mRNA_Ecto-sp13_S_contig11642.1426.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A6H5LMQ8_9PHAE (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LMQ8_9PHAE) HSP 1 Score: 481 bits (1239), Expect = 1.940e-165 Identity = 239/258 (92.64%), Postives = 248/258 (96.12%), Query Frame = 1
Query: 1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGSFLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKK---SGKHVLLGSCKASVNDLKSKADSGVQNLILDKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGA++GKG SPKVVVRAEEVANSNALAEITLAGSN+GHGSFLRISRL EQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAF+WKK SG HVLLGSCKASVND+KSKADSG QNL+LDKG+GSITV SCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPG+LHYHDPTGHTNNE G A+
Sbjct: 103 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGARRGKGDSPKVVVRAEEVANSNALAEITLAGSNIGHGSFLRISRLSEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFTWKKRVLSGNHVLLGSCKASVNDIKSKADSGSQNLMLDKGQGSITVSSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGSLHYHDPTGHTNNEYGQAI 360
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: D7FXN1_ECTSI (Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN1_ECTSI) HSP 1 Score: 440 bits (1131), Expect = 5.400e-150 Identity = 215/255 (84.31%), Postives = 234/255 (91.76%), Query Frame = 1
Query: 1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGSFLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLILDKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
TFKFEEVQTLRFEVYDVDTAYSSSDAT IDPSKQDFQGAAEC LAQV+GGRDQTWEGLLSGAK GKGGSPKVVVRAEEVANSN LAEITLAGSN+G G FLR+SR+ E+GPPI CFKTEVAKGSPPRPWAPI+ISL+VLANGDPYRPL+IEAF+WKKSG H LLGSCKASVNDLKS A++G+QNL+LDKG +ITVRSC +TPQP+FF YIAGGMQI FTVAIDYTASNGDPS+ G+LHYHDPTG TNNE A+
Sbjct: 73 TFKFEEVQTLRFEVYDVDTAYSSSDATLIDPSKQDFQGAAECVLAQVIGGRDQTWEGLLSGAKTGKGGSPKVVVRAEEVANSNGLAEITLAGSNIGKGPFLRVSRVSEKGPPIRCFKTEVAKGSPPRPWAPIEISLKVLANGDPYRPLIIEAFTWKKSGNHALLGSCKASVNDLKSMAETGLQNLMLDKGRRAITVRSCTVTPQPNFFGYIAGGMQIGFTVAIDYTASNGDPSRRGSLHYHDPTGRTNNEYAQAI 327
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A6H5L3T5_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T5_9PHAE) HSP 1 Score: 434 bits (1116), Expect = 9.580e-147 Identity = 215/258 (83.33%), Postives = 234/258 (90.70%), Query Frame = 1
Query: 1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGSFLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKK---SGKHVLLGSCKASVNDLKSKADSGVQNLILDKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAK+GKGGSPKVVVRAEEVAN + LA+ITLAGSN+G FLR+SR+ E+GPPI CFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAF+WKK SG HVLLGSCKASVND+KS A++G+QNL+LDKG +ITVRSC +TPQP+FF YIAGGMQI FTVAIDYT SNG PSQP +LHYHDPTG T+NE A+
Sbjct: 107 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKRGKGGSPKVVVRAEEVANCDGLAQITLAGSNIGKWPFLRVSRVSEKGPPIRCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFTWKKRVLSGNHVLLGSCKASVNDIKSMAETGLQNLMLDKGRRAITVRSCTITPQPTFFGYIAGGMQIGFTVAIDYTLSNGRPSQPDSLHYHDPTGRTDNEYAQAI 364
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: D7G7Q5_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q5_ECTSI) HSP 1 Score: 225 bits (573), Expect = 2.520e-66 Identity = 124/260 (47.69%), Postives = 168/260 (64.62%), Query Frame = 1
Query: 1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQ-TWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGS---FLRISRLGEQGPPIPCFKTEVAKGSPPRP-WAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLILDKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
TF+FEEVQ LRF+VYDV+ ++++SDA+ +D Q QG AECALA ++G Q + E L S + S + +RAE+ NS+ L L G+ F RISR E G PIPC+K+EVAK S W+ K+ L VLANGDP+RPL++E F ++KSG HV LGSC+ SV+ + S+A L + G G + + SC L PQPSFFD++AGG+++ FTV IDYTASNGDP+ +LHYHD TG T N+ ++
Sbjct: 102 TFRFEEVQMLRFDVYDVEGSFTTSDASRLDVRMQTSQGTAECALATIMGAHGQMSVEPLRSPHLPHQKAS--ITIRAEQAKNSSDLVVFDLGMRACPRGNKSVFFRISRTAEAGAPIPCYKSEVAKVSGGSVLWSQSKVGLPVLANGDPHRPLVVEFFGYRKSGSHVSLGSCELSVDTMVSRAGEPGGVLNISSGTGQLVIESCKLVPQPSFFDFLAGGLEMQFTVGIDYTASNGDPNVADSLHYHDSTGRTLNQYAQSI 359
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A835ZFM3_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM3_9STRA) HSP 1 Score: 218 bits (556), Expect = 4.370e-64 Identity = 121/255 (47.45%), Postives = 161/255 (63.14%), Query Frame = 1
Query: 1 TFKFEEVQTLRFEVYDVDTAYSSSDAT-HIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGS--FLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLIL----DKGEGS---ITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTG 735
T+ FE+VQ LR E+YD D+A+ ++DAT + KQDFQG AE +A+++G + Q WEG L K G +V + AEEVANSN+L +I + S L G+ FL +SR+ E G C+KTEV K +A I ++L LANGD RPL IE F +KKSG+H+L+G C+ SVND+ S+A S + +G GS + +C L PQPSFFDYIAGG + F VAIDYTASNG + P +LHY P+G
Sbjct: 97 TYHFEKVQRLRVEIYDADSAFKTADATDRLQLDKQDFQGYAEITIAEIIGRKGQCWEGDLVKGKPPTAGRGRVRIVAEEVANSNSLVQIDVRASGLPRGADAFLVLSRISEMGAAARCYKTEVVKSGKTPSFARISVALSTLANGDTLRPLRIEVFDYKKSGRHILIGMCELSVNDIISRATSQEPAYLSRSQNGRGAGSDSMLIFDACTLVPQPSFFDYIAGGCSLNFVVAIDYTASNGPVNDPTSLHYQHPSG 351
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A835ZIA4_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIA4_9STRA) HSP 1 Score: 211 bits (536), Expect = 5.340e-61 Identity = 120/261 (45.98%), Postives = 155/261 (59.39%), Query Frame = 1
Query: 4 FKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLL-SGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNL--------GHGSFLRISRLGEQG-PPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLILDK--GE--GSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTN 744
++FEE+Q LRFEVYD DT++SS+ A +D SKQD +G AECALA +VGG Q W G L S KGG + VRAEEV + N + L +L G FLR+SR E G IPC++TEV + W I L D +RPLL+E F++ + G H L+G+C AS+NDL+ G + L L GE G + V C QPSFFDY+ GGM++ F AIDYT+SNGDP+ PG+LHY DP+G N
Sbjct: 50 YRFEEIQYLRFEVYDADTSFSSASADQLDLSKQDEEGVAECALALIVGGAGQAWTGALTSSTNPHKGGLGTITVRAEEVPDQNLAVSLRLQARDLVLQRKQRKAAGMFLRLSRSVEGGGKAIPCYRTEVRRDKASPQWDTITAPAAALCAADLFRPLLLEVFAYAQEGAHTLVGACSASINDLQGL---GSKTLALKSSAGEACGELAVLECRTFTQPSFFDYLGGGMELQFQCAIDYTSSNGDPATPGSLHYRDPSGKLN 307
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A6H5KG47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG47_9PHAE) HSP 1 Score: 179 bits (455), Expect = 6.730e-49 Identity = 108/275 (39.27%), Postives = 156/275 (56.73%), Query Frame = 1
Query: 1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNL------GHGSFLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLK---SKADSGVQNLILD-----------KGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
T+ FEEVQ +R EVYDVDTA+ ++DAT++D +QDFQG AE +A+V+G QT L G+ G V +R +EV + + L + L N+ +L+I+R+ E G FKTEV + W I+ ++Q LANGD RPL +E + + ++G H +G C AS+ D++ + +D + L K G + V C +T +PSF DYIAGG +I+FT+AIDYTASNG P+ P +LHY DP G N+ A+
Sbjct: 103 TYLFEEVQGVRLEVYDVDTAFKTNDATNVDLGRQDFQGFAETTMAEVLGSSGQT-STLPLMKNTGRAGQAVVSIRMDEVEHQHDLVTLKLRALNVDKKDLTSSDPYLKIARVLETGEQTYIFKTEVQSRTLNPVWREIQGTVQQLANGDLLRPLRVECWDYDRAGGHDFIGGCSASIADMQRWSTASDDASRGPALVNPKKEAKSASYKDSGRLVVDLCTITERPSFLDYIAGGTEISFTMAIDYTASNGTPADPRSLHYVDPAGTVLNDYARAM 376
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A1Y1ISA7_KLENI (Calcium-dependent phospholipid-binding Copine family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ISA7_KLENI) HSP 1 Score: 170 bits (430), Expect = 1.990e-45 Identity = 100/264 (37.88%), Postives = 148/264 (56.06%), Query Frame = 1
Query: 4 FKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGH----GS---FLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQ-------NLILDKG---EGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTN 744
+ FEE Q ++ +++DVDT ++ + +D S+QDF G E LA+V+ Q + ++ + V VRAEEV SNA + L ++ GS FL +SRL E G P FK+EV + W PI+ISLQ L NGD RPL + W +SGKH ++G C S+ DL+++A S + + +KG G + V +TP+PSF +YI GG++++F VAID+TASNG+P+ P +LH+ P G N
Sbjct: 101 YAFEERQLMKVQLWDVDTQIGTNVSQKVDLSRQDFIGEVEFVLAEVITTAGQKLTRPVRNLQRPERAQGTVTVRAEEVTGSNANVTLRLRAESVDRKDVVGSSDPFLFLSRLNEDGTQSPVFKSEVKHNTLHPAWNPIRISLQHLCNGDLDRPLAVRVSDWNRSGKHDVIGECSTSLRDLQARAASTARLPLKNERKAVANKGYVDSGKLVVDEASVTPRPSFLEYIRGGLEVSFLVAIDFTASNGNPNDPASLHFVSPDGRFN 364
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: D8T435_SELML (Uncharacterized protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T435_SELML) HSP 1 Score: 168 bits (425), Expect = 6.350e-45 Identity = 96/267 (35.96%), Postives = 155/267 (58.05%), Query Frame = 1
Query: 1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPK--------VVVRAEEVANSNALAEITLAGSNLGHGSF-------LRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLIL----DKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTN 744
++ F+++Q L F VYD+DT Y+ + + +QDF G C LA+VV Q++ LL K GG+ K + ++AEE+ +S ++ E+ L S+L + F LR+SRL E G +P +K+EV K + W ++ +LQ L NG+ RPL++E F++ +G+H L+GS + S+N+L++ A V + ++ G + V C ++ SF DY+ GG Q++F VA+D+TASNG+P Q +LHY DP+G N
Sbjct: 104 SYSFQDIQQLLFRVYDIDTKYAGVNPQELPLEEQDFLGEMTCLLAEVVAAPGQSFSRLLQ--DKVDGGTDKTGVKSMGTLTIKAEEMQHSKSIVELVLRCSDLNNKDFFSKSDPFLRLSRLREDGSSVPVYKSEVKKNNLHPTWKLVRTTLQQLNNGNMDRPLVVECFNYNGNGRHDLIGSTQVSLNELQASAGGTVSFELKRPSDNQAGGKLHVEGCRISSGHSFLDYLRGGCQLSFMVAVDFTASNGNPHQQDSLHYLDPSGKPN 368
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A8B7XTB9_ACAPL (copine-8-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XTB9_ACAPL) HSP 1 Score: 153 bits (387), Expect = 1.420e-39 Identity = 97/257 (37.74%), Postives = 133/257 (51.75%), Query Frame = 1
Query: 10 FEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGS-------FLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDL-KSKADSGVQNLILDKGE---------GSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDP 729
FEE Q L+FE+YDVD+ D K DF G+A C L +++G R + L G K G + ++ EE+++ L + G NL FL R E G C KTE K + W I L++L N D +R +++E + W ++G H L+G+ + SV L K S V LI + + G IT+ SC + PQ SF DYI GG Q+AFTVAID+TASNGDP QP +LHY +P
Sbjct: 83 FEEKQMLKFELYDVDSKSP-------DLRKHDFLGSATCTLGEIMGSRGCKFTRALRGPSKDCG---LITIKGEELSDCRDLINLQFKGENLDKKDLFGKSDPFLVFHRCNEDGSFTICHKTEYIKNTLKPKWRSFSIMLRMLCNADLHRTIMVECYDWNRNGSHNLIGTFETSVTALSKGPGHSNVYPLIHPRKQAKKKSYHNSGLITLLSCKIEPQYSFLDYIRGGCQLAFTVAIDFTASNGDPRQPTSLHYVNP 329 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11642.1426.1 >prot_Ecto-sp13_S_contig11642.1426.1 ID=prot_Ecto-sp13_S_contig11642.1426.1|Name=mRNA_Ecto-sp13_S_contig11642.1426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGback to top mRNA from alignment at Ecto-sp13_S_contig11642:504..4660+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11642.1426.1 ID=mRNA_Ecto-sp13_S_contig11642.1426.1|Name=mRNA_Ecto-sp13_S_contig11642.1426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4157bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11642:504..4660+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11642:504..4660+ >mRNA_Ecto-sp13_S_contig11642.1426.1 ID=mRNA_Ecto-sp13_S_contig11642.1426.1|Name=mRNA_Ecto-sp13_S_contig11642.1426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11642:504..4660+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |