mRNA_Ecto-sp13_S_contig1163.1411.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1163.1411.1
Unique NamemRNA_Ecto-sp13_S_contig1163.1411.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: D7FMG8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG8_ECTSI)

HSP 1 Score: 588 bits (1516), Expect = 2.600e-208
Identity = 288/289 (99.65%), Postives = 288/289 (99.65%), Query Frame = 1
Query:    1 MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLMGACVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTE 867
            MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLMG CVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTE
Sbjct:    1 MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLMGTCVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTE 289          
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: A0A6H5JLH9_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH9_9PHAE)

HSP 1 Score: 361 bits (927), Expect = 1.570e-118
Identity = 184/327 (56.27%), Postives = 231/327 (70.64%), Query Frame = 1
Query:  580 YRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTEPKDGRPKVRRA-VHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGRFDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDAASYLVHGLVEDAEYDTDMTAQQKAELLQGRWEAIWG 1557
            Y DR LCWLMMLR+  CFH M  L+GP  +TF R+F+WMT QA TL  L DEI WP+ EER+AQ  FLA   HP L N+A+I DGTK + MR P +P+DG  +   A V+  HYS+NKGLGY+H +Y N RGKP+RVET  G  SDR A+  SR++L+P  FL+ GE G+GDG Y G+AR D TG  MCVP +   +LT  +R FN++QRR+RVVVENTIGQ+KK+RVIG G+F H RD EP VFELC +LTARIMRVR+ +PRS+EWL  +   WE+KLG+FL+ D  +  SYLVH    D  Y++  T   +A +LQ RW  IWG
Sbjct:    3 YLDRALCWLMMLRQDFCFHTMADLWGPSAATFQREFVWMTTQATTLEILNDEIQWPTAEERRAQGEFLARVAHPDLGNIAFIIDGTK-SLMRIPAKPRDGITQDPTAEVNDMHYSNNKGLGYTHQIYCNIRGKPLRVETRRGAESDRGAYNNSRVYLQPTEFLSPGEVGLGDGGYVGEARAD-TGEAMCVPLR-GGHLTEAERGFNARQRRIRVVVENTIGQVKKWRVIGTGKFRHHRDLEPAVFELCTKLTARIMRVRDKFPRSKEWLWKEYEEWEAKLGIFLFADTENPQSYLVHNFGADLLYNS-ATPNGRATVLQHRWNVIWG 325          
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: A0A6H5JMX0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX0_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 3.730e-84
Identity = 178/449 (39.64%), Postives = 231/449 (51.45%), Query Frame = 1
Query:  244 VEERIRGSLM-GACVREAGKLLPGPGRGRSEANAAASNTRRNLKYP---DGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGD-EGHL------FRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGR-FDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDAASYLVHGLVEDAEYDTDMTAQQKAELLQGRWEAIW 1554
            VEE +R + M    +++   L+PG GRG+SEAN  AS  R  L +P    GIY A    T+   +  TGF + EFDDF+ A   D EG+L      F+  R+  G+ TP EN ARRTI+G++  +DRVLC++ MLRR   F +M+  +G  + T+  +F  MT+ A  +PCL                                                                                     +VETV G LSDR A  +S +F  PD FL+  E GMGDGNYRG AR DS  + MC P    PN+  E R +N +QRR RVVVENTIGQIKKF+ +G G+ F HQRDFE HVF +CARLTARIMRVRN YPRSE W+ ++   WE+KLG+  + D  +   YL+H   E+  YD   T +  AE LQ  W+AIW
Sbjct:   67 VEEDMRRATMYKQQLKKIKPLIPGVGRGKSEANLLASRKRTALVFPAEQGGIYGA---HTSSQIRYKTGFTKEEFDDFFAATHIDREGNLLPRSWFFQQARNNLGKHTPEENQARRTIRGSMSDQDRVLCYVEMLRRDTSFEDMSLKYGRSKGTWSNEFHDMTMAAQDMPCLQ------------------------------------------------------------------------------------QVETVRGSLSDRGALLSSDVFQHPDQFLSADEVGMGDGNYRGLARADSNDMYMCAPHP-GPNVPPEGRRYNREQRRFRVVVENTIGQIKKFKTVGNGKAFRHQRDFEKHVFNVCARLTARIMRVRNKYPRSEAWIGDKKEEWEAKLGIHYYWDYDEPGCYLIHNEGENLVYDN--TIEGTAEGLQEAWDAIW 425          
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: A0A6H5KIX2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX2_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 5.500e-72
Identity = 143/297 (48.15%), Postives = 172/297 (57.91%), Query Frame = 1
Query:  583 RDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSP--NLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGR-FDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDAASYLV 1464
            RDRVLCWL MLRR   F +M    G    TF  +F  MT  A  +P L +EI WP   ER A   FL    HP    VAYIADGT    MRNP +   G+P+    VH  +YS NKGLG SHIVY N R +        G  SD                      GMGDG Y G+AR DS  L MCVP++     +L++E+R FN++QRR RVVVENT+GQIKK++ +G G+ F H+RDFE  VF++CARLTARIMRVR+ YPRS EW       WE KLG+ L+ D  D  SYLV
Sbjct:    4 RDRVLCWLEMLRRDTLFEDMALACGRCAGTFHNEFKDMTAAAQNMPSLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTM-VNMRNPAKVGKGQPEPHAPVHQANYSRNKGLGTSHIVYCNVRDR-------DGGWSD----------------------GMGDGAYLGNARADSD-LPMCVPYRKPQQGDLSNEERRFNTEQRRFRVVVENTVGQIKKWKAVGNGKAFRHRRDFEKDVFDVCARLTARIMRVRDGYPRSPEWTGRVKEAWEVKLGIHLYWDYEDPKSYLV 269          
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: A0A6H5KWG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWG0_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 6.010e-42
Identity = 94/212 (44.34%), Postives = 119/212 (56.13%), Query Frame = 1
Query:  382 GIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGD-EGH------LFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETV 996
            GIY+A    ++   +  TG  ++EFD FY     D EG+      LF   R+  G ++  +N ARR I+G++  RDRVLCWL MLRR  CF +M   +G    T+  +F   T  A  +PCL +EI WP   ER A   FL    HP    VAYIADGT    MRNP +   G+P+    VH  +YS NKGLG SHIVY N RGKPIRV  +
Sbjct:   93 GIYDA---HSSSQIRYKTGMEKDEFDAFYEDTFLDAEGNRLARSWLFGQARNHLGNYSAEDNKARRVIRGSMDDRDRVLCWLEMLRRDTCFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTM-VNMRNPAKVGKGQPEPHAPVHQANYSGNKGLGTSHIVYCNVRGKPIRVRRI 300          
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: A0A6H5KLU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU9_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.090e-40
Identity = 88/191 (46.07%), Postives = 109/191 (57.07%), Query Frame = 1
Query:  445 RNEFDDFYTAQGGD-EGH------LFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETV 996
            ++EFDDFY     D EG+      LF   R+  G ++  +N ARR I+G++  RDRVLCWL MLRR   F +M   +G    T+  +F   T  A  +PCL +EI WP   ER A   FL    HP    VAYIADGT    MRNP +   G+P+    VH  +YS NKGLG SHIVY N RGKPIRV  +
Sbjct:    3 KDEFDDFYEDMFLDAEGNRLARSWLFGQARNHLGNYSAEDNKARRVIRGSIDDRDRVLCWLEMLRRDTLFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEIQWPDAAERAAHCTFLQTWGHPDFPRVAYIADGTM-VNMRNPAKVGKGQPEPHAPVHQANYSGNKGLGTSHIVYCNVRGKPIRVRRI 192          
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: A0A6H5KI20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI20_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.120e-37
Identity = 127/444 (28.60%), Postives = 173/444 (38.96%), Query Frame = 1
Query:  247 EERIRGSLMGACVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGD-EGH------LFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGR-FDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDAASYLVHGLVEDAEYDTDMTAQQKAELLQGRWEAIW 1554
            E+  RG      +++ G LLP  GR    +               GIY+A    ++   +  TG  ++EFD FY     D EG+      LF   R+  G ++  +N ARR I+G++  RDRVLCWL MLRR   F +M   +G    T+  +F   T  A  +PCL +E A                                                                                                                   GD                         L++E+R FN++QRR RVV ENTIG+IKK++ +G G+ F H+RDFE  VF++CARLTARIMRVR+ YPRS EW       WE KLG+ L+ D  D  SYLVH   E   Y   +  +  A+ LQ  W++IW
Sbjct:   64 EDMRRGLTYRHSLKKLGPLLPRIGREGFPSEEG------------GIYDA---HSSSQIRYKTGMEKDEFDAFYEDTFLDAEGNRLARSCLFGQARNHVGNYSAEDNKARRVIRGSMDDRDRVLCWLEMLRRDTLFEDMALAYGRCAGTYHNEFKDTTAAAQNMPCLQEEAA------------------------------------------------------------------------------------------------------------------AGD-------------------------LSNEERRFNTEQRRFRVVAENTIGKIKKWKAVGNGKAFRHRRDFEKDVFDVCARLTARIMRVRDRYPRSPEWTGRVKEAWEVKLGIHLYWDYEDPKSYLVHN--EGENYVYGVANEGTAQHLQQCWDSIW 351          
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: A0A7S4JHM0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JHM0_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 1.520e-31
Identity = 98/347 (28.24%), Postives = 158/347 (45.53%), Query Frame = 1
Query:  451 EFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFL--AATFHPRLANVAYIADGTKGAAMRNPTEPKDGRPKVRRAVHGQHYSHN-------KGLGYSHIVYVNARGKPIRVET-VSGRLSDRAAHTASRLFLEPDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQ-----FSPNLTHEQRDFNSQQRRVRVVVENTIGQIKKFRVIGEGRFDHQRDFEPHVFELCARLTARIMRVRNAYPRSEEWLVNQVSTWESKL--GVFLWMDP 1440
            EF+D +     D   + R+ R+ D +FT  ENS R+        R+R+  +LM  R    F +     G  ++    DF+W+  Q    P LV E+ WP     +A+   L  A    P      Y+ DGTK    RN                  HY H        KG G +H+++ N  GKP+     + G  +D AA+  + ++ +PDA+L    +G+ DG ++    +++T   +    Q      +P +       N QQR +R  +E T G IK++ ++ +  F    D +   F LC +LTAR+MRVR+ YPR  +W+  +   WE +     +L++DP
Sbjct:  109 EFEDLHN----DVLDVLRLSRNSDCRFTEEENSLRKKRHFKFSSRERLFHFLMFCRHYPTFRKGGADVGMSKAALRGDFVWLRAQLKVHPLLVAEVQWPEPAAVEAERLLLVEAGLLGPGFEMCVYMCDGTKDLGRRN-----------------AHYGHKHEPDYSQKGNGKTHLLFTNLFGKPMMCAAGIQGCENDPAAYQMTHIYRDPDAYLLPNHSGLFDGVFQNALHVNTTESGVLPASQPELRKAAPPMRKMLAKMNKQQRYLRCPIEQTFGMIKQWGIVSDTVFRGSLDQQGDNFLLCTQLTARLMRVRDQYPRGAKWMRGEKEAWEEEWERDGWLYIDP 434          
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: A0A6H5K1A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1A5_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.480e-23
Identity = 84/242 (34.71%), Postives = 111/242 (45.87%), Query Frame = 1
Query:   19 DSGDEEQRREAMCVAASLL----IVDSATQTEQEEAEFEDLHKRLESDAMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLMGACVREAGKLLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVD 732
            + G  EQ+R+    AA+ L    +++  TQ E+ E E   L    E+   L+ +    G      L  I +          ER         V +  + LP  G+G SEAN AASN RR + + +G        TT       G          +A+ G    L R       +    EN ARR I+GT+ YRDR LCWLMMLR+  CFH M  L+GP  +TF RDF+WMT QA TL  L D
Sbjct:    4 EEGFTEQQRQLHAQAAAWLQERNVIELMTQLEEAEEEMGRLGDDDEAAYALSKQMGALGQQAEAGLQEILAIAQSVPESPGERAFRHTQLVSVNKLRRFLPTVGKGMSEANDAASNNRRQMVHAEGA------TTTSVLDPGMGV---------SARSGSTQALTRRSSTNSMRSWEDENMARRRIRGTMGYRDRALCWLMMLRQDFCFHTMEDLWGPSAATFQRDFVWMTTQATTLELLND 230          
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Match: A0A6H5JZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF6_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 5.640e-15
Identity = 64/202 (31.68%), Postives = 90/202 (44.55%), Query Frame = 1
Query:  223 FGMASHGVEERIRGSLMGACVREA-----GKLLPGPGRGRSEANAAASNTRRNLKYPD---GIYEAWCQETTCPFQRNTGFRRNEFDDFYTAQGGDEGHLFRVPRDIDGQF-TPAE------NSARRTIKGTLRYRDRVLCWLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPSMEERQAQAAFL 783
            F +   G +    G+L G   R +     G +  G   G S AN  AS  R  L++P    GI++A     +   +  TG  ++E D FY                  G+  T +E      N ARR I+G++  RDRVLCWL +LRR   F ++   +G    T+  +F  MT  A  +PCL  EI WP   E+ A   FL
Sbjct:   28 FTILGEGQQAAWHGNLAGRWKRSSLHLTEGIVQAGGWWGNSTANGTASRARLPLRFPSEEGGIHDA---HRSSQIRYKTGMEKDEVDAFYEDTFWMLRETVSPAHGCLGELGTTSETTRRRTNKARRVIRGSMDDRDRVLCWLEILRRDTLFEDVALAYGRCAGTYHNEFKDMTAAAQNMPCLQVEIQWPEPAEQAAHCTFL 226          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1163.1411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FMG8_ECTSI2.600e-20899.65Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JLH9_9PHAE1.570e-11856.27DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JMX0_9PHAE3.730e-8439.64DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KIX2_9PHAE5.500e-7248.15DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KWG0_9PHAE6.010e-4244.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLU9_9PHAE3.090e-4046.07Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI20_9PHAE1.120e-3728.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4JHM0_9EUKA1.520e-3128.24Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A6H5K1A5_9PHAE1.480e-2334.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZF6_9PHAE5.640e-1531.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1163contigEcto-sp13_S_contig1163:11618..15252 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1566
Hectar predicted targeting categoryother localisation
Exons4
Cds size1566
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462611.763794-CDS-Ecto-sp13_S_contig1163:11617..121991681462611.763794-CDS-Ecto-sp13_S_contig1163:11617..12199Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1163 11618..12199 -
1681462611.7756608-CDS-Ecto-sp13_S_contig1163:13205..133221681462611.7756608-CDS-Ecto-sp13_S_contig1163:13205..13322Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1163 13206..13322 -
1681462611.7856534-CDS-Ecto-sp13_S_contig1163:13839..139741681462611.7856534-CDS-Ecto-sp13_S_contig1163:13839..13974Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1163 13840..13974 -
1681462611.7956681-CDS-Ecto-sp13_S_contig1163:14520..152521681462611.7956681-CDS-Ecto-sp13_S_contig1163:14520..15252Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1163 14521..15252 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1163.1411.1prot_Ecto-sp13_S_contig1163.1411.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1163 11618..15252 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1163.1411.1

>prot_Ecto-sp13_S_contig1163.1411.1 ID=prot_Ecto-sp13_S_contig1163.1411.1|Name=mRNA_Ecto-sp13_S_contig1163.1411.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=522bp
MDGHESDSGDEEQRREAMCVAASLLIVDSATQTEQEEAEFEDLHKRLESD
AMLAAETAVEGDGESDDLFGIGSPFGMASHGVEERIRGSLMGACVREAGK
LLPGPGRGRSEANAAASNTRRNLKYPDGIYEAWCQETTCPFQRNTGFRRN
EFDDFYTAQGGDEGHLFRVPRDIDGQFTPAENSARRTIKGTLRYRDRVLC
WLMMLRRGCCFHEMTTLFGPGESTFCRDFLWMTIQAATLPCLVDEIAWPS
MEERQAQAAFLAATFHPRLANVAYIADGTKGAAMRNPTEPKDGRPKVRRA
VHGQHYSHNKGLGYSHIVYVNARGKPIRVETVSGRLSDRAAHTASRLFLE
PDAFLTLGETGMGDGNYRGDARMDSTGLEMCVPFQFSPNLTHEQRDFNSQ
QRRVRVVVENTIGQIKKFRVIGEGRFDHQRDFEPHVFELCARLTARIMRV
RNAYPRSEEWLVNQVSTWESKLGVFLWMDPGDAASYLVHGLVEDAEYDTD
MTAQQKAELLQGRWEAIWGAA*
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mRNA from alignment at Ecto-sp13_S_contig1163:11618..15252-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1163.1411.1 ID=mRNA_Ecto-sp13_S_contig1163.1411.1|Name=mRNA_Ecto-sp13_S_contig1163.1411.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3635bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1163:11618..15252- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATGGCCATGAAAGCGACAGTGGCGATGAGGAGCAGCGCCGTGAGGC GATGTGTGTTGCAGCGTCACTGCTGATCGTCGACAGTGCCACCCAGACTG AGCAGGAAGAGGCCGAGTTCGAGGATTTGCATAAGAGACTCGAGAGCGAC GCCATGCTTGCAGCGGAGACCGCGGTGGAAGGCGACGGTGAGAGCGATGA CCTCTTCGGGATAGGGTCCCCTTTCGGCATGGCGAGCCACGGGGTAGAAG AGAGGATCAGGGGTTCGTTGATGGGCGCCTGTGTGAGAGAGGCGGGGAAG TTGTTGCCTGGACCCGGGCGTGGACGGAGCGAGGCAAACGCCGCAGCATC GAACACGCGGCGAAACCTCAAATACCCGGACGGCATATATGAGGCGTGGT GCCAGGAGACTACGTGCCCTTTCCAACGCAACACGGGATTTAGGCGCAAC GAGTTCGACGACTTCTACACAGCGCAGGGCGGAGACGAAGGGCATCTCTT CAGAGTTCCAAGGGACATCGACGGGCAGTTCACGCCAGCTGAGAACAGTG CGCGACGTACGATCAAGGGAACGCTCCGCTACCGCGACCGAGTCCTGTGT TGGCTCATGATGCTTCGAAGGGGGTGTTGCTTCCACGAGATGACGACCTT GTTCGGGCCTGGCGAGTCGACCTTCTGCCGAGACTTTCTGTGGATGACGA TCCAGGCCGCAACTCTTCCTTGTCTGGTTGACGTGAGTTATGGTTGCATC GCTATGTGATTTGTACTCGTATTTCACACGCGTTCAGAGGCATCGCGATG TACCGTAAATGACACAAGATACCACGCCCCCAGGAACGAATGCCAAAGCT CAATTCCTCCACAGCAGTGCAAATAGTGCCGTTGCCGACACGTGTGGAGT TGGGACCGCGTCGTCGAGATAATTCCAAATACACGTCCTTTGATGTAGGG TTACTGTTGGTCGTGTCGTCAAGCTTTGTACATTAGACCGGGTGTGGTAT CTTACGTCACCCGCTGCTCCGTGTACATAGGACATGATAGTAGACCGCAC GCAGTCCGTAGTCGAGACCGCGTGTACGCTGAGCAGGTGGCGTACTGCTG TAGGAGCCTATAGGTTGTGATAGGTGAGGTTGTCAGCGGCGAACTTGAGC GGGCGACATTTTATGGCAATAACCTACACGAACACCCATACCTATGGCCT GACGCCGACCCTCACATGCACCCCCCCCCACACACACACACAAAATGCAC GCGCTTGCGACGTCGACATACTAAGCAGGAGATTGCGTGGCCGTCCATGG AAGAGCGTCAGGCACAGGCTGCTTTCCTCGCCGCCACTTTTCACCCTAGG CTTGCCAACGTCGCCTACATTGCGGACGGTACAAAGGGAGCCGCAATGCG CAATCCTACGGAGGTAGGTTGTCAACGTTTATTTCGAGTGTTTTATCTGG GAATGGCTGAGGGCTAGGGTCAGCGGCTGCGGGGTCCGCTATGGCTTTTA ATGTTCAAGGAGCGGATTGGTGTCGCTTCCCTTCGATTGCTTAGAGAAAC GCAGTTCGAACGGGATGGGCTAGGGCTTGTTGCTCGAGAAAACAGGCGGC AAGGCATGAGCTGGAAGGGCTTAGCTCCATCGTGTAAAGGTCACATTACA CGGCATAGGTTAGGCAGCCGAGAACCTCCAAATCACCCTTGGATTTTCGC TCAGTGTGTTTTGGGAAACTCCTCCCCGAATGCAGCAAGTATTTGCGCTT TCGATCGCCACAATGCCGCTACACACGTGCAGGTAGGTACATGACTGCGC TGTGCCTGGTGTGAAGGCGACTTCAGGCCAGATGTTGAAAGGGATACCTG CGGGCCCTTCGTTCGCTATCGCATCTCGCCTAACACACCACCCCCACCCC ACGGCGAACATGACACCCCCTCCTACGCAGCCCAAGGATGGTCGCCCGAA GGTTCGCAGGGCAGTGCACGGCCAGCACTACTCCCACAACAAGGGCCTGG GCTATAGCCACATCGTGTATGTCAACGCCCGGGGCAAACCAATACGGGTG AGATATCTCTACGAATGAAACTGAGTGTCGTACCTTCATTTGTAGCGGCA TGGCTTTGGCACAAAGGGTTACCTTGGGCATGAACGCGCGGTCGTCTGTT CCACGGGCCAACTGTTGGGCATTAAAATCGAAAGTGTTGGGGTAGGGACT GGGCGCCACTGGCTGTGGCTCATGTTTGCCTATCCGTCCCGGGCTGTCCA CCGTGCAAAACATCGCGCACTGCCTCAATGGTGTGTGCGTTGCGCCTCGC TCTCCCTCTTGTTGTCATCCCCCCCGACTCGCTACGAATACGAACGGTGA CCAGTACCTCCTCAGTGATTTTTAGCTACGTTATTTCACACAACCAACGA ACAGCACACTTCCCCAATAGTACACAACGAACAAGTTGGCAGCTGCTGAA CCCTGTGTGCACGCCTGGCTCTGTGTTTGTCAGTGACGGATGTTCCCCGT TTGTCACGGGGGTTCCACGTTGGTCGCTGATCGGTGACCTTCATCTCACG AGCAAACGCAACAGCAGGCGACCCTACTTGTGGGCTGAAGTTGGTCACAG CAGCGTCCTTCGTATGTACCTACCCTACAGTAGTAACTTGAAAAAATCCC GCCTCTGTCCGTGGTCGGTCGAGCGTCCCCACGCTTCGCGTCGTTCCCGA CCTAGCTAGCGACTTTCGGGCAATATGGAGGCACCAAGGCTGGGTTTTGT GGGACCCAGTCAAAATGATATTGTAGTGCTCGGGCGCAAGTGCTGCCTTG CAGTTCGGTGCGTAGGTGGTGGAACAGGCATCAAGCTTGTTTGTGTGAGC TCAACGCATGCACCAGAGAGCACCGACGCCATATTGTTTTACTACCTTGC GCCAAGCGTTTGCATGTGTAGGTGCGCTAGGGATGAAAGATGGTGAGAAA GTAACTGCCCACCGCGGGTCATGGCCTGGACGGTGCGGCGTTGTCATTTC TTCCTGCCTCATGTCCCCCGTGTTCAACCTTTTCCGCGAACGTATCGATA TAGGTGGAAACGGTATCTGGGCGGCTGTCTGACCGAGCTGCCCACACGGC CTCAAGGCTGTTCTTGGAGCCGGATGCGTTCCTGACGTTAGGGGAGACGG GTATGGGCGACGGCAACTATCGCGGGGATGCGAGGATGGACTCAACGGGC CTCGAGATGTGTGTCCCGTTCCAGTTTTCACCCAACTTGACGCATGAGCA AAGGGATTTCAACTCTCAGCAGAGGAGGGTCCGTGTTGTGGTGGAGAATA CGATTGGCCAAATCAAGAAGTTCCGAGTCATCGGGGAGGGGAGATTTGAT CACCAGCGGGACTTCGAGCCGCATGTGTTTGAGTTGTGTGCAAGGTTGAC GGCGAGGATAATGCGCGTGCGGAACGCCTACCCCCGTAGCGAGGAGTGGT TAGTGAACCAGGTCTCGACATGGGAGTCGAAGCTCGGGGTGTTCTTGTGG ATGGACCCCGGCGATGCGGCGTCGTATCTAGTTCACGGTTTGGTTGAGGA CGCGGAATACGACACTGACATGACTGCCCAGCAGAAGGCTGAACTGCTGC AGGGCCGGTGGGAAGCAATCTGGGGGGCAGCGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1163:11618..15252-

>mRNA_Ecto-sp13_S_contig1163.1411.1 ID=mRNA_Ecto-sp13_S_contig1163.1411.1|Name=mRNA_Ecto-sp13_S_contig1163.1411.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1566bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1163:11618..15252- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGATGGCCATGAAAGCGACAGTGGCGATGAGGAGCAGCGCCGTGAGGC
GATGTGTGTTGCAGCGTCACTGCTGATCGTCGACAGTGCCACCCAGACTG
AGCAGGAAGAGGCCGAGTTCGAGGATTTGCATAAGAGACTCGAGAGCGAC
GCCATGCTTGCAGCGGAGACCGCGGTGGAAGGCGACGGTGAGAGCGATGA
CCTCTTCGGGATAGGGTCCCCTTTCGGCATGGCGAGCCACGGGGTAGAAG
AGAGGATCAGGGGTTCGTTGATGGGCGCCTGTGTGAGAGAGGCGGGGAAG
TTGTTGCCTGGACCCGGGCGTGGACGGAGCGAGGCAAACGCCGCAGCATC
GAACACGCGGCGAAACCTCAAATACCCGGACGGCATATATGAGGCGTGGT
GCCAGGAGACTACGTGCCCTTTCCAACGCAACACGGGATTTAGGCGCAAC
GAGTTCGACGACTTCTACACAGCGCAGGGCGGAGACGAAGGGCATCTCTT
CAGAGTTCCAAGGGACATCGACGGGCAGTTCACGCCAGCTGAGAACAGTG
CGCGACGTACGATCAAGGGAACGCTCCGCTACCGCGACCGAGTCCTGTGT
TGGCTCATGATGCTTCGAAGGGGGTGTTGCTTCCACGAGATGACGACCTT
GTTCGGGCCTGGCGAGTCGACCTTCTGCCGAGACTTTCTGTGGATGACGA
TCCAGGCCGCAACTCTTCCTTGTCTGGTTGACGAGATTGCGTGGCCGTCC
ATGGAAGAGCGTCAGGCACAGGCTGCTTTCCTCGCCGCCACTTTTCACCC
TAGGCTTGCCAACGTCGCCTACATTGCGGACGGTACAAAGGGAGCCGCAA
TGCGCAATCCTACGGAGCCCAAGGATGGTCGCCCGAAGGTTCGCAGGGCA
GTGCACGGCCAGCACTACTCCCACAACAAGGGCCTGGGCTATAGCCACAT
CGTGTATGTCAACGCCCGGGGCAAACCAATACGGGTGGAAACGGTATCTG
GGCGGCTGTCTGACCGAGCTGCCCACACGGCCTCAAGGCTGTTCTTGGAG
CCGGATGCGTTCCTGACGTTAGGGGAGACGGGTATGGGCGACGGCAACTA
TCGCGGGGATGCGAGGATGGACTCAACGGGCCTCGAGATGTGTGTCCCGT
TCCAGTTTTCACCCAACTTGACGCATGAGCAAAGGGATTTCAACTCTCAG
CAGAGGAGGGTCCGTGTTGTGGTGGAGAATACGATTGGCCAAATCAAGAA
GTTCCGAGTCATCGGGGAGGGGAGATTTGATCACCAGCGGGACTTCGAGC
CGCATGTGTTTGAGTTGTGTGCAAGGTTGACGGCGAGGATAATGCGCGTG
CGGAACGCCTACCCCCGTAGCGAGGAGTGGTTAGTGAACCAGGTCTCGAC
ATGGGAGTCGAAGCTCGGGGTGTTCTTGTGGATGGACCCCGGCGATGCGG
CGTCGTATCTAGTTCACGGTTTGGTTGAGGACGCGGAATACGACACTGAC
ATGACTGCCCAGCAGAAGGCTGAACTGCTGCAGGGCCGGTGGGAAGCAAT
CTGGGGGGCAGCGTAG
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