mRNA_Ecto-sp13_S_contig11633.1415.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: A0A1B2YX85_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1B2YX85_9BACT) HSP 1 Score: 72.8 bits (177), Expect = 4.530e-16 Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 1
Query: 7 LYTRYAPVRRSSASASTPVTPRLACVKPAASVHPEPGSNSSLLNF 141
++TRYAPVR SS+ AST VT RLACVKPAASVHPEPGSNSSL NF
Sbjct: 1 MHTRYAPVRHSSSGASTNVTVRLACVKPAASVHPEPGSNSSLYNF 45
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: UPI001E5F3CDA (hypothetical protein n=1 Tax=Parabacteroides sp. 2_1_7 TaxID=457388 RepID=UPI001E5F3CDA) HSP 1 Score: 71.2 bits (173), Expect = 4.010e-15 Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 1
Query: 1 GRLYTRYAPVRRSSASASTPVTPRLACVKPAASVHPEPGSNSSLLNF 141
G+L+TRY+PVRRS A +TP PRLACVKP ASVHPEPGSNSSL
Sbjct: 2 GKLHTRYSPVRRSPAGIATPAAPRLACVKPVASVHPEPGSNSSLFKL 48
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: A0A1B2ZB17_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1B2ZB17_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 1.860e-12 Identity = 32/42 (76.19%), Postives = 36/42 (85.71%), Query Frame = 1
Query: 1 GRLYTRYAPVRRSSASASTPVTPRLACVKPAASVHPEPGSNS 126
GRL+T YAPVRR SAST + PRLAC++PAASVHPEPGSNS
Sbjct: 20 GRLHTCYAPVRRFPFSASTKLLPRLACIRPAASVHPEPGSNS 61
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: A0A0G0MFX9_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Uhrbacteria bacterium GW2011_GWF2_39_13 TaxID=1618995 RepID=A0A0G0MFX9_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 2.290e-12 Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 1 GRLYTRYAPVRRSSASASTPVTPRLACVKPAASVHPEPGSNSSL 132
G L TRYAP+RRS +T PRLACVKPAASVHPEPGSNSSL
Sbjct: 13 GMLLTRYAPLRRSPPDIATRDAPRLACVKPAASVHPEPGSNSSL 56
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: A0A1B2YTP5_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1B2YTP5_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 4.120e-12 Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 7 LYTRYAPVRRSSASASTPVTPRLACVKPAASVHPEPGSNSSL 132
++TRYAPVRRS S ST PRLAC++PAASVHPEPGSNS L
Sbjct: 1 MHTRYAPVRRSPPSTSTRAAPRLACIRPAASVHPEPGSNSPL 42
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: UPI000673CD16 (hypothetical protein n=1 Tax=Parabacteroides sp. 2_1_7 TaxID=457388 RepID=UPI000673CD16) HSP 1 Score: 62.0 bits (149), Expect = 9.480e-11 Identity = 31/39 (79.49%), Postives = 32/39 (82.05%), Query Frame = 2
Query: 17 VTHPCAGRQRVQALLLPLDLHVLSLPLAFILSQDQTLHC 133
VTHPCAGR V +LPLDLHVLSL LAFILSQDQTL C
Sbjct: 1 VTHPCAGRHPVLLPVLPLDLHVLSLSLAFILSQDQTLRC 39
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: A0A0B7HGG2_9FLAO (Uncharacterized protein n=1 Tax=Capnocytophaga canimorsus TaxID=28188 RepID=A0A0B7HGG2_9FLAO) HSP 1 Score: 57.8 bits (138), Expect = 4.450e-10 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 7 LYTRYAPVRRSSASASTPVTPRLACVKPAASVHPEPGSNSSLLNF 141
+YT YAPVRRS + TPRLACV+PAASVHPEPGSNSS L
Sbjct: 1 MYTCYAPVRRSQVPKHS--TPRLACVRPAASVHPEPGSNSSSLKI 43
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: A0A1B2YNL6_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1B2YNL6_9BACT) HSP 1 Score: 57.4 bits (137), Expect = 9.250e-10 Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 1
Query: 58 PVTPRLACVKPAASVHPEPGSNSSLLNF 141
PVTPRLAC++PAASVHPEPGSNSSLLNF
Sbjct: 22 PVTPRLACIRPAASVHPEPGSNSSLLNF 49
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: A0A014AUH4_9GAMM (Uncharacterized protein (Fragment) n=1 Tax=Acinetobacter sp. 25977_7 TaxID=1310911 RepID=A0A014AUH4_9GAMM) HSP 1 Score: 56.2 bits (134), Expect = 1.810e-9 Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 1 GRLYTRYAPVRRSSASASTP--VTPRLACVKPAASVHPEPGSN 123
GRL TRY+PVRRS +S ++ PRLACVKP ASVHPEPGSN
Sbjct: 14 GRLDTRYSPVRRSPSSVASNRHAAPRLACVKPVASVHPEPGSN 56
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Match: A0A502GMN8_9BACT (Uncharacterized protein n=1 Tax=Hymenobacter nivis TaxID=1850093 RepID=A0A502GMN8_9BACT) HSP 1 Score: 55.5 bits (132), Expect = 1.590e-8 Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 1
Query: 1 GRLYTRYAPVRRSSASASTPVTPRLACVKPAASVHPEPGSNSSLLNF 141
GRL TRYAPVR + T RLAC++PAASVHPEPGSNS L N
Sbjct: 18 GRLATRYAPVRHYGIA----TTVRLACIRPAASVHPEPGSNSPLYNI 60 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11633.1415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11633.1415.1 >prot_Ecto-sp13_S_contig11633.1415.1 ID=prot_Ecto-sp13_S_contig11633.1415.1|Name=mRNA_Ecto-sp13_S_contig11633.1415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=48bp GRLYTRYAPVRRSSASASTPVTPRLACVKPAASVHPEPGSNSSLLNF*back to top mRNA from alignment at Ecto-sp13_S_contig11633:5021..5164+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11633.1415.1 ID=mRNA_Ecto-sp13_S_contig11633.1415.1|Name=mRNA_Ecto-sp13_S_contig11633.1415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=144bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11633:5021..5164+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11633:5021..5164+ >mRNA_Ecto-sp13_S_contig11633.1415.1 ID=mRNA_Ecto-sp13_S_contig11633.1415.1|Name=mRNA_Ecto-sp13_S_contig11633.1415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=144bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11633:5021..5164+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |