mRNA_Ecto-sp13_S_contig11509.1324.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11509.1324.1
Unique NamemRNA_Ecto-sp13_S_contig11509.1324.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: A0A6H5JZJ2_9PHAE (S5A_REDUCTASE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZJ2_9PHAE)

HSP 1 Score: 690 bits (1780), Expect = 7.830e-250
Identity = 346/364 (95.05%), Postives = 352/364 (96.70%), Query Frame = 1
Query:    1 CTLLAQSEGFFAAPNTPTTHSKLASDLNGRTNGHGQLAARSDSKSRGSSPALGAAGSRERLFETVTTLRGGSPAMKIPGYDAAAAAIAAISVPAIAWTGGPALFAQGVLLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYIGVSQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVPGTRQYTWEKAETK 1092
            CTLLAQSEGFFAAPNTPTTHSKLASD NGRTNGHGQ  ARSDS S GSS ALGAAGSRERLFETVTTLRGGSPAMKIPGYDAAAAAIAAIS+PAIAWTGGPALFAQGVLLSM+TSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRD LHTLSALHAAGLVAYGLRLASFCGWRD+LSCFQNRRKR  QPKKQNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSY+GVSQAGLAVMAVGLLVESVADLQKS+FKKKSPDTFCSTGLYRFSRHPNY GEAVFWTGAWLAAIPAY KWYHWVFSVIGPSQIVSIILRATGGLEKRQ EKYGSSKEWKEYAKSTPVFVPGTRQY+WEKAETK
Sbjct:   21 CTLLAQSEGFFAAPNTPTTHSKLASDSNGRTNGHGQFVARSDSGSGGSSAALGAAGSRERLFETVTTLRGGSPAMKIPGYDAAAAAIAAISIPAIAWTGGPALFAQGVLLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDKLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRPTQPKKQNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYRFSRHPNYLGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGTRQYSWEKAETK 384          
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: A0A7S2WAP1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAP1_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.780e-44
Identity = 105/255 (41.18%), Postives = 143/255 (56.08%), Query Frame = 1
Query:  322 VLLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLF----------RDNLHTLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYIGVSQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVPG 1056
            VLLS+ +S  GF     FVS GYG S+A  + G A L           +  L  L+ LHA GL+ YGLRL +F  WR  +   Q R++  A   K         W   S+L+  +  P  YA R   A   S   V   G+AV+ +G+++E+VADLQK+V+K +S ++FCS GL+RF RHPNY GE + + G++LAAI A  KW+ W  S  G S I+SI+  AT  LE +Q E YG+  E++EY   T   VPG
Sbjct:   88 VLLSLASSSLGFSSVTSFVSTGYGLSMA--SMGVATLAAVLSKGGGGDKGGLDPLAMLHAGGLLVYGLRLFTFLAWRSRIP--QIRQRLRAVDAKVTGASKAVLWLCVSLLFPAMFSPVHYACRA-GAPLASQPSVQGTGIAVLWLGVVLEAVADLQKAVWKHRS-NSFCSVGLFRFVRHPNYLGEILVYCGSYLAAIQAMEKWHQWAISTFGLSTILSIMRSATLSLEAKQGELYGALAEYQEYKDKTSCLVPG 336          
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: A0A7S1H721_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H721_HEMAN)

HSP 1 Score: 162 bits (410), Expect = 9.090e-43
Identity = 96/255 (37.65%), Postives = 141/255 (55.29%), Query Frame = 1
Query:  295 GGPALFAQGVLLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYIGVSQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVPGT 1059
            G PA FA    +S++ S  GF    +FV YGY  S+    +     F       +  HA G++A+G R+ +F  +R+  +  Q + +     KK       + W   S+ YA L  P ++ L+    A  S   +++ GL V AVGLL+ES +D  KS FK+ SP++F S+GLYRF RHPNYFGE +FW G++ A + +      W  + +G + IV+I+L+AT  LEK+QA KY    E+ EY KSTP  +P T
Sbjct:   44 GLPAAFA----VSLIASAVGFISAVYFVGYGYALSMIALGSVTLQRFMATASQPAVYHAVGVIAWGARILTFLLYREFFAWKQLKERNRETNKKFAFTAKVSTWLFVSIFYALLFSPVLFHLQ----AASSIPVLTKTGLGVAAVGLLIESQSDAAKSSFKQSSPESFMSSGLYRFCRHPNYFGEVIFWGGSYAAGVGSLTSPLAWTSASLGMAGIVAIMLQATESLEKKQALKYAELPEYAEYVKSTPKLIPFT 290          
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: A0A0P6XDT8_9CHLR (S5A_REDUCTASE domain-containing protein n=1 Tax=Leptolinea tardivitalis TaxID=229920 RepID=A0A0P6XDT8_9CHLR)

HSP 1 Score: 156 bits (395), Expect = 7.450e-42
Identity = 90/255 (35.29%), Postives = 136/255 (53.33%), Query Frame = 1
Query:  325 LLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAGP-PYTFWGICSMLYAFLALPTVYALRR--LPAAEGSYIGVSQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVPGTRQYTWEK 1080
            ++++  +  GFR   +F++ GY FS+      +  L   N   L  L +A ++ +GLRL  F   R+    +Q  R R+ +       P  +  W   S+LY  +  P +++L     PA  G        GL +M  GL++E +AD QKS FK K+P+TFC TGLY   R PNY GE +FW G W+  I  Y   + W+ S+IG + IV I+  +T  LEK Q  +YG+  E+++Y+KS PV +P    YT +K
Sbjct:   14 IITLAVTAVGFRRMVYFLNIGYAFSIVAVIILSVILMWKNATVLILLQSAAIIFWGLRLGIFVTRREMSKGYQKERDRIDKEYTGITLPIKFAIWISVSVLYLMMVSPLLFSLETEYQPAPAGRIF--QFLGLVLMIGGLILEGIADRQKSAFKLKNPNTFCHTGLYSVVRSPNYLGEIIFWVGTWVMGIGFYKTVWEWIISIIGMACIVYIMFGSTKRLEKTQISRYGNLPEFQQYSKSVPVLIPWLPLYTLQK 266          
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: A0A7S0TGM9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TGM9_HEMAN)

HSP 1 Score: 162 bits (410), Expect = 3.940e-41
Identity = 96/255 (37.65%), Postives = 141/255 (55.29%), Query Frame = 1
Query:  295 GGPALFAQGVLLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYIGVSQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVPGT 1059
            G PA FA    +S++ S  GF    +FV YGY  S+    +     F       +  HA G++A+G R+ +F  +R+  +  Q + +     KK       + W   S+ YA L  P ++ L+    A  S   +++ GL V AVGLL+ES +D  KS FK+ SP++F S+GLYRF RHPNYFGE +FW G++ A + +      W  + +G + IV+I+L+AT  LEK+QA KY    E+ EY KSTP  +P T
Sbjct:   37 GLPAAFA----VSLIASAVGFISAVYFVGYGYALSMIALGSVTLQRFMATASQPAVYHAVGVIAWGARILTFLLYREFFAWKQLKERNRETNKKFAFTAKVSTWLFVSIFYALLFSPVLFHLQ----AASSIPVLTKTGLGVAAVGLLIESQSDAAKSSFKQSSPESFMSSGLYRFCRHPNYFGEVIFWGGSYAAGVGSLTSPLAWTSASLGMAGIVAIMLQATESLEKKQALKYAELPEYAEYVKSTPKLIPFT 283          
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: A0A2E9R051_9DELT (S5A_REDUCTASE domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9R051_9DELT)

HSP 1 Score: 154 bits (388), Expect = 1.190e-40
Identity = 92/252 (36.51%), Postives = 132/252 (52.38%), Query Frame = 1
Query:  325 LLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAG--PPYTFWGICSMLYAFLALPTVYALR-RLPAAEGSYIGVSQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVPGTRQYT 1071
            L++++ S  GF    +FVS GY FS+   A      F  +L   S +H   L  YG RL +F   R+    ++   K + Q + +N G       W   SMLY  +  P ++ L  +    + S+  +   GL +   G+L+E++AD QKS FKK  PD FC  GLYR  R PNYFGE +FW G W A IP Y    HWV S+IG   I+ I++ +T  LE +Q E+YG  + +++Y  S PV  P    Y+
Sbjct:   23 LIALVISAGGFYRLVYFVSIGYAFSITGMAIAGGIFFWPSLGVYSLVHMVALGIYGTRLGTFLVARERKPSYKKELKEV-QERAENVGVSKKLLIWLGVSMLYVAMFSPGLFHLTYKRMTKDVSFSLLLVVGLVIAFGGILLEALADHQKSAFKKDQPDRFCDVGLYRHMRCPNYFGEILFWIGNWCAGIPFYTHLLHWVVSLIGLVCIILIMMGSTKRLEHKQDERYGELEAYQQYVSSVPVLFPFVPLYS 273          
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: A0A1Q3YUG8_9HYPH (S5A_REDUCTASE domain-containing protein n=2 Tax=Devosiaceae TaxID=2831106 RepID=A0A1Q3YUG8_9HYPH)

HSP 1 Score: 147 bits (372), Expect = 2.210e-38
Identity = 91/245 (37.14%), Postives = 130/245 (53.06%), Query Frame = 1
Query:  322 VLLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAGP-PYTFWGICSMLYAFLALPTVYALRRLPAAEGSYIGVSQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVP 1053
            +LL +  S  GFR  + F+S GYGF +A QA   A L+R+ L          L AYGLRL  +   R+  S F    +         AGP  +  W   S LY  +A P ++ L +  AA G+ +    AG+A+M  GLL+E++AD QKS FK  +P  F   GLY   R PNYFGE +FW G ++A + AY     W+ + IG   I  I+L +   LE +QAE+YG    +++Y +  P+ +P
Sbjct:   18 LLLCLAISALGFRRVDWFISLGYGFFIAAQALLFALLYREALSFWLVAQLVLLFAYGLRLGGYLIGRERASSFARELEASRARSAGIAGPVKFAIWVSVSALYVAMASPALFGLVQ--AAAGAAVPSLPAGVAIMLAGLLLEALADWQKSRFKAANPRAFMRQGLYAIVRCPNYFGEMLFWLGGFVAGLSAYRSLGAWLIAGIGLVCIELIMLGSARRLELKQAERYGGEPAYRDYVERVPILIP 260          
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: UPI001EE98285 (DUF1295 domain-containing protein n=1 Tax=Rhodopseudomonas sp. HC1 TaxID=2897386 RepID=UPI001EE98285)

HSP 1 Score: 143 bits (361), Expect = 7.940e-37
Identity = 85/259 (32.82%), Postives = 137/259 (52.90%), Query Frame = 1
Query:  307 LFAQGVLLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAG----PPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYIGVSQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVPGTRQYT 1071
            L    +L+S+  S  GFR   +FVS  Y  ++A Q+     +F  ++     L    L+ YG+RL +F   R+    +    K LA  +++ A          W   S+L+  L LP +        AEG +   +  G+ +M  GL++ESVAD QKS +K+ +P  +C  GLYR  R PNYFGE +FW G W+A + AY+    W+ + +G   I+ ++  A  GLE++Q ++YG+  +++EY ++ P+  P T  YT
Sbjct:    7 LVGLALLISLAVSAAGFRRVYYFVSLCYAGAIAAQSLVFMLVFYASIEGWVLLMMLALLVYGVRLGAFLAVRERNPGYA---KELAGAERRTADVLLWQKGAIWLGVSLLFTLLFLPALLVASL--QAEGVWPASAPLGVMLMTAGLVIESVADWQKSRYKQANPTRYCDVGLYRMVRCPNYFGEMLFWFGVWVAGLSAYSTLAAWLLTTLGLLYILGLMTAAAAGLERKQDDRYGTMADYQEYVRTVPILFPITTIYT 260          
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: F2JRK8_CELLD (S5A_REDUCTASE domain-containing protein n=2 Tax=Cellulosilyticum TaxID=698776 RepID=F2JRK8_CELLD)

HSP 1 Score: 142 bits (358), Expect = 2.240e-36
Identity = 87/256 (33.98%), Postives = 128/256 (50.00%), Query Frame = 1
Query:  322 VLLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRD--SLSCFQNRRKRLAQPKKQNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYIGV-SQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVPGTRQYTWEK 1080
            ++++++ S  GF    +F+S GYGFS+A        LF ++L   + +     V YG RL  +   R+  S S     +K +            + W  CS+LYA    P    L+      G    V S  G  +M  G+L+ES+AD+QKS  KKK+P  FC +GLY+  R PNY GE +FWTG ++++I  Y   + W  +  G   IV I+      LE RQ   YG + E+K Y K TP+ +P    Y+ EK
Sbjct:   15 IVIALVVSSVGFYKYVYFISLGYGFSIAAMGIAMPILFFNDLSIGTMVSCMLFVIYGCRLGGYLLVRELKSASYRHTMKKEMKDGSTMKIASKVSIWVSCSLLYALQISPVFLRLQ-----NGVKTDVFSIVGAMIMVCGILLESLADIQKSKAKKKNPSRFCDSGLYKIVRCPNYLGEVLFWTGVFVSSINVYVGVWQWTMASFGYICIVYIMFGGARRLEIRQNRNYGDNPEYKTYVKQTPILLPFIPLYSVEK 265          
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Match: L1JQA9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQA9_GUITC)

HSP 1 Score: 142 bits (358), Expect = 5.150e-36
Identity = 84/260 (32.31%), Postives = 147/260 (56.54%), Query Frame = 1
Query:  295 GGPALFAQGVLLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFR----DNLHTLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYIGVSQAGLAVMAVGLLVESVADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKWYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFVPGTR 1062
            G PALFA  +L+S+L    GF     F S GYG S+A  +  + + F      ++  ++ LHA+ ++A+G+RLA+F  WR+  +  +++ + +   ++       + W   ++  + L  P ++ ++     E     +S  G+ +  VGL VES+AD QKS+ K++ P  FC  GLYRFSRH NY GE +FW+G+++A++ +       + +  G   I+ +++ AT  L+++Q +KY  S E+++Y K TP  +P TR
Sbjct:   43 GIPALFAASLLVSLL----GFYRVTWFFSLGYGLSMAFMSCLSLFFFSVIQGASIPLVAMLHASLVIAWGVRLAAFLAWREFKAWPESKSRYVETNRRTGLSKKISTWVFVAIFDSLLFAPCLFHMKTPSKLEV----LSWFGVVLQFVGLQVESLADQQKSLSKRERPGQFCQEGLYRFSRHVNYLGEILFWSGSYIASLGSLRNPLQLLTASAGFLAILGVMVGATNNLDRKQFDKYNGSPEYQKYIKETPKLIPFTR 294          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11509.1324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZJ2_9PHAE7.830e-25095.05S5A_REDUCTASE domain-containing protein n=2 Tax=Ec... [more]
A0A7S2WAP1_9STRA3.780e-4441.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1H721_HEMAN9.090e-4337.65Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A0P6XDT8_9CHLR7.450e-4235.29S5A_REDUCTASE domain-containing protein n=1 Tax=Le... [more]
A0A7S0TGM9_HEMAN3.940e-4137.65Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A2E9R051_9DELT1.190e-4036.51S5A_REDUCTASE domain-containing protein n=1 Tax=De... [more]
A0A1Q3YUG8_9HYPH2.210e-3837.14S5A_REDUCTASE domain-containing protein n=2 Tax=De... [more]
UPI001EE982857.940e-3732.82DUF1295 domain-containing protein n=1 Tax=Rhodopse... [more]
F2JRK8_CELLD2.240e-3633.98S5A_REDUCTASE domain-containing protein n=2 Tax=Ce... [more]
L1JQA9_GUITC5.150e-3632.31Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11509contigEcto-sp13_S_contig11509:1..5007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score688.3
Seed ortholog evalue1.9e-195
Seed eggNOG ortholog2880.D8LD60
Model size1101
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.oxidoreductase activity, acting on the CH-CH group of donors
EggNOG OGsCOG3752@1,KOG4650@2759
Ec32 ortholog descriptionProtein of unknown function DUF1295
Ec32 orthologEc-11_000580.1
Cds size1101
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11509.1324.1prot_Ecto-sp13_S_contig11509.1324.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11509 1..5007 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462604.2987368-CDS-Ecto-sp13_S_contig11509:0..3181681462604.2987368-CDS-Ecto-sp13_S_contig11509:0..318Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11509 1..318 +
1681462604.311195-CDS-Ecto-sp13_S_contig11509:1091..11841681462604.311195-CDS-Ecto-sp13_S_contig11509:1091..1184Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11509 1092..1184 +
1681462604.3205407-CDS-Ecto-sp13_S_contig11509:1735..18781681462604.3205407-CDS-Ecto-sp13_S_contig11509:1735..1878Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11509 1736..1878 +
1681462604.3337522-CDS-Ecto-sp13_S_contig11509:2814..29411681462604.3337522-CDS-Ecto-sp13_S_contig11509:2814..2941Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11509 2815..2941 +
1681462604.3451798-CDS-Ecto-sp13_S_contig11509:3286..34111681462604.3451798-CDS-Ecto-sp13_S_contig11509:3286..3411Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11509 3287..3411 +
1681462604.3533201-CDS-Ecto-sp13_S_contig11509:4154..42501681462604.3533201-CDS-Ecto-sp13_S_contig11509:4154..4250Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11509 4155..4250 +
1681462604.3630576-CDS-Ecto-sp13_S_contig11509:4808..50071681462604.3630576-CDS-Ecto-sp13_S_contig11509:4808..5007Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11509 4809..5007 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11509.1324.1

>prot_Ecto-sp13_S_contig11509.1324.1 ID=prot_Ecto-sp13_S_contig11509.1324.1|Name=mRNA_Ecto-sp13_S_contig11509.1324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
CTLLAQSEGFFAAPNTPTTHSKLASDLNGRTNGHGQLAARSDSKSRGSSP
ALGAAGSRERLFETVTTLRGGSPAMKIPGYDAAAAAIAAISVPAIAWTGG
PALFAQGVLLSMLTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLH
TLSALHAAGLVAYGLRLASFCGWRDSLSCFQNRRKRLAQPKKQNAGPPYT
FWGICSMLYAFLALPTVYALRRLPAAEGSYIGVSQAGLAVMAVGLLVESV
ADLQKSVFKKKSPDTFCSTGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAK
WYHWVFSVIGPSQIVSIILRATGGLEKRQAEKYGSSKEWKEYAKSTPVFV
PGTRQYTWEKAETKTN*
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mRNA from alignment at Ecto-sp13_S_contig11509:1..5007+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11509.1324.1 ID=mRNA_Ecto-sp13_S_contig11509.1324.1|Name=mRNA_Ecto-sp13_S_contig11509.1324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5007bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11509:1..5007+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGCACTCTCCTGGCCCAATCCGAAGGTTTCTTCGCAGCCCCCAACACACC AACCACCCACAGCAAGCTCGCGTCCGACTTGAACGGGCGCACCAACGGCC ACGGCCAGTTAGCCGCTCGTAGCGACAGTAAGAGCCGTGGATCCTCTCCT GCGCTCGGAGCAGCAGGATCGCGCGAGCGACTTTTCGAGACGGTGACGAC CCTTCGTGGTGGGAGCCCCGCGATGAAAATCCCTGGGTATGATGCCGCTG CCGCCGCGATTGCAGCGATTTCTGTCCCCGCCATCGCATGGACGGGGGGG CCGGCTCTCTTCGCCCAGGTACGAATGCGGTGGAGCTAGGCGGATCTTCT TCTTTGTGTTTCATTCCGAGAGTATACAATTGCCTGGGAATCCCCATCTT CTCCTAATAATACAGTACTATGACGCATTTTTCCGGAGTGAAACCAAGGG TTACTGCTATGTGCACCTTACACGTTGTTGAGATACCACGCCACGAGTGA TCTTGCGGGTTAAATCCTCAAAGCTTCATCGTGGACAACTGTAGTCTTCG GGTGGTTGCAGCTGATTATAAACTCGGAGGAGCTGAGCGTCGTGCAACGT GGACTGGCTGGCAATGACCCATTGCGATTACGTGTAGTCTACGTACTTAC CTACACGACACCTTGGACACGCTGTCGAAAGGCAAGTGTCTCGTAACGGA GCGTATGGCGATCGTGCAATAAATTGCATTCACAGCCTTTTCATCTTCTG TGATCCGCCCTCTCTGCCCATGCTTGTACTGCTGTACATGATGGCATGCT CTTGTGGTGAACCTTAGGTCGCAAGAACGCCACTGACACAGGCGCCTGCA CTTGTCACCAATGAATGAATGGCCCCCGATTGCCGCGGTTCTCATGGTGG CTGTGTGGTGCACCTGCACGCTGCAATTGTGCGCACGTACTGCGCCGGTT CAACAGAACGTGGTTATCCCACCACAGCCAGCGCTTCAGTGGCGGTTACG CCTCCCCACAGTTTTGTACATTCCCTCCCATCTCTCTTCCATCCTTACGA CGACCCCGCCCTTGCGTGCCTCCGTGTGCCTTCTTCGGCAGGGCGTCCTG CTGTCGATGTTGACATCGATCGACGGATTCCGTATCCGGGAGCACTTCGT CAGTTACGGTTACGGCTTCTCCGTTGCCCTCCAGGTGTGTCTCGAAGTTG GCCCTTGTTGCTTTCCGCGCTTGGAGCGTTGCTATTCCTGTCGGAAGGTA GTCAGGTCGGTCTCAGGTCATCACTGGCATCGTTCGGCAAGCCGCTGCTG CAGCTGTCGGGTGGTTCCTGGAGAATGCCGACTACTGTTGTGCTGAGGAG TTTTACCCGCCATAGATCGGGCACCCGGCACAACTCAGAGTATGAGACGG CAGTTGTACTGTTTCGTTTGTGTCACGCGATTCCAACGGCCTTTCTCAAA GCGACCCGCCTCATTTTGTGCGGCCTTGTACGGGGACCAGCATCTCGTCG CCACCACTGTAGCATGGCGGCAGTCCGGCGAAAGACAAGGAACATTTTCT TCTCAAGAGATACTGCTGTAGACATCGCCCATTTAGATACCCCCCCGGCC GCGTTGTGAGCGCAATAGACAGCTCTCGCGTGGTCTCCGGCGAATTCACT GAACTTTTCATCGTTCATGCTACCTCTGTTTCATCATTCATTTCCTTAAC TTGTTTTCCAAATTTCTGGTTCTTTTTTCTCTCAGGCCGCTGGCGCGGCT TGGCTCTTCCGCGACAACTTGCACACGCTCTCCGCGTTGCACGCTGCTGG GTTGGTGGCTTACGGGCTGAGGCTGGCCTCGTTTTGCGGCTGGAGGGACT CTCTCTCGTGCTTCCAGAACCGCAGGAAGTGAGCAGCAGGATCTCCGAAA AATAAGCAGACTGTTGGTACAAAACGGCAGGATATCCGACAAAGCGAGCA CATTGGACGTGCCTTTGTTTGTGTGTGTAACGATCAAGCAAGAATAGCTT CACCTGACCGCCGTCTGTCTAGGTGACATAATATTTGCCCCGAGAGAACA GGAGCAGAAAGAAGTAGCGCCGACGTGCGCTCTTCACCAGCACAGGTCCT CTCTGGTAGTTTCAAAAACACTGCTGGACACGAGAACTCGATCATTTTTT TTTTGGTGTTGAGTGTCGCCTCCTTCGTGCGGGCCGGCCGCCTTCGCGAG AAATTAAGTTTACTGAGAAAATAGAAGAGGGAGGGAGTACACAGTCCTAA CCCCAGCCCTAATCCAACTTCCCCGATGGCATCTTTTATCCAACATGCTG TGCGTATGTGGACGTTGAGCCCCAAATCTCCTAGTCGCGTCCCCCCTTTT GTGTCGGTCTGCGGGCTAGACGACCCTTTTTCGTCGACCACTCTCGAGTT GAAAGCAATGGAGCACAGAGTGGCACCAAAAGGTTGCATCGCATGCGAGC AGAGCGGGAGCGGTGCAGGAGAATTCTCTATATGTTGAGAGTTTGACCCG TGGAGCTAAAAGCCCGTTGATTCGCTTCGTGCTCAGCGGTGAAGGGCAGG GCTACATCCACGCACACACTTCCGGGTTGCCAAGTGGTTCGTGTGAGGGC GTGGGGGTATGTTGCTATGACGGTGTGTTTTTGCATCTTGGGTTGGAACC GTGATCAAGCCAAGATAAAGGACTAATTCTACTAGATGTAATCACGTTTG AAACAGGTGGTCGGTCCTCTAGTTTTGCTTTTCGAAGTAGGCTGCTGTAC CGTTGGCTAACTTGTCTATGCTCTACTTGTGTTGTCGTACTGTTTGTCGT GCTTCTTGTCGTAGGCGGCTAGCCCAGCCCAAGAAGCAAAACGCCGGTCC CCCGTACACTTTCTGGGGCATTTGCTCCATGCTGTACGCGTTTCTTGCCC TGCCGACCGTTTACGCTCTTCGCCGCCTTCCTGCCGCTGAGGTGAGAGAA AGAAATAGATAAGAGAGAAGGAGAGAGGTAGAGAGAGAGGAAGGGTGACA ACAGCAACGGACGCGTTCCATGCATGCCCCATAGCTGCTACACATGGAAA TTGAGCACACCTCTTGGATTGCGCGCGGTTGCAGTGTGAGGAATCTATGG GTGAGCGCAAAGTGATCTGTTTGACTGAAAAAATGTTTATACCTGGTGTA GAGTAACACTTAATTTTTTAGGTCGCGCCAACGAGAGGCGAGCTGTGTTG ATGACTTCACAACATGAGGGGAGGGATTGATCGATTCATTGGCGCTTCCA CCTTGCCGGCTGCCCTGTGCTCTTCTTCTTTCCCAGGGCTCATACATAGG CGTTAGCCAAGCGGGGTTGGCTGTCATGGCCGTCGGACTGCTGGTGGAGT CTGTGGCTGACCTGCAGAAGTCGGTGTTCAAGAAGAAATCCCCGGATACC TTCTGCAGCACGTGAGTACAACAACGAAGGCGATGCTTTCACAGCGTATG GTAAAAGTGGTAGCCCGCAATCTCGTGTACTTGTGTGGAGATCTTCAATC CGAGGATAGACGACAGTTCCAGGCTCGGCTAGCCTTATCGGTGTTGCGTG TTGCTGAGGTGTACGCCACACCTTCGGCGNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCTTTT TCAGCGGCCTCTACCGCTTTTCACGCCACCCCAACTACTTCGGGGAGGCC GTTTTCTGGACCGGGGCCTGGCTGGCCGCGATCCCTGCGTATGCTAAGTG GTGAGTGGTGAGAACATGGATCGCTCTCGAAACGAGTCTCCAGACAGCAT TGGCTACGGTCTGGCGCACAGCTTGATCGCTCTCGAAACGAGACTCCAAG CAGCATCGGCTACGGTCTGTCGCTCCGAACAAGGCAGCTTTCGGGATACT GCAGCAGGGATTGTCTTGTCACAATCCTGGTTGGCACACGGAAAACGTGC GTCTGTGCCATCTAGATTTTTGTGGCGACCGGATGGACGAAGAGCGGCCG CTCGGTAAATCGTGCCATGGACCCGTCATGACAGAGTTCGCGGTTATCTT GTCTTTGTCTTGACATAAATTTCCCAAGCTAGTTTCTTGTTGCTGTGCCA ATACCTCATTGGCCTCAACTGACCCGAACATCACGTGAATTGGACTTCAT TCACTTTTGCGTCTTTCCTTCGAGACGACTTAATGTGCACCTTCTGTTTC CAATGAGTACACCGTCTCTACTTTGCTTCCAAACGTGAAATTATCTGCAG ATCGGTCTTGACCAAAAGATCTGCCCGTCTCTTGCGTCTCTCTCTCTTTC CCGTCTAGGTACCACTGGGTTTTCTCCGTGATAGGCCCCTCCCAGATCGT CTCCATCATCCTACGGGCGACGGGGGGGCTGGAGAAGAGACAGGCGGAGA AGTACGGGTCCTCGAAGGAGTGGAAGGAGTACGCCAAGTCCACCCCCGTC TTCGTGCCCGGGACGCGGCAGTACACCTGGGAAAAAGCTGAAACGAAGAC GAACTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11509:1..5007+

>mRNA_Ecto-sp13_S_contig11509.1324.1 ID=mRNA_Ecto-sp13_S_contig11509.1324.1|Name=mRNA_Ecto-sp13_S_contig11509.1324.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1101bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11509:1..5007+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGCACTCTCCTGGCCCAATCCGAAGGTTTCTTCGCAGCCCCCAACACACC
AACCACCCACAGCAAGCTCGCGTCCGACTTGAACGGGCGCACCAACGGCC
ACGGCCAGTTAGCCGCTCGTAGCGACAGTAAGAGCCGTGGATCCTCTCCT
GCGCTCGGAGCAGCAGGATCGCGCGAGCGACTTTTCGAGACGGTGACGAC
CCTTCGTGGTGGGAGCCCCGCGATGAAAATCCCTGGGTATGATGCCGCTG
CCGCCGCGATTGCAGCGATTTCTGTCCCCGCCATCGCATGGACGGGGGGG
CCGGCTCTCTTCGCCCAGGGCGTCCTGCTGTCGATGTTGACATCGATCGA
CGGATTCCGTATCCGGGAGCACTTCGTCAGTTACGGTTACGGCTTCTCCG
TTGCCCTCCAGGCCGCTGGCGCGGCTTGGCTCTTCCGCGACAACTTGCAC
ACGCTCTCCGCGTTGCACGCTGCTGGGTTGGTGGCTTACGGGCTGAGGCT
GGCCTCGTTTTGCGGCTGGAGGGACTCTCTCTCGTGCTTCCAGAACCGCA
GGAAGCGGCTAGCCCAGCCCAAGAAGCAAAACGCCGGTCCCCCGTACACT
TTCTGGGGCATTTGCTCCATGCTGTACGCGTTTCTTGCCCTGCCGACCGT
TTACGCTCTTCGCCGCCTTCCTGCCGCTGAGGGCTCATACATAGGCGTTA
GCCAAGCGGGGTTGGCTGTCATGGCCGTCGGACTGCTGGTGGAGTCTGTG
GCTGACCTGCAGAAGTCGGTGTTCAAGAAGAAATCCCCGGATACCTTCTG
CAGCACCGGCCTCTACCGCTTTTCACGCCACCCCAACTACTTCGGGGAGG
CCGTTTTCTGGACCGGGGCCTGGCTGGCCGCGATCCCTGCGTATGCTAAG
TGGTACCACTGGGTTTTCTCCGTGATAGGCCCCTCCCAGATCGTCTCCAT
CATCCTACGGGCGACGGGGGGGCTGGAGAAGAGACAGGCGGAGAAGTACG
GGTCCTCGAAGGAGTGGAAGGAGTACGCCAAGTCCACCCCCGTCTTCGTG
CCCGGGACGCGGCAGTACACCTGGGAAAAAGCTGAAACGAAGACGAACTA
A
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