mRNA_Ecto-sp13_S_contig11521.1331.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: D7FI14_ECTSI (SF3b1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI14_ECTSI) HSP 1 Score: 707 bits (1826), Expect = 4.990e-250 Identity = 421/423 (99.53%), Postives = 422/423 (99.76%), Query Frame = 1
Query: 1 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXX SHPASRASVNAPRHL+DGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG
Sbjct: 1 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXX-SHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 422
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: A0A6H5JJ74_9PHAE (TOG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE) HSP 1 Score: 669 bits (1726), Expect = 6.160e-227 Identity = 415/485 (85.57%), Postives = 417/485 (85.98%), Query Frame = 1
Query: 1 MANVDEEIKALQKERESGIVATADGEDDGGDGXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRR--------------------------------------------------------------WDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
MANVDEEIKALQKERESGIVA ADGEDDGGD XXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVV XXXXXXXXXXXXXXXXXXXX SHPASRASVNAPRHL+DGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDV R WDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGG+TPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG
Sbjct: 1 MANVDEEIKALQKERESGIVAAADGEDDGGDXXXXXXXXGQVALTGAGAYDRDIYGGGGDKFAGVSRTVVEXXXXXXXXXXXXXXXXXXXX-SHPASRASVNAPRHLLDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVIMRKAAKQAEEAASLKRSVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGITPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 484
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: A0A835Z3L3_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L3_9STRA) HSP 1 Score: 151 bits (382), Expect = 4.560e-36 Identity = 153/448 (34.15%), Postives = 199/448 (44.42%), Query Frame = 1
Query: 121 QVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMR-AGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDV------------------------------------------------KRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTP---------------GQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPN-LAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
+V L G +D DIYGGG DKFAG S +V SHP++R ++ P + E GG+D + A R +GGSG+VNT I++RE+ Y A+ RRN+++SP RG DAF+G+TP RS++DIM Q L ++K+ +RRWD+ + TP + S WDA+ TP GG SRWDQTP R + G + G TP+A S+WDD TP+AGG G + TP G TP G + MTP XXXXXXXX GM TP+P +A A A EPMTPELAQ+MRWERE++ERNRP+TDE+LDA+FP AG
Sbjct: 32 KVGLLSVGGFDTDIYGGG-DKFAGFSSAIVDEQEEADGDTEVISHIGAA---SHPSTRMAI--PAKAL----EAAGGEDASDPFAQYRESGGSGLVNTRISDRETDYHAR-RRNRLLSPDRG-DAFSGKTPARSYKDIMINQDLDRQKEELLAAARKKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRRRWDES-----------EATPVMKPSASGWDAE--TPXXXXXXXXXXXXXXXXAGGK------SRWDQTPVRGDGAAAALGGAXXXXXXXXXXXXXXXGADS----GATPRA-SRWDDATPKAGGAGGV------------EATPGVGATPXXXXXXXXXXXXMVGGVRATSLIGMTPGGAMTXXXXXXXX--GMATPTPGAIAAAQAAAAQEPMTPELAQRMRWEREVEERNRPMTDEELDALFPDAG 429
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: UPI0019D68D7C (splicing factor 3B subunit 1-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D68D7C) HSP 1 Score: 123 bits (308), Expect = 1.810e-26 Identity = 136/434 (31.34%), Postives = 173/434 (39.86%), Query Frame = 1
Query: 148 YDRDIYGGGG---DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQ-TP---TRSFRDIMAEQALAKEKDV--------------------------------KRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGG------VTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQ---------------AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
+D D+YGGGG ++FAG ++ ++PA R H I + DDD GG + I +RE Y+ + R NQ+ISP R AG+ TP R++ D+M + AL K+K+ + RWD AG A K SDWDA ATP G G RWD TP R TP RR+ RWD++ G TP AGGVTPG TP WD TP+ GG TP +++SRWD+TP AG TPG TP + TP+P+ G PMTPE Q MRWER+++ERNRPLTDE+LDAMFP G
Sbjct: 35 FDTDLYGGGGADPNRFAGYDTSI---------PASEDDAAEEDTEAANPAPRRLAAYTGHAIAAADLPRSADDD---------GGLPKRSQRIIDREDDYRRR-RLNQIISPERHDPFAAGEATPDPSVRTYADVMRDAALQKKKEDLLREIAXXXXXXXXXXXXXXXXXXXXXXXXXRRNRWDQSQDSDAGAGA------KKAKTSSDWDAPDATP-----GIG-------------------RWDATPGRVGDATPSVRRN-RWDETPTPGRMADADATPAAGGVTPGA---TPSG--AWD-ATPKLPGGVTP--TPGKKQRSRWDETPASMGSAXXGGLGAATPAGYTPGPTPFGA-------------------ENLATPTPSQIARG------PMTPEQYQLMRWERDIEERNRPLTDEELDAMFPQEG 385
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: K3YPC2_SETIT (TOG domain-containing protein n=6 Tax=Setaria TaxID=4554 RepID=K3YPC2_SETIT) HSP 1 Score: 120 bits (301), Expect = 1.440e-25 Identity = 137/435 (31.49%), Postives = 172/435 (39.54%), Query Frame = 1
Query: 148 YDRDIYGGGG---DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQ-TP---TRSFRDIMAEQALAKEK-DVKR--------------------------------RWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGG------VTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQ---------------AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
+D D+YGGGG ++FAG ++ ++PA R H I + DDD R I +RE Y+ + R NQ+ISP R AG+ TP R++ D+M + ALAK+K D+ R RWD A A K SDWDA ATP G G RWD TP R TP RR+ RWD++ G TP AGGVTPG TP WD TP+ GG TP +++SRWD+TP AG TPG TP + TP+P+ G PMTPE Q MRWER+++ERNRPLTDE+LDAMFP G
Sbjct: 34 FDTDLYGGGGADPNRFAGYDTSI---------PASEDDAAEDDTEAANPAPRRLAAYTGHAIAAADLPRSADDDALPKRSQR----------IIDREDDYRRR-RLNQIISPERHDPFAAGEATPDPSVRTYADVMRDAALAKKKEDLMREIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRWDQSQDSDAAAGA------KKAKTSSDWDAPDATP-----GIG-------------------RWDATPGRVGDATPSVRRN-RWDETPTPGRMADADATPAAGGVTPGA---TPSG--AWD-ATPKLPGGVTP--TPGKKQRSRWDETPASMGSAXXGGLGAATPAGYTPGPTPFGA-------------------ENLATPTPSQIARG------PMTPEQYQLMRWERDIEERNRPLTDEELDAMFPQEG 384
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: A0A3L6EY90_MAIZE (Splicing factor 3B subunit 1 n=3 Tax=Magnoliopsida TaxID=3398 RepID=A0A3L6EY90_MAIZE) HSP 1 Score: 120 bits (301), Expect = 1.620e-25 Identity = 129/401 (32.17%), Postives = 164/401 (40.90%), Query Frame = 1
Query: 148 YDRDIYGGGG---DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQ-TPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAV--GKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGG------VTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQA---------------GVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
+D D+YGGGG ++FAG ++ ++PA R H I + DDD+ G + I +RE Y+ + R NQ+ISP R AG+ TP S R A K ++ RWD DGD K SDWDA ATP G G RWD TP R TP RR+ RWD++ G TP AGG TPG TP WD TP+ GG TP +++SRWD+TP + G TPG TP + TP+P+ G P+TPE Q MRWER+++ERNRPLTDE+LDAMFP G
Sbjct: 8 FDTDLYGGGGADPNRFAGYDTSI---------PASEDDAAEDDTELANPAPRRLAAYTGHAIAAADLPRSADDDD---------GLPKRSQRIIDREDDYRRR-RLNQIISPERHDPFAAGEATPDPSVRTYADPAAATKRRN---RWDQS--------QDGDAASGAKKAKTSSDWDAPDATP-----GIG-------------------RWDATPGRVGDATPSVRRN-RWDETPTPGRMADADATPAAGGATPGA---TPSG--AWD-ATPKLPGGVTP--TPGKKQRSRWDETPASMGSAXXGGLGAATPVGYTPGPTPFGA-------------------ENLATPTPSQIARG------PITPEQYQLMRWERDIEERNRPLTDEELDAMFPQEG 320
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: A0A2P4X7D7_9STRA (Splicing factor 3B subunit 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7D7_9STRA) HSP 1 Score: 117 bits (293), Expect = 7.210e-25 Identity = 141/398 (35.43%), Postives = 177/398 (44.47%), Query Frame = 1
Query: 124 VALTGAGAYDRDIYGGGG-DKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMR-AGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKE------KDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVT--RRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQ--AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPM----TPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
V+L+ G +D+DIYG G D+FAG S TV H S+ + AP DG DD+ A R A GSG+VNT I +RE+AY+ K R +M+SP RG DAF +TP RS+++IM Q L +E K ++R D D TP + WD + T T G T S WD T R SSRWD TP+AG VG TP + + G S+WD TP G TP T XXXXXXXXXXXXS M TP NL G + M TPELAQ++RWERE+++RNRP+TDE+LDA+FP G
Sbjct: 10 VSLSSTGQFDQDIYGSSGTDRFAGYSATVTEEGDEDEQQTEDH----------HSRSKNTSKAPHQGGDGLI-----DDNYDPFAEAREANGSGLVNTRIVDRENAYR-KRRFERMLSPERG-DAFGDKTPARSYKEIMQTQQLEQERAEVVRKIQQKREXXXXXXXXXXXXDVDATPKRRRKRMRWDQEGPT------------TDGET---------QSEWDTASESSVSSVAATPTRGSSRWD------ATPVAGST----VGATPGRKNXXXXXXXASSG------------TSKWDATPVNLGGATPVGT-----------XXXXXXXXXXXXSDMATPGKNLQMTPGGSMTDIMSGALTPELAQRLRWEREIEDRNRPMTDEELDALFPATG 336
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: F0W6T1_9STRA (Uncharacterized protein AlNc14C26G2567 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6T1_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.130e-24 Identity = 134/422 (31.75%), Postives = 174/422 (41.23%), Query Frame = 1
Query: 121 QVALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMRA-GGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKE------------------------------KDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSK------WDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXS--GMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
+V LT G YD+DIYG D G T+ H A A + + L +G D+D+ A +A GSG+VNT I +RE++Y+ K R ++++SP R D F G+TP RS++DIM Q L E K K RWDD G+ G+ D T V SS G WD S A+++ + R SSRWD VTP+AGG SK WD ETP +S+WDQT + TP+ G XXXXXXX G +TPS + L GA MTPE+AQ++RWERE++ERNRPL DE+LD MFP G
Sbjct: 8 RVGLTSKGQYDQDIYGTN-DDLEGFDHTL-----------------GPEEDKEHNAKNAKSSDKQKLTEGLV-----DEDHDPFADAQAENGSGVVNTRIIDRENSYR-KRRFDRILSPERS-DVFDGKTPQRSYKDIMQSQQLEAERAEVIRKIQKQQEEQSANEKLEXXTGNEKVKKRKMRWDDPGSATGSGI------------------DAKTDVESSSG----------------------WDTDESSMAEDSNLGR-SSRWD------VTPLAGGQEGSXXXXXXATKSKGEKIGRWD-------------ETPKASSESKWDQTTVTPIANMMTPLGGTSKRSXXXXXXXSSNDIATPQRGQMTPSGAITNDLLTGA---MTPEMAQRLRWEREIEERNRPLADEELDTMFPSTG 341
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: A0A662WMW2_9STRA (SF3b1 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMW2_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.140e-24 Identity = 135/389 (34.70%), Postives = 173/389 (44.47%), Query Frame = 1
Query: 124 VALTGAGAYDRDIYGGGGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMR-AGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK-DVKRRWD---DGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTP--QAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
VALT AGA+D++IYG GGD+FAG S T+ ASR++ + GG+ DD A R A GSG+VNT I +RE++Y+ K R ++M+SP RG DAF G+TP RS++DIM Q L E+ +V R+ + + VA + G DA + XXXXXXX TP TR SSRWD TP AGS R SG S+WD TP GVTP XXXX +TP ++A + GA +TPELAQ+MRWERE++ERNRPL DE+LDA+FP G
Sbjct: 38 VALTAAGAFDQEIYGAGGDRFAGYSATIADEGDDAEEKEGDETA----------ASRSTTTTNKVATQGGDGLI--DDSYDPFAEAREANGSGLVNTRIVDRENSYR-KRRFDRMLSPERG-DAFGGKTPARSYKDIMQGQQLDMERAEVVRKIQQKREEEAELQEQVAKTQQAQISGAAGETGDATPKRRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTP-TRTSSRWDA--------------------TPVAGSAAAATPMRKXXXXXXXXXRSGSSSSKWDATPVNMGGVTPAAGSGKXXXXXXXXXXGGNDMATPRKGVQMTPGGSMAADIMSGA---LTPELAQRMRWEREIEERNRPLADEELDALFPATG 388
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Match: H3G976_PHYRM (SF3b1 domain-containing protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3G976_PHYRM) HSP 1 Score: 117 bits (292), Expect = 2.030e-24 Identity = 123/393 (31.30%), Postives = 164/393 (41.73%), Query Frame = 1
Query: 124 VALTGAGAYDRDIYGG-GGDKFAGVSRTVVXXXXXXXXXXXXXXXXXXXXXXSHPASRASVNAPRHLIDGGEEREGGDDDNSTIAGMRAGGSGMVNTVIAERESAYQAKGRRNQMISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK-DVKRRWDD---GGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPG------GVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAG 1269
V L+ G +D+DIYG GG++FAG S TV S P A LID ++ + + GSG+VNT I +RE++Y+ K R +M+SP RG DAF +TPTRS+++IM Q L +E+ +V R+ + D TP + WD + A P + G S WD + +R SSRWD TP+A TPG SKWD GG AG P TPG+ S +TP ++A + GA +TPELAQ+MRWERE++ERNRPLTDE+LDAMFP G
Sbjct: 10 VGLSSTGQFDQDIYGAAGGERFAGYSATVTEEEDVDASAEDHR---------SRPKPVAMQGGGDGLID--------ENYDPFAEARESNGSGLVNTRIVDRENSYR-KRRFERMLSPERG-DAFGDETPTRSYKEIMQTQQLQQERAEVVRKIQQQRXXXXXXXXXXQEVDVTPKRRRKRMRWDQE-APPAEKTDG-----------------ESQSEWDTASESSSAAATPSRTSSRWD------ATPVA--ATPGKKNXXXXXXXXSTESSKWDATPVNLGGVTPAGTXXXXXXXXXXXSGPSDMATPGK------------------------SVQMTPGGSVAAGMMSGA---LTPELAQRMRWEREIEERNRPLTDEELDAMFPATG 330 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11521.1331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11521.1331.1 >prot_Ecto-sp13_S_contig11521.1331.1 ID=prot_Ecto-sp13_S_contig11521.1331.1|Name=mRNA_Ecto-sp13_S_contig11521.1331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=424bp MANVDEEIKALQKERESGIVATADGEDDGGDGGEGDGADGQVALTGAGAYback to top mRNA from alignment at Ecto-sp13_S_contig11521:663..5242+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11521.1331.1 ID=mRNA_Ecto-sp13_S_contig11521.1331.1|Name=mRNA_Ecto-sp13_S_contig11521.1331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4580bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11521:663..5242+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11521:663..5242+ >mRNA_Ecto-sp13_S_contig11521.1331.1 ID=mRNA_Ecto-sp13_S_contig11521.1331.1|Name=mRNA_Ecto-sp13_S_contig11521.1331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1272bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11521:663..5242+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |