mRNA_Ecto-sp13_S_contig11719.1485.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: D8LIV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV5_ECTSI) HSP 1 Score: 505 bits (1300), Expect = 3.860e-170 Identity = 284/307 (92.51%), Postives = 292/307 (95.11%), Query Frame = 1
Query: 1 APTQSAGTPPGHDDLPLALSVCKDGAFESPLPLPAVPEKEAARASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LWQEVKPEHKAAVTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAEDVLSFEKFVDLTSKTAQARLQKDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEEFGASGWGRWGQAAFFQ 918
AP++SAGTPPG D L LALSVCKD AFESPL LPAVPE+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LWQEVKP+ KA VTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENW+TQRMEEIHYHKDMDKYKLSTMPNMPP RASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAE+VLSFEKFVDLTSKTA+ARLQKDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWE+FGASGWGRWGQAAFFQ
Sbjct: 614 APSESAGTPPGPDGLSLALSVCKDRAFESPLRLPAVPEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWQEVKPKQKAVVTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWNTQRMEEIHYHKDMDKYKLSTMPNMPPERASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQKDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEKFGASGWGRWGQAAFFQ 920
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: A0A6H5JD01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD01_9PHAE) HSP 1 Score: 506 bits (1304), Expect = 1.790e-169 Identity = 269/298 (90.27%), Postives = 277/298 (92.95%), Query Frame = 1
Query: 28 PGHDDLPLALSVCKDGAFESPLPLPAVPEKEAARASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWQEVKPEHKAAVTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAEDVLSFEKFVDLTSKTAQARLQKDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEEFGASGWGRWGQAAFFQR 921
P D LP+ALSVCKDGAFESPLPLPAV E+EAARA+ XXXXXXXXXXXXXXXXXXXX LWQEVKPE KA VTQ DL+SFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDP ERLLSCFLDKVVHRRSYSVNVFKAE+VLSFEKFVDLTSKTA+ARLQ+DYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLW+EFGASGWGRWGQAAFFQR
Sbjct: 702 PSEDGLPVALSVCKDGAFESPLPLPAVREEEAARAAQGAGASYSARRSXXXXXXXXXXXXXXXXXXXX-LWQEVKPEQKAVVTQNDLDSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPAERLLSCFLDKVVHRRSYSVNVFKAEEVLSFEKFVDLTSKTAKARLQQDYPGGNLGLTRRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWKEFGASGWGRWGQAAFFQR 998
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: F0Y5E9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E9_AURAN) HSP 1 Score: 158 bits (400), Expect = 1.710e-42 Identity = 87/218 (39.91%), Postives = 129/218 (59.17%), Query Frame = 1
Query: 253 PEHKAAVTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRR-----SYSVNVFKAEDVLSFEKFVDLTSKTAQARLQKDYPGGNLGLTRRSNPHWRPQLFF-GLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEEFGASGW 888
P + +++L QH +V+HK+L A+PKVACT+ LF RL+G EN + + + H+ +D + M A+A++NDPTWTK F RDP ERLLS +LDK + + SY+V +FK + ++F FVD + + R + D GL +NPHWRPQ F ++KFLP ++FVG F H+ +H+E+ L+ GLWE +GA+GW
Sbjct: 25 PRAPLSYREQELRYAQHHMYVDVKHKLLYCAVPKVACTEFMRLFFRLKG-ENQNQRWKGDPHFRQDKPLFNKI----MNVTTATALMNDPTWTKFAFWRDPAERLLSAYLDKFANGKRYSTGSYAVRIFKDKH-MNFSGFVDRIASKNRVRGKPD------GLHPNTNPHWRPQRFMCNMEKFLPAYNFVGSFDHLGDHAEKLLRALGLWEAYGAAGW 230
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: A0A7S3JPI6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPI6_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.290e-36 Identity = 80/218 (36.70%), Postives = 123/218 (56.42%), Query Frame = 1
Query: 283 DLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLSCFLDKVV--HR--RSYSVNVFKAEDVLSFEKFVDLTSKTAQARLQKDYPGGNLGLTRRSNPHWRPQLFF-GLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEEFGASGWGRWGQAAFFQR 921
+L H + HK++ IPKVACT+ F RL+G + + + H+ D + + A+AI+NDP +TK V+ RDP +RL S ++DK HR SY V +++ ++ L+F +FVD+ L+K GN GL ++NPHWRPQ + L+KFLP ++F+G F H+ EH++ L+ GLWE++G SGW R + F+R
Sbjct: 61 ELRYAAHHAFIDKRHKLVYCGIPKVACTEFFRFFFRLKGEHRDRGRWLGDPHFRSDRPLLSM-----LSTDEATAIMNDPAYTKFVYFRDPVDRLRSAWMDKFHNWHRYTMSYKVKLYQNKN-LTFSEFVDIL-------LEKPSRNGNRGLGPKTNPHWRPQRYLCNLEKFLPLYNFIGSFSHLFEHNKRMLQALGLWEQYGQSGWSRPQRVKRFRR 265
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: A0A835YWJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ0_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.410e-32 Identity = 90/300 (30.00%), Postives = 128/300 (42.67%), Query Frame = 1
Query: 250 KPEHKAAVTQEDLNSFQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLS----------------------------------------------------CFLDKVVHRRSYSVNVFKAEDVLSFEKFVDLTS-----------KTAQARLQKDYPGG-------------NLGLTRRS---------NPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEEFGASGWGR 894
+P T D+ + QHFWL N HK+L +AIPKVACTQ+ LFLR + +WDT M IH+H + + T + + +AI+NDP WT+ V LR+P R+LS +LDK V SY V + +SF +FV++ ++ R + L RR +PH RPQ F +DKFLPY +F+ ++ VQ H E L++ G+WE++GASGWGR
Sbjct: 512 QPAAPVTATDADVVALQHFWLVNKRHKLLYLAIPKVACTQMIQLFLRAVNATDWDTDVMANIHFHSGNKRIRAKTQ--VTAAQLTAIMNDPQWTRAVVLREPRRRVLSLPCVRALFRPLRYPDKLVCGLLSPRRLPRVLTIVTNVRALWRLRDQLTQLPCAYLDKYVLHGSYGDRVRADKRYVSFHEFVEVXXXXXXXXXXXXXESTPVRXXXXXXXXXXXXXXXXXQVDTGMRLARRRTGAHPLSTVDPHHRPQALF-MDKFLPYMNFIAEYTQVQHHVREMLEKVGMWEQYGASGWGR 808
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: A0A7S2WJM7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJM7_9STRA) HSP 1 Score: 127 bits (319), Expect = 7.520e-31 Identity = 76/199 (38.19%), Postives = 109/199 (54.77%), Query Frame = 1
Query: 310 LANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLSCFLDKV---VHRRS-YSVNVFKAEDVLSFEKFVDLTSKTAQARLQKDYPGGNLGLTRRSNPHWRPQL-FFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEEFGASGWG 891
+ +++H+VL+ AIPKVA ++ LFLRLQG W + ++ L+++ + P RA IL DP++ KGVF RDP RLLSC+LDK HR + YS+ +F +LSF +F L+K G N HWRPQ +++ + F G+F+ + EH FL +AGLW+EFG SGWG
Sbjct: 124 IVDLKHRVLICAIPKVASSEWKKLFLRLQGDPEWAAEPWWKMR--------NLTSLYKLGPARAMEILQDPSFIKGVFFRDPFSRLLSCYLDKFSAGTHRANKYSLKIFGDNHLLSFPEF-----------LKKVTAAG-----APMNVHWRPQADICQIEELFHLYSFFGNFERLPEHGRAFLTQAGLWKEFGESGWG 298
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: A0A7S0TAN7_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TAN7_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.500e-28 Identity = 68/195 (34.87%), Postives = 105/195 (53.85%), Query Frame = 1
Query: 325 HKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLSCFLDKVVH------RRSYSVNVFKAEDVLSFEKFVDLTSKTAQARLQKDYPGGNLGLTRRSNPHWRPQLFF-GLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEEFGASGW 888
HK+++ A+PKVACT++ L RL G W + H+ D ++ ++ A+ ++ND +WTK +FLRDP RL S +LDK V +Y + +F + LSFE F + R D GL +N HW+PQ + +KF + FVG +++++EH+E L+ GLW++FGASGW
Sbjct: 110 HKLVLCAVPKVACTELIKLVYRLSGDPRW----RRDPHFRGDSPIFRKLSL-----AEANEMMNDDSWTKVIFLRDPLSRLASAYLDKFVQSPKRGIHANYGIRLFG--ESLSFEAFARRVASNNTDRASHD------GLHLGTNLHWKPQRYICSFEKFAHLYHFVGRYENIREHAESLLRALGLWDDFGASGW 287
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: A0A7S3LEC1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEC1_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.790e-26 Identity = 68/196 (34.69%), Postives = 100/196 (51.02%), Query Frame = 1
Query: 325 HKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKAEDVLSFEKFVDLTSKTAQARLQKDYPGGNLGLT--------RRSNPHWRPQLFFGLDKFLPYFDFVGDFKHVQEHSEEFLKRAGLWEEFGASGW 888
HK+L IPKV CT LF R+ G ++W + + I +H + L+ + + P A +L DP+WT+ +F RDP ERLLS +LDKV+H V V + S + + Q L K P L + +PHWRPQ D + PY +FVG H+++ ++ L++ G W+EFGA GW
Sbjct: 145 HKLLFFTIPKVGCTVFKQLFRRMYGYQSWK-EHNDFIPHHPMSNG--LNYLYHYKPREAERMLTDPSWTRAIFFRDPKERLLSAYLDKVLHENGKYVRVHCCGNNPSLKMLLH-----CQVLLDK-LPNPLLTFADFLEKIVLQCKDPHWRPQAHRLPDLYWPYINFVGHMDHIEQDTKRLLQKIGAWDEFGAHGW 331
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: A0A7S2VCG1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCG1_9STRA) HSP 1 Score: 108 bits (271), Expect = 4.970e-24 Identity = 66/196 (33.67%), Postives = 101/196 (51.53%), Query Frame = 1
Query: 325 HKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVN-----VFKAEDVLSFEKFVDLTSKTAQARLQKDYPGGNLGLTRRS--NPHWRPQLFFGLDKFLPYFDFVGDFKH-VQEHSEEFLKRAGLWEEFGASGW 888
HK+L PKVACT LF R++G +W + H L+ + + P +A +L DP+WT+ +F+R+P ERLLS +LDKVV SY + V E++L + F + S + R LG + +PHWRPQ K+ Y +FVG H V++ ++ L + G W+++GA+GW
Sbjct: 63 HKLLFWTTPKVACTVWKKLFRRMEGYSDWQVENDNLPHSPYTNG---LNYLYHYKPAQADLMLTDPSWTRAIFVREPKERLLSAYLDKVVGNHSYYLRKHCCKVTTIEEILQCDVFHRIPSPSPSLRDPAVSFTEFLGPVYKECVDPHWRPQAKRMPAKYWSYINFVGHLDHGVEKDAQRLLTQIGAWDDYGANGW 255
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Match: A0A7S2XMP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMP6_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.090e-22 Identity = 67/196 (34.18%), Postives = 100/196 (51.02%), Query Frame = 1
Query: 295 FQHFWLANVEHKVLMVAIPKVACTQVHALFLRLQGSENWDTQRMEEIHYHKDMDKYKLSTMPNMPPGRASAILNDPTWTKGVFLRDPTERLLSCFLDKVVHRRSYSVNVFKA---------EDVLSFEKFVDLT--------SKTAQARLQKDYPGGNLGLTRRSNPHWRPQLFF-GLDKFLPYFDFVGDFKHVQE 828
F+H E K++ IPKV T+ F QG++++ + H D +Y +S++ +A +L DPTWTK VFLR+P ERLLS +LDK+ + ++ VFK VL+FE+F+DL ++ A R GL ++PHW+PQ+ GLD LP F+F+G F H+ E
Sbjct: 180 FRHHLFFIPEAKLVFCGIPKVGITEWIKFFRYKQGAKDY----LSSPHSKSDRMEYFMSSLSRE---KAKEVLQDPTWTKAVFLRNPAERLLSSYLDKIKGPQGFTQRVFKIGSMDDPKPKRKVLTFEEFIDLVVLDDDDNPNRCADPR----------GLHSCTDPHWKPQVMTCGLDHLLPQFNFIGSFDHISE 358 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11719.1485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11719.1485.1 >prot_Ecto-sp13_S_contig11719.1485.1 ID=prot_Ecto-sp13_S_contig11719.1485.1|Name=mRNA_Ecto-sp13_S_contig11719.1485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=307bp APTQSAGTPPGHDDLPLALSVCKDGAFESPLPLPAVPEKEAARASAAAGAback to top mRNA from alignment at Ecto-sp13_S_contig11719:102..4836+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11719.1485.1 ID=mRNA_Ecto-sp13_S_contig11719.1485.1|Name=mRNA_Ecto-sp13_S_contig11719.1485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4735bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11719:102..4836+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11719:102..4836+ >mRNA_Ecto-sp13_S_contig11719.1485.1 ID=mRNA_Ecto-sp13_S_contig11719.1485.1|Name=mRNA_Ecto-sp13_S_contig11719.1485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=921bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11719:102..4836+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |