mRNA_Ecto-sp13_S_contig11716.1482.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11716.1482.1
Unique NamemRNA_Ecto-sp13_S_contig11716.1482.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: D7FV64_ECTSI (Actin-related protein 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV64_ECTSI)

HSP 1 Score: 574 bits (1480), Expect = 2.010e-205
Identity = 284/285 (99.65%), Postives = 284/285 (99.65%), Query Frame = 1 
Query:    1 MTSTKFLEDMPGIVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM 855
            M STKFLEDMPGIVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM
Sbjct:    1 MASTKFLEDMPGIVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM 285
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: A0A835YLL4_9STRA (Actin-related protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLL4_9STRA)

HSP 1 Score: 473 bits (1218), Expect = 1.420e-165
Identity = 230/279 (82.44%), Postives = 252/279 (90.32%), Query Frame = 1 
Query:   19 LEDMPGIVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM 855
            L  MP +VCDNGTGFVKVG AGENFPR IFPSL+GRPILRAEE  Q  V LKDIMCGD AAA RASL+T+YPV NGII+NW DMEELWKYTF EKL ++P+ HKILLTEPPLNP++NRE+M ERMFE FGFGA NVSIQA+LTLYAQGL TGVVVD+GDGVSHVIPVYDG+VPQNLI RLDVAGRH+TRY+IKLLLLRGYAFNRTADFET+RQIKEKLCYVA DI  ERRLAQETTVLEE+Y LPDGRVIK+GRERFEAPEPLF+P+L+DVE PGLGDM
Sbjct:    4 LSAMPALVCDNGTGFVKVGVAGENFPRFIFPSLIGRPILRAEEVLQRDVVLKDIMCGDEAAAARASLDTTYPVENGIIKNWADMEELWKYTFHEKLKVDPAAHKILLTEPPLNPSRNRERMCERMFEGFGFGAVNVSIQAILTLYAQGLQTGVVVDTGDGVSHVIPVYDGYVPQNLICRLDVAGRHITRYMIKLLLLRGYAFNRTADFETVRQIKEKLCYVAADIQAERRLAQETTVLEETYELPDGRVIKVGRERFEAPEPLFNPALIDVEKPGLGDM 282
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: A0A8J2WZI9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZI9_9STRA)

HSP 1 Score: 456 bits (1174), Expect = 7.240e-159
Identity = 218/277 (78.70%), Postives = 247/277 (89.17%), Query Frame = 1 
Query:   19 LEDMPGIVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLG 849
            L D   +VCDNGTGFVKVGYA ENFPRSIFPS+VGRPILRAEEA  E V LK++MCGD AAAVR SL+ SYPV NGI+++WDDME LW YTF EKL I+P D+KI+LTEPP+NP  NR+++V  MFE +GFG CNVSIQAMLTLYAQGLLTG VVD+GDGV+HV+PV+DGFVPQNLIRRLDVAGRH+TRYLIKLLLLRGYAFNRTADFET+RQIKEK CYVAHD+ +ERRLAQETTVLE ++TLPDGRVIKLGRERFEAPE LFDPSL+DVE+ G+G
Sbjct:    5 LGDSHCVVCDNGTGFVKVGYASENFPRSIFPSMVGRPILRAEEAISEDVTLKEVMCGDEAAAVRMSLDCSYPVENGIVKDWDDMELLWNYTFYEKLGIDPKDYKIMLTEPPMNPLANRKKLVTAMFELYGFGHCNVSIQAMLTLYAQGLLTGCVVDTGDGVTHVVPVFDGFVPQNLIRRLDVAGRHVTRYLIKLLLLRGYAFNRTADFETVRQIKEKFCYVAHDVNIERRLAQETTVLETTHTLPDGRVIKLGRERFEAPECLFDPSLIDVESKGMG 281
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: A0A7R9U9K1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9K1_9STRA)

HSP 1 Score: 432 bits (1112), Expect = 2.210e-149
Identity = 207/271 (76.38%), Postives = 234/271 (86.35%), Query Frame = 1 
Query:   37 IVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLG 849
            +VCDNGTGFVKVGYAGENFPR IFPSLVGRP+LRAEE   + ++LKDIMCGD A   R SLE SYP+ NGI++NWDDME LW YTF EK+ INPS+H+ILLTEPP+NP +NR++ VERMFEK+GF ACNVSIQAMLTLYAQGLLTGVVVD+GDGV+HV+PV+DGFVP  LIRRLDVAGR +T YLIKLLLLRGY+FN +AD ET+R IKE+ CYVA DI  ERRLAQETTVLE+ YTLPDGR+IKLGRERFEAPE LF P LVDVE  G G
Sbjct:   11 VVCDNGTGFVKVGYAGENFPRFIFPSLVGRPVLRAEEVIDDEIQLKDIMCGDDARRARGSLECSYPIENGIVKNWDDMEHLWNYTFYEKMQINPSEHQILLTEPPMNPKENRQKFVERMFEKYGFAACNVSIQAMLTLYAQGLLTGVVVDTGDGVTHVVPVFDGFVPAELIRRLDVAGRKVTDYLIKLLLLRGYSFNHSADRETVRAIKEEHCYVALDIDAERRLAQETTVLEKEYTLPDGRIIKLGRERFEAPEALFSPHLVDVETVGGG 281
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: F0XXQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXQ8_AURAN)

HSP 1 Score: 453 bits (1166), Expect = 7.950e-149
Identity = 216/279 (77.42%), Postives = 246/279 (88.17%), Query Frame = 1 
Query:   19 LEDMPGIVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM 855
            L D   +VCDNGTGFVKVGYA ENFPRSIFPS+VGRPILRAEEA  + V LK++MCGD AAAVR SL+ +YPV NGI+++WDDME LW YTF EKL I+P D+KI+LTEPP+NP  NR ++V  MFE +G+  CNVSIQAMLTLYAQGLLTG VVD+GDGV+HV+PVYDGFVPQNLIRRLDVAGRH+TRYLIKLLLLRGYAFNRTADFET+RQIKEK CYVAHDI +ERRLAQETTVLE ++TLPDGRVIK+GRERFEAPE LFDPSL+DVE+ G+G M
Sbjct:  710 LGDYHCVVCDNGTGFVKVGYASENFPRSIFPSMVGRPILRAEEAISDDVTLKEVMCGDEAAAVRMSLDCTYPVENGIVKDWDDMELLWNYTFYEKLGIDPKDYKIMLTEPPMNPLANRRKLVTAMFELYGYSYCNVSIQAMLTLYAQGLLTGCVVDTGDGVTHVVPVYDGFVPQNLIRRLDVAGRHVTRYLIKLLLLRGYAFNRTADFETVRQIKEKFCYVAHDIAVERRLAQETTVLEATHTLPDGRVIKIGRERFEAPEALFDPSLIDVESKGMGHM 988
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: K3W8L9_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W8L9_GLOUD)

HSP 1 Score: 429 bits (1104), Expect = 2.850e-148
Identity = 206/274 (75.18%), Postives = 243/274 (88.69%), Query Frame = 1 
Query:   37 IVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPS-DHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM 855
            +VCDNGTGFVK G+A ENFP+ IFPSLVGRPILRAEEA Q+ + LKDIM GD AAAVR++LE SYPV NGI++NWDDME+LW YTF+E+L INPS  H+ILLTEPPLNP +NRE++VE MFEK+GF   N++ QAMLTLYAQG++TGVV+D+GDGV+HV+PVY+G+VPQ+LI RLDVAGRH+T+YLIKLLLLRGYAFNRTADFET+RQIKEKLCYVA++   ER+LA ETTVLEESY LPDGR+IKL RERFEAPE LF+PSL+DVE  GL DM
Sbjct:    8 VVCDNGTGFVKCGFAAENFPKCIFPSLVGRPILRAEEAVQKDILLKDIMFGDEAAAVRSNLEISYPVENGIVKNWDDMEKLWDYTFKERLGINPSAGHRILLTEPPLNPKRNREKLVEMMFEKYGFEGTNITTQAMLTLYAQGIVTGVVIDTGDGVTHVVPVYEGYVPQHLICRLDVAGRHITQYLIKLLLLRGYAFNRTADFETVRQIKEKLCYVAYEPQAERKLANETTVLEESYELPDGRLIKLERERFEAPEALFNPSLIDVEGAGLSDM 281
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: A0A7S2FXL0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXL0_9STRA)

HSP 1 Score: 428 bits (1100), Expect = 2.720e-147
Identity = 208/275 (75.64%), Postives = 236/275 (85.82%), Query Frame = 1 
Query:   19 LEDMPGIVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAA--AVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEA 837
            L DM  +VCDNGTGFVKVGYAGENFPRSIFPS+VGRPILRAEEA  EGV LK++M GD AA   VR SL+ +YPV  G ++NWDDM  LW YTF +KLAINP DHKILLTEPP+NP K R+Q+V  MFE +GF   N+SIQAMLTLYAQGL TGVVVD+GDGV+H +PVYDGFVPQNLI+RL+VAGRH+T Y+IKLLLLRGYAFNRTADFETIRQIKEK CYVA+DI  ERRLA ETTVLEE+YTLPDGRVI++GRERFEA E LF+P L+DVE+
Sbjct:   20 LGDMNCVVCDNGTGFVKVGYAGENFPRSIFPSMVGRPILRAEEAVAEGVVLKEVMVGDEAADPKVRHSLDCAYPVEEGRVKNWDDMMHLWNYTFYDKLAINPGDHKILLTEPPMNPVKERQQLVTTMFETYGFDQVNISIQAMLTLYAQGLFTGVVVDTGDGVTHTVPVYDGFVPQNLIKRLNVAGRHITTYMIKLLLLRGYAFNRTADFETIRQIKEKFCYVAYDIDTERRLALETTVLEENYTLPDGRVIRIGRERFEAAEALFNPDLIDVES 294
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: A0A8K1CC38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CC38_PYTOL)

HSP 1 Score: 432 bits (1112), Expect = 5.880e-147
Identity = 204/274 (74.45%), Postives = 243/274 (88.69%), Query Frame = 1 
Query:   37 IVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSD-HKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM 855
            +VCDNGTGFVKVG+A ENFP+ IFPSLVGRPILRAEEA Q  + L+DIM GD AAAVR++LE SYPV NGI++NWDDME+LW YTF+E+L INP+D H+ILLTEPPLNP +NRE++ E MFEK+GF  CN++ QAMLTLYAQG++TGVV+D+GDGV+HV+PVY+G+VPQ+LI RLDVAGRH+T+YLIKLLLLRGYAFNRTADFET+RQIKEK CYVA+D   ER+LA ETTVLEE+Y LPDGR+I+LGRERFEAPE LF PSL+DVE  G+ DM
Sbjct:  182 VVCDNGTGFVKVGFAAENFPKCIFPSLVGRPILRAEEAVQRDILLQDIMFGDEAAAVRSNLEISYPVENGIVKNWDDMEKLWDYTFKERLGINPADGHRILLTEPPLNPKRNREKLTEIMFEKYGFEGCNITTQAMLTLYAQGIVTGVVIDTGDGVTHVVPVYEGYVPQHLICRLDVAGRHITQYLIKLLLLRGYAFNRTADFETVRQIKEKHCYVAYDPAAERKLASETTVLEETYELPDGRIIRLGRERFEAPEALFQPSLIDVEGAGMSDM 455
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: M4C2W0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C2W0_HYAAE)

HSP 1 Score: 422 bits (1084), Expect = 1.190e-145
Identity = 197/274 (71.90%), Postives = 238/274 (86.86%), Query Frame = 1 
Query:   37 IVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINP-SDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM 855
            +VCDNGTGFVK G+A ENFP++IFPSLVGRP+LRAEEA Q  + LKDIM GD AAA+R++LE SYPV NGI++NWDDME+LW YTF+E+LAI+P + H+ILLTEPPLNP +NRE++VE MFEK+GF  CN++ QAMLTLYAQG+ TGVV+D+GDGV+HV+PV+ G+VPQ+LI RLDVAGRH+T YLIKL+LLRGY  NRTADFET RQIKEK CYVA+D   ER+LA ETT+LEE Y LPDGR+++LGRERFEAPE LFDP+L+DVE  GL DM
Sbjct:    8 VVCDNGTGFVKAGFAAENFPKAIFPSLVGRPVLRAEEAVQSDILLKDIMFGDEAAALRSNLEISYPVENGIVKNWDDMEKLWDYTFKERLAIDPKAGHRILLTEPPLNPKRNREKLVEMMFEKYGFEGCNITTQAMLTLYAQGITTGVVIDTGDGVTHVVPVFQGYVPQHLICRLDVAGRHITNYLIKLMLLRGYPLNRTADFETARQIKEKWCYVAYDTAAERKLALETTILEEPYELPDGRIVRLGRERFEAPEALFDPNLIDVEGAGLSDM 281
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BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Match: H3G9P8_PHYRM (Uncharacterized protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3G9P8_PHYRM)

HSP 1 Score: 422 bits (1084), Expect = 3.230e-145
Identity = 199/274 (72.63%), Postives = 238/274 (86.86%), Query Frame = 1 
Query:   37 IVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEAFQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEEKLAINPSD-HKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTLYAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTLPDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM 855
            +VCDNGTGFVK G+A ENFP++IFPSLVGRP+LRAEEA Q  + LKDIM GD AAAVR++LE +YPV NGI++NWDDME+LW YTF+E+LAI+P D ++ILLTEPPLNP +NRE++VE MFEK+GF  C ++ QAMLTLYAQG+ TGVVVD+GDGV+HV+PVY G+VPQ+LI RLDVAGRH+T YLIKL+L RGYA NRTADFET RQ+KEK CYVA+D   ER+LA ETTVLEESY LPDGR+++LGRERFEAPE LFDP+L+DVE  GL DM
Sbjct:    8 VVCDNGTGFVKAGFAAENFPKAIFPSLVGRPVLRAEEAVQSDILLKDIMFGDEAAAVRSNLEITYPVENGIVKNWDDMEKLWDYTFKERLAIDPKDGYRILLTEPPLNPKRNREKLVETMFEKYGFDGCYINTQAMLTLYAQGITTGVVVDTGDGVTHVVPVYQGYVPQHLICRLDVAGRHITNYLIKLMLQRGYALNRTADFETARQMKEKWCYVAYDTAAERKLALETTVLEESYELPDGRIVRLGRERFEAPEALFDPNLIDVEGAGLSDM 281
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11716.1482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV64_ECTSI2.010e-20599.65Actin-related protein 2 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YLL4_9STRA1.420e-16582.44Actin-related protein 2 n=1 Tax=Tribonema minus Ta... [more]
A0A8J2WZI9_9STRA7.240e-15978.70Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U9K1_9STRA2.210e-14976.38Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
F0XXQ8_AURAN7.950e-14977.42Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
K3W8L9_GLOUD2.850e-14875.18Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A7S2FXL0_9STRA2.720e-14775.64Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8K1CC38_PYTOL5.880e-14774.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4C2W0_HYAAE1.190e-14571.90Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
H3G9P8_PHYRM3.230e-14572.63Uncharacterized protein n=23 Tax=Peronosporaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11716contigEcto-sp13_S_contig11716:214..1472 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score576.2
Seed ortholog evalue8.2e-162
Seed eggNOG ortholog2880.D7FV64
Preferred nameACTR2
Model size855
KEGG koko:K17260
KEGG Pathwayko04138,ko04530,map04138,map04530
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000147,GO:0000166,GO:0000280,GO:0000323,GO:0000902,GO:0000904,GO:0000910,GO:0001667,GO:0001775,GO:0002009,GO:0002102,GO:0002252,GO:0002253,GO:0002262,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002444,GO:0002446,GO:0002520,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003006,GO:0003008,GO:0003674,GO:0003824,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005856,GO:0005884,GO:0005885,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006955,GO:0006970,GO:0006972,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007017,GO:0007018,GO:0007049,GO:0007059,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007369,GO:0007399,GO:0007610,GO:0007611,GO:0007612,GO:0008064,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008154,GO:0008306,GO:0008356,GO:0008582,GO:0009267,GO:0009272,GO:0009605,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009790,GO:0009825,GO:0009888,GO:0009987,GO:0009991,GO:0010026,GO:0010033,GO:0010035,GO:0010038,GO:0010090,GO:0010243,GO:0010631,GO:0010638,GO:0010720,GO:0010769,GO:0010770,GO:0010927,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0014069,GO:0014070,GO:0015629,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016331,GO:0016344,GO:0016462,GO:0016477,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019953,GO:0022008,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030041,GO:0030097,GO:0030099,GO:0030139,GO:0030141,GO:0030154,GO:0030175,GO:0030218,GO:0030435,GO:0030437,GO:0030476,GO:0030478,GO:0030479,GO:0030554,GO:0030587,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031090,GO:0031143,GO:0031152,GO:0031252,GO:0031334,GO:0031344,GO:0031346,GO:0031410,GO:0031505,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031982,GO:0031983,GO:0032060,GO:0032258,GO:0032271,GO:0032273,GO:0032279,GO:0032501,GO:0032502,GO:0032505,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033206,GO:0033365,GO:0033554,GO:0034097,GO:0034101,GO:0034293,GO:0034314,GO:0034341,GO:0034613,GO:0034622,GO:0034774,GO:0035162,GO:0035578,GO:0035639,GO:0035902,GO:0035983,GO:0035984,GO:0036094,GO:0036230,GO:0038093,GO:0038094,GO:0038096,GO:0040007,GO:0040008,GO:0040011,GO:0042119,GO:0042221,GO:0042244,GO:0042330,GO:0042493,GO:0042546,GO:0042582,GO:0042592,GO:0042594,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043299,GO:0043312,GO:0043327,GO:0043933,GO:0043934,GO:0043935,GO:0044085,GO:0044087,GO:0044089,GO:0044396,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044464,GO:0044703,GO:0044764,GO:0044782,GO:0045010,GO:0045055,GO:0045087,GO:0045132,GO:0045202,GO:0045229,GO:0045321,GO:0045335,GO:0045471,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045887,GO:0045927,GO:0046677,GO:0046689,GO:0046903,GO:0046907,GO:0048013,GO:0048285,GO:0048308,GO:0048311,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048638,GO:0048639,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048814,GO:0048856,GO:0048869,GO:0048870,GO:0048872,GO:0050000,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050877,GO:0050890,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051258,GO:0051301,GO:0051303,GO:0051305,GO:0051321,GO:0051489,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051653,GO:0051654,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0060205,GO:0060215,GO:0060271,GO:0060284,GO:0060319,GO:0060429,GO:0060491,GO:0060998,GO:0060999,GO:0061001,GO:0061003,GO:0061024,GO:0061640,GO:0061645,GO:0061825,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070590,GO:0070591,GO:0070726,GO:0070727,GO:0070887,GO:0070925,GO:0071236,GO:0071310,GO:0071345,GO:0071346,GO:0071407,GO:0071417,GO:0071437,GO:0071495,GO:0071496,GO:0071554,GO:0071555,GO:0071840,GO:0071852,GO:0071940,GO:0071944,GO:0072553,GO:0072665,GO:0090066,GO:0090130,GO:0090132,GO:0090558,GO:0090626,GO:0090702,GO:0097159,GO:0097305,GO:0097367,GO:0097435,GO:0097458,GO:0097708,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098794,GO:0098805,GO:0098813,GO:0098858,GO:0098984,GO:0099080,GO:0099081,GO:0099120,GO:0099172,GO:0099175,GO:0099503,GO:0099512,GO:0099513,GO:0099568,GO:0099572,GO:0101002,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0140013,GO:1900006,GO:1901265,GO:1901363,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902903,GO:1902905,GO:1903046,GO:1904396,GO:1904398,GO:1904813,GO:2000026
Exons2
EggNOG free text desc.cytoskeleton organization
EggNOG OGsCOG5277@1,KOG0677@2759
Ec32 ortholog descriptionactin-related protein 2
Ec32 orthologEc-12_007380.1
Cds size855
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462616.9707348-CDS-Ecto-sp13_S_contig11716:213..2821681462616.9707348-CDS-Ecto-sp13_S_contig11716:213..282Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11716 214..282 +
1681462616.9830527-CDS-Ecto-sp13_S_contig11716:686..14721681462616.9830527-CDS-Ecto-sp13_S_contig11716:686..1472Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11716 687..1472 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11716.1482.1prot_Ecto-sp13_S_contig11716.1482.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11716 214..1472 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11716.1482.1

>prot_Ecto-sp13_S_contig11716.1482.1 ID=prot_Ecto-sp13_S_contig11716.1482.1|Name=mRNA_Ecto-sp13_S_contig11716.1482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=285bp
MTSTKFLEDMPGIVCDNGTGFVKVGYAGENFPRSIFPSLVGRPILRAEEA
FQEGVELKDIMCGDAAAAVRASLETSYPVTNGIIQNWDDMEELWKYTFEE
KLAINPSDHKILLTEPPLNPTKNREQMVERMFEKFGFGACNVSIQAMLTL
YAQGLLTGVVVDSGDGVSHVIPVYDGFVPQNLIRRLDVAGRHLTRYLIKL
LLLRGYAFNRTADFETIRQIKEKLCYVAHDIGMERRLAQETTVLEESYTL
PDGRVIKLGRERFEAPEPLFDPSLVDVEAPGLGDM
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mRNA from alignment at Ecto-sp13_S_contig11716:214..1472+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11716.1482.1 ID=mRNA_Ecto-sp13_S_contig11716.1482.1|Name=mRNA_Ecto-sp13_S_contig11716.1482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1259bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11716:214..1472+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACTTCAACAAAGTTCCTGGAAGACATGCCAGGGATTGTTTGCGACAA
CGGCACCGGGTTCGTGAAGGTGAGCAACATACAGCAACTTCCCCACGCTA
CCGCCAACAGCTGTGCCTGCTTTCTTTTGGGACGGGAATGTTCCCTAGAG
ACAATGGAGGGGGTTGGCTGAGATAACCAGACGGAGGTGGCTGCAATTAG
GTTGTGTTGTCCATGAAGCAGGGGTTGCCGCACCCCGCGGTAACCTTCAC
GTCCTGCAACCTGCAAACATGCTGTGTTCTTCTTTGCGTCTACTTTATTC
AGTAGCATAATTGCAAATACTTGTCAGAAAGCATTGCGCAGCTCTGAACG
CCCAGCAGCCTCTTGACAATACAACTTGTGCTTTGCATGGATTTGTCGGT
TCTCTCGCATGCTCAGCTGAGTTGTGGTTGCCGTGCGTTCTCTTCCCAAA
ATGTTTGGATGCGCGTCACAAAGGTTGGATATGCCGGAGAAAACTTTCCG
CGGTCCATCTTCCCGTCGCTCGTGGGGAGACCGATTTTGCGTGCCGAAGA
AGCTTTCCAGGAGGGCGTAGAGCTGAAGGACATCATGTGTGGAGACGCTG
CGGCCGCCGTTCGCGCTTCGCTGGAGACCAGCTATCCCGTAACCAACGGT
ATCATCCAAAACTGGGACGATATGGAGGAGCTGTGGAAGTACACTTTCGA
AGAAAAACTGGCCATCAACCCGTCGGACCATAAGATTCTCCTCACGGAGC
CCCCGCTGAACCCAACCAAGAACCGCGAGCAGATGGTGGAGCGCATGTTC
GAGAAATTCGGTTTCGGGGCGTGCAACGTGTCAATCCAGGCCATGCTCAC
ACTATACGCGCAGGGCTTACTGACGGGGGTGGTGGTGGACAGCGGCGACG
GCGTCAGCCACGTCATCCCGGTGTACGACGGGTTTGTCCCGCAAAACCTG
ATTCGCCGATTGGACGTCGCCGGGCGCCACCTGACCAGGTATCTCATCAA
GCTGCTGCTACTTCGTGGGTATGCCTTCAACCGCACTGCCGACTTCGAAA
CCATCCGCCAAATCAAGGAGAAGCTGTGCTACGTGGCGCACGACATAGGA
ATGGAGCGCCGCTTGGCGCAGGAGACGACCGTTCTTGAGGAATCATACAC
GCTGCCCGACGGGCGAGTAATCAAGCTCGGGCGCGAGAGGTTTGAAGCCC
CAGAACCGCTGTTTGACCCAAGCCTCGTGGATGTGGAGGCGCCAGGTCTG
GGGGACATG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11716:214..1472+

>mRNA_Ecto-sp13_S_contig11716.1482.1 ID=mRNA_Ecto-sp13_S_contig11716.1482.1|Name=mRNA_Ecto-sp13_S_contig11716.1482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=855bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11716:214..1472+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACTTCAACAAAGTTCCTGGAAGACATGCCAGGGATTGTTTGCGACAA
CGGCACCGGGTTCGTGAAGGTTGGATATGCCGGAGAAAACTTTCCGCGGT
CCATCTTCCCGTCGCTCGTGGGGAGACCGATTTTGCGTGCCGAAGAAGCT
TTCCAGGAGGGCGTAGAGCTGAAGGACATCATGTGTGGAGACGCTGCGGC
CGCCGTTCGCGCTTCGCTGGAGACCAGCTATCCCGTAACCAACGGTATCA
TCCAAAACTGGGACGATATGGAGGAGCTGTGGAAGTACACTTTCGAAGAA
AAACTGGCCATCAACCCGTCGGACCATAAGATTCTCCTCACGGAGCCCCC
GCTGAACCCAACCAAGAACCGCGAGCAGATGGTGGAGCGCATGTTCGAGA
AATTCGGTTTCGGGGCGTGCAACGTGTCAATCCAGGCCATGCTCACACTA
TACGCGCAGGGCTTACTGACGGGGGTGGTGGTGGACAGCGGCGACGGCGT
CAGCCACGTCATCCCGGTGTACGACGGGTTTGTCCCGCAAAACCTGATTC
GCCGATTGGACGTCGCCGGGCGCCACCTGACCAGGTATCTCATCAAGCTG
CTGCTACTTCGTGGGTATGCCTTCAACCGCACTGCCGACTTCGAAACCAT
CCGCCAAATCAAGGAGAAGCTGTGCTACGTGGCGCACGACATAGGAATGG
AGCGCCGCTTGGCGCAGGAGACGACCGTTCTTGAGGAATCATACACGCTG
CCCGACGGGCGAGTAATCAAGCTCGGGCGCGAGAGGTTTGAAGCCCCAGA
ACCGCTGTTTGACCCAAGCCTCGTGGATGTGGAGGCGCCAGGTCTGGGGG
ACATG
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