mRNA_Ecto-sp13_S_contig11466.1283.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11466.1283.1
Unique NamemRNA_Ecto-sp13_S_contig11466.1283.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: D7FXK3_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK3_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 2.490e-119
Identity = 185/191 (96.86%), Postives = 188/191 (98.43%), Query Frame = 1
Query:    1 DAMDGRALEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQRRASLKAVKAVDSVVAYCETQGCR 573
            DAMDG ALEHLVGFL+ERRGQSGIVYCHKRDTAEELAKALNRALREESLLDG KAFLAMPYHGKMSDHDRTEAQA+FMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKR+RRASLKAVKAVDSVVAYCE QGCR
Sbjct:  267 DAMDGGALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGGKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRRRRASLKAVKAVDSVVAYCEKQGCR 457          
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: A0A6H5KCP0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP0_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 3.430e-113
Identity = 181/193 (93.78%), Postives = 184/193 (95.34%), Query Frame = 1
Query:    1 DAMDGRALEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQAR--FMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQRRASLKAVKAVDSVVAYCETQGCR 573
            DAMDG ALEHLVGFL+ER GQSGIVYCHKRDTAEELAKALNRALR+ESLLDGRKAFLAMPYHGKMSDHDRTEAQAR  FMSGEVDVI GSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETV LLAFLARKPRPLAG+EKGTE GRKRQRRASLKAVKAVDSVVAYCE  GCR
Sbjct:  105 DAMDGGALEHLVGFLRERSGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQARAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVELLAFLARKPRPLAGEEKGTETGRKRQRRASLKAVKAVDSVVAYCEKLGCR 297          
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: A0A484F682_9EURY (DNA helicase n=1 Tax=Methanimicrococcus blatticola TaxID=91560 RepID=A0A484F682_9EURY)

HSP 1 Score: 136 bits (343), Expect = 8.680e-34
Identity = 70/184 (38.04%), Postives = 103/184 (55.98%), Query Frame = 1
Query:   22 LEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQRRASLKAVKAVDSVVAYCETQGCR 573
            +E L G++K+ R +SGI+YC  RD+ E LA  LN+             F A+PYH  +SD  R   Q +F+  +VD+I  +VAFGMG+DK DVRFV+H+DLPK++E  YQE GR GRDG +   +++ SR     + FL  K               K  ++    A + +  +++YCE+  CR
Sbjct:  219 MEQLEGYIKKNRNKSGIIYCQSRDSVERLATRLNKL-----------GFSALPYHAGLSDDKRARHQDKFIRDDVDIIVATVAFGMGIDKPDVRFVIHYDLPKNLESYYQETGRGGRDGLECECILFFSRGDWHKIRFLIEK---------------KPSKKERDLAFQQLSQIISYCESTDCR 376          
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: UPI001A979D67 (DNA helicase RecQ n=1 Tax=Pedobacter sp. SYSU D00535 TaxID=2810308 RepID=UPI001A979D67)

HSP 1 Score: 135 bits (341), Expect = 1.400e-33
Identity = 78/184 (42.39%), Postives = 109/184 (59.24%), Query Frame = 1
Query:   22 LEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQRRASLKAVKAVDSVVAYCETQGCR 573
            L+ +V F+K  +G+SGIVYC  R   EE+A+ALN        L+G KA   +PYH  +    R E Q +F+  EVDVI  ++AFGMG+DK DVR+V+H D+PKSMEG YQE GRAGRDG + V V ++S + +  LA    K +P++ +E GT+                +  V+ Y E+  CR
Sbjct:  222 LKEIVRFIKGYQGKSGIVYCLSRKKVEEVAEALN--------LNGIKA---LPYHAGLEAKVRAETQDKFLMEEVDVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAGRDGGEGVCVAFYSEKDIEKLAKFM-KDKPVSEREIGTQ---------------ILKEVIDYVESSVCR 378          
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: A0A494VYP5_9SPHI (DNA helicase n=67 Tax=Bacteria TaxID=2 RepID=A0A494VYP5_9SPHI)

HSP 1 Score: 135 bits (340), Expect = 1.920e-33
Identity = 74/184 (40.22%), Postives = 110/184 (59.78%), Query Frame = 1
Query:   22 LEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQRRASLKAVKAVDSVVAYCETQGCR 573
            ++ +V F+++ +G+SGIVYC  R   EE+A+ALN        L+G KA   +PYH  +    R + Q +F+  +VDVI  ++AFGMG+DK DVR+V+H D+PKSMEG YQE GRAGRDG + V V ++S + +  L     K +P++ +E GT+                +  V+ YCE+  CR
Sbjct:  222 IKEIVKFVRQNQGKSGIVYCLSRKKVEEVAEALN--------LNGVKA---LPYHAGLDAKVRADTQDKFLMEDVDVIVATIAFGMGIDKPDVRYVIHHDVPKSMEGYYQETGRAGRDGGEGVCVAFYSEKDIDKLQKFM-KDKPVSEREIGTQ---------------ILKEVIDYCESSVCR 378          
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: A0A4Q3FBS8_9SPHI (ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q3FBS8_9SPHI)

HSP 1 Score: 130 bits (327), Expect = 4.210e-33
Identity = 70/184 (38.04%), Postives = 109/184 (59.24%), Query Frame = 1
Query:   22 LEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQRRASLKAVKAVDSVVAYCETQGCR 573
            ++ ++ ++K+  G+SGI+YC  R   EE+A+ LN        L+G KA   +PYH  +    R + Q +F+  +V+VI  ++AFGMG+DK DVRFV+H D+PKSMEG YQE GRAGRDG + V + +++++ V  LA    K +P++ +E GT+                +  V+ Y E+  CR
Sbjct:  145 IKEIIRYIKQNTGKSGIIYCLSRKKVEEVAETLN--------LNGIKA---LPYHAGLEPKVRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAGRDGGEGVCIAFYAQKDVDKLAKFM-KDKPVSEREIGTQ---------------ILKEVIDYAESAVCR 301          
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: A0A662RIW7_9EURY (DNA helicase n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A662RIW7_9EURY)

HSP 1 Score: 134 bits (338), Expect = 4.310e-33
Identity = 71/185 (38.38%), Postives = 109/185 (58.92%), Query Frame = 1
Query:   19 ALEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQRRASLKAVKAVDSVVAYCETQGCR 573
            A + L+ +LK R+  SGI+YCH R +A++LA  L +           + + A+PYH  +    RTE Q +F+  +V++I  +VAFGMG+DKS+VRFV+H+DLPK++E  YQE GRAGRDG ++  +++ SR  +G L++       +  KE  TE            A K +  +V +CE+  CR
Sbjct:  242 AYDQLLQYLKGRKNDSGIIYCHSRKSADDLANKLKK-----------EGYRALPYHAGLKADLRTETQDKFIKDDVEIIVATVAFGMGIDKSNVRFVIHYDLPKNLETYYQETGRAGRDGEESDCIIFFSRSDMGKLSYF------IDQKEDETE---------KQNAYKKLRCMVDFCESGTCR 400          
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: A0A519XAF0_9SPHI (ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A519XAF0_9SPHI)

HSP 1 Score: 130 bits (327), Expect = 4.960e-33
Identity = 66/154 (42.86%), Postives = 101/154 (65.58%), Query Frame = 1
Query:   22 LEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTE 483
            ++ ++ ++K+  G+SGI+YC  R   EE+A+ LN        L+G KA   +PYH  +    R + Q +F+  +V+VI  ++AFGMG+DK DVRFV+H D+PKSMEG YQE GRAGRDG + V V +++++ V  LA    K +P++ +E GT+
Sbjct:  222 IKEIIRYIKQNTGKSGIIYCLSRKKVEEVAETLN--------LNGIKA---LPYHAGLEPKVRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAGRDGGEGVCVAFYAQKDVDKLAKFM-KDKPVSEREIGTQ 363          
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: A0A519ZGL4_9SPHI (DNA helicase (Fragment) n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A519ZGL4_9SPHI)

HSP 1 Score: 133 bits (334), Expect = 5.510e-33
Identity = 68/153 (44.44%), Postives = 101/153 (66.01%), Query Frame = 1
Query:   25 EHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTE 483
            + ++ F+K+  G+SGIVYC  R   EE+A++LN        L+G KA   +PYH  +    R + Q +F+  +VDVI  ++AFGMG+DK DVRFV+H D+PKSMEG YQE GRAGRDG + + + +++++ V  LA    K +P+A +E GT+
Sbjct:   50 KEIIKFVKQHAGKSGIVYCLSRKKVEEVAESLN--------LNGIKA---LPYHAGLEPKVRADTQDKFLMEDVDVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAGRDGGEGICIAFYAQKDVDKLAKFM-KDKPVAEREIGTQ 190          
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Match: A0A3E2NYD8_9SPHI (DNA helicase n=5 Tax=Mucilaginibacter TaxID=423349 RepID=A0A3E2NYD8_9SPHI)

HSP 1 Score: 134 bits (336), Expect = 6.700e-33
Identity = 74/185 (40.00%), Postives = 109/185 (58.92%), Query Frame = 1
Query:   19 ALEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGRKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQRRASLKAVKAVDSVVAYCETQGCR 573
            A++ +V F+K+ +G+SGI+YC  R   EE+A+ALN        L+G     A+PYH  +    R + Q +F+  +V+VI  ++AFGMG+DK DVR+VVH D+PKSMEG YQE GRAGRDG + V V ++S + +  L     K +P+A +E GT+                +  V+ Y E+  CR
Sbjct:  221 AIKEIVKFVKQNQGKSGIIYCLSRKKVEEVAEALN--------LNG---VRALPYHAGLDPKVRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRYVVHHDMPKSMEGYYQETGRAGRDGGEGVCVAFYSAKDIDKLQKFM-KDKPVAEREIGTQ---------------ILKEVIDYAESSVCR 378          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11466.1283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXK3_ECTSI2.490e-11996.86ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6H5KCP0_9PHAE3.430e-11393.78ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A484F682_9EURY8.680e-3438.04DNA helicase n=1 Tax=Methanimicrococcus blatticola... [more]
UPI001A979D671.400e-3342.39DNA helicase RecQ n=1 Tax=Pedobacter sp. SYSU D005... [more]
A0A494VYP5_9SPHI1.920e-3340.22DNA helicase n=67 Tax=Bacteria TaxID=2 RepID=A0A49... [more]
A0A4Q3FBS8_9SPHI4.210e-3338.04ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax... [more]
A0A662RIW7_9EURY4.310e-3338.38DNA helicase n=1 Tax=Methanosarcinales archaeon Ta... [more]
A0A519XAF0_9SPHI4.960e-3342.86ATP-dependent DNA helicase RecQ (Fragment) n=1 Tax... [more]
A0A519ZGL4_9SPHI5.510e-3344.44DNA helicase (Fragment) n=1 Tax=Pedobacter sp. Tax... [more]
A0A3E2NYD8_9SPHI6.700e-3340.00DNA helicase n=5 Tax=Mucilaginibacter TaxID=423349... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11466contigEcto-sp13_S_contig11466:1..3929 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score362.1
Seed ortholog evalue1.6e-97
Seed eggNOG ortholog2880.D7FXK3
Model size573
KEGG koko:K10901
KEGG Pathwayko03440,ko03460,map03440,map03460
KEGG ModuleM00295,M00414
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.four-way junction helicase activity
EggNOG OGsCOG0514@1,KOG0351@2759
EC3.6.4.12
Cds size567
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11466.1283.1prot_Ecto-sp13_S_contig11466.1283.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11466 1..3923 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462600.9117432-CDS-Ecto-sp13_S_contig11466:0..1101681462600.9117432-CDS-Ecto-sp13_S_contig11466:0..110Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11466 1..110 -
1681462600.9384778-CDS-Ecto-sp13_S_contig11466:1486..16471681462600.9384778-CDS-Ecto-sp13_S_contig11466:1486..1647Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11466 1487..1647 -
1681462600.949379-CDS-Ecto-sp13_S_contig11466:2070..21441681462600.949379-CDS-Ecto-sp13_S_contig11466:2070..2144Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11466 2071..2144 -
1681462600.9699028-CDS-Ecto-sp13_S_contig11466:2913..30541681462600.9699028-CDS-Ecto-sp13_S_contig11466:2913..3054Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11466 2914..3054 -
1681462600.986259-CDS-Ecto-sp13_S_contig11466:3842..39231681462600.986259-CDS-Ecto-sp13_S_contig11466:3842..3923Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11466 3843..3923 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462600.9997563-UTR-Ecto-sp13_S_contig11466:3923..39291681462600.9997563-UTR-Ecto-sp13_S_contig11466:3923..3929Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11466 3924..3929 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11466.1283.1

>prot_Ecto-sp13_S_contig11466.1283.1 ID=prot_Ecto-sp13_S_contig11466.1283.1|Name=mRNA_Ecto-sp13_S_contig11466.1283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp
MDGRALEHLVGFLKERRGQSGIVYCHKRDTAEELAKALNRALREESLLDG
RKAFLAMPYHGKMSDHDRTEAQARFMSGEVDVIAGSVAFGMGVDKSDVRF
VVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRP
LAGKEKGTEAGRKRQRRASLKAVKAVDSVVAYCETQGCR
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mRNA from alignment at Ecto-sp13_S_contig11466:1..3929-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11466.1283.1 ID=mRNA_Ecto-sp13_S_contig11466.1283.1|Name=mRNA_Ecto-sp13_S_contig11466.1283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3929bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11466:1..3929- (Ectocarpus species13 EcNAP12_S_4_19m)
GACGCCATGGACGGACGCGCGCTCGAGCACCTGGTTGGCTTCCTGAAGGA GAGGCGTGGTCAGTCGGGGATCGTGTACTGCCACAAGGTGCCGTGTGTTT GTTATTTAGTTGACCGCCCGCTCGCCTACACATACTGGAATGTGTATCAA ACGTGTCACCACGAAGAATGGGGGGACTGTCGCCATGATAAATAGGACGA AAGCAACAACAATAATCCTCTTGTCCTGGTTTTGGTAACCCCACTCCTCG TGAGTTCGTTCTCTTTGCAGAGGGCCTCATCGAGCGTCACGAAGTGGATT GACTGCCCCAGTGCCGGGTCTCAATAGTATTCGCCGAACAACTCGTTCCC AAGTGGTGGGGTCCCTGGATCCTCGATTTTGCGAGAATGAAATGCAGTGA AATCACGATAAGCTGAGAATTCTCAGCAGTGAGTAAGGCTGGGCTGCGAC CACACTAATGGGGGCAAAGTGTGAAATACGGGAAGTCCACACTCCGTATA TTTTCCTCCTTTTTTTATCATGTTGTCTCAAACCGTTCTTGGGTGCTGAC CCACATGCATGTGGGAGGAGTCATGTGTTGGTAAACATGCACGGCACAGG GACAATTGTCGGTGGTGATCCTGCCGTTAGTAGTTCGTGGTGTTTGCTAC TGGTGTTGGTGACGTTCTCGTACTCCGTGTCAATGTCACTCCTGCTTGTA CTGCTGCTGCTTGCCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTATTTCTGGTCCTGCTGCTGCCGGCAAGTCGTCACATGGTAGTGATTG ACGTGGTGCTCCCGCCGTATCGTCGCCATTTCCGCCATCGTTCCCGTCGT CGCCGTCATCCCAACTCCTGGACAGAGGGACACCGCAGAGGAACTGGCGA AGGCTCTCAACCGAGCACTGAGAGAGGAGTCTCTCCTGGACGGCAGGAAG GCGTTCTTGGCGATGCCCTACCACGGGAAGATGTCCGACCACGACAGGAC CGAAGCCCAGGCACGTGTTCTTTTTTATCGTGGCGTACACCCGCACACCT GTTCAATGTCCTCCTTGTAGCGAGAGATTTTGCATTCATTCTTCCGTCTG ACATGGGGTCGTCCGTTCTTTCCCGCATACACCTGGTTTGTTGTGGTGTC CGCATCAGTTTTTTATGTTGTCTTGGGGCCTTCCATTGTCTTTTTCTGTT CTCTCTGGCTTTGGGTTCGTGTTGACTGGATGGAAATTGCGGTACTTTTG TTTGCTTTCTCTCGTTCAGTGTCGAGATGGACGTGTCGTTCGTTACTCAC CTACGACCGATCGATCGGTCGCCATCGGAGGCTTCGCCATCGTCCATCTG ACGGCAATTTGCCGGGGGTCGGACAAGGCTTTTCTGTATTTTTTTTGCAA TGATGTAGCCGGGGGGTGGGAGCGCGGAGGTGGAACATCCGCCCCGCCGA GCTATTAGGTACTCTTGCCGATGCTACTGTAGGAGCGCTTGCTTGAATCT GGTTTCACATCACGTACCATGCTGGGTACGGCGGCTCACGGACATCTATG AATCGGGCCTCCATGGCCACGACAGTCCGCACCCTGTGAACGTGACCTAC TTTCCCGTCTGATTTGCACAATGGGTCCTTACGCATGCCTATTGTGTTTT CATTTCCACGTCTATCTCGACGGCAAGTGATTGCCTTCTCCTCAAGCTGT CTTCCTCTTCTCTACGGTATATCTCTTTTCGTTTCATTCTCTCAACTCGC CCGTTTTTTTGTTTCACTTTGAATTCCAGGCGAAGTTTATGTCGGGAGAG GTGGACGTGATCGCAGGCAGCGTGGCGTTTGGCATGGGCGTCGACAAGAG CGACGTTAGGTGATCAGGAAATCAAAGAATGGAAGGAAAGACCCCAATTG TCGAAGACTATCATCATATCGACTCTTTGCCGAAAACCTACCTCACTCTT GGTTTTCTGCTTGGTCTGTGGAGCTTTTTCGAGGTCTATCGGAATGAATT GTATCAAACTCAGTTTTCATTCTTTTTGTGGGGGATCTACATCCATGTCT GACCGTGCGGGGATTTTGTGTCTTTCTCCACGTGTCTGTCGCCTTTCCAC GTCGAGAAAGACTTCCGCAAGATCTGCAACGGTTGTGTGTCGTATGTTTG CCGTTTCAAACCGAGATGCGGAACACGCTGCGAAGATTTTGAGCGCTTTG GTCACGTCTTATTGCTGTCGTTGCTGGCTGCTGTTGGTTGTGGTACCTTG ATCTCTGTGCTATTCTACGCCTGCTACTGTAGGTTCGTCGTGCACTGGGA CCTGCCGAAAAGCATGGAGGGCTTGTACCAGGAGCTAGGGAGGGCAGGGC GAGACGGATCGAAGGCAGTCAGCGTGGTCTACCACAGCCGAGAGACGGTC GGGCTCCTGGCCTTCTTGGCTAGGAAACCCCGTCCACTCGCAGGTTCGTT TGTTTGTTGTTGTTGCTGCTATTGTTGCCTTCTTGGCTAGGAAACCCCGT CCACTGGCAGGTTCGTTTTTTTGTTGTTGTTTCTGTCATTGTGGTTGTGG TTGTTGTTGTTGTTGAAGAAATTCTCGGGTGGGCGGTCTTCCATGTCATT ATTTCAATATAACCAAACACCGTTTTTGCTGTCTTCGTTCATAGCTTCAC AATGATTTTCATTCCTGTGGTATACATAGCAAACTGTTGTCCTAATTCTT TCATTAGACCAACGATTCGTTGTCATTTGCTCAATGGAGCAAACGAATGT TGCTCTTGCTGTGTTCATTCTTTCACTAGAGCCAAACGTCATTTTTCTGT TTGACGCGCATTCCTTCGATGAAACGAAGACAGCACGCATTCCTTCGATG AAACTAAGACAACATGCTATTTTTCGTGTTTCGTACTTAGTAGTCCACTA GAGCACAACACCATCTAATCTTGTGTTTGTTCTTCCATAAAATACAGCAA AACGATTTTGTATCTTGTTGTGTTCATCATTTCCCTCTTTTGCTATGAAG AGCAATCCAGCATTCTTAATTTTTGTGTTTCTTCGTTCAAAAGAGCAATC AACTCGTTTTCTGAACGAAATTTTGTATGGGTTTGTCCATTTTTCACTAT CAGGGCAACGCGACTCGATTTTATTTGTTGTGCTTATTCTGTCACTAAAG CGAACCAACATTTTCATTTCCGTGTTTCATCTTCACGAGAGCAGCAAAAC AAACTTCTTGTTGTGCTTTGTCTTGAGTACTGCCGAACAATTTTTCTTGT TGTGTTAATTCTTGCAGTAGAGCAACCCAAATTCTGTCACCATCTTGTTC ATTGTTCCACTCCACGCAGATCCTGCAAAAGTTCCACGGCGGGTTTCATT CTTTCAATAAACAACGCTGATTTTTTTGCAACATATTTTTTCTTTTGTGC ATATTTTCAGTAGACGACATTGGCGTTTTCACGGTTGTATCCGTTCGTTT ACTGGAACAAAACGACGCTATTAATTTGTGTGTCTATTTTGGTTGAGATT GGGACGGAAACGGGCCGGAAAGCGAAATACTTCGAATGCATCATTTTTCA TTGCTGTGCACCTTCTTTCACGAGGGCAAGAAACAAAATTCCTTTTGTCG AGCTTAGTCTTCTAGAAGGGCAAAACAGCGTTTGCTGGTTTGTTCATTGC AAGCAGAGCCAACTATATTTTCCACTGGGGTGTTCATTCGTTGAATAGAA CAACGCTGTGCTTTTTGTCCGTTTTCTTATTCGACCTAAAAAGTGCAATC TCTTCTTGTGTTCAAATTTGTTCACTACAATAGAGCAAATCGTCATTTCC GATGTTGTGTTCGTTGTAGGTAAGGAGAAAGGGACGGAAGCGGGCCGGAA GCGACAGCGGCGAGCGTCCTTGAAGGCCGTCAAGGCTGTTGATTCAGTGG TGGCCTACTGCGAGACGCAGGGCTGCCGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11466:1..3929-

>mRNA_Ecto-sp13_S_contig11466.1283.1 ID=mRNA_Ecto-sp13_S_contig11466.1283.1|Name=mRNA_Ecto-sp13_S_contig11466.1283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=567bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11466:1..3929- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGACGGACGCGCGCTCGAGCACCTGGTTGGCTTCCTGAAGGAGAGGCG
TGGTCAGTCGGGGATCGTGTACTGCCACAAGAGGGACACCGCAGAGGAAC
TGGCGAAGGCTCTCAACCGAGCACTGAGAGAGGAGTCTCTCCTGGACGGC
AGGAAGGCGTTCTTGGCGATGCCCTACCACGGGAAGATGTCCGACCACGA
CAGGACCGAAGCCCAGGCACGTTTTATGTCGGGAGAGGTGGACGTGATCG
CAGGCAGCGTGGCGTTTGGCATGGGCGTCGACAAGAGCGACGTTAGGTTC
GTCGTGCACTGGGACCTGCCGAAAAGCATGGAGGGCTTGTACCAGGAGCT
AGGGAGGGCAGGGCGAGACGGATCGAAGGCAGTCAGCGTGGTCTACCACA
GCCGAGAGACGGTCGGGCTCCTGGCCTTCTTGGCTAGGAAACCCCGTCCA
CTCGCAGGTAAGGAGAAAGGGACGGAAGCGGGCCGGAAGCGACAGCGGCG
AGCGTCCTTGAAGGCCGTCAAGGCTGTTGATTCAGTGGTGGCCTACTGCG
AGACGCAGGGCTGCCGG
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