mRNA_Ecto-sp13_S_contig11506.1323.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: A0A6H5KEW6_9PHAE (Isochorismatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEW6_9PHAE) HSP 1 Score: 286 bits (732), Expect = 3.240e-96 Identity = 144/152 (94.74%), Postives = 146/152 (96.05%), Query Frame = 1
Query: 1 RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVVRAVRELTGASAGTTDSSS 456
RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLP+EPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGL+MV AQGGIFGRVASVASVVRAVREL GA AG D SS
Sbjct: 89 RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVMAQGGIFGRVASVASVVRAVRELAGAGAGAADPSS 240
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: UPI001BCC76C6 (cysteine hydrolase n=1 Tax=Roseococcus sp. SDR TaxID=2835532 RepID=UPI001BCC76C6) HSP 1 Score: 197 bits (500), Expect = 3.680e-61 Identity = 98/137 (71.53%), Postives = 111/137 (81.02%), Query Frame = 1
Query: 7 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVVRAVRE 417
KL +SP G RIGD GPMGRILVRGE GHDIIPEL PLP E +DKPGKGAF++TDLE ILR+RGIE L+V GVTTEVCV TTVREANDRGF C V+ +AC+S+FP FH LAM+ AQGGIFG VAS A+ A+RE
Sbjct: 86 KLTRSPPGMRIGDPGPMGRILVRGEAGHDIIPELAPLPGEVVLDKPGKGAFWATDLENILRNRGIEALLVAGVTTEVCVSTTVREANDRGFRCAVISDACASYFPAFHTAALAMIHAQGGIFGWVASSAAATTALRE 222
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: UPI0010C143FB (cysteine hydrolase n=1 Tax=Roseomonas sp. AR75 TaxID=2562311 RepID=UPI0010C143FB) HSP 1 Score: 196 bits (497), Expect = 1.120e-60 Identity = 95/139 (68.35%), Postives = 113/139 (81.29%), Query Frame = 1
Query: 1 RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVVRAVRE 417
R K+ +SP G RIGD GPMGRIL+RGE GH+I+PEL P P EP +DKPGKGAF+ TDLE +LR+RGIETL+V GVTTEVCVHTTVREANDRG C+V+ + C S+FPEFH LAMV AQGGIFG V+ VA++ RA+ E
Sbjct: 83 RAKVHRSPPGLRIGDPGPMGRILIRGEPGHEIVPELAPEPGEPVIDKPGKGAFYQTDLELMLRNRGIETLLVAGVTTEVCVHTTVREANDRGLRCIVLADCCGSYFPEFHEAALAMVAAQGGIFGWVSDVAALRRAMGE 221
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: A0A370L3T7_9HYPH (Cysteine hydrolase n=2 Tax=Bosea caraganae TaxID=2763117 RepID=A0A370L3T7_9HYPH) HSP 1 Score: 194 bits (494), Expect = 1.240e-60 Identity = 93/135 (68.89%), Postives = 110/135 (81.48%), Query Frame = 1
Query: 7 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVVRAV 411
K+ + KRIG GPMGRIL+RGE GHDIIPEL PLP EP +DKPGKGAF+ TDLE +LR+ GIETL+VCGVTTEVCVHTTVREANDRG+ C+V+ +AC S+FPEFH VGL M+ AQGGIFG V+S V+ A+
Sbjct: 61 KVSRGAPDKRIGAEGPMGRILIRGEAGHDIIPELAPLPDEPVIDKPGKGAFYQTDLELMLRNSGIETLLVCGVTTEVCVHTTVREANDRGYRCLVLGDACGSYFPEFHEVGLRMIAAQGGIFGWVSSTDEVLAAL 195
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: A0A1E1UV77_9HYPH (Isochorismatase n=2 Tax=unclassified Bosea TaxID=2653178 RepID=A0A1E1UV77_9HYPH) HSP 1 Score: 194 bits (494), Expect = 3.280e-60 Identity = 91/135 (67.41%), Postives = 114/135 (84.44%), Query Frame = 1
Query: 7 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVVRAV 411
K+++ +RIG GPMGRIL+RGE GHDI+P L PLP EP +DKPGKGAF+ TDL+ +LR+RGIETL+V GVTTEVCVHTTVREANDRG+ C+V+ +AC+S+FPEFHRVGLAM+ AQGGIFG V+S +V+ A+
Sbjct: 87 KVLRGDPARRIGAAGPMGRILIRGEAGHDIVPALAPLPGEPVIDKPGKGAFYQTDLDLMLRNRGIETLLVSGVTTEVCVHTTVREANDRGYRCLVLGDACASYFPEFHRVGLAMIAAQGGIFGWVSSTDAVLAAL 221
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: A0A537R4U0_9PROT (Cysteine hydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R4U0_9PROT) HSP 1 Score: 194 bits (493), Expect = 3.990e-60 Identity = 92/134 (68.66%), Postives = 108/134 (80.60%), Query Frame = 1
Query: 1 RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVV 402
R K+ + RIGD GPMGRIL+RGE GHDIIPELYPL EP +DKPGKG F+ TDL+ +LR+RGIETL+VCGVTTEVCVHTTVREANDRG+ C+VV + C S+FPEFH VGL M+ AQGGIFG VA +V+
Sbjct: 85 RAKVERGAPSLRIGDRGPMGRILIRGEVGHDIIPELYPLAGEPVLDKPGKGGFYQTDLDLMLRNRGIETLLVCGVTTEVCVHTTVREANDRGYRCIVVGDCCGSYFPEFHEVGLRMIAAQGGIFGWVADSGAVI 218
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: UPI00200C42A1 (cysteine hydrolase n=1 Tax=Sediminicoccus rosea TaxID=1225128 RepID=UPI00200C42A1) HSP 1 Score: 194 bits (493), Expect = 4.240e-60 Identity = 95/139 (68.35%), Postives = 111/139 (79.86%), Query Frame = 1
Query: 7 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVVRAVRELT 423
KL +SP G RIGD GPMGRIL+RGE GHDIIPEL P E +DKPGKGAF++TDLE ILR+RGIE L+V GVTTEVCV TTVREANDRGF C V+ +AC+S+FPEFH LAM+ AQGGIFG VA A+ + A++E T
Sbjct: 86 KLTRSPPGMRIGDAGPMGRILIRGEAGHDIIPELAPALGEVVLDKPGKGAFWATDLENILRNRGIEALLVAGVTTEVCVSTTVREANDRGFRCAVISDACASYFPEFHAAALAMIHAQGGIFGWVAPAAAAITALQETT 224
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: UPI0015D51A60 (cysteine hydrolase n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D51A60) HSP 1 Score: 194 bits (493), Expect = 5.110e-60 Identity = 94/135 (69.63%), Postives = 108/135 (80.00%), Query Frame = 1
Query: 7 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVVRAV 411
K+ + RIGD GPMGRIL+RGE GHDIIPEL P EP VDKPGKGAFF+TDL+ ILR+RGI TL+VCGVTTEVCVHTT+REANDRG+ CV V +AC S+FPEFHRVGLAM+ AQGGIFG V A+ A+
Sbjct: 87 KVSRGKPSARIGDPGPMGRILIRGEPGHDIIPELAPAAGEPVVDKPGKGAFFATDLDLILRTRGIATLLVCGVTTEVCVHTTIREANDRGYRCVAVGDACGSYFPEFHRVGLAMISAQGGIFGWVTDSAAAAGAL 221
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: A0A1B3NR74_9HYPH (Isochorismatase family protein n=2 Tax=Bosea sp. RAC05 TaxID=1842539 RepID=A0A1B3NR74_9HYPH) HSP 1 Score: 194 bits (493), Expect = 6.950e-60 Identity = 92/139 (66.19%), Postives = 113/139 (81.29%), Query Frame = 1
Query: 7 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVVRAVRELT 423
K+++ P KRIG GPMGRIL+RGE GH+IIP L PLP EP +DKPGKGAF+ TDLE +LR+RGIETL+V GVTTEVCVHTTVREANDRG+ C+V+ +AC+S+FPEFH VGL M+ AQGGIFG V++ V+ A+ T
Sbjct: 87 KVLRGPADKRIGACGPMGRILIRGEAGHEIIPALAPLPGEPVIDKPGKGAFYQTDLELMLRNRGIETLMVTGVTTEVCVHTTVREANDRGYRCLVLGDACASYFPEFHEVGLRMIAAQGGIFGWVSTTTEVLAALSGAT 225
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Match: A0A4Q3INH2_9HYPH (Cysteine hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A4Q3INH2_9HYPH) HSP 1 Score: 194 bits (494), Expect = 7.060e-60 Identity = 91/135 (67.41%), Postives = 113/135 (83.70%), Query Frame = 1
Query: 7 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLAMVKAQGGIFGRVASVASVVRAV 411
K+ + P KRIG GPMGRIL+RGE GHDI+P L PLP EP +DKPGKGAF+ TDL+ +LR+RGIETL+VCGVTTEVCVHTTVREANDRG+ C+V+ +AC+S+FPEFH VGL M+ AQGGIFG V++ +V+ A+
Sbjct: 112 KVQRGPVEKRIGADGPMGRILIRGEAGHDIVPALAPLPGEPVLDKPGKGAFYQTDLDLMLRNRGIETLLVCGVTTEVCVHTTVREANDRGYRCLVLGDACASYFPEFHEVGLRMIAAQGGIFGWVSTTGAVLAAL 246 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11506.1323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11506.1323.1 >prot_Ecto-sp13_S_contig11506.1323.1 ID=prot_Ecto-sp13_S_contig11506.1323.1|Name=mRNA_Ecto-sp13_S_contig11506.1323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp MQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPIEPCVDKPGKGAFFback to top mRNA from alignment at Ecto-sp13_S_contig11506:3669..5386+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11506.1323.1 ID=mRNA_Ecto-sp13_S_contig11506.1323.1|Name=mRNA_Ecto-sp13_S_contig11506.1323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1718bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11506:3669..5386+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11506:3669..5386+ >mRNA_Ecto-sp13_S_contig11506.1323.1 ID=mRNA_Ecto-sp13_S_contig11506.1323.1|Name=mRNA_Ecto-sp13_S_contig11506.1323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11506:3669..5386+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |