mRNA_Ecto-sp13_S_contig1146.1278.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: D7FUN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN6_ECTSI) HSP 1 Score: 212 bits (540), Expect = 1.180e-61 Identity = 110/114 (96.49%), Postives = 111/114 (97.37%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCPQEFDL---LESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLALEV 333
GELANGMEYYVRANRHPRERAELRIVIKVGSV+ETEQERGVAHLIEHLAFRASRTCPQEFDL LESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLALEV
Sbjct: 60 GELANGMEYYVRANRHPRERAELRIVIKVGSVMETEQERGVAHLIEHLAFRASRTCPQEFDLVKELESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLALEV 173
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: A0A6H5K2T2_9PHAE (Peptidase_M16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T2_9PHAE) HSP 1 Score: 125 bits (313), Expect = 4.530e-34 Identity = 64/74 (86.49%), Postives = 67/74 (90.54%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCPQEFDLLESHGIKFGAHQ 222
GELANGMEYYVRANRHPRERAELRIVIKVGSV+ETEQERGVAHLIEHLAFRASRTCPQEFDL++ I HQ
Sbjct: 60 GELANGMEYYVRANRHPRERAELRIVIKVGSVMETEQERGVAHLIEHLAFRASRTCPQEFDLVKE-AIGVARHQ 132
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: A0A3D4TEG6_9BACT (Peptidase_M16 domain-containing protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A3D4TEG6_9BACT) HSP 1 Score: 122 bits (306), Expect = 4.770e-33 Identity = 56/113 (49.56%), Postives = 83/113 (73.45%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCPQE--FDLLESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLALEV 333
G+LANG+ YY+R N+ PR RAELR+V+K GSVLE++Q++G+AH +EH+AF ++ ++ + LE G+ FGA NAYTSF+ETVYEL +P D P + ++ ++L+ A EV
Sbjct: 36 GKLANGLTYYIRQNKEPRNRAELRLVVKAGSVLESDQQQGLAHFVEHMAFNGTKNFKKQELINFLEKSGVNFGADLNAYTSFDETVYELQLPTDSPAVFKKGFQILKDWAHEV 148
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: A0A7S0MFY0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFY0_9CRYP) HSP 1 Score: 119 bits (297), Expect = 3.760e-31 Identity = 63/113 (55.75%), Postives = 80/113 (70.80%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCP--QEFDLLESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLALEV 333
G L NG+ YYV+ N+ P R ELR+V+KVGSV ETE+E G+AH++EHLAFR + + LE+ G +FGA QNAYTSF+ETVY LHVP D LLE++L VLR+ A V
Sbjct: 17 GTLKNGLTYYVQNNKKPNARCELRLVVKVGSVFETEEECGIAHMVEHLAFRGTAMYDTFEVVRFLETIGARFGACQNAYTSFDETVYYLHVPIDTDGLLEKALTVLREWAFAV 129
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: A0A2V8LLW8_9BACT (Peptidase_M16 domain-containing protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8LLW8_9BACT) HSP 1 Score: 118 bits (295), Expect = 1.030e-30 Identity = 56/110 (50.91%), Postives = 81/110 (73.64%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCPQE--FDLLESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLA 324
G+ ANGM YY+R N+ P +RAELR+V+K GS+LE + ++G+AHL+EH+AF ++ P+ +ES G++FGA NAYTSF+ETVY L VP D+P +++R+L VL A
Sbjct: 52 GKFANGMRYYIRRNKKPEKRAELRLVVKAGSILEDDDQQGLAHLVEHMAFNGTKHFPKNEIISFMESLGMRFGADINAYTSFDETVYMLTVPTDKPEMMDRALLVLEDWA 161
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: A0A2V8Q3U4_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8Q3U4_9BACT) HSP 1 Score: 120 bits (302), Expect = 1.020e-29 Identity = 57/110 (51.82%), Postives = 83/110 (75.45%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCPQE--FDLLESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLA 324
G+ ANGM YYVRAN+ P +RAELR+V+K GS+LE + ++G+AHL+EH+AF ++ P+ +ES G++FGA NA+TSF+ETVYEL VP D+P +L+++L +L A
Sbjct: 47 GKFANGMSYYVRANKKPEKRAELRLVVKAGSILEDDDQQGLAHLVEHMAFNGTKHFPKNEIISFMESIGMRFGADVNAFTSFDETVYELTVPTDKPEVLDKALLILEDWA 156
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: A0A7C6ADJ7_9BACT (Insulinase family protein n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7C6ADJ7_9BACT) HSP 1 Score: 121 bits (303), Expect = 1.190e-29 Identity = 56/110 (50.91%), Postives = 80/110 (72.73%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCPQE--FDLLESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLA 324
G L NG++YY+R NR P +RAELR+V+K GSVLE + ++G+AH +EH+AF +++ P+ D LE G+KFG NAYTSF+ETVY L VP D P ++E++L +L + A
Sbjct: 42 GTLENGLKYYIRENRKPEKRAELRLVVKAGSVLEDDDQQGIAHFVEHMAFNGTKSYPKHALIDFLEKAGVKFGPDLNAYTSFDETVYMLQVPTDTPEVIEKALHILEEWA 151
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: A0A7Y4UD36_9BACT (Insulinase family protein (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4UD36_9BACT) HSP 1 Score: 118 bits (295), Expect = 2.420e-29 Identity = 56/110 (50.91%), Postives = 79/110 (71.82%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCPQE--FDLLESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLA 324
G ANGM YY+RAN+ P + AELR+ IK GS+LE + ++G+AH +EH+AF ++ P++ +ES G++FGA NAYTSF+ETVY+L VP D+P LER+ +VL A
Sbjct: 51 GTFANGMRYYIRANKKPEKHAELRLAIKAGSILEDDDQQGMAHFVEHMAFNGTKNFPKQDIVTFIESLGMRFGADLNAYTSFDETVYQLQVPTDKPGALERAFQVLEDWA 160
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: A0A143PHD1_LUTPR (Protease 3 n=4 Tax=Luteitalea TaxID=2004797 RepID=A0A143PHD1_LUTPR) HSP 1 Score: 119 bits (298), Expect = 5.650e-29 Identity = 55/110 (50.00%), Postives = 80/110 (72.73%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCPQE--FDLLESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLA 324
G L+NGM YY+RAN+ P+ RAE+R+V+ GSVLE + +RG+AH +EH+AF +R P+ L+S G++FGAH NA TSF++TV+EL +P D P +++RSL +L A
Sbjct: 58 GTLSNGMRYYIRANKQPQNRAEIRLVVNAGSVLEDDDQRGLAHFVEHMAFNGTRHFPKHDVIAFLQSTGMRFGAHINANTSFDQTVFELRIPTDSPAVIDRSLLILEDWA 167
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Match: A0A835ZEV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEV6_9STRA) HSP 1 Score: 119 bits (298), Expect = 5.840e-29 Identity = 61/114 (53.51%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 1 GELANGMEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCPQEFDL---LESHGIKFGAHQNAYTSFEETVYELHVPADQPVLLERSLRVLRQLALEV 333
GEL NGM+YYV N P+ R EL + IK GS+ E ERGVAH++EHL FR+S EF++ LE+ GIKFG HQNAYTSF+ TVY+L VP D +L++ +R L QL+L++
Sbjct: 144 GELENGMKYYVLHNPEPQNRVELSVAIKSGSIHEANNERGVAHMVEHLGFRSSEGMEGEFEIIKQLEALGIKFGPHQNAYTSFDRTVYQLQVPLDDMDMLKQGMRALCQLSLQM 257 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1146.1278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1146.1278.1 >prot_Ecto-sp13_S_contig1146.1278.1 ID=prot_Ecto-sp13_S_contig1146.1278.1|Name=mRNA_Ecto-sp13_S_contig1146.1278.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp MEYYVRANRHPRERAELRIVIKVGSVLETEQERGVAHLIEHLAFRASRTCback to top mRNA from alignment at Ecto-sp13_S_contig1146:588..2104- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1146.1278.1 ID=mRNA_Ecto-sp13_S_contig1146.1278.1|Name=mRNA_Ecto-sp13_S_contig1146.1278.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1517bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1146:588..2104- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1146:588..2104- >mRNA_Ecto-sp13_S_contig1146.1278.1 ID=mRNA_Ecto-sp13_S_contig1146.1278.1|Name=mRNA_Ecto-sp13_S_contig1146.1278.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=318bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1146:588..2104- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |