mRNA_Ecto-sp13_S_contig1146.1280.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: D7FUN3_ECTSI (Arsenite translocating ATPase like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN3_ECTSI) HSP 1 Score: 813 bits (2100), Expect = 8.100e-294 Identity = 446/497 (89.74%), Postives = 458/497 (92.15%), Query Frame = 2
Query: 173 MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSASNRRALLPAAAAYRRLTAASQHQHQQLQRRCPTSTRLLAGSASSALTPTAPQTGLRKARSSRIDGLRSLKSVAAPAGLEKGVSAGGLGELLEARNGVSERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDVSGMAEEMGVPKDMVESFGLSEFSEVLTNPPPGIDELVALSRVLKLARSEDSPF--------------------------YKQVIQLRGRMGGILNLLTGMFGGGNNVVKKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPEYVARLHKGQSACISRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRFLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 1585
MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSASNRRALLPAAAAYRRLT+ASQHQ Q+ QRRCPTSTRLLAGSASSALTPTAPQ GLRKARSSR G+RSLKSVAAPAGLEKGVSA GLGELLEARNGV+ERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQD+SGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFD+SGMAEEMGVPKDMVES GLSEFSEVL NPPPGIDELVALSRVLKLARSE+ F ++VIQLRGRMGGILNLLTGMFGGG NVV+KADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQG+AVRNIVVNQIVSPDSGPEYVARLHKGQSACI RLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLR+LGTAAYGGGNEGNWKQLSSDAEQRFIILGGK
Sbjct: 1 MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSASNRRALLPAAAAYRRLTSASQHQ-QRPQRRCPTSTRLLAGSASSALTPTAPQAGLRKARSSRSGGVRSLKSVAAPAGLEKGVSARGLGELLEARNGVNERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDVSGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDISGMAEEMGVPKDMVESLGLSEFSEVLANPPPGIDELVALSRVLKLARSEEQKFDRIIIDTAPTGHTLRLLGFPDFLENFLEKVIQLRGRMGGILNLLTGMFGGGTNVVEKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGVAVRNIVVNQIVSPDSGPEYVARLHKGQSACIGRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRYLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 496
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: A0A7S0NW41_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NW41_9EUKA) HSP 1 Score: 275 bits (702), Expect = 1.730e-81 Identity = 155/376 (41.22%), Postives = 233/376 (61.97%), Query Frame = 2
Query: 563 LGELLEARNGVSERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDVSGMAEEMG-VPKDMVESFGLSEFSEVLTNPPPGIDELVALSRVLKLARSEDSP----------------------------------FYKQVIQLRGRMGGILNLLTGMFGGGNNVVKKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPEYVARLHKGQSACISRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRFLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 1585
L +LLE R+ +R +F GGKGGVGKTST++A+A++CAD GL TL++STDPAHSL DAL QD+SGG PV ++G LSAMEV+T +AV+ F EA+ F + + +G V ++ + GL EF+++L N PPG+DEL+AL+ VL R ++ +++ L+GR+ G L LL G+ G G N +K ++AVE+LQ ++ER+ L+ L K++D T+F +V+IP++LA+AES RLL +L Q I VR++VVNQ+++ + P Y+ R+ + Q+ +S + AG + L S VP+FDME+ G+Y L+FLG A+ G N W L + E+RF+++GGK
Sbjct: 39 LAQLLE-RDSTQQRLIFVGGKGGVGKTSTSSAIALRCADKGLSTLIVSTDPAHSLSDALVQDVSGGSPVLVMGCMGLSAMEVETDKAVERFREAVGGFRAADLG--LGSVAEEAIGKLGLDEFADILDNTPPGLDELLALTEVLSFVRPPEADGGEMEAATFDRVIFDTAPTGHTLRLLAFPDFIQKLLSKLVALKGRLLGALGLLQGVLGAGVNPAQKLELAVERLQRWRERVERLQALLKDEDVTDFIVVSIPSRLAVAESARLLSSLVEQDIPVRHLVVNQLLTERAPPGYLQRVREEQARALSSVD------AGASPLSTLSTSRVPFFDMEMRGIYALQFLGKMAFDGVNAAAWSNLLNAREERFVLVGGK 405
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: A0A4D9DG36_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DG36_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.580e-69 Identity = 148/364 (40.66%), Postives = 219/364 (60.16%), Query Frame = 2
Query: 584 RNGVSERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDVSGMAEEMGVPKDMVESF---------------------GLSEFSEVLTNPPPGIDELVALSRVLKLARSED--SPFYKQVIQLRGRMGGILNLLTGMFGGGN----NVVKKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPEYVARLHKGQSACISRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRFLGTAAYG---GGNEGNWKQLSSDAEQRFIILGGK 1585
+ G+++RF+FFGGKGGVGKTST+ A+A+ AD GL+TL+ISTDPAHSLGD L+Q +SGG+PVR+ G DNL AMEVDT A+ F DVS +A + GV ++++ GL+ V+ P G L+L D F ++++L+ R+ +L+ L+ +FGGG+ ++ D + K++ K +M+ELR+LF++QDATEFCIVTI TQLA+AESKRLL AL + IAVR++VVN++V + +++AR+ +GQ+ C+ R+++ G AD L VPY D+EV GV+ L+F+ AA+ G G+ + RF++ GGK
Sbjct: 101 KTGLTQRFIFFGGKGGVGKTSTSTAIAVHLADKGLKTLIISTDPAHSLGDLLEQKVSGGDPVRVEGCDNLWAMEVDTTRALDRFRALFKELDVSALAAQFGVSEEILAGLADVVRLSKGKGSTSKEGAAVNGLTFDRVVIDTAPTG--------HTLRLLSFPDFLDGFLGKLVKLQLRLSKVLSSLSSLFGGGSVESQERLRATDELLAKVERAKLQMVELRELFRDQDATEFCIVTIATQLAVAESKRLLAALRKEKIAVRHLVVNKLVQDEDQSQHMARIGRGQALCLQRVER------GLVADHGLSTVQVPYLDVEVKGVFGLKFMADAAFETSPGSVFGDLFESGGPIATRFVLFGGK 450
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: A0A0G4FEQ3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FEQ3_VITBC) HSP 1 Score: 244 bits (623), Expect = 2.680e-68 Identity = 156/397 (39.29%), Postives = 226/397 (56.93%), Query Frame = 2
Query: 563 LGELLEARNG-VSERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISG--GEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDVSGMAEEMGVPKDMVESFGLSEFSEVLTNPPPGIDELVALSRVLKLAR------SEDSPFYKQVIQ----------------LRGRMGGILNL--------------LTGMFGG--GNNVVKKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPE---------------YVARLHKGQSACISRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRFLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 1585
L +LL+A G S R + FGGKGGVGKT+TAAA A++ AD GLRTL+ISTDPAHSLGDAL Q + E + G+DNL A+EVD +AV E + AL +FD ++ ++G+ ++E G+ + ++ NPPPGIDELVA+++VL+L R S S F + VI L G +G ++ L L + GG G + D A+++++ K+R++ LR L +N + TEFC+VTIPT++AIAESKRLL +L +GIAV++++VN++++ S + +V +L Q + RL LA + L +S VPYFD+EV G LR+ G A+G N W L D ++R II+GGK
Sbjct: 62 LNDLLQAPGGSTSTRLILFGGKGGVGKTTTAAATAVRFADEGLRTLIISTDPAHSLGDALGQQLHAPPDEMTAVEGVDNLWALEVDAGQAVIEMKAALETFDAIELSRKLGIGTTVLEGIGIGDMVKLFENPPPGIDELVAIAKVLQLTRGKGGGSSGGSRFDRLVIDTAPTGHTLRLLAAPQFLDGFLGKVIKLKNQLDALTRSLKKMLASVSGGTEGAEPLLDQDAALQRIEALKDRLLGLRGLLRNSETTEFCVVTIPTEMAIAESKRLLASLKKEGIAVKHLIVNKLMTAGSAEQVGEIQETRRVATLASFVEQLQSDQVKSLQRLHTLAQ-------EANLRLSFVPYFDVEVTGPLGLRYFGEEAFGRANAPMWSDLFEDPKRRCIIMGGK 451
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: A0A8J6C886_DIALT (Uncharacterized protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C886_DIALT) HSP 1 Score: 236 bits (601), Expect = 5.680e-65 Identity = 158/449 (35.19%), Postives = 235/449 (52.34%), Query Frame = 2
Query: 563 LGELLEARNGVSERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDVSGMAEEMGVPKDMVESFGLSEFSEVLTNPPPGIDELVALSRVLKLAR----------------SED-------------------------------------SPFYKQVI---------------------------QLRGRMGGILNLLTGMFGGGNNVVKKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPEYVARLHKGQSACISRLQKLA---DGAAGGAADGALD-------ISPVPYFDMEVAGVYPLRFLGTAAYGGGNEGNWKQLSSD------------------AEQRFIILGGK 1585
L ++L+ +G ++RFV GGKGGVGKTSTA+A+AI+CA +GLRTLV STDPAHSLGDAL D++GG+PV + GLD L A+E+D EA+ F AL++F + + G+ ++++ GL EF+++L PPPG+DEL+AL+ V++L R ++D S Y +VI LR R+GG+L+ + G+ + + A +++ + R+ LR L + D EFC+VT+PT++A+AE+ RL+ L Q ++VR++VVNQ+V S P Y++RL KGQ + RL A + AAGGA GA +SPV Y+D+E+ GVYPLRFL A+ G W +++ AE RF+++GGK
Sbjct: 57 LADVLDT-SGAAQRFVLVGGKGGVGKTSTASALAIRCAQSGLRTLVASTDPAHSLGDALQLDLAGGKPVAVPGLDGLDALEIDPSEAIGRFRAALAAFRPADLGLG-GLAEELLSQLGLDEFADILDEPPPGLDELLALAEVIELTRGGPATGRGEAHASAAAAQDELDDFDARLAARSGXXXXXXXXXXXXXXXXXXXXXXXSISYARVILDTAPTGHTLRLLSLPQFIDSLLGKLVALRARLGGVLSAAAALGLVGSGIDARLSEATARVEDVRMRVQALRALLVDADRAEFCVVTVPTEVAMAETARLVGTLREQRVSVRHLVVNQLVEQTSAPAYLSRLRKGQDSIARRLLGRASATEAAAGGAQPGAAGSEWAGVCVSPVRYYDVELRGVYPLRFLADKAFSGAE---WAPITAADAGAADAAGAGAGGLAPRAECRFVVMGGK 500
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: A0A7S3Z2P8_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z2P8_9EUKA) HSP 1 Score: 236 bits (603), Expect = 6.090e-65 Identity = 148/381 (38.85%), Postives = 213/381 (55.91%), Query Frame = 2
Query: 554 AGGLGELLEARNGVSE----RFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPV---RIIGLDNLSAMEVDTVEAVKEFEEALSSFDVSGMAEEMGVPKDMVESFG----LSEFSEVLTNPPPGIDELVALSRVLKLARSED----------------------------------SPFYKQVIQLRGRMGGILNLLTGMFGGGNNVVKKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPEYVARLHKGQSACISRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRFLGTAAYGGGNEGNWKQLSSDAEQ 1561
A GL EL G S R++F GGKGGVGKT+TA+A+ ++ A+ G TLV+STDPAHSLGDALD+D+SGG V ++GL L AMEVD+ + + F EA+S D+ G+A E G+ + +E+F L + S + NPPPGIDE+VA+++VLKL +S F + I+LR R+G +L L+ G N K + V KL+ ++ M +L+ L N ATEF +VTIPT +A+ ES+RLL++L+ IA ++IVVN+I+SP Y+ + + Q C+ RLQ L ++I+ VPYFD EV G+ L +GT A+ GN NW+ ++ Q
Sbjct: 120 AQGLSELFVDDRGSSSAGKSRYIFCGGKGGVGKTTTASAIGVKLAEQGHTTLVVSTDPAHSLGDALDEDLSGGGIVDVGSVMGLP-LYAMEVDSKQTLDRFSEAVSGLDLVGLAVEAGISVETLETFQVKDLLKDLSSLFENPPPGIDEIVAIAQVLKLVKSSSVENVAKGHGPITRIVFDTAPTGHTLRLLNLPTFLDSFIAKAIKLRARVGNVLTSLSQFLGMENTFESKLNKVVSKLEDFQNDMQQLKSLLTNPKATEFVVVTIPTTMAVRESRRLLDSLDEADIATKHIVVNRILSPQLDVSYLNSIQEAQQECLERLQNLES--------KGIEITKVPYFDREVYGIDGLAHMGTVAFSQGNS-NWEDITQGLPQ 490
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: R1FYY7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FYY7_EMIHU) HSP 1 Score: 231 bits (588), Expect = 2.000e-64 Identity = 135/369 (36.59%), Postives = 213/369 (57.72%), Query Frame = 2
Query: 584 RNGVSERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRIIGLDNLSAMEVDTVEAVKEFEEALSSFDVSGMAEEMGVPKDMVESFGLSEFSEVLTNPPPGIDELVALSRVLKLARSED-----------------------------------SPFYKQVIQLRGRMGGILNLLTGMFGGGNNVVKKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPEYVARLHKGQSACISRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRFLGTAAYGGGNEGNWKQLSSDAEQRFIILGGK 1585
++G ++R + GGKGGVGKTS+++A+A++ AD GL TL++STDPAHSL DAL QD+SGG PV + G +NL AMEV+T +AV F A+S F + + G+ ++++ GL EF+++L N PPG+DEL+AL+ L + R + +V+ L+ R+ + LL G+ GG N+ K + AV +LQ +++R+ LR+L ++D T+F +V IP++LA+AE RLL AL QG+ V +++VNQ G E + RL G + G L +S +P+FD+E+ GV+PL+++ + A+ G N W+ L +D + RF+++GGK
Sbjct: 3 QSGAAQRLILVGGKGGVGKTSSSSAIAVRLADTGLSTLIVSTDPAHSLSDALMQDVSGGSPVGVAGCENLQAMEVETADAVDRFRAAVSGFRAADLGLG-GLAEEVLGQLGLDEFADILDNVPPGLDELLALAETLAVVRGAEPDSDGAASLTGFERVVFDTAPTGHTLRLLAFPEFLDSLLGKVVALKARLLAAIGLLKGVLGG-NDPTDKIEAAVARLQRWRDRVASLRELLTDEDVTDFVVVGIPSRLAVAECARLLSALADQGVPVSHLIVNQ------GRE------------LKRLD-------GSSPLGELALSRLPFFDLEMRGVFPLQYVASQAFRGTNADAWEDLLADQKDRFVLVGGK 344
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: A0A1X6PKT4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKT4_PORUM) HSP 1 Score: 232 bits (592), Expect = 1.120e-63 Identity = 134/336 (39.88%), Postives = 201/336 (59.82%), Query Frame = 2
Query: 590 GVSERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRIIGLDNLS-AMEVDTVEAVKEFEEALSSFDVSGMAEEMGVPKDMVESFGLSEFSEVLTNPPPGIDELVALSRVLKLARS--------EDSP----------------FYKQVIQLRGRMGGILNLLTGMFGGGNNVVKKADMAVEKLQG----YKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPEYVARLHKGQSACISRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRFLGTAAY 1510
G + RFVF GGKGGVGKTS AAA+ ++ ADAG+RTLV+STDPAHSLGDAL D+SGG+P+ + +NL AME+DT AV +F + S GV D+ G+ EF+++L N PPG+DELVAL +V+ L R+ + +P F +V++L+ R+ G +N + G+FGGG + AD ++ ++ M LR + ++Q+AT+F +VTIPT LA+AES+RL+ AL T +AV N++VN ++ ++ +V RL KGQ+ C+ +L+ + + ++ VPYFD+EV G + LR +G +
Sbjct: 510 GAAARFVFVGGKGGVGKTSCAAAMGVKLADAGIRTLVLSTDPAHSLGDALTMDLSGGKPLAVDATNNLLYAMEIDTAAAVSQFRSVIQSLATGTGG---GVGGDLARKLGVGEFADILDNTPPGVDELVALVQVIDLVRTGGFDRVVIDTAPTGHTLRLLAFPEFIDAFLGRVLRLKARLDGAINKVKGLFGGGKKGEEAADASLTSASAAVDRFRRNMTALRAVIQDQEATQFAVVTIPTALAVAESERLVAALRTDHVAVANVIVNLVLPANAAEPFVRRLVKGQTGCLEKLRTAVK-------EKGVAVTQVPYFDVEVRGEFGLRAMGEVMF 835
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: A0A7S2B6R7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6R7_9STRA) HSP 1 Score: 230 bits (587), Expect = 1.150e-63 Identity = 139/378 (36.77%), Postives = 213/378 (56.35%), Query Frame = 2
Query: 569 ELLEARNGVSERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGE--PVRIIGLD-NLSAMEVDTVEAVKEFEEALSSFDVSGMAEEMG--VPKDMVESFGLSEFSEVLTNPPPGIDELVALSRVLKLARSEDSP------------------------------FYKQVIQLRGRMGGILNLLTGMFG-GGNNVVKKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPEYVARLHKGQSACISRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRFLGTAAYGGGNEGN-WKQLS--SDAEQRFIILGGK 1585
ELL G RFVF GGKGGVGKTS ++A+A+ ADAGLRTLV+S DPAHSLGD L D+ G V I G D NL AME+D ++KEF +A++ FD++ +A+E+G D + GL EF+ +L NPPPG+DELVAL+ V++LAR D+ F +++ R ++ +L L T M G + K D AV Y+ ++ LRDL + AT+F +V PT LA+AE++RL+ +L G+ R+++VN+++ ++ ++ +L KGQ++ + R+ +D++ VP+FD E+ G Y LR++ A+ +G+ W L+ +QR +++GGK
Sbjct: 52 ELLSPPAGEGLRFVFVGGKGGVGKTSCSSAIAVTLADAGLRTLVVSVDPAHSLGDVLATDLPRGSNNAVPIFGCDDNLYAMEIDAEASLKEFTDAIAGFDLAAVAKEIGGQAGADFASNLGLDEFAGILRNPPPGVDELVALNAVVRLARGTDASGMQSFDRVIIDTAPTGHALRLLSAPEFLEDFLDKLLSFRSKLDSVLGLATTMLGLNAGALTAKLDAAVIAADNYRTQIKSLRDLLTDPTATQFVVVAGPTALAVAETERLVSSLEDSGVTTRSLIVNKVLGANTNEKFTDQLKKGQTSAMERVDSRLS--------KKVDVTSVPFFDTELVGTYALRYMAQNAFEPTAQGSSWDTLAHGDSGDQRLVLVGGK 421
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Match: A0A7S2ZDM4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDM4_9RHOD) HSP 1 Score: 216 bits (550), Expect = 4.340e-61 Identity = 132/334 (39.52%), Postives = 202/334 (60.48%), Query Frame = 2
Query: 587 NGVSERFVFFGGKGGVGKTSTAAAVAIQCADAGLRTLVISTDPAHSLGDALDQDISGGEPVRIIGLD-NLSAMEVDTVEAVKEFEEALSSFDVSGMAEEMGVPKDMVESFGLSEFSEVLTNPPPGIDELVALSRVLKLARS--------EDSP----------------FYKQVIQLRGRMGGILNLLTGMFGGGNNVVKKADMAVEKLQGYKERMMELRDLFKNQDATEFCIVTIPTQLAIAESKRLLEALNTQGIAVRNIVVNQIVSPDSGPEYVARLHKGQSACISRLQKLADGAAGGAADGALDISPVPYFDMEVAGVYPLRFLGTAAYG 1513
+G +F F GGKGGVGKTST+AA+ ++ AD+GL+TL+ISTDPAHSL DALD +SG +PV + G + NL AMEVDT A+ EF + L + G G+ D+ FGL+EFS++L N PPGIDELVAL++V+ L +S + +P F Q+++L+ R+ ++ + +F G + V +A ++++ +++ M EL++LF + + T+FC+VTIPT+LA+AES+RL+ +L + I V N++VNQI+ + Y+ R K QS + L+ ++ + + I+ V YFD EV GV LR L +G
Sbjct: 103 SGPDNKFCFVGGKGGVGKTSTSAALGVESADSGLKTLIISTDPAHSLSDALDIQLSG-DPVVVDGTEGNLFAMEVDTKRAIGEFRDLLQQYVNEGT----GIGADLARRFGLAEFSDILANTPPGIDELVALTQVVSLVKSGQFKRVIVDTAPTGHTLRLLAFPDFIDQFLGQILRLKRRIDDLVASVKNVFTGASTEVGRA---ADRVETFRKNMTELKELFADSERTQFCVVTIPTELAVAESERLVASLKSSKITVNNLIVNQILPEHATEAYLNRRVKEQSKSVDELESISS------EEFPISIAKVNYFDEEVRGVERLRNLSDKIFG 422 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1146.1280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1146.1280.1 >prot_Ecto-sp13_S_contig1146.1280.1 ID=prot_Ecto-sp13_S_contig1146.1280.1|Name=mRNA_Ecto-sp13_S_contig1146.1280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=471bp MPHPPALRMCQSLPTALLSLAYLTASSTTAFVLGPLRASRVTSASNRRALback to top mRNA from alignment at Ecto-sp13_S_contig1146:11929..18357+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1146.1280.1 ID=mRNA_Ecto-sp13_S_contig1146.1280.1|Name=mRNA_Ecto-sp13_S_contig1146.1280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6429bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1146:11929..18357+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1146:11929..18357+ >mRNA_Ecto-sp13_S_contig1146.1280.1 ID=mRNA_Ecto-sp13_S_contig1146.1280.1|Name=mRNA_Ecto-sp13_S_contig1146.1280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1413bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1146:11929..18357+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |