mRNA_Ecto-sp13_S_contig11663.1444.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11663.1444.1
Unique NamemRNA_Ecto-sp13_S_contig11663.1444.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: D8LMW1_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW1_ECTSI)

HSP 1 Score: 677 bits (1747), Expect = 1.000e-231
Identity = 474/620 (76.45%), Postives = 482/620 (77.74%), Query Frame = 1 
Query:    4 GRGSNGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEELRREAGDVLARAEQAKAKTLHEDADGDGGEDDRLLPPSGAPPDVAPEAGAGWRAGSWDGEAIRPAFQSNVGVFLSGHQLRLGHRSLKT-------PSHVYTAV-PCFVSFWGRVVGGMRVSFGRRPRVRHSVSPPPVRATTYSXXXXXXXXXXSS--LPTSPRGMSASPAGXXXXXXXXXXXGRSYSMTPGGDGXXGMVRASTIGSSCSSSGGGAVPMRPAKLGLAVLGADHDLPSPAPPLQPQPLYLNGDDGSGRXXXXXXXXXXXXXXXXXXXXXXXXGRAGWGSSEASCSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXATVGAAVEGAAESVKKAARTSGLEHREAGGDGGGVDGEVSXXXXXXXXXXXXDKQQAAEAGRRKAGLVRQGSKLWNMMRWDSGGRVGGARDGGGDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDASEWQQTTNEGEGGGGAAGSTKGD 1833
            GRGSNGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEELRREAGDVLARAEQAKAK L ++ADGDGGEDDRLLPPSGAPPD AP AGAG RA SWDGEA RPAFQSN G+   G+ L L   S  T       P+ VY  + P  +           VSFGRR RVRHSVSP         XXXXXXXXXX    LPTSPR MS     XXXXXXXXXXX   YSMTPG   XX MVRASTIGSSC       VP RPAKLGLAVLGADHDLP                     XXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXX   GAAVEGAAES KKAARTSGLEHRE GG+GGGVDGEVS            DKQQA EAG RKAGLVRQGSKLWNMMRWDSGGR GGA DGG DPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDA EWQ TT EGEGGGGAAGSTKGD
Sbjct:   46 GRGSNGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEELRREAGDVLARAEQAKAKMLLQEADGDGGEDDRLLPPSGAPPDAAPGAGAGRRASSWDGEASRPAFQSNGGI---GYPL-LEDLSAATAPPVSPPPASVYQKLAPSALPRESSSXXXXEVSFGRRTRVRHSVSPXXXXXXXXXXXXXXXXXXXXXXXLPTSPRAMSXXXXXXXXXXXXXXXXXXXYSMTPGXXXXXXMVRASTIGSSCXXXXXXXVPPRPAKLGLAVLGADHDLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAAVEGAAESAKKAARTSGLEHREVGGNGGGVDGEVSEGKVQEQKEGEKDKQQAPEAGGRKAGLVRQGSKLWNMMRWDSGGRAGGAGDGGVDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDAGEWQHTTKEGEGGGGAAGSTKGD 661
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BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: A0A6H5KHE3_9PHAE (VASt domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE3_9PHAE)

HSP 1 Score: 653 bits (1684), Expect = 1.330e-221
Identity = 467/634 (73.66%), Postives = 476/634 (75.08%), Query Frame = 1 
Query:    1 QGRGSNGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEELRREAGDVLARAEQAKAKTLHEDADGDGGEDDRLLPPSGAPPDVAPEAGAGWRAGSWDGEAIRPAFQSNVGVFLSGHQLRLGHR------------SLKTPSHV--------YTAVPCFVSFWGRVVGGMRVSFGRRPRVRHSVSPPPVRATTYSXXXXXXXXXXSS---LPTSPRGMSASPAGXXXXXXXXXXXGRSYSMTPGGDGXXGMVRASTIGSSCSSSGGGA-VPMRPAKLGLAVLGADHDLPSPAPPLQPQPLYLNGDDGSGRXXXXXXXXXXXXXXXXXXXXXXXXGRAGWGSSEASCSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXATV-GAAVEGAAESVKKAARTSGLEHREAGGDGGGVDGEVSXXXXXXXXXXXXDKQQAAEAGRRKAGLVRQGSKLWNMMRWDSGGRVGGARDGGGDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDASEWQQTTNEGEGGGGAAGSTK 1827
            +GRGSNGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLE+LRREAGDVLARAEQAK KTL EDADGDGGE DR LPPSG   D A  +GAGWRA SWDGEA RP FQSNVGVFLSGHQ R   R            S  T S V            P  +           VSFGRRPRVRHSVSP         XXXXXXXXXX     LPTSPRGMSA+PA XXXXXXXXXX  RSYSMTPG   XX                    VP RPAKLGLAVLGADHD+P                     XXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXXXXXXXX  V GAAVEGAAES KKAARTSGLEHR+AGG+GGGVDGEVS             KQ AAEAG RKAGLVRQGSKLWNMMRWDSGGR GGA +GGGDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDASEWQQTT EGEGGGGA GSTK
Sbjct:   23 EGRGSNGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEDLRREAGDVLARAEQAKFKTLVEDADGDGGEGDRQLPPSGTSSDAAQGSGAGWRANSWDGEASRPGFQSNVGVFLSGHQ-RASWRPGGSGYPLVEDLSATTASPVSPPPASVSQKLAPSALPRESSSSSSSEVSFGRRPRVRHSVSPXXXXXXXXXXXXXXXXXXXXXXXXLPTSPRGMSAAPAXXXXXXXXXXX--RSYSMTPGXXXXXXXXXXXXXXXXXXXXXXXXXVPPRPAKLGLAVLGADHDMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGAAVEGAAESAKKAARTSGLEHRKAGGNGGGVDGEVSEGKAQEQAEGEKGKQLAAEAGGRKAGLVRQGSKLWNMMRWDSGGRAGGAGEGGGDPEADRKAMEEAISAGGDSHAEVATAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDASEWQQTTEEGEGGGGATGSTK 653
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: A0A8J2ST97_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST97_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.170e-24
Identity = 52/103 (50.49%), Postives = 76/103 (73.79%), Query Frame = 1 
Query:   46 ALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLL 354
            A R++I   IFGDVG + RDFSCA + K+++HGR+YVTER +CFY+N FG E K+ + +  V   +K N+A+FIPN + V   + K++VFR+FW+RD+C +LL
Sbjct:   44 AWRDEIVRTIFGDVGAIRRDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHVTCVTKENTAVFIPNAIAVIT-ARKEYVFRSFWDRDDCFNLL 145
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: A0A7S3NLX8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLX8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 4.350e-23
Identity = 52/124 (41.94%), Postives = 83/124 (66.94%), Query Frame = 1 
Query:   52 REDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEELRREAGDVLARAEQAKAKTLH 423
            R++I   IFGDVG + RDFSCA + K+++HGR+YVTER +CFY+N FG E K+ + +  +   +K  +A+FIPN + V   + K+++FR+FW+RDEC+ +L+++      V+    QA  +  H
Sbjct:  150 RDEIVRTIFGDVGAIRRDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSYITCITKEYTAVFIPNAIAVIT-ARKEYIFRSFWDRDECYDVLKQMHDMYRGVIETGPQAHIEEGH 272
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: W7TDU9_9STRA (Gram domain-containing protein 1a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDU9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.080e-21
Identity = 49/105 (46.67%), Postives = 76/105 (72.38%), Query Frame = 1 
Query:   31 TAEDLALREDICYQIFGD-VGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDEC 342
            T ED + R++I  QIFG+ +G +  D SCA + K+++HGR+Y+T++ +CFY+NFFG E K+ +    V   SKGN+A+ IPN +++Q   GK++ FR+FW+RDEC
Sbjct:   95 TPED-SFRDEIVRQIFGENLGCIRDDASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPFSQVRTLSKGNTALLIPNCIIIQTH-GKEYCFRSFWDRDEC 197
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BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: F0Y4G3_AURAN (GRAM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4G3_AURAN)

HSP 1 Score: 97.8 bits (242), Expect = 4.690e-21
Identity = 41/85 (48.24%), Postives = 62/85 (72.94%), Query Frame = 1 
Query:  100 RDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLL 354
            RDFSCA + K+++HGR+YVTER +CFY+N FG E K+ + +  +   +K  +A+FIPN + V   + K++VFR+FW+RD+C  LL
Sbjct:    1 RDFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPYSHITCITKEYTAVFIPNAIAVIT-ARKEYVFRSFWDRDDCFDLL 84
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: A0A7S2STC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STC3_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.780e-21
Identity = 47/103 (45.63%), Postives = 72/103 (69.90%), Query Frame = 1 
Query:   52 REDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEE 360
            R +I   IFGDVG + +DFSCA + K+++HGRMYVT++ +CFY+N FG E K+ + +  +A  +K  +A+FIPN + V     +++ FR+FW+RDE   LL+E
Sbjct:   27 RNEIVRTIFGDVGTIKKDFSCAVERKILLHGRMYVTDKFICFYSNLFGFEKKIKIPYSHIACVTKEYTAVFIPNAIAVITAK-REYFFRSFWDRDEAFHLLKE 128
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: A0A6H5L0Q2_9PHAE (VASt domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q2_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 6.230e-19
Identity = 46/122 (37.70%), Postives = 80/122 (65.57%), Query Frame = 1 
Query:   52 REDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEELRREAGDVLARAEQAKAKT 417
            REDI   IFG+VG  + DFSCA + ++++HGRMYVT   +CFY+N FG E  + +    +   +K  +A+FIPN + +   S K+++FR+FW+R++    L++ +++A + L + +Q  A++
Sbjct:   58 REDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIIT-SKKEYIFRSFWDREDAFKTLKQCQQDASNTLTQPQQHAAES 178
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: D7FKF6_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF6_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 7.130e-18
Identity = 44/114 (38.60%), Postives = 74/114 (64.91%), Query Frame = 1 
Query:   52 REDICYQIFGDVGPLIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLLEELRREAGDVLAR 393
            REDI   IFG+VG  + DFSCA + ++++HGRMYVT   +CFY+N FG E  + +    +   +K  +A+FIPN + +   S K+++FR+FW+R++    L++ +++A   L +
Sbjct:   19 REDIVRSIFGEVGKPVEDFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPFCHMRCITKEKTALFIPNAIAIIT-SKKEYIFRSFWDREDAFKTLKQCQQDASSTLTQ 131
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BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Match: UPI00096B58A2 (LOW QUALITY PROTEIN: GRAM domain-containing protein 1B-like n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B58A2)

HSP 1 Score: 84.7 bits (208), Expect = 2.100e-13
Identity = 39/98 (39.80%), Postives = 64/98 (65.31%), Query Frame = 1 
Query:   70 QIFGDVGP---LIRDFSCAWDHKVVMHGRMYVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSGKDFVFRAFWERDECHSLL 354
            +IF DV     L+ D+SCA   ++++HGR+YVT+  LCFYAN FG E  +S++ ++V   SK  +A+ IPN V++  ++ + F F +F  RD+ + +L
Sbjct:  133 RIFKDVPDDERLVVDYSCALQKEILVHGRLYVTQNYLCFYANIFGWETNVSMKWKEVTSISKEKTALVIPNAVLISTRADQKFFFTSFVARDKTYIML 230
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11663.1444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMW1_ECTSI1.000e-23176.45VASt domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KHE3_9PHAE1.330e-22173.66VASt domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8J2ST97_9STRA2.170e-2450.49Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3NLX8_9STRA4.350e-2341.94Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
W7TDU9_9STRA3.080e-2146.67Gram domain-containing protein 1a n=1 Tax=Nannochl... [more]
F0Y4G3_AURAN4.690e-2148.24GRAM domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S2STC3_9STRA8.780e-2145.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6H5L0Q2_9PHAE6.230e-1937.70VASt domain-containing protein (Fragment) n=1 Tax=... [more]
D7FKF6_ECTSI7.130e-1838.60VASt domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI00096B58A22.100e-1339.80LOW QUALITY PROTEIN: GRAM domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11663contigEcto-sp13_S_contig11663:1..5225 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score690.3
Seed ortholog evalue8.3e-196
Seed eggNOG ortholog2880.D8LMW1
Model size1833
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.intracellular sterol transport
EggNOG OGsKOG1032@1,KOG1032@2759
Ec32 ortholog descriptionGRAM domain
Ec32 orthologEc-02_003850.1
Cds size1833
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11663.1444.1prot_Ecto-sp13_S_contig11663.1444.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11663 1..5225 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462614.304338-CDS-Ecto-sp13_S_contig11663:0..781681462614.304338-CDS-Ecto-sp13_S_contig11663:0..78Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11663 1..78 -
1681462614.3167963-CDS-Ecto-sp13_S_contig11663:427..5441681462614.3167963-CDS-Ecto-sp13_S_contig11663:427..544Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11663 428..544 -
1681462614.339716-CDS-Ecto-sp13_S_contig11663:868..18131681462614.339716-CDS-Ecto-sp13_S_contig11663:868..1813Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11663 869..1813 -
1681462614.3529851-CDS-Ecto-sp13_S_contig11663:3028..34181681462614.3529851-CDS-Ecto-sp13_S_contig11663:3028..3418Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11663 3029..3418 -
1681462614.3632922-CDS-Ecto-sp13_S_contig11663:3877..39621681462614.3632922-CDS-Ecto-sp13_S_contig11663:3877..3962Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11663 3878..3962 -
1681462614.3724315-CDS-Ecto-sp13_S_contig11663:4682..47971681462614.3724315-CDS-Ecto-sp13_S_contig11663:4682..4797Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11663 4683..4797 -
1681462614.38192-CDS-Ecto-sp13_S_contig11663:5122..52251681462614.38192-CDS-Ecto-sp13_S_contig11663:5122..5225Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11663 5123..5225 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11663.1444.1

>prot_Ecto-sp13_S_contig11663.1444.1 ID=prot_Ecto-sp13_S_contig11663.1444.1|Name=mRNA_Ecto-sp13_S_contig11663.1444.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=611bp
QGRGSNGVAVTAEDLALREDICYQIFGDVGPLIRDFSCAWDHKVVMHGRM
YVTERRLCFYANFFGLEAKMSLRHEDVARCSKGNSAIFIPNVVVVQDKSG
KDFVFRAFWERDECHSLLEELRREAGDVLARAEQAKAKTLHEDADGDGGE
DDRLLPPSGAPPDVAPEAGAGWRAGSWDGEAIRPAFQSNVGVFLSGHQLR
LGHRSLKTPSHVYTAVPCFVSFWGRVVGGMRVSFGRRPRVRHSVSPPPVR
ATTYSSGGGGGASGSSSLPTSPRGMSASPAGAGAGAAATTARGRSYSMTP
GGDGGGGMVRASTIGSSCSSSGGGAVPMRPAKLGLAVLGADHDLPSPAPP
LQPQPLYLNGDDGSGRRQQRQQRQGQQRPPPLTTAVITGGGRAGWGSSEA
SCSSGTGTPRGQQQQHDGDGHAPAKGVGAAAAATVGAAVEGAAESVKKAA
RTSGLEHREAGGDGGGVDGEVSEGKAREKKAGERDKQQAAEAGRRKAGLV
RQGSKLWNMMRWDSGGRVGGARDGGGDPEADRKAMEEAISAGGDSHAEVA
TAEFDVSVKEFYERFVADDAPYSLPDFHMSRGDWEVDASEWQQTTNEGEG
GGGAAGSTKGD
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mRNA from alignment at Ecto-sp13_S_contig11663:1..5225-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11663.1444.1 ID=mRNA_Ecto-sp13_S_contig11663.1444.1|Name=mRNA_Ecto-sp13_S_contig11663.1444.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11663:1..5225- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGTCGAGGAAGCAATGGCGTGGCGGTAACTGCGGAGGACCTTGCCCT
TCGGGAGGACATCTGCTACCAGATCTTCGGAGATGTCGGACCGCTGATCA
GGGGTGAGTTGGCCTCAACAGCAACTCTTCGAACCCACCATCACACACCG
GTAATCGGCGCACAGAATTGTTGTTGCCTGTCGCGTTCAGTGTAGATGTT
GTCTCGCTGAAAAATACTGCTGTTATGACAGTCCTCTTGACACCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCGCCTTCTCCTCGGTCGTGGCTCCGGTAC
CTTTGCCGCTCTTGATGCTGCTGGTGCGTTGCCGGCTCGCTGTCTTCTGC
GCCCTTCGTCGGCGGCGGCGTCGCCCAGACTTCTCGTGCGCGTGGGACCA
CAAGGTGGTGATGCACGGCCGGATGTACGTGACCGAGCGAAGGCTGTGCT
TCTACGCCAACTTTTTCGGGCTGGAGGCGAAGATGTCCTTGAGGTGCGGC
GGGCGTGTGGGAAAATTGTCGAAAACAGTAGAGGCACCACTGACCACCAA
CGATAACAAACGTCGGGGTTGAAGAGGAGAGAAGCGAAGTGTGTGCTGCG
CTTTTTAGGACTGTGTCGGGGTTTGTGTGGCAGTTAGGTGACATCAGGCA
TTCGACGGAATCAAGCGTCGGGGGTGGAGAGGAGAACGGCGGTGCAGGTG
TGTTCGCTTTTTGAATTCGGAAGGCGGGGTTTTTACGATGCGAAAGCGGC
ATTCCCAACCGTAGGAGGAAGGGTTGACGTTTCGTTAGGGTCTTGCGCAA
AACGAAATCAACCACAAAGTTGGTTGGGGGGGGAGGTGCCGGAAATACTC
GGGAGGTCCATCTGTATCGGTGGTGCAGTGTAAAGAGTGCCTTCGTCAAG
CACCGGTGGTCATGCATACCTACCCCTCGTCAGTAGTAGTGGTTGAATTT
ACGTCACCCCTCTCCTTGTGCTCACCTTTCTTCTCTTGGAACTCGAACGC
TAATTTGTTGCGTCCAAGAAACACAACAATGTTACATCTCCATTCACAGA
TACAGAGTTCAAGATAAACTGCTAGCAATGGCCTTTCTAGTTTGGTCCCG
CCTGTCTCACATAGGTTTCCTCTGTTCTCCTTGCCCCTCTCGCTCAATCA
GTTCCCCTTTTGTCTTTTTGGTGTTTCACTTTTGGCCGCTCTTTCCGCCC
GTGACGACAACAGGCACGAAGATGTCGCGAGGTGCAGCAAAGGCAACTCA
GCGATCTTCATCCCCAACGTCGTCGTCGTGCAGGACAAATCCGGAAAGGT
ATCTAAAGAGTCTATCGGATACGTGTCGGGGGGGAATGAAAAAAATCTGT
GGAAATTTATGCTTCCTTGCACACATAAGCTCCTCTTGGTAGATCTGGAC
TGATGTACTGCTGTAGGGCTGCCCCCACTGACGGCAGTTTTATGTGCCAT
GGCGTCTTGTCGAGGGGATATCTTCACGGAACCCCTGCACCCACTCCCGG
TGGCCTTCCTCTGTCTTGTCTCTCTCTCTATCCCGTCTGTCTCTGTCTCG
GTCTCTCTCGACCCCTCTCTTTGCCTCTCTCTCTCTCCCCCCCCACCCGT
ACTCACCGCGCCACTTCGCAACCTTCCATCCGATTCTCTCCCTCTCACGT
ATGCCGCCCAATCTTTGGATCGAACGGGGCGGATCGCGGGCGCCGCACGT
GACAACCGCGCAACCAACAATAAAACAACACCAACAACAACACCACCACG
TCGAAAGGACTTCGTCTTCCGAGCGTTCTGGGAGAGGGACGAGTGCCACA
GCCTGCTGGAAGAGCTGAGGCGCGAGGCGGGAGATGTCCTTGCCCGGGCA
GAACAAGCCAAGGCCAAGACGCTGCACGAGGACGCCGACGGGGACGGCGG
GGAAGACGACCGCCTGTTGCCGCCATCGGGGGCTCCGCCAGATGTGGCGC
CGGAGGCGGGGGCGGGGTGGAGGGCTGGTAGCTGGGACGGGGAGGCGATC
CGGCCGGCTTTCCAGAGCAATGTGGGTGTGTTTTTGTCAGGACACCAGCT
GCGTCTTGGTCACCGGTCCTTGAAGACACCCTCGCATGTGTACACTGCGG
TGCCGTGTTTTGTTTCATTTTGGGGGAGAGTGGTAGGGGGCATGCGGGTG
CAGTGTCGCCACGTCTTATTGGGGGAGGGGGGTGGATCTGCGAGCGTTGC
AGCCTTTGCAGCTTGAAAAGCGGTTGCTACCGTGAGGCGTGCGAATCGCC
GCCCCATTGCGCACACGGCATGTGTGATGGAATGCGCTGTCTTGTGTACT
GATTGCATGGCGTAGACACGGGGGGGGGGATGGTGGTCATGACCTATCAT
TTCATCGACGTCCTCTTTTTTGCCCACGGTGAGCGCGCCTGTTCGATGCT
GAGAGTCTTGTTGCCGTGGTGTGGGGGAGTGTTATGACCGCCGTGGCGTA
CGCTGCCTTTGGTTGGCGGGCACATAGTGCAACGCTGTGTGATGATGATG
ATGACGCCATCGATGCCTTCGTGTGTGTTTTTTGTCGGTTGCTGTCGGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGATGATGGGTGT
ACCATGCCACAGGTTAGCTTCGGCAGGAGACCGCGCGTCAGGCACTCCGT
GTCGCCGCCGCCGGTGCGGGCCACCACCTACTCCTCCGGCGGCGGCGGCG
GAGCATCGGGCTCTTCATCGCTCCCGACCTCCCCGAGAGGGATGTCCGCC
TCCCCCGCCGGCGCCGGCGCCGGCGCGGCGGCCACCACCGCGAGGGGAAG
ATCTTACTCGATGACCCCGGGGGGAGACGGCGGCGGAGGCATGGTCAGGG
CCTCGACGATCGGCAGCAGCTGTAGCAGCAGCGGCGGCGGGGCGGTTCCC
ATGAGGCCGGCCAAGCTCGGCCTGGCGGTTTTGGGGGCTGATCACGACCT
GCCTTCCCCAGCGCCGCCGCTGCAGCCGCAGCCGCTTTACCTGAACGGGG
ACGACGGTAGTGGGCGGCGGCAGCAGCGGCAACAGCGGCAGGGACAACAA
CGGCCGCCGCCCCTCACGACGGCGGTGATCACGGGGGGCGGGCGGGCGGG
GTGGGGTTCCTCGGAGGCGTCGTGCTCGTCGGGGACGGGGACGCCGAGAG
GACAGCAACAGCAGCATGACGGCGACGGCCACGCTCCCGCGAAAGGGGTT
GGAGCGGCGGCGGCAGCCACAGTGGGAGCTGCGGTCGAGGGTGCGGCGGA
GTCTGTGAAGAAAGCGGCTCGGACGAGCGGTTTGGAGCACCGGGAGGCCG
GCGGCGACGGCGGCGGTGTTGATGGAGAGGTCTCGGAAGGGAAAGCACGG
GAGAAAAAGGCGGGGGAAAGGGACAAGCAGCAGGCGGCGGAGGCTGGCCG
GCGCAAAGCGGGCCTTGTCAGGCAGGGGTCCAAGCTGTGGAACATGATGC
GGTGGGACAGCGGGGGGCGGGTGGGCGGGGCGAGAGACGGGGGGGGAGAC
CCGGAGGCCGACAGGAAGGCGATGGAGGAAGCTATTTCCGCGGGAGGCGA
TAGTCACGTGAGAAAGAGGGAGGCGGGCGGTGGACAGCATCCTGATTTTT
CCGCCCTCTCACTTTCAACCACATTTTCTCTGTATGCATGGCGCGTACGT
TGTCAGGCTCTTACCGGAGCTTTGAGAGTAAAAGTGCCACTTTCGTTTTC
TAGTGTTGTTGCCCTACCAATACATGAGCAGTATGCAAACGTTGAAGTTC
CTGCCCGAATCCCCCCCCACTCCCCCCCTCTCGGTCCTCTCGAGGACGCG
TGGTCAATGCTCTGTCAACTAAGGTATGCAAAACATGAATTCATCCCTCT
CTTGTCTCGTTCTTTTTGTTTTTCACTCTAGGCGGAGGTAGCGACGGCAG
AGTTTGACGTCTCCGTGAAGGAGTTCTACGAGAGGTTTGTCGCCGACGAC
GCCCCTTACAGTTTACCGGACTTTCACATGAGCCGAGGCGACTGGGAGGT
GAGCTTTTGTTTTTTTCCTTCTTGTTTTTCTGATTCCTGCCCCTGTTCAT
GTTGAGGTCTGTTTATTTGTTTGCTTAGGACAGGGATTGGCTTGGTTGGT
CGTTGTGGGGATGAGAGGGCATGGCGTGCAAAATCGCGTCGTGTTTTGTC
CGTGGCCCCACGCACACGAATCAGCGGACGTGTGGATGCTGACGAACTTG
GATGTAGCGAAACGTTTCGACACGCACGACTAACGTTACCACCTCCGGCC
TTATACGTTGGTGAACGAAGCCTTTCAAAACAACGAGGACGGTTATCACA
ACATTTCACCACCACAAAGACGCCAAACGACGATTATTTACCAACAGGTG
GACGCTAGTGAATGGCAGCAGACGACAAACGAAGGAGAAGGAGGGGGAGG
AGCCGCGGGTTCAACGAAAGGAGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11663:1..5225-

>mRNA_Ecto-sp13_S_contig11663.1444.1 ID=mRNA_Ecto-sp13_S_contig11663.1444.1|Name=mRNA_Ecto-sp13_S_contig11663.1444.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1833bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11663:1..5225- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGGTCGAGGAAGCAATGGCGTGGCGGTAACTGCGGAGGACCTTGCCCT
TCGGGAGGACATCTGCTACCAGATCTTCGGAGATGTCGGACCGCTGATCA
GGGACTTCTCGTGCGCGTGGGACCACAAGGTGGTGATGCACGGCCGGATG
TACGTGACCGAGCGAAGGCTGTGCTTCTACGCCAACTTTTTCGGGCTGGA
GGCGAAGATGTCCTTGAGGCACGAAGATGTCGCGAGGTGCAGCAAAGGCA
ACTCAGCGATCTTCATCCCCAACGTCGTCGTCGTGCAGGACAAATCCGGA
AAGGACTTCGTCTTCCGAGCGTTCTGGGAGAGGGACGAGTGCCACAGCCT
GCTGGAAGAGCTGAGGCGCGAGGCGGGAGATGTCCTTGCCCGGGCAGAAC
AAGCCAAGGCCAAGACGCTGCACGAGGACGCCGACGGGGACGGCGGGGAA
GACGACCGCCTGTTGCCGCCATCGGGGGCTCCGCCAGATGTGGCGCCGGA
GGCGGGGGCGGGGTGGAGGGCTGGTAGCTGGGACGGGGAGGCGATCCGGC
CGGCTTTCCAGAGCAATGTGGGTGTGTTTTTGTCAGGACACCAGCTGCGT
CTTGGTCACCGGTCCTTGAAGACACCCTCGCATGTGTACACTGCGGTGCC
GTGTTTTGTTTCATTTTGGGGGAGAGTGGTAGGGGGCATGCGGGTTAGCT
TCGGCAGGAGACCGCGCGTCAGGCACTCCGTGTCGCCGCCGCCGGTGCGG
GCCACCACCTACTCCTCCGGCGGCGGCGGCGGAGCATCGGGCTCTTCATC
GCTCCCGACCTCCCCGAGAGGGATGTCCGCCTCCCCCGCCGGCGCCGGCG
CCGGCGCGGCGGCCACCACCGCGAGGGGAAGATCTTACTCGATGACCCCG
GGGGGAGACGGCGGCGGAGGCATGGTCAGGGCCTCGACGATCGGCAGCAG
CTGTAGCAGCAGCGGCGGCGGGGCGGTTCCCATGAGGCCGGCCAAGCTCG
GCCTGGCGGTTTTGGGGGCTGATCACGACCTGCCTTCCCCAGCGCCGCCG
CTGCAGCCGCAGCCGCTTTACCTGAACGGGGACGACGGTAGTGGGCGGCG
GCAGCAGCGGCAACAGCGGCAGGGACAACAACGGCCGCCGCCCCTCACGA
CGGCGGTGATCACGGGGGGCGGGCGGGCGGGGTGGGGTTCCTCGGAGGCG
TCGTGCTCGTCGGGGACGGGGACGCCGAGAGGACAGCAACAGCAGCATGA
CGGCGACGGCCACGCTCCCGCGAAAGGGGTTGGAGCGGCGGCGGCAGCCA
CAGTGGGAGCTGCGGTCGAGGGTGCGGCGGAGTCTGTGAAGAAAGCGGCT
CGGACGAGCGGTTTGGAGCACCGGGAGGCCGGCGGCGACGGCGGCGGTGT
TGATGGAGAGGTCTCGGAAGGGAAAGCACGGGAGAAAAAGGCGGGGGAAA
GGGACAAGCAGCAGGCGGCGGAGGCTGGCCGGCGCAAAGCGGGCCTTGTC
AGGCAGGGGTCCAAGCTGTGGAACATGATGCGGTGGGACAGCGGGGGGCG
GGTGGGCGGGGCGAGAGACGGGGGGGGAGACCCGGAGGCCGACAGGAAGG
CGATGGAGGAAGCTATTTCCGCGGGAGGCGATAGTCACGCGGAGGTAGCG
ACGGCAGAGTTTGACGTCTCCGTGAAGGAGTTCTACGAGAGGTTTGTCGC
CGACGACGCCCCTTACAGTTTACCGGACTTTCACATGAGCCGAGGCGACT
GGGAGGTGGACGCTAGTGAATGGCAGCAGACGACAAACGAAGGAGAAGGA
GGGGGAGGAGCCGCGGGTTCAACGAAAGGAGAT
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