mRNA_Ecto-sp13_S_contig11715.1481.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11715.1481.1
Unique NamemRNA_Ecto-sp13_S_contig11715.1481.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: D8LJT1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT1_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 3.200e-124
Identity = 174/181 (96.13%), Postives = 178/181 (98.34%), Query Frame = 1 
Query:    1 PHQKVDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSDTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEVES 543
            P  +VDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEV+HIRNSQAKKFLETMQDRVKVPYAELF GASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSDTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEV++
Sbjct:  222 PDDEVDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVSHIRNSQAKKFLETMQDRVKVPYAELFAGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSDTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEVKN 402
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: A0A835Z9A0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A0_9STRA)

HSP 1 Score: 265 bits (678), Expect = 8.600e-83
Identity = 129/182 (70.88%), Postives = 150/182 (82.42%), Query Frame = 1 
Query:    1 PHQKVDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSD-TNPDPDVSPGFEFDFESKPLCRVQLKKMILAEVES 543
            P ++VD PMTEHVVTRWYRPPELMLCPDGLY YAVDLWSVGCIFAELLGR PLFPG NF+DQLTLIFD+VGSP  HEVAHIRN+QA++FL++M  + K PYA LF  ASE AIDLLE LLVF PP RLSV +AL+HPYF  LR ++    DP V+ G EFDFES+P+ R+QLK++IL EV +
Sbjct:  195 PDEEVDDPMTEHVVTRWYRPPELMLCPDGLYTYAVDLWSVGCIFAELLGRAPLFPGTNFVDQLTLIFDVVGSPSQHEVAHIRNNQARRFLDSMAGKDKQPYAALFPQASEQAIDLLEHLLVFDPPKRLSVADALDHPYFDALRTTEGLREDPPVAVGLEFDFESQPMARLQLKQLILQEVST 376
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: A0A6H5K027_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K027_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 4.440e-81
Identity = 125/180 (69.44%), Postives = 147/180 (81.67%), Query Frame = 1 
Query:   10 KVDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLR-KSDTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEVESF 546
            +VD+PMTE  VTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAE+LGR P FPG++F  QL+LIFD VGSP+PHEVAHIRN +A +FLE+MQ RVKVP+A+L   AS  ++DLLEGLLVF PPCR S DEAL H YF PL  +    PDP+V+PGF+FDFES+P+ + QL+ MIL EV  F
Sbjct:  236 QVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASVASVDLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGFDFDFESEPMHQEQLRDMILQEVALF 415
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: D8LJT0_ECTSI (Mitogen-activated protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT0_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 5.340e-79
Identity = 123/180 (68.33%), Postives = 145/180 (80.56%), Query Frame = 1 
Query:   10 KVDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLR-KSDTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEVESF 546
            +VD+PMTE  VTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAE+LGR P FPG++F  QL+LIFD VGSP+PHEVAHIRN +A +FLE+MQ RVKVP+A+L   ASE ++ LLE LLVF PPCR S DEAL H YF PL  +    PDP+V+PG +FDFES+P+ + QL+ MIL EV  F
Sbjct:  181 QVDNPMTETAVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASLALLERLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAPGLDFDFESEPMHQEQLRNMILQEVALF 360
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: A0A7S3XUM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUM8_HETAK)

HSP 1 Score: 255 bits (651), Expect = 7.080e-79
Identity = 116/180 (64.44%), Postives = 151/180 (83.89%), Query Frame = 1 
Query:   16 DHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSDTNPDPDV-SPGFEFDFES-KPLCRVQLKKMILAEVESFQ 549
            + PMTEHVVTRWYRPPELMLCPDGLYG+ VD+WS GCIFAE+LGR PLFPGKNF+ QLTLIFD++G+P   +VAHIRNSQA+KFL+++ DR++VP+AELF GA+  A+DLLE  LVFHP  R+++DE L+HPYF PLR  +T  +P V S GFEFDFE+ + + R+Q+K++++ EV+SF+
Sbjct:  188 EEPMTEHVVTRWYRPPELMLCPDGLYGFDVDIWSSGCIFAEMLGRKPLFPGKNFVHQLTLIFDVIGAPDAEDVAHIRNSQARKFLDSVADRLRVPFAELFPGATAPAVDLLERFLVFHPANRMTIDECLDHPYFDPLRTGETPSEPPVMSSGFEFDFEADETITRLQMKQLVMREVDSFR 367
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: A0A4D9DEH4_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEH4_9STRA)

HSP 1 Score: 238 bits (607), Expect = 3.550e-67
Identity = 118/198 (59.60%), Postives = 144/198 (72.73%), Query Frame = 1 
Query:    1 PHQKVDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKS----------DTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEVESFQRAQRK 564
            P   ++ PMTEHVVTRWYRPPELMLCPDGLY YAVD+WSVGCIFAELLGR PLFPGKNF+ QLTLIFD++G+P+P EVAH+++SQAK+FL+++  + KVP+A LF  AS  A+ LL  LLVF P  RL+VD+AL H YF PLR S          D        P  +FDFE+  L + QLK+MI  EVESF+  +RK
Sbjct:  194 PDDSIEEPMTEHVVTRWYRPPELMLCPDGLYDYAVDMWSVGCIFAELLGRKPLFPGKNFVHQLTLIFDVIGAPRPQEVAHVKSSQAKRFLDSVAAKKKVPFATLFPEASREALSLLNSLLVFEPAHRLTVDQALGHKYFEPLRHSVQLQQQQLAADAAQAARPPPKLDFDFETGHLNKGQLKQMIQREVESFRVERRK 391
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: A0A7S2CNX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CNX5_9STRA)

HSP 1 Score: 202 bits (513), Expect = 6.960e-59
Identity = 96/184 (52.17%), Postives = 129/184 (70.11%), Query Frame = 1 
Query:   13 VDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSDTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEVESFQRAQRK 564
            V+  MT+HVVTRWYRPPELMLCPDG YG++VD+WS GCI AEL+ R PLFPGKNF+ QLTLIF+++G+P+   V+HI N QA KFL+++ ++ KV + +L++ A      LLE LLVF P  R+S  EAL   YF P  + +    P V P F FDFE+  L +  LK++IL E+ +FQ+  R+
Sbjct:  155 VEDQMTQHVVTRWYRPPELMLCPDGRYGFSVDMWSAGCIMAELIARKPLFPGKNFVHQLTLIFNIIGAPEKDNVSHITNKQAMKFLQSVSNKPKVMFRDLYSSAPSTVTSLLEELLVFEPVKRMSAQEALNDIYFAPF-EPEKETSPPVHPDFNFDFENGNLPKNALKRLILDEIAAFQKEARQ 337
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: A0A7S1XRS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRS6_9STRA)

HSP 1 Score: 206 bits (525), Expect = 2.510e-57
Identity = 106/196 (54.08%), Postives = 136/196 (69.39%), Query Frame = 1 
Query:    1 PHQKVDHPMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPL--RKSDTNPDPDVS------PGFEFDFESKPLCRVQLKKMILAEVESFQRAQRK 564
            P + V  PMTEHVVTRWYRPPELMLCPDGLY YAVDLWS GCI AELLGR PLFPGKNF+ QL LIFD++G+P+  EVAHIR+SQA++FL+T+Q++ +VP+A L+  +S  A DL+  LLVF    RL  D+A+ H +F PL   + D     D +       G +FDFE   + +  L++M+  E   F RA+RK
Sbjct:  218 PDEGVIDPMTEHVVTRWYRPPELMLCPDGLYTYAVDLWSCGCILAELLGRRPLFPGKNFVHQLQLIFDVIGAPRSEEVAHIRSSQARRFLQTVQEKRRVPFAVLYPNSSPAAHDLIGRLLVFDEKKRLGTDKAMAHSFFDPLVYGREDGGKMADAAYPRGRVSGLDFDFEEGRVSKSALRRMLHDEAHGF-RAERK 412
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: A0A8K1C7Z2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Z2_PYTOL)

HSP 1 Score: 204 bits (519), Expect = 6.890e-56
Identity = 95/178 (53.37%), Postives = 129/178 (72.47%), Query Frame = 1 
Query:   22 PMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSDTNPDPDVSPGFEFDFESKPLCRVQLKKMILAEVESFQRA 555
            PMTEHVVTRWYR PELML PDG Y  ++D+WSVGCIFAE+LGR  LFPGKNF+ QLTLIF+++G+P P     I++SQA++FL+++  + KVP+  LF  ASE A+DLLE LL F P  R+S  EAL+HP+ H + K     DP  S   +F F++K L +  L+ +++ EVE+F+R+
Sbjct:  232 PMTEHVVTRWYRAPELMLQPDGFYDQSIDMWSVGCIFAEILGRKALFPGKNFLHQLTLIFEVIGTPPPEMALKIKSSQAQRFLKSLGKKPKVPFRTLFPNASEDALDLLEKLLEFDPAKRISAHEALQHPFMHAIEKKYKGVDPHPSARVDFGFDTKKLNKNDLRALLIKEVETFRRS 409
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BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Match: A0A421FNC0_9STRA (Protein kinase domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FNC0_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.390e-55
Identity = 93/182 (51.10%), Postives = 126/182 (69.23%), Query Frame = 1 
Query:   22 PMTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSDTNPDPDVSPG----FEFDFESKPLCRVQLKKMILAEVESFQRA 555
            PMTEHVVTRWYR PELML PDGLY  +VD+WSVGCIFAE+LGR  LFPGKNF+ QLTLIFD++G+P P     I++SQA++FL ++  + KVP+  LF  ASE A+DLL+ LL F P  R+S  +AL HPY   + +   N    + P      +F F+SK L  + L+ +I+ EV++ +++
Sbjct:  218 PMTEHVVTRWYRAPELMLQPDGLYDQSVDMWSVGCIFAEILGRKALFPGKNFLHQLTLIFDVIGAPPPEATTRIQSSQAQRFLRSLDRKSKVPFRTLFPNASEAAVDLLDRLLEFDPAKRISAQDALAHPYMQDIERKYRNRSGGIDPPPLMRVDFSFDSKNLSNMDLRALIVKEVDNHRKS 399
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11715.1481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJT1_ECTSI3.200e-12496.13Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835Z9A0_9STRA8.600e-8370.88Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5K027_9PHAE4.440e-8169.44Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LJT0_ECTSI5.340e-7968.33Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
A0A7S3XUM8_HETAK7.080e-7964.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9DEH4_9STRA3.550e-6759.60Protein kinase domain-containing protein n=2 Tax=M... [more]
A0A7S2CNX5_9STRA6.960e-5952.17Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S1XRS6_9STRA2.510e-5754.08Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8K1C7Z2_PYTOL6.890e-5653.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A421FNC0_9STRA1.390e-5551.10Protein kinase domain-containing protein n=4 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11715contigEcto-sp13_S_contig11715:501..5221 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score364.8
Seed ortholog evalue4.2e-98
Seed eggNOG ortholog2880.D8LJT1
Preferred nameMPK11
Model size993
KEGG koko:K04371,ko:K08293,ko:K14512
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04075,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04075,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000165,GO:0000749,GO:0000750,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007186,GO:0008150,GO:0008152,GO:0009272,GO:0009653,GO:0009987,GO:0010033,GO:0010468,GO:0010927,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019236,GO:0019538,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022607,GO:0023014,GO:0023052,GO:0030154,GO:0030435,GO:0030437,GO:0030476,GO:0031136,GO:0031137,GO:0031139,GO:0031505,GO:0032005,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035556,GO:0036211,GO:0042173,GO:0042174,GO:0042221,GO:0042244,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043902,GO:0043934,GO:0043935,GO:0043937,GO:0043939,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045229,GO:0045595,GO:0045596,GO:0046777,GO:0046999,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051321,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0070590,GO:0070591,GO:0070726,GO:0070887,GO:0071310,GO:0071444,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071940,GO:0140096,GO:1901564,GO:1903046,GO:2000241,GO:2000243
Exons6
EggNOG free text desc.MAP kinase activity
EggNOG OGsKOG0660@1,KOG0660@2759
EC2.7.11.24
Cds size969
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11715.1481.1prot_Ecto-sp13_S_contig11715.1481.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11715 501..5197 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462616.885346-CDS-Ecto-sp13_S_contig11715:500..7831681462616.885346-CDS-Ecto-sp13_S_contig11715:500..783Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11715 501..783 -
1681462616.9000294-CDS-Ecto-sp13_S_contig11715:1553..17291681462616.9000294-CDS-Ecto-sp13_S_contig11715:1553..1729Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11715 1554..1729 -
1681462616.9094636-CDS-Ecto-sp13_S_contig11715:2466..25721681462616.9094636-CDS-Ecto-sp13_S_contig11715:2466..2572Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11715 2467..2572 -
1681462616.917914-CDS-Ecto-sp13_S_contig11715:3400..35341681462616.917914-CDS-Ecto-sp13_S_contig11715:3400..3534Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11715 3401..3534 -
1681462616.9263859-CDS-Ecto-sp13_S_contig11715:4154..42771681462616.9263859-CDS-Ecto-sp13_S_contig11715:4154..4277Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11715 4155..4277 -
1681462616.9348233-CDS-Ecto-sp13_S_contig11715:5050..51971681462616.9348233-CDS-Ecto-sp13_S_contig11715:5050..5197Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11715 5051..5197 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462616.9427655-UTR-Ecto-sp13_S_contig11715:5197..52211681462616.9427655-UTR-Ecto-sp13_S_contig11715:5197..5221Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11715 5198..5221 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11715.1481.1

>prot_Ecto-sp13_S_contig11715.1481.1 ID=prot_Ecto-sp13_S_contig11715.1481.1|Name=mRNA_Ecto-sp13_S_contig11715.1481.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp
MTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKN
FMDQLTLIFDLVGSPKPHEVAHIRNSQAKKFLETMQDRVKVPYAELFTGA
SEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSDTNPDPDVSPGFE
FDFESKPLCRVQLKKMILAEVESFQRAQRKRDRRARAAAAATASAAGGGA
SAAATAAGTNENNDNNLKECTSSNGSTNSVATSATASTSSTATASTAAAN
DNSYHRDYRTAEAAAVTAEDRLQDHQHLLRRSRRHAVAAAAVGEGRGSAG
MHRGEGGGGELERAPISAVRSAQ
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mRNA from alignment at Ecto-sp13_S_contig11715:501..5221-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11715.1481.1 ID=mRNA_Ecto-sp13_S_contig11715.1481.1|Name=mRNA_Ecto-sp13_S_contig11715.1481.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4721bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11715:501..5221- (Ectocarpus species13 EcNAP12_S_4_19m)
CCACACCAAAAGGTTGACCACCCCATGACCGAGCACGTGGTAACCCGCTG
GTACCGCCCCCCCGAGCTGATGCTTTGCCCCGACGGCCTGTATGGCTACG
CGGTGGACCTGTGGAGCGTCGGCTGCATATTCGCCGAGCTTCTGGGCCGC
CACCCACTCTTTCCCGGAAAGGTGTGTGCGTTACCTTACCACCATGTAGC
ACCCCCGGCAGACACCCTGTCCTCCCGTCTCGAAACCAAAACGTTTGTGC
AGGCAGTAGGCAAATTGACGAAGAAAAGTTGGCCTACCGTACTTGACGGG
CTAGTCTTACGTTCCGTTCCGGTTTCAGTGCACGTGCGACCTGACGAAGA
CGTCTTCAAGATCTGTCCCAGCATGGTTACTGTCGATAGACTTACCCGCA
CAGAATGAAATGGCCCGTATGCGCGGCCTACACCGTAACCGTTCGTTCCG
GCGAAACTTCAACGGTTGAAGAACAGTGCTTTTCGCAAGCCTGTGTCAAA
CAACAGTTTCAGTGGTACAGCATTATTCAAAGTTCGAAAATATCGTCTTG
AAAGCTACCACCAACATTTCCCCCGGGCTCCGACAGGTGGTTGACTTTTC
ATCGTAGCTTACGGTGCACCGGGACTTGGAATTTTCCTGCAACACACCGC
GGCATGTCCTTAGGCTTTCATAGTGATAATACCGGCCCAACCCCTCCTCT
GTCTTGAAGTCGTGGCGTCAAGCTTAAATCATAGCAACGTATTGTAACTA
GTTGCAGGCAAGAGTTAGCGATGACAAACAAGGCGTTCTGGCTTCCTCGC
CCTTTTATTTGGTGGTGATGTTGCGATCACTCTGAACCCTGCAGAGCTCA
ATCATGAAGAAGACTCCCGTCTGCCGCCCCTCTGCTGCCCGTTACCCTAT
GCTCGTCCCCTCTGTATTTCCTTGTGTTTTTTTGTTCTTTGCAGAACTTC
ATGGACCAGTTGACCCTCATCTTTGACCTAGTGGGGTCGCCAAAGCCCCA
CGAGGTGGCTCACATTCGTAACTCTCAGGCGAAGAAGTTCCTCGAGACAA
TGCAGGACAGAGTAAAGGTACCTCAATACGTGCAGGAAATCGTGTTCGAC
GTACAGTTGTTTTTGATAACTTGTAAAAAACATGAATATCTGCTTGGAAA
CTCGTTCATGGTTTTCAATTTGCCCTTTCTGTGCCGTTTTGTCTCTGATA
TATCTCGGGTGCACCTGTTGTACGGCCTTTCGTGTTTCTCTGTTGCTTCT
TTGTGCAGCGCACAAGGTATCAGTGCAGCCCTCTAGTCCTCTGATCACGC
ATGTTCCCGATGCGTTAGTTTGCCTTATTTGGTCAGTTCTTAGTTGCCCC
CACTTCCGAATCTGTAGCTTCAAGCACGCCCACTTCTGCACGACCCCATT
AGCGTATGCCGTCATAACAGCATCAAGAAGGCGGCACCAACGCCTTTGTA
AGCATGTGTATCTTTTGCTATTATATTTTCCAGCAGCTTTCCGTTTTGAC
GCGTCCCTGTCGTATCCTGAAGCGTCTCCCATTTGCGTTGTTTCCTTTTT
TCTGAAATAAGCGTGGTGCGCCCTTCGATGTCCTCGTCCCTCATTGATCT
CACATTGGGTATTTCAGCGTCTATTGACCTTATTTGTTCTTCGAGGTCAT
TGAGGGTCCATCGTTACGTTGTCTATTACCCGTTTAGGTGCCATACGCGG
AGCTGTTTACTGGTGCTTCTGAGCACGCTATCGACCTTTTGGAGGGACTG
CTTGTCTTCCATCCCCCCTGCCGACTCTCCGTGGACGAAGCTCTGGAACA
CCCCTACTTCCATCCACTCAGGTCCCGGTCCTTGCATTTTCATGTAGTCT
TGTAGGATCCGCAATCTTTCCTTGAAGAGTGCAGAATTCGGGGTAGTTCG
TAGAGGCCAGATTGGGCTGTGATTATGAAGTCATCAACAAGAGATGAACT
GACAGGACATACAACGAAATGCGGCGGTAACTGCCATATCCCATGAAGGG
CACTGGCGACAATGGTGGTCGATAGTACGACCGCAGAAGCAGTGGGAAAC
AAGAAGCACCTCTAAGAGCGCTCTATCAGGAGCAAAAAAGTACGTCACCA
CGACACCCATTAACTCAAACCTTGAACCGATACTCAATACGGTATCCGGG
TTTCAGACTTGTCGGCAGGACCTTTCGGGGATTATTTTATTCCAAAACGC
ATGCCGTACATGGACTTTGAGAATCGAACACCGCACCGGGGTGATCGTAC
CCCGTCGGCCTCTCTCATCGAATGTTGTGCCTCGGTCCTTTCTTTTCTTT
CACATTCCACGCCTTTTGTCAAGGTATACCCACCGCGCGCATGTCCGTGC
CTTTTGATGTCTCCTTTGCATGGGTAATAGCCCATATCCCTGCGCCGAAT
CTTCATCCTGCCTGAGACAGGAAACACCACTTAACCCCGACCTCGCTCGG
CTAAACTTCTAACATACCGCACGTCTTGCGCTAGCCCTACGTGTTCCCCA
CCAAGAAACGGGACACCAGTCCCAACCCGGAAATACGACTGCGATATGTT
TATCTCGATCCAGCCCCAACCTTTACCCCAAGCACTTTTGGCCCCGTCTC
TAACCATAAAGCTGTACCATACTCCTGCCTCTGTCCCTGTCCCTAACAGA
AAGAGCGACACCAACCCCGATCCAGACGTGTCGCCCGGGTTCGAGTTCGA
CTTCGAGAGCAAGCCGCTCTGCAGGGTACAGCTCAAGAAAATGATTCTAG
CAGAGGTGAAGAACCGCTCCAATAGCATGCGACACCACCTTGCTTTGATG
CCGAGTGAGGCCAGGGACAGGCACGGCTCTGCATGTTGCGCAGAATTGGT
ACACAAGTTTAGGCACTGAAAAATGCAATAGCCTGGAGCGCATGTCGAGG
GAGGAGGAAGGGGTGGGGCCCTACATGTAGTTTGAAATATGTTTAAATCG
CATGGAATCGTCTTCAATTTTGAGAGGGATTGAGAATTTCGCTCTGCTGG
GGCGGAGGTGTGACACGAAACAATAATGCTAGACGAGGTTGCAAGCGTCG
GCTTCAGAGAGCATATGGGTTTAGGTTCAAGGTTCTGGCTGGTGTGATGT
GATGGTGTATCGCGAAAGAGCAAGACGGAGAAGGTCAATCGACCGCTCAG
TAGTGCCCCAAGGGATGTAAGTGGGCTTCCGTAAAAGAGCCAGTCAGACA
TTAATTGGGCTAGAACCTATGATATGTTCGAGGCTGTAACTGCCAAGAGT
CGACGGGAAACGTTGGAACTCGTGTTGCGATGACTCCTCGACACGGTAGT
ATTGCTTTGTAGCAAGCTGGTTGTGTTGGTTCTGTGGTATGCTCATATGC
TTCATGTCCACGTTTGGCAGTGAAACTTATAACGAGCATCGAGAGGACTC
GGGTAGTTTGTTGTATAGAGATCGAAAAGGCTCAAGCCAAAAAATCACCA
AAAGACGACTGGCTGACCTGTTTGAAAACGGCATTGTTTCAGGTTGAGTC
GTTTCAGCGAGCGCAACGCAAACGGGACAGGCGAGCGCGCGCAGCGGCCG
CCGCCACCGCCTCCGCAGCGGGGGGAGGGGCATCAGCCGCCGCCACCGCC
GCGGGCACCAACGAAAACAACGACAACAACCTCAAAGAGTGCACCAGCAG
CAACGGCAGCACTAACAGGTGAGGTCATTTGCGCCCCCCCACCGGTGACG
TCTGCCCTATCCCACGTTCGTCCACCTTCACTTGGCGTTCGCAGTGCCCC
CAACAGATACAATGAAAGGGAGGTGTTATTCAACTCGCGCCGCTTTGATT
GATACATTATTGTTAGAGCAGAGCAAGCAGTAGCGTGCGTAAGAAACTTC
TATGATTGTATGGCGAATGCCGTTCATAGTTTTGATTTCGTCTACCCATG
CAATGCTAAACGCTTCCCACATGATAGCATTTTCTCCTACAAATGGAGTT
CAAGTGTTATGTGCAGAACCTGAAAGGCAGTTTCTACGAATGACAGTATG
CTACTGGAGTACAACACACGACGGGCGTGAGTAACGCACTTCATCTCGAT
CACGACTCCTTTTTGTTAGTCTCGACATCAGACCTGTGGTGCTCGGTTGA
CGAGGCTCGGCCACCGTAGCTGCGTCTTTTCTCTCTCTCTTTCTCCCTCT
TTCTCTCGCTCTCTCTCGCTCTCTCGAATCGTGGCGAAGCCAGGGTTCGT
GCTGCCGATTACCCTTCCACTCCGATACAGAAGTCCTTTAGATTTTGGTA
CTCAAGCGACAGCCACGTGCTAGGAGCAGTGTCACAGCAGACAGGGGTCG
GCGCCACAAACACGAAAGTCAGAGAAGTTGTCTCCATCCCAGGGATTTCC
AGATCCCGTCCTCCAGGCAGTGTGGACTCAGATTAACTCTCCCACATCCT
ATCCGTTTGGTCTGCTTCGCTCATGTCCCCAAATTCAGCGTCGCGACAAG
CGCGACGGCGTCCACATCTTCCACGGCTACCGCTTCCACCGCCGCTGCTA
ACGACAACAGCTACCATCGCGACTACCGCACTGCCGAAGCCGCTGCCGTA
ACGGCCGAAGATCGCCTCCAAGACCATCAGCATTTGCTGAGGAGATCCCG
GCGACATGCTGTCGCGGCGGCGGCAGTGGGAGAGGGGAGAGGGTCGGCTG
GCATGCACCGCGGCGAAGGAGGCGGGGGAGAATTGGAGCGAGCACCCATC
TCTGCGGTGCGCTCCGCACAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11715:501..5221-

>mRNA_Ecto-sp13_S_contig11715.1481.1 ID=mRNA_Ecto-sp13_S_contig11715.1481.1|Name=mRNA_Ecto-sp13_S_contig11715.1481.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=969bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11715:501..5221- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGACCGAGCACGTGGTAACCCGCTGGTACCGCCCCCCCGAGCTGATGCT
TTGCCCCGACGGCCTGTATGGCTACGCGGTGGACCTGTGGAGCGTCGGCT
GCATATTCGCCGAGCTTCTGGGCCGCCACCCACTCTTTCCCGGAAAGAAC
TTCATGGACCAGTTGACCCTCATCTTTGACCTAGTGGGGTCGCCAAAGCC
CCACGAGGTGGCTCACATTCGTAACTCTCAGGCGAAGAAGTTCCTCGAGA
CAATGCAGGACAGAGTAAAGGTGCCATACGCGGAGCTGTTTACTGGTGCT
TCTGAGCACGCTATCGACCTTTTGGAGGGACTGCTTGTCTTCCATCCCCC
CTGCCGACTCTCCGTGGACGAAGCTCTGGAACACCCCTACTTCCATCCAC
TCAGAAAGAGCGACACCAACCCCGATCCAGACGTGTCGCCCGGGTTCGAG
TTCGACTTCGAGAGCAAGCCGCTCTGCAGGGTACAGCTCAAGAAAATGAT
TCTAGCAGAGGTTGAGTCGTTTCAGCGAGCGCAACGCAAACGGGACAGGC
GAGCGCGCGCAGCGGCCGCCGCCACCGCCTCCGCAGCGGGGGGAGGGGCA
TCAGCCGCCGCCACCGCCGCGGGCACCAACGAAAACAACGACAACAACCT
CAAAGAGTGCACCAGCAGCAACGGCAGCACTAACAGCGTCGCGACAAGCG
CGACGGCGTCCACATCTTCCACGGCTACCGCTTCCACCGCCGCTGCTAAC
GACAACAGCTACCATCGCGACTACCGCACTGCCGAAGCCGCTGCCGTAAC
GGCCGAAGATCGCCTCCAAGACCATCAGCATTTGCTGAGGAGATCCCGGC
GACATGCTGTCGCGGCGGCGGCAGTGGGAGAGGGGAGAGGGTCGGCTGGC
ATGCACCGCGGCGAAGGAGGCGGGGGAGAATTGGAGCGAGCACCCATCTC
TGCGGTGCGCTCCGCACAG
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