mRNA_Ecto-sp13_S_contig11613.1395.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: D7FJA1_ECTSI (Putative Leucine Rich Repeat Protein Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJA1_ECTSI) HSP 1 Score: 489 bits (1260), Expect = 6.340e-165 Identity = 386/398 (96.98%), Postives = 388/398 (97.49%), Query Frame = 1
Query: 637 MCLLPGIVLRSGLVFQRVTALSMPGQGIGDGDVPASVVRLAGVLRKVDLSGNRLTAVPPGLLGLGAGLEDLNLGNNDISEMPPEIAKLGGLLFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRLAVNPGLTVVPEGLTYAEKLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXX------DGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQV 1812
MCLLPGIVLRSGLVFQRVTALSMPGQGIGDGDVPASVVRLAGVLRKVDLSGNRLTAVPPGLLGLGAGLEDLNLGNNDI+EMPPEIAKLGGLLFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRLAVNPGLTVVPEGLTYAEKLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAG YRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVV ASSTKPSG S SG+ESEVAXXXXXXXXXXXXXXXXXXXXXX DGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQV
Sbjct: 1 MCLLPGIVLRSGLVFQRVTALSMPGQGIGDGDVPASVVRLAGVLRKVDLSGNRLTAVPPGLLGLGAGLEDLNLGNNDIAEMPPEIAKLGGLLFFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRLAVNPGLTVVPEGLTYAEKLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGVYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVHASSTKPSGRSSSGSESEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQV 398
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: A0A6H5L0B3_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B3_9PHAE) HSP 1 Score: 251 bits (641), Expect = 6.520e-73 Identity = 152/165 (92.12%), Postives = 154/165 (93.33%), Query Frame = 1
Query: 1318 TSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXXDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQV 1812
TSFP+IPREEVVLGERLGSGASGEVFAG YRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVV ASS KPSGGS S +ESEVA XXXXXXXXXXXXXXXXX D IENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQV
Sbjct: 33 TSFPDIPREEVVLGERLGSGASGEVFAGVYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVHASSIKPSGGSISRSESEVAAXXXXXXXXXXXXXXXXXG---DEIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQV 194
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: A0A5J4XR07_9CHLO (Kinase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XR07_9CHLO) HSP 1 Score: 104 bits (259), Expect = 4.880e-20 Identity = 64/179 (35.75%), Postives = 87/179 (48.60%), Query Frame = 1
Query: 1255 LAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXXDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLV 1791
LAW+SLAG+ C A R + ++ + LG GASG+VFA ++ RDVA+K+FKA+ PDG+ARDE+ V VDHPNL K +G+ I++ LV+ER+ G PLA KP+F S+LRCRW G+ F V
Sbjct: 231 LAWLSLAGNPACQPAPPIR--PDILPLTLSQLDIATALGDGASGDVFAAKFQERDVAIKIFKAESSPDGHARDEIAVTCFVDHPNLIKVIGI---------------------------------------------IDHPHALVLERIWGVPLALKPNFESLLRCRWTPGQTFTAAFV 362
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: A0A8J9S5V3_9CHLO (Probable leucine-rich repeat-containing protein 7 at N-terminal half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S5V3_9CHLO) HSP 1 Score: 98.2 bits (243), Expect = 5.210e-18 Identity = 65/186 (34.95%), Postives = 83/186 (44.62%), Query Frame = 1
Query: 1255 LAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXXDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQV 1812
LAW+SLAG+ C R ++ E + LG LG GASG+VFA G +VAVKVFK ++ PDG A DE+ V V+HP+LT+ L +Q LV++RV GRPLA KP+ S+LRCRW F V V L V
Sbjct: 219 LAWMSLAGNPACPPPPV---RGHIADVTIEHLSLGVPLGEGASGDVFAAHMEGEEVAVKVFKGEVSPDGKAADEIAVTCYVNHPHLTRVLATLQQPHA---------------------------------------------LVLKRVAGRPLAAKPNLQSLLRCRWPPDAAFSSAFVARVALCV 356
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: A0A836C659_9CHLO (Protein kinase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C659_9CHLO) HSP 1 Score: 97.8 bits (242), Expect = 8.700e-18 Identity = 63/187 (33.69%), Postives = 88/187 (47.06%), Query Frame = 1
Query: 1252 KLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXXDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQV 1812
+LAW S+AG+ C P + REE+ LG++LG GASG+VF +RG VAVK F+AD+ PDG DE+ +A+ + HP+LT+ LG V+ PSG LV+ G+PLA KP + +LRC+W RF LA+ +V
Sbjct: 264 RLAWFSVAGNPACPDPPPPA--PGLPLVAREELELGQKLGDGASGDVFRAVWRGELVAVKFFRADVSPDGRTEDEVALAIALQHPHLTQVLGRVE----HPSG-----------------------------------------LVLRLESGKPLAHKPTSAHLLRCKWADETRFPLPRALALAARV 403
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: A0A2K3DNM2_CHLRE (Protein kinase domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DNM2_CHLRE) HSP 1 Score: 96.3 bits (238), Expect = 3.000e-17 Identity = 66/201 (32.84%), Postives = 94/201 (46.77%), Query Frame = 1
Query: 1189 LCRLAVNPGLTVVPEGLTYAE---KLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXXDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEP 1782
L R+AV ++ P+ L A +LAW S+AG+ C P + EE+ LG++LG GASG+V+ +RG+ VAVK F+AD+ PDG DE+ +A+++ HP+LT+ L V+ KP G LV+ G PLA KP +LRC+WG RF P
Sbjct: 247 LLRVAVCDIKSLPPQLLQDAAALPRLAWFSVAGNPVCP--GPPAPAPGLPVVAPEELELGQKLGDGASGDVYRAVWRGQLVAVKYFRADVSPDGRTEDEVALAVSLQHPHLTQVLARVE----KPHG-----------------------------------------LVLRLEAGSPLAAKPTSQHLLRCKWGDDVRFPP 400
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: A0A7J7QFY5_9CHLO (Protein kinase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QFY5_9CHLO) HSP 1 Score: 95.9 bits (237), Expect = 4.140e-17 Identity = 87/207 (42.03%), Postives = 114/207 (55.07%), Query Frame = 1
Query: 1189 LCRLAVNPGLTVVPEGLTYAEKL---AWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXXDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAV 1800
L RLAV L P GL A+ L AW S+ + A + P + R + +GE+LG GASGEVF G Y GR VAVK+F AD+ PDG+ +E+ + V HPNLT+ L +V ++ XXXXXXXXXXXXXXXXXXX G + LV+E V G+PLA++P +LRC+WG F L++
Sbjct: 241 LFRLAVGQ-LRQWPAGLAEADSLPMLAWCSIGRNP--AAVAVPAVAAELPRVDRWALQVGEKLGQGASGEVFLGVYEGRSVAVKIFIADVSPDGSTAEEMAINCAVRHPNLTRVLALV----------------TDTQQXXXXXXXXXXXXXXXXXXXGDAGA--IVGLVLELVHGKPLADRPTSRHLLRCKWGGDVSFSLPAALSI 426
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: A0A150GRA6_GONPE (Protein kinase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GRA6_GONPE) HSP 1 Score: 94.0 bits (232), Expect = 1.050e-16 Identity = 56/175 (32.00%), Postives = 83/175 (47.43%), Query Frame = 1
Query: 1252 KLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXXDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRF 1776
+LAW S+AG+ C R PE+ +E+ LG++LG GASGEV+ ++G VAVK F++D+ PDG DE+ +A+ + HP++T+ L V+ P G LV+ V G PLA KP + +LRC+WG +F
Sbjct: 193 RLAWFSVAGNPACPEPPA--REAVLPEVDEDELELGQKLGDGASGEVYRAIWKGELVAVKFFRSDVSPDGRTEDEVALAIALQHPHVTQVLAKVRY----PHG-----------------------------------------LVLRLVTGTPLAHKPTSAHLLRCKWGGDVQF 320
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: A0A835TFM4_CHLIN (Protein kinase domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TFM4_CHLIN) HSP 1 Score: 94.4 bits (233), Expect = 1.220e-16 Identity = 66/201 (32.84%), Postives = 93/201 (46.27%), Query Frame = 1
Query: 1189 LCRLAVNPGLTVVPEGLTYAE---KLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXXDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEP 1782
L R+AV ++ P+ L A +LAW S+AG+ C P + EE+ LG++LG GASG+VF +RG+ VAVK F+AD+ PDG DE+ +A+ + HP+LT+ L V +P G LV+ G PLA KP + +LRC+WG RF P
Sbjct: 246 LLRVAVCSIQSLPPQLLQDAAAMPRLAWFSVAGNPVCP--GPPCAAPGLPVVAPEELELGQKLGDGASGDVFRAVWRGQLVAVKFFRADVSPDGRTEDEVALAIGLQHPHLTQVLARV----LEPHG-----------------------------------------LVLRLETGSPLAHKPTSAHLLRCKWGDDVRFPP 399
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Match: A0A7S1CVX0_9CHLO (Hypothetical protein n=1 Tax=Picochlorum oklahomense TaxID=249345 RepID=A0A7S1CVX0_9CHLO) HSP 1 Score: 94.0 bits (232), Expect = 1.770e-16 Identity = 64/196 (32.65%), Postives = 90/196 (45.92%), Query Frame = 1
Query: 1225 VPEGLTYAEKLAWVSLAGSAWCARASEKRRRTSFPEIPREEVVLGERLGSGASGEVFAGAYRGRDVAVKVFKADIGPDGNARDELDVALTVDHPNLTKSLGVVQASSTKPSGGSCSGAESEVAXXXXXXXXXXXXXXXXXXXXXXDGIENLRWLVMERVVGRPLAEKPDFSSVLRCRWGSGRRFEPVLVLAVLLQV 1812
+PE L A L+W+S+AG+ ++ S P + ++V++G++LG GASGEVF G Y+ + VAVK+F+ D PDG+ DE+ +A + NL L + P G +VME V G PLA KP+ SVLRCRW G+ F VL L V
Sbjct: 267 IPESLMNAHSLSWLSIAGNPLAGSL----KKPSAPCVSIDDVMVGKKLGDGASGEVFEGEYKKKQVAVKLFRKDTSPDGHCEDEIAIACMLHDDNLVNVLARID----HPHLG----------------------------------------VVMEYVEGSPLALKPNKDSVLRCRWKEGQLFPISFVLRCLSSV 414 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11613.1395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11613.1395.1 >prot_Ecto-sp13_S_contig11613.1395.1 ID=prot_Ecto-sp13_S_contig11613.1395.1|Name=mRNA_Ecto-sp13_S_contig11613.1395.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=604bp KTSNQKEKVDLGDDEDRSLPPSGIGSSSGGASSSTCDCECHNKGSSRKRRback to top mRNA from alignment at Ecto-sp13_S_contig11613:621..4218- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11613.1395.1 ID=mRNA_Ecto-sp13_S_contig11613.1395.1|Name=mRNA_Ecto-sp13_S_contig11613.1395.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3598bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11613:621..4218- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11613:621..4218- >mRNA_Ecto-sp13_S_contig11613.1395.1 ID=mRNA_Ecto-sp13_S_contig11613.1395.1|Name=mRNA_Ecto-sp13_S_contig11613.1395.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1812bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11613:621..4218- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |