
D7FZU5_ECTSI3.930e-8842.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2U9_ECTSI2.050e-6692.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4G5_ECTSI9.930e-5736.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11725contigEcto-sp13_S_contig11725:1982..5193 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score347.1
Seed ortholog evalue1.2e-92
Seed eggNOG ortholog2880.D7G0K2
Model size1375
KEGG koko:K10746
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.5'-3' exodeoxyribonuclease activity
EggNOG OGsCOG0258@1,KOG2518@2759
Cds size1311
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462617.534451-UTR-Ecto-sp13_S_contig11725:1981..20451681462617.534451-UTR-Ecto-sp13_S_contig11725:1981..2045Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11725 1982..2045 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462617.549348-CDS-Ecto-sp13_S_contig11725:2045..21601681462617.549348-CDS-Ecto-sp13_S_contig11725:2045..2160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11725 2046..2160 -
1681462617.558444-CDS-Ecto-sp13_S_contig11725:2341..27481681462617.558444-CDS-Ecto-sp13_S_contig11725:2341..2748Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11725 2342..2748 -
1681462617.5665264-CDS-Ecto-sp13_S_contig11725:3040..33871681462617.5665264-CDS-Ecto-sp13_S_contig11725:3040..3387Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11725 3041..3387 -
1681462617.5750692-CDS-Ecto-sp13_S_contig11725:4751..51931681462617.5750692-CDS-Ecto-sp13_S_contig11725:4751..5193Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11725 4752..5193 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11725.1489.1prot_Ecto-sp13_S_contig11725.1489.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11725 2046..5193 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11725.1489.1

>prot_Ecto-sp13_S_contig11725.1489.1 ID=prot_Ecto-sp13_S_contig11725.1489.1|Name=mRNA_Ecto-sp13_S_contig11725.1489.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=437bp
MDAEGYAFLRQLHGLPRGHTPNLRASPLTEAAARRRLRLFATLAGNDFAD
FKNIGPVRAAKVAFELIEPDPRGTAAVVPFEALVGNLARIVVQDSKKEET
PAALEEAEEKLRRCHNMFHNAVVWDPLKNSLRHFSGAASSLAITKDTGTL
EFSSVASGIASGKVSPATGQVWAPPLLETRMAQEFRRATRRPGSQPPPPP
PPGPPPPPGPTPPPDQSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDF
SKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNS
NQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVI
LQFLQQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLGMSF
QGHIHNCPPPPPHPLVHPACACSFVGALLRNPLVHF*
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mRNA from alignment at Ecto-sp13_S_contig11725:1982..5193-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11725.1489.1 ID=mRNA_Ecto-sp13_S_contig11725.1489.1|Name=mRNA_Ecto-sp13_S_contig11725.1489.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11725:1982..5193- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGCCGAAGGCTACGCCTTTCTCCGGCAACTGCACGGGCTTCCCCG CGGGCACACGCCCAACTTACGCGCTTCGCCTCTTACCGAAGCCGCCGCCC GCCGTAGGCTGCGTTTGTTCGCCACTCTCGCCGGAAACGACTTCGCCGAT TTCAAGAACATCGGCCCTGTCAGGGCGGCCAAAGTGGCCTTCGAATTGAT CGAACCAGATCCTCGCGGAACAGCCGCCGTTGTGCCTTTCGAGGCGCTTG TGGGCAACTTGGCAAGGATCGTCGTGCAGGATTCCAAGAAAGAGGAAACA CCAGCAGCCCTAGAGGAGGCGGAGGAAAAGCTCAGGAGGTGTCATAACAT GTTCCACAATGCGGTGGTGTGGGACCCGCTGAAGAACAGCCTCCGACATT TCTCCGGTGCTGCGTCTTCGCTGGCCATCACCAAAGACACAGGTCAGAGT CGTGGGGGTCGTGTATGTGTTATCTGCTCCTGTCACGCCAAATATGCCCC ACCCACGTGTAGTATCTCGGGGGTAACATCAGTTCCTAGGAGTGGCATGT TGTTCAGTGCCTGTGCCTTATCGTTCCGCGGTGATGGCTAAACACATCGT CGACAACGTGTCTATGGGCATGTGTAGTCTGCAGACAGAGTAGGTCTTTC GTGTACATGCTGTGCAGCTTCTCCGTTGGATCTTCTTCAGTTTAAGCTGG GCTTTGCCCATCCATGTCGTGGCAGCGGGACGAAGGCAATATTTTTTCGC CTACTCTCTGTAGCGCGCCCGACTCTAGGCGATATACCGTAAACTACGGA GTTTTCCCCCCCTAGTACAGATTTCCCCCCCCCTATTACCTTTTCGGCCT GGAAGCATGGTTTCGTTGATTTAGCCCCAGGGTAGATCGTTTTCGACCAA AAAAAAATGACCCCCCCCGGTATTTCAATTTTCCCACGGGGTACCAGTTT TCCCACGAGTTCCCCCCGCGGGGGTTGTATTTCCCTTATTTTCTGAGTCG ATGTTGTTGCATCGCGGAGCACAAAAAACATGATATGGGACGGGAAATTC ATCATCTGCAGATCTCCGCTTCGAGCGAGATTGGGTGTACCGTTTGTCAC TTGGCTCTCGCCGTTGTTTTATGGGTGAAATACTTTCGTTTTCGTGTCTA TTTCTTGCATTTATCATCCCTGGAATCAGCTGAAATGTACCATAGCATGC TGACGAAATCCTTGCGCATGAGGGGGAAACACAATCGTATTCATTTCTGG ATCTCGCAAATCAAGATAGAACCGAACCACAACATAGCTATTTCCTTTGG ACAAACTGCGAATTCTTGTGCATGAGCTCAGGCAATGGTACCTCTCTTGC GACCCCACAAAAACACCCACACCGCCTGCCATATGCTCGCTGTCTTTCTT CTCTTTGTCTTCGTTGCTCTTACGTTCCTCCTCCCTCTGCTTGTTGAACG CTTGCTCGTAAACCTTATCCATCTCAGTTTCGCTACTCTGTGTGTGTGTG TGTGTGCAGTTTCGCTACTCTCTCTGTGTGTGTGGTGTGTGGACCATCAA TATTTTGCACAGCCCCCCGGGGGGGGGGCTTCCTCCCGGGGTAGCGTTGG AAAAAAAAAACCAACCCCCCCGGTACGTCAATTTCCCCCCGGGGGGGTTG GTTTCAGAAAAAAAAACGAACCCCTCCCCGGGGGGAAAACTCCGTAGTTT ACGGTACTACGTACACAGTATTGTAGACGACCTAGCTTCCGTTGTCTGTG TGTCGAATCTGAAACAATACTGCTTTACGACGGTTGCTCCTGCTGTATTA CCACAGGTACTCTAGAGTTTTCCTCTGTTGCCTCTGGCATAGCATCGGGG AAAGTTTCTCCTGCCACGGGCCAGGTGTGGGCCCCGCCATTACTGGAGAC CCGGATGGCACAAGAGTTTCGCCGTGCTACACGACGGCCGGGGAGCCAGC CGCCGCCGCCGCCGCCGCCGGGACCGCCGCCGCCGCCGGGACCGACGCCG CCGCCGGACCAGAGTACGAGCCGGAACAAGCGCTCTCGGAAGGCGGTGAC TCACGACACCAACAACTACCATAAACACGGGTTCAGTCGTCTCCCCGGTG CCGAAGAAGACTTCAGCAAGTGGACAGTCGCACAACTACGCGAATTCCTC AGCGTGAGTCCAGCAGTTGCTTTCATGTTACCGTTTGGTATGCATACGGG ATATTTATTCCAAGGGTTGAACAAAGGCGTCGCAAACTGACGCGCGGGAA TTTTAAAGTAGTCCATCGCTTGGTTTATGCTACAATCAGTTGGGCTTTCG AAGGACACGCATTTATCACAGAAACGAGTGTACGAGGGCCCGTCCGTGAC GCGGCACCCCTACTACTGACCGTTTGTCACGCGTACACGCTCAGCGTGTT GCTAATAAAACAACTCACATGGTCCCTGTCCTATACTCGTGGCAGGTTTT TAGGTGCCTCGACCACGCCGGTCACAGCGCGTACCTCAAGGGCCCCCTCG CCGAGCTGGCGGGGCAGGTAGTGGCGATGATCAAGAAGTGCGGGTTGCTC AACAGCAACCAAGCGTTCCGCCATCCTGTCCCGGATCTAAGCTCTTTCCA AGACAAGGAGCGCATGGTCATGCCCGAACTACCCGGCCCCCGCTCGCGGA TCAGCGGCTTTGAACATCTACAGCAGCACCTCCCCGAAATGTCCAAGTCG GTGATCCTGCAGTTTCTCCAACAAGTCAACCCCATCTCTGGCGAGGGTTC GCGGGTTTGGTACAGAGGGATGCAGAAGGTTATGGATATGGGGAACCTGA ACCGGTTGTGGGGCGTCCCGGCCAAGAACGGGTTGATGTATCTGGGAATG AGGTAAGTAGCCCTGGATGGTGCGACCGGAAGTTACCACGCGAGAGGTAT TACTATTGTTGTTGCTGTTGTAGTACTTGTGCTGGTTGTGTCATATCCTC TCGGCAGGCTTGTAAGCGCTTCTCCCACACCGAACGCAGTCTTACCACGA CCAACTACATTCGACACGCATTTCGGGCCATAGTTTTCAAGGTCACATCC ACAACTGCCCCCCCCCACCCCCCCATCCCCTCGTGCATCCCGCATGCGCC TGTAGCTTCGTGGGTGCTCTTTTGCGCAACCCACTTGTTCACTTCTAAGG TGAAGCCCACATTTTTATGCCATGCCCCTCACAAATGTATACGCACCAGT CCGCTTTTACGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11725:1982..5193-

>mRNA_Ecto-sp13_S_contig11725.1489.1 ID=mRNA_Ecto-sp13_S_contig11725.1489.1|Name=mRNA_Ecto-sp13_S_contig11725.1489.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1311bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11725:1982..5193- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGCCGAAGGCTACGCCTTTCTCCGGCAACTGCACGGGCTTCCCCG
CGGGCACACGCCCAACTTACGCGCTTCGCCTCTTACCGAAGCCGCCGCCC
GCCGTAGGCTGCGTTTGTTCGCCACTCTCGCCGGAAACGACTTCGCCGAT
TTCAAGAACATCGGCCCTGTCAGGGCGGCCAAAGTGGCCTTCGAATTGAT
CGAACCAGATCCTCGCGGAACAGCCGCCGTTGTGCCTTTCGAGGCGCTTG
TGGGCAACTTGGCAAGGATCGTCGTGCAGGATTCCAAGAAAGAGGAAACA
CCAGCAGCCCTAGAGGAGGCGGAGGAAAAGCTCAGGAGGTGTCATAACAT
GTTCCACAATGCGGTGGTGTGGGACCCGCTGAAGAACAGCCTCCGACATT
TCTCCGGTGCTGCGTCTTCGCTGGCCATCACCAAAGACACAGGTACTCTA
GAGTTTTCCTCTGTTGCCTCTGGCATAGCATCGGGGAAAGTTTCTCCTGC
CACGGGCCAGGTGTGGGCCCCGCCATTACTGGAGACCCGGATGGCACAAG
AGTTTCGCCGTGCTACACGACGGCCGGGGAGCCAGCCGCCGCCGCCGCCG
CCGCCGGGACCGCCGCCGCCGCCGGGACCGACGCCGCCGCCGGACCAGAG
TACGAGCCGGAACAAGCGCTCTCGGAAGGCGGTGACTCACGACACCAACA
ACTACCATAAACACGGGTTCAGTCGTCTCCCCGGTGCCGAAGAAGACTTC
AGCAAGTGGACAGTCGCACAACTACGCGAATTCCTCAGCGTTTTTAGGTG
CCTCGACCACGCCGGTCACAGCGCGTACCTCAAGGGCCCCCTCGCCGAGC
TGGCGGGGCAGGTAGTGGCGATGATCAAGAAGTGCGGGTTGCTCAACAGC
AACCAAGCGTTCCGCCATCCTGTCCCGGATCTAAGCTCTTTCCAAGACAA
GGAGCGCATGGTCATGCCCGAACTACCCGGCCCCCGCTCGCGGATCAGCG
GCTTTGAACATCTACAGCAGCACCTCCCCGAAATGTCCAAGTCGGTGATC
CTGCAGTTTCTCCAACAAGTCAACCCCATCTCTGGCGAGGGTTCGCGGGT
TTGGTACAGAGGGATGCAGAAGGTTATGGATATGGGGAACCTGAACCGGT
TGTGGGGCGTCCCGGCCAAGAACGGGTTGATGTATCTGGGAATGAGTTTT
CAAGGTCACATCCACAACTGCCCCCCCCCACCCCCCCATCCCCTCGTGCA
TCCCGCATGCGCCTGTAGCTTCGTGGGTGCTCTTTTGCGCAACCCACTTG
TTCACTTCTAA
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