mRNA_Ecto-sp13_S_contig11642.1426.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11642.1426.1
Unique NamemRNA_Ecto-sp13_S_contig11642.1426.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A6H5LMQ8_9PHAE (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LMQ8_9PHAE)

HSP 1 Score: 481 bits (1239), Expect = 1.940e-165
Identity = 239/258 (92.64%), Postives = 248/258 (96.12%), Query Frame = 1
Query:    1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGSFLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKK---SGKHVLLGSCKASVNDLKSKADSGVQNLILDKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
            TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGA++GKG SPKVVVRAEEVANSNALAEITLAGSN+GHGSFLRISRL EQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAF+WKK   SG HVLLGSCKASVND+KSKADSG QNL+LDKG+GSITV SCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPG+LHYHDPTGHTNNE G A+
Sbjct:  103 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGARRGKGDSPKVVVRAEEVANSNALAEITLAGSNIGHGSFLRISRLSEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFTWKKRVLSGNHVLLGSCKASVNDIKSKADSGSQNLMLDKGQGSITVSSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGSLHYHDPTGHTNNEYGQAI 360          
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: D7FXN1_ECTSI (Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN1_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 5.400e-150
Identity = 215/255 (84.31%), Postives = 234/255 (91.76%), Query Frame = 1
Query:    1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGSFLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLILDKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
            TFKFEEVQTLRFEVYDVDTAYSSSDAT IDPSKQDFQGAAEC LAQV+GGRDQTWEGLLSGAK GKGGSPKVVVRAEEVANSN LAEITLAGSN+G G FLR+SR+ E+GPPI CFKTEVAKGSPPRPWAPI+ISL+VLANGDPYRPL+IEAF+WKKSG H LLGSCKASVNDLKS A++G+QNL+LDKG  +ITVRSC +TPQP+FF YIAGGMQI FTVAIDYTASNGDPS+ G+LHYHDPTG TNNE   A+
Sbjct:   73 TFKFEEVQTLRFEVYDVDTAYSSSDATLIDPSKQDFQGAAECVLAQVIGGRDQTWEGLLSGAKTGKGGSPKVVVRAEEVANSNGLAEITLAGSNIGKGPFLRVSRVSEKGPPIRCFKTEVAKGSPPRPWAPIEISLKVLANGDPYRPLIIEAFTWKKSGNHALLGSCKASVNDLKSMAETGLQNLMLDKGRRAITVRSCTVTPQPNFFGYIAGGMQIGFTVAIDYTASNGDPSRRGSLHYHDPTGRTNNEYAQAI 327          
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A6H5L3T5_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T5_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 9.580e-147
Identity = 215/258 (83.33%), Postives = 234/258 (90.70%), Query Frame = 1
Query:    1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGSFLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKK---SGKHVLLGSCKASVNDLKSKADSGVQNLILDKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
            TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAK+GKGGSPKVVVRAEEVAN + LA+ITLAGSN+G   FLR+SR+ E+GPPI CFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAF+WKK   SG HVLLGSCKASVND+KS A++G+QNL+LDKG  +ITVRSC +TPQP+FF YIAGGMQI FTVAIDYT SNG PSQP +LHYHDPTG T+NE   A+
Sbjct:  107 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKRGKGGSPKVVVRAEEVANCDGLAQITLAGSNIGKWPFLRVSRVSEKGPPIRCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFTWKKRVLSGNHVLLGSCKASVNDIKSMAETGLQNLMLDKGRRAITVRSCTITPQPTFFGYIAGGMQIGFTVAIDYTLSNGRPSQPDSLHYHDPTGRTDNEYAQAI 364          
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: D7G7Q5_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q5_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 2.520e-66
Identity = 124/260 (47.69%), Postives = 168/260 (64.62%), Query Frame = 1
Query:    1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQ-TWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGS---FLRISRLGEQGPPIPCFKTEVAKGSPPRP-WAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLILDKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
            TF+FEEVQ LRF+VYDV+ ++++SDA+ +D   Q  QG AECALA ++G   Q + E L S     +  S  + +RAE+  NS+ L    L       G+   F RISR  E G PIPC+K+EVAK S     W+  K+ L VLANGDP+RPL++E F ++KSG HV LGSC+ SV+ + S+A      L +  G G + + SC L PQPSFFD++AGG+++ FTV IDYTASNGDP+   +LHYHD TG T N+   ++
Sbjct:  102 TFRFEEVQMLRFDVYDVEGSFTTSDASRLDVRMQTSQGTAECALATIMGAHGQMSVEPLRSPHLPHQKAS--ITIRAEQAKNSSDLVVFDLGMRACPRGNKSVFFRISRTAEAGAPIPCYKSEVAKVSGGSVLWSQSKVGLPVLANGDPHRPLVVEFFGYRKSGSHVSLGSCELSVDTMVSRAGEPGGVLNISSGTGQLVIESCKLVPQPSFFDFLAGGLEMQFTVGIDYTASNGDPNVADSLHYHDSTGRTLNQYAQSI 359          
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A835ZFM3_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM3_9STRA)

HSP 1 Score: 218 bits (556), Expect = 4.370e-64
Identity = 121/255 (47.45%), Postives = 161/255 (63.14%), Query Frame = 1
Query:    1 TFKFEEVQTLRFEVYDVDTAYSSSDAT-HIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGS--FLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLIL----DKGEGS---ITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTG 735
            T+ FE+VQ LR E+YD D+A+ ++DAT  +   KQDFQG AE  +A+++G + Q WEG L   K    G  +V + AEEVANSN+L +I +  S L  G+  FL +SR+ E G    C+KTEV K      +A I ++L  LANGD  RPL IE F +KKSG+H+L+G C+ SVND+ S+A S     +      +G GS   +   +C L PQPSFFDYIAGG  + F VAIDYTASNG  + P +LHY  P+G
Sbjct:   97 TYHFEKVQRLRVEIYDADSAFKTADATDRLQLDKQDFQGYAEITIAEIIGRKGQCWEGDLVKGKPPTAGRGRVRIVAEEVANSNSLVQIDVRASGLPRGADAFLVLSRISEMGAAARCYKTEVVKSGKTPSFARISVALSTLANGDTLRPLRIEVFDYKKSGRHILIGMCELSVNDIISRATSQEPAYLSRSQNGRGAGSDSMLIFDACTLVPQPSFFDYIAGGCSLNFVVAIDYTASNGPVNDPTSLHYQHPSG 351          
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A835ZIA4_9STRA (Copine-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIA4_9STRA)

HSP 1 Score: 211 bits (536), Expect = 5.340e-61
Identity = 120/261 (45.98%), Postives = 155/261 (59.39%), Query Frame = 1
Query:    4 FKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLL-SGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNL--------GHGSFLRISRLGEQG-PPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLILDK--GE--GSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTN 744
            ++FEE+Q LRFEVYD DT++SS+ A  +D SKQD +G AECALA +VGG  Q W G L S     KGG   + VRAEEV + N    + L   +L          G FLR+SR  E G   IPC++TEV +      W  I      L   D +RPLL+E F++ + G H L+G+C AS+NDL+     G + L L    GE  G + V  C    QPSFFDY+ GGM++ F  AIDYT+SNGDP+ PG+LHY DP+G  N
Sbjct:   50 YRFEEIQYLRFEVYDADTSFSSASADQLDLSKQDEEGVAECALALIVGGAGQAWTGALTSSTNPHKGGLGTITVRAEEVPDQNLAVSLRLQARDLVLQRKQRKAAGMFLRLSRSVEGGGKAIPCYRTEVRRDKASPQWDTITAPAAALCAADLFRPLLLEVFAYAQEGAHTLVGACSASINDLQGL---GSKTLALKSSAGEACGELAVLECRTFTQPSFFDYLGGGMELQFQCAIDYTSSNGDPATPGSLHYRDPSGKLN 307          
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A6H5KG47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG47_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 6.730e-49
Identity = 108/275 (39.27%), Postives = 156/275 (56.73%), Query Frame = 1
Query:    1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNL------GHGSFLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLK---SKADSGVQNLILD-----------KGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNEVGTAV 765
            T+ FEEVQ +R EVYDVDTA+ ++DAT++D  +QDFQG AE  +A+V+G   QT   L      G+ G   V +R +EV + + L  + L   N+          +L+I+R+ E G     FKTEV   +    W  I+ ++Q LANGD  RPL +E + + ++G H  +G C AS+ D++   + +D   +   L            K  G + V  C +T +PSF DYIAGG +I+FT+AIDYTASNG P+ P +LHY DP G   N+   A+
Sbjct:  103 TYLFEEVQGVRLEVYDVDTAFKTNDATNVDLGRQDFQGFAETTMAEVLGSSGQT-STLPLMKNTGRAGQAVVSIRMDEVEHQHDLVTLKLRALNVDKKDLTSSDPYLKIARVLETGEQTYIFKTEVQSRTLNPVWREIQGTVQQLANGDLLRPLRVECWDYDRAGGHDFIGGCSASIADMQRWSTASDDASRGPALVNPKKEAKSASYKDSGRLVVDLCTITERPSFLDYIAGGTEISFTMAIDYTASNGTPADPRSLHYVDPAGTVLNDYARAM 376          
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A1Y1ISA7_KLENI (Calcium-dependent phospholipid-binding Copine family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ISA7_KLENI)

HSP 1 Score: 170 bits (430), Expect = 1.990e-45
Identity = 100/264 (37.88%), Postives = 148/264 (56.06%), Query Frame = 1
Query:    4 FKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGH----GS---FLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQ-------NLILDKG---EGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTN 744
            + FEE Q ++ +++DVDT   ++ +  +D S+QDF G  E  LA+V+    Q     +   ++ +     V VRAEEV  SNA   + L   ++      GS   FL +SRL E G   P FK+EV   +    W PI+ISLQ L NGD  RPL +    W +SGKH ++G C  S+ DL+++A S  +         + +KG    G + V    +TP+PSF +YI GG++++F VAID+TASNG+P+ P +LH+  P G  N
Sbjct:  101 YAFEERQLMKVQLWDVDTQIGTNVSQKVDLSRQDFIGEVEFVLAEVITTAGQKLTRPVRNLQRPERAQGTVTVRAEEVTGSNANVTLRLRAESVDRKDVVGSSDPFLFLSRLNEDGTQSPVFKSEVKHNTLHPAWNPIRISLQHLCNGDLDRPLAVRVSDWNRSGKHDVIGECSTSLRDLQARAASTARLPLKNERKAVANKGYVDSGKLVVDEASVTPRPSFLEYIRGGLEVSFLVAIDFTASNGNPNDPASLHFVSPDGRFN 364          
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: D8T435_SELML (Uncharacterized protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T435_SELML)

HSP 1 Score: 168 bits (425), Expect = 6.350e-45
Identity = 96/267 (35.96%), Postives = 155/267 (58.05%), Query Frame = 1
Query:    1 TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPK--------VVVRAEEVANSNALAEITLAGSNLGHGSF-------LRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLIL----DKGEGSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTN 744
            ++ F+++Q L F VYD+DT Y+  +   +   +QDF G   C LA+VV    Q++  LL    K  GG+ K        + ++AEE+ +S ++ E+ L  S+L +  F       LR+SRL E G  +P +K+EV K +    W  ++ +LQ L NG+  RPL++E F++  +G+H L+GS + S+N+L++ A   V   +     ++  G + V  C ++   SF DY+ GG Q++F VA+D+TASNG+P Q  +LHY DP+G  N
Sbjct:  104 SYSFQDIQQLLFRVYDIDTKYAGVNPQELPLEEQDFLGEMTCLLAEVVAAPGQSFSRLLQ--DKVDGGTDKTGVKSMGTLTIKAEEMQHSKSIVELVLRCSDLNNKDFFSKSDPFLRLSRLREDGSSVPVYKSEVKKNNLHPTWKLVRTTLQQLNNGNMDRPLVVECFNYNGNGRHDLIGSTQVSLNELQASAGGTVSFELKRPSDNQAGGKLHVEGCRISSGHSFLDYLRGGCQLSFMVAVDFTASNGNPHQQDSLHYLDPSGKPN 368          
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Match: A0A8B7XTB9_ACAPL (copine-8-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XTB9_ACAPL)

HSP 1 Score: 153 bits (387), Expect = 1.420e-39
Identity = 97/257 (37.74%), Postives = 133/257 (51.75%), Query Frame = 1
Query:   10 FEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGGRDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGS-------FLRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLIEAFSWKKSGKHVLLGSCKASVNDL-KSKADSGVQNLILDKGE---------GSITVRSCILTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDP 729
            FEE Q L+FE+YDVD+          D  K DF G+A C L +++G R   +   L G  K  G    + ++ EE+++   L  +   G NL           FL   R  E G    C KTE  K +    W    I L++L N D +R +++E + W ++G H L+G+ + SV  L K    S V  LI  + +         G IT+ SC + PQ SF DYI GG Q+AFTVAID+TASNGDP QP +LHY +P
Sbjct:   83 FEEKQMLKFELYDVDSKSP-------DLRKHDFLGSATCTLGEIMGSRGCKFTRALRGPSKDCG---LITIKGEELSDCRDLINLQFKGENLDKKDLFGKSDPFLVFHRCNEDGSFTICHKTEYIKNTLKPKWRSFSIMLRMLCNADLHRTIMVECYDWNRNGSHNLIGTFETSVTALSKGPGHSNVYPLIHPRKQAKKKSYHNSGLITLLSCKIEPQYSFLDYIRGGCQLAFTVAIDFTASNGDPRQPTSLHYVNP 329          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11642.1426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LMQ8_9PHAE1.940e-16592.64C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
D7FXN1_ECTSI5.400e-15084.31Copine n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A6H5L3T5_9PHAE9.580e-14783.33C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G7Q5_ECTSI2.520e-6647.69C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835ZFM3_9STRA4.370e-6447.45Copine-domain-containing protein n=1 Tax=Tribonema... [more]
A0A835ZIA4_9STRA5.340e-6145.98Copine-domain-containing protein n=1 Tax=Tribonema... [more]
A0A6H5KG47_9PHAE6.730e-4939.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y1ISA7_KLENI1.990e-4537.88Calcium-dependent phospholipid-binding Copine fami... [more]
D8T435_SELML6.350e-4535.96Uncharacterized protein n=6 Tax=Selaginella moelle... [more]
A0A8B7XTB9_ACAPL1.420e-3937.74copine-8-like n=1 Tax=Acanthaster planci TaxID=133... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11642contigEcto-sp13_S_contig11642:504..4660 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score486.5
Seed ortholog evalue7.6e-135
Seed eggNOG ortholog2880.D7FXN0
Model size765
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0005488,GO:0005543,GO:0005544,GO:0005575,GO:0005623,GO:0005886,GO:0005911,GO:0008150,GO:0008289,GO:0008361,GO:0009266,GO:0009270,GO:0009415,GO:0009506,GO:0009628,GO:0009987,GO:0010035,GO:0010118,GO:0010941,GO:0016020,GO:0016043,GO:0030054,GO:0032535,GO:0042221,GO:0043167,GO:0043168,GO:0044464,GO:0045793,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0055044,GO:0060548,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066,GO:0090332,GO:1901700
Exons7
EggNOG free text desc.negative regulation of response to water deprivation
EggNOG OGsKOG1327@1,KOG1327@2759
Cds size765
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11642.1426.1prot_Ecto-sp13_S_contig11642.1426.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11642 504..4660 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462612.8477297-CDS-Ecto-sp13_S_contig11642:503..6051681462612.8477297-CDS-Ecto-sp13_S_contig11642:503..605Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11642 504..605 +
1681462612.8623362-CDS-Ecto-sp13_S_contig11642:781..9661681462612.8623362-CDS-Ecto-sp13_S_contig11642:781..966Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11642 782..966 +
1681462612.8770165-CDS-Ecto-sp13_S_contig11642:1287..13661681462612.8770165-CDS-Ecto-sp13_S_contig11642:1287..1366Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11642 1288..1366 +
1681462612.89025-CDS-Ecto-sp13_S_contig11642:2130..22341681462612.89025-CDS-Ecto-sp13_S_contig11642:2130..2234Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11642 2131..2234 +
1681462612.8995597-CDS-Ecto-sp13_S_contig11642:2726..27811681462612.8995597-CDS-Ecto-sp13_S_contig11642:2726..2781Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11642 2727..2781 +
1681462612.9085343-CDS-Ecto-sp13_S_contig11642:3572..36641681462612.9085343-CDS-Ecto-sp13_S_contig11642:3572..3664Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11642 3573..3664 +
1681462612.917402-CDS-Ecto-sp13_S_contig11642:4512..46601681462612.917402-CDS-Ecto-sp13_S_contig11642:4512..4660Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11642 4513..4660 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11642.1426.1

>prot_Ecto-sp13_S_contig11642.1426.1 ID=prot_Ecto-sp13_S_contig11642.1426.1|Name=mRNA_Ecto-sp13_S_contig11642.1426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp
TFKFEEVQTLRFEVYDVDTAYSSSDATHIDPSKQDFQGAAECALAQVVGG
RDQTWEGLLSGAKKGKGGSPKVVVRAEEVANSNALAEITLAGSNLGHGSF
LRISRLGEQGPPIPCFKTEVAKGSPPRPWAPIKISLQVLANGDPYRPLLI
EAFSWKKSGKHVLLGSCKASVNDLKSKADSGVQNLILDKGEGSITVRSCI
LTPQPSFFDYIAGGMQIAFTVAIDYTASNGDPSQPGTLHYHDPTGHTNNE
VGTAV
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mRNA from alignment at Ecto-sp13_S_contig11642:504..4660+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11642.1426.1 ID=mRNA_Ecto-sp13_S_contig11642.1426.1|Name=mRNA_Ecto-sp13_S_contig11642.1426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4157bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11642:504..4660+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACGTTCAAGTTCGAAGAGGTCCAGACTCTCCGCTTCGAGGTGTACGACGT GGACACGGCTTACTCATCATCGGACGCCACACACATCGACCCATCAAAGC AGGTGCGGGTTACCATATGACGGTGTGGACTCTCGTGGCTCACAAGTGTC TGCGGCGCTCTGTACTACTGTGGAATATGCAGGAGTTCCTCTTTCACTGC ATTTTCATGCCAACGCGAGAGGAGCATTTATCCTTCTCCTCTACCCCCCC CCCCCCTCCGTCACCACCATATGCGAAGGACTTCCAAGGGGCGGCGGAGT GTGCGCTCGCCCAGGTGGTCGGGGGGCGAGATCAGACATGGGAGGGCCTC TTGTCTGGCGCGAAGAAGGGGAAGGGCGGCTCGCCGAAGGTCGTGGTTCG CGCGGAAGAGGTGGCCAACTCCAACGCTCTCGCCGAGATAACTCTGGCCG GCTCTAACCTTGGGTGAGGTTTGTCTTTCCACCTTGTTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTGTTGTTGCCGTTGCCTTCGTAACCACTCT CCCAAGCATGCCTCCAGAGCCCGAACTGATTCATTCAGAAAAAAAAAACA CCCATACATTGATAACGGTGGACCCAAACCCGAACTCAACCATCGCTTGC AGCAGCAGCAGCAGCAGCAGGACGAGCAGCAACGTCGGTACTGTCAACAC ATGTGTATCCAGAAGCCTAAGAACGGAAAAAAAAATATGACGTCACCCCT GCCCCCCCTCTCGTTCGCCCCGTGCCCTCAAAAGACACGGTTCGTTTTTG CGCATCAGCCGATTGGGCGAGCAAGGCCCACCGATCCCGTGCTTCAAGAC CGAAGTGGCTAAGGTTCGTACATGCGAGGATATAGTAGTGTTGTTCTTTC AGGCTTGTGTTCATCTTGCTATTTTTTTTTTTGCAACTGGTGGAGCGCAC TTATCGTGATTCGAGGGATTGAAGCTACCAACATGCGGCGGTCAGCATGC ACAGGATGTTGCCACAGGCTATGATAGAGGTGCAGACATGCCTTCGTGTT TCGTGTCGCCCGTCCTCGCGCGAGTGTTGAAACGCTCCATATGCGCGTCT ATACGTCATCAAGTGCCGAAGGCGGGTAGGTAGGCCATCATTGAGCAGCG TTTCGCGCGAACACGAGCGGTTGGATGGTGTTCTTGATGAGACACGGCTT TGATCATGCTTCAACCTCAACAGCAGAGGCTGTCATGTGCAGTCGATGGA ATGGTGTCTTTTTTTTTTTTCGTTGTGGTTGTCGTCCCAGCTCTCGAGTA AAGCAGGTGATTGGAGTACGGTCTTGGAAGTTGTGTCGTCATCAAGTAGG ATGTTCATGGAATAGAGGGCGAGTTAGTATATCGTGTCGGATCAAGGGTT TGATTTTCGCTGGCCCCTCTCCTCCTTCGCCTGTCGCCACCTTAACGAGA TAATTCCCCTGTCATTACTTCCGATCGTTCAAGTTTGTTCGAGTTCTTGA GCAGTGCCCCTTGGTCGATTGTCCTTCCTCTTGTTTTTTTTTCCTTTCGT GTTGAATGCCTTCGTCTTCGATTTCTCCGTGACTTCCGAACTTTCTCTTC CTGACTGGCCGTTATGTACGTCTACAGGGGTCCCCGCCAAGACCATGGGC ACCAATCAAGATTTCTCTCCAGGTCCTGGCAAACGGTGATCCCTATCGCC CGCTCCTCATAGAGGCTTTCTCCTGGAAAAAGTGAGTATTGCTTCTTCTC GTAGGCATCTCTCTCCCTCCTTCTCCCACTTCTTCGTTTTTTGACTCTTG CGCCCACGGTGATGTTGACCCTAGCCACCTACTTTAATGTTGAGATCAAG GCCGCATGTTTCTCACCGCCGCCCAACATTGTTCGGAGATTCACCCTGCT TCGCACACAAAAAGATCCTGGCTCCATCCAGATTATGTGGTCAACTGCAT CGCTTGTCCTCTGCCCTATCCCTCCTCCATTGCACGTCGAATCCACTTCT TTTTTGGCCTCTTCTCCCTCCCCCCGTCTGTCCCTCACCGGAATAGGGGG TTTCTCCAACAGGCCTCTCACCTGCATTTCCGCGTGCCTTGACTCTGTGT TGCACGTTCCGACGACCAATCGTGCCGACATGTGCTGCTGGTAGTGATTG ATCTGTTTCGGGGTTCGTGCTCAACGCGCCCTTGCCGCTGTTGGTGGTGA ACCATTTCCGTTTTCTTTGACAGGTCCGGGAAGCACGTTCTGCTTGGGTC CTGCAAGGCTAGCGTGAACGACCTCAAGGTAAGATGTTTGTGGTGGTTTA CCCGTTGCCGCCCCGAATGCCCGTGATGCTGTCGGTCTTGGATTGGGTGA TGTGACCCTACAGTAGTACGTCGTCCTTGAAGAATAGGATTCGTTAGTGG TCTGTCTCACAACCCACTGGATTGTGGAAGCTTGTACCACTGGCGCCGAC GACAGAGGACGTTAAGTTGATAACTCCACAATTCGGTACATTTGATAACA TGATTTTATCTGCAGGCAGCACCCACACGAGGTGCCATCTTGAGGTTGAT ATTCGGAACCGTCATGTATCCCATCCCATGTACCATATACCATAGCTGCA AGTATCTGAGTCATTCGTCACTCCCCCCTTTGCCTTGTAATTGTTGAGGG CATGGACTATTGTCGTTGTTGTTGTTGATGTTGTTGTTGTTGCTGCTGCT GCTGTTTCGGTGGTTGTTGTTGTTGTGCCTCGTGCTGAGAGAGCGTATAT CTCGCTACGTGCTTTTAGTGCCCCTTTCTGCACCGGTATGCGGTGTGATC GTCGTGAGTACTCTCTGTTGGGATCGGTCGGGAAAAATCTGGGATACTGT ACAACCGAGTTCTTTGATCGATCTGCCTTGTAAGGGCGTGCTTGCATTAC ACCGACAACAGCCCCCGTACAAGCTGTGCACCTGTCGCACAACGCCACCG TTCCCACAGCGAAAGCAAGCCAACGACCACATTCGCCACGTGTACAGCTC TTGTCCGTATGTACCGACCTCCAACGAACACGCTCCCGCTCGACCCCTTT TTCGTCCGCTTTCTGTCAGTCAAAGGCGGACTCTGGGGTGCAGAACTTGA TATTGGACAAGGGAGAGGGTTCGATAACCGTGAGGTCGTGCATACTCACG CCGCAGCCGAGGTATGTGTTGTGCTCCGCGTGCTTCTTTTGGGAAACAAA ACCATGTTCTTCCAATCTTGTCTCTTTGAGCAATAAAGCACCTCGTGTTC CCCAGGGGACAGGGTGTTTCACTGCCGTAGTGGTAGCTGAAAGCGGAATT TTTGTTAGAGCTTGCAACTTGTGTTGTAGACGCGCAGCCTCCGCCAACTC ACGCACGGAAGCCGATTTTTTCCCGCCATTTAGGCCCAGTGTTTGGGGGG GGAAATGCTACACAGGAGCTTTCTTTTGGGGGGGGGCGGGAGAGACGGGG AGGCTGAAGGGAGGTTGAGGTTGCGGTATACATGTCGTCTGTTTTCTCTC CTTGTTTCCGTCGGGAAAATCGAGTTAATTTCAGCTTTTTTTTGATGTTT TTCGCTTCAATAGAATTGCATCCCCTCCACACCTTGCACACGCCCCCATC ATCGCGGCCGCTGTGTTGCTGCTGCGTACGGCTGGCGTGCCGCGTGCCCA TGACTGGCCCTGACGATGGCATCTACGATGGTCATCACCCTCTCTCACCG AATATCAACCGAGCTCGAGTTTTTTTCCCTGTCGAGTGCGCCTGCGATTT ATGCTGGTGTTGTCGAGGCGTGTGCCGGTGTTGCTCCTCCTTCTATGTCC TGTCTCTTCGTACTATTGTGCATACCCGTGGCAAGAGGTTCTCCTGCTGA CAAACCTGCTGCCTCTGTTGCCTCCACCTCCTGTTGTTGTTGTTGTTGTT GTTGTTGTTGTTGCTACTGCTGCTGCTACTGCTGTGAATGCTGCTGTGGC TGCTGTTGCCACCCCCTCCGGTTTGTCGTCGGTCCGATCCGATGCGACCC TCTCCTCAGTTTCTTCGACTACATCGCGGGGGGCATGCAGATCGCCTTCA CTGTGGCCATCGACTACACGGCCAGCAACGGGGACCCGTCGCAGCCCGGC ACGCTTCACTACCACGACCCTACCGGCCACACCAACAATGAGGTAGGTAC TGCTGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11642:504..4660+

>mRNA_Ecto-sp13_S_contig11642.1426.1 ID=mRNA_Ecto-sp13_S_contig11642.1426.1|Name=mRNA_Ecto-sp13_S_contig11642.1426.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11642:504..4660+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACGTTCAAGTTCGAAGAGGTCCAGACTCTCCGCTTCGAGGTGTACGACGT
GGACACGGCTTACTCATCATCGGACGCCACACACATCGACCCATCAAAGC
AGGACTTCCAAGGGGCGGCGGAGTGTGCGCTCGCCCAGGTGGTCGGGGGG
CGAGATCAGACATGGGAGGGCCTCTTGTCTGGCGCGAAGAAGGGGAAGGG
CGGCTCGCCGAAGGTCGTGGTTCGCGCGGAAGAGGTGGCCAACTCCAACG
CTCTCGCCGAGATAACTCTGGCCGGCTCTAACCTTGGACACGGTTCGTTT
TTGCGCATCAGCCGATTGGGCGAGCAAGGCCCACCGATCCCGTGCTTCAA
GACCGAAGTGGCTAAGGGGTCCCCGCCAAGACCATGGGCACCAATCAAGA
TTTCTCTCCAGGTCCTGGCAAACGGTGATCCCTATCGCCCGCTCCTCATA
GAGGCTTTCTCCTGGAAAAAGTCCGGGAAGCACGTTCTGCTTGGGTCCTG
CAAGGCTAGCGTGAACGACCTCAAGTCAAAGGCGGACTCTGGGGTGCAGA
ACTTGATATTGGACAAGGGAGAGGGTTCGATAACCGTGAGGTCGTGCATA
CTCACGCCGCAGCCGAGTTTCTTCGACTACATCGCGGGGGGCATGCAGAT
CGCCTTCACTGTGGCCATCGACTACACGGCCAGCAACGGGGACCCGTCGC
AGCCCGGCACGCTTCACTACCACGACCCTACCGGCCACACCAACAATGAG
GTAGGTACTGCTGTG
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