mRNA_Ecto-sp13_S_contig114.1225.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: D7FJK6_ECTSI (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJK6_ECTSI) HSP 1 Score: 472 bits (1214), Expect = 1.050e-160 Identity = 238/257 (92.61%), Postives = 242/257 (94.16%), Query Frame = 1
Query: 28 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALTCTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDSCTDGAGFKV 798
SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENP GTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQR+WADNQ S CTITFDPETEG LA+ALDYFQYQLKGVSFLPR DYGAFPQMPYEAISEDEYKSQISKLR L+FSRRRGQTRGEGDG RVEEVPDRYCESDSCTDGAGF+V
Sbjct: 466 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPEGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRYWADNQVS--------CTITFDPETEGHHLAHALDYFQYQLKGVSFLPRMDYGAFPQMPYEAISEDEYKSQISKLRHLNFSRRRGQTRGEGDGVRVEEVPDRYCESDSCTDGAGFRV 714
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: A0A6H5KM58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM58_9PHAE) HSP 1 Score: 363 bits (933), Expect = 2.020e-119 Identity = 184/220 (83.64%), Postives = 189/220 (85.91%), Query Frame = 1
Query: 220 GMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALT---------------------------CTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDSCTDGAGFKV 798
GMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENP GTMVVEVPVDAGE VRTAQDLSMWEQLSFAAFLQR+WADNQASFLCFGALT CTITFDP+TEGK LA+ALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDSCT+ AGF+V
Sbjct: 411 GMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPEGTMVVEVPVDAGEAVRTAQDLSMWEQLSFAAFLQRYWADNQASFLCFGALTLRTWIFTSHASTLCIQRYTPFVFVQVSCTITFDPDTEGKHLAHALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDSCTNRAGFRV 630
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: A0A835YMD1_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD1_9STRA) HSP 1 Score: 325 bits (832), Expect = 2.700e-103 Identity = 162/249 (65.06%), Postives = 199/249 (79.92%), Query Frame = 1
Query: 28 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALTCTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDSC 774
SMSGLAQFVAARGLG L+ WCE GY AV D LST+FG+ SIKTTSIKPSGTVSLLAGATPGMHYPE+RFY+RRVR+A+++++L PLR AG +EP A NP GT+VVE+PVDAGEGVRT+++L++WEQLSFAAFLQR+WADNQ S CT+TFDPETE QL +ALDYFQYQLKGVSFLPR GA+PQMPYEAIS +Y ++ + P++F+ RG R + A +EVPD++C++D+C
Sbjct: 445 SMSGLAQFVAARGLGALRAWCEHGYAAVQAADSALSTRFGVHRSIKTTSIKPSGTVSLLAGATPGMHYPEARFYVRRVRVAAESELLAPLRAAGLPVEPCAMNP-GTVVVEIPVDAGEGVRTSRELTLWEQLSFAAFLQRYWADNQVS--------CTVTFDPETEAAQLPHALDYFQYQLKGVSFLPRIAAGAYPQMPYEAISAAQYAERMRSVSPVNFAALRG--RRQRRAADADEVPDKFCDTDAC 682
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: A0A835ZHW0_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW0_9STRA) HSP 1 Score: 307 bits (786), Expect = 4.450e-96 Identity = 155/248 (62.50%), Postives = 186/248 (75.00%), Query Frame = 1
Query: 28 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALTCTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDS 771
SMSGLAQF AARGL TL+ WC+ GY + D LS++ G+P SIKTTSIKPSGTVSLLAGATPGMHYPE+RFY+RRVR+A+D +L LR AG R+EP A +P T VVE VDAGEGVRTA++L +WEQLSFAAFLQR WADNQ S CT+TFDPETE QL +ALDYFQYQLKGVSFLPR GA+PQMPYEAI+ +Y ++S + P++F+ G V+EVPD++C+SDS
Sbjct: 461 SMSGLAQFAAARGLPTLRAWCDRGYATIQTTDAALSSRLGVPRSIKTTSIKPSGTVSLLAGATPGMHYPEARFYVRRVRVAADCALLPALRAAGLRVEPCALSPATTAVVEFAVDAGEGVRTARELPLWEQLSFAAFLQRHWADNQVS--------CTVTFDPETEAAQLPHALDYFQYQLKGVSFLPRIAAGAYPQMPYEAITAQQYAERMSAVTPVNFNFNCAARAGRRGADDVDEVPDKFCDSDS 700
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: A0A329SPL4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SPL4_9STRA) HSP 1 Score: 286 bits (731), Expect = 4.950e-94 Identity = 143/246 (58.13%), Postives = 174/246 (70.73%), Query Frame = 1
Query: 28 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALTCTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCES 765
SMSG+AQF++ RGL Q WCE GY+ V +D+ LS +F IP SIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRR+R+ + +D+L L+ A Y +EPA E+P T+VV +PVD GEGVRT D+S WEQ + AAFLQR WADNQ S CT+TFDP+TEG QLAN LDYFQYQLKG+S LP+ + GA+ QMPYE IS Y + PL F+ + V +VPD+YCE+
Sbjct: 10 SMSGIAQFISNRGLNDFQRWCEAGYDRVQEVDKQLSARFAIPRSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRMRLDNHSDLLPALQRAEYAIEPAHESPNTTLVVSIPVDVGEGVRTLSDVSAWEQFALAAFLQRHWADNQVS--------CTVTFDPKTEGPQLANMLDYFQYQLKGISLLPKLELGAYKQMPYEEISARTYHKMNQSIEPLQFNVIQSIE-------TVIDVPDKYCEA 240
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: A0A2E0BTC6_9FLAO (Fused protease/ribonucleoside-triphosphate reductase (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2E0BTC6_9FLAO) HSP 1 Score: 280 bits (717), Expect = 7.040e-91 Identity = 140/249 (56.22%), Postives = 181/249 (72.69%), Query Frame = 1
Query: 28 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALTCTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDSC 774
S+SG+AQF+ RGL L+EW +GY+ + D+ S F IP SIKTTS+KPSGTVSLLAG+TPG+HYPESRFYIRR+R++ +++++ PL++AGY++EPA + T+VVE+PVD GEG+RTA DLS+WEQ S AAFLQR WADNQ S CT+TF+PETE +++ N L+YFQY LKG+S LPR DYGA+ QMPYEAI E EY QISKL L F G + E A +E ++C+ D C
Sbjct: 69 SVSGVAQFITHRGLDELKEWLNDGYDVIQDWDDVYSDWFAIPKSIKTTSVKPSGTVSLLAGSTPGLHYPESRFYIRRIRLSINSELVEPLKKAGYKIEPAFGSEDSTLVVEIPVDVGEGIRTAGDLSIWEQFSLAAFLQRHWADNQVS--------CTVTFNPETESEEIPNVLNYFQYHLKGISLLPRHDYGAYKQMPYEAIDEKEYNKQISKLGKLSF----GVIKSEE--ANIE----KFCDGDFC 299
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: A0A8K1CJE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJE6_PYTOL) HSP 1 Score: 299 bits (766), Expect = 1.810e-90 Identity = 150/246 (60.98%), Postives = 182/246 (73.98%), Query Frame = 1
Query: 28 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALTCTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCES 765
SMSG+AQF+ G+ L++WCE GY+AV DE S +F IP SIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRR+R+ ++++ LR+AGY LEPA E+P T+VV +PVD GEG+RT QD+S WEQLS AAFLQR WADNQ S CT+TFDPE EG+QLA ALDYFQYQLKGVS LPR GA+ QMPYE+I E Y ++S+L+PL F T D V++VPD++CE+
Sbjct: 906 SMSGIAQFITHNGIDELRQWCESGYDAVHEYDEVFSERFAIPRSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRMRLDKASELVSALRDAGYDLEPAVESPEMTLVVSIPVDVGEGIRTIQDISAWEQLSLAAFLQRHWADNQVS--------CTVTFDPEREGEQLAPALDYFQYQLKGVSLLPRLAMGAYAQMPYESIDEATYHEKLSRLKPLRFD-----TSLHVDANAVQDVPDQFCEA 1138
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: A0A2E7W6S1_9EURY (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E7W6S1_9EURY) HSP 1 Score: 290 bits (741), Expect = 4.490e-90 Identity = 143/249 (57.43%), Postives = 183/249 (73.49%), Query Frame = 1
Query: 28 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALTCTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDSC 774
SMSG+AQFVA RG+G L+ W + GY + ++DE S F IP SIKTTSIKPSGTVSLLAGATPG+H+PESR+YIRR+R+ D++++ PL +AGY++EPA + TMVVE+PVD GEGVRT D+SMWEQLS AA QR+WADNQ S CT+TF+PETEG Q+ANALD +QYQLKG+SFLP+ D+GA+PQMPYE+I + Y + S L L F R +G+ E V +R+C++D C
Sbjct: 426 SMSGIAQFVANRGVGELRSWMDIGYGHIQKLDEKYSNWFAIPKSIKTTSIKPSGTVSLLAGATPGIHFPESRYYIRRMRLGKDSNLVAPLEKAGYKIEPAFGSEETTMVVEIPVDLGEGVRTLDDVSMWEQLSMAALAQRYWADNQVS--------CTVTFNPETEGSQIANALDIYQYQLKGISFLPKLDFGAYPQMPYESIDSETYHNLKSGLGKLSFGRIKGE----------EVVVERFCDNDVC 656
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: A0A661VGD2_9CHLR (Ribonucleoside-triphosphate reductase (thioredoxin) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A661VGD2_9CHLR) HSP 1 Score: 290 bits (741), Expect = 4.490e-90 Identity = 142/249 (57.03%), Postives = 182/249 (73.09%), Query Frame = 1
Query: 28 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALTCTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDSC 774
SMSG+AQF+A RG+G L++W +EGYE + +D++ S IP SIKTTSIKPSGTVSLLAGATPG+H+PESR+YIRR+R+ D++++ PL +AGY++EPA + T+VVE+PVD G GVRT +SMWEQLS AA QR+WADNQ S CT+TFDPE EG Q+A ALD +QYQLKG+SFLPR DYGA+PQMPYEAI ++ Y + S L L F R +G+ E V +R+C+SD C
Sbjct: 431 SMSGIAQFIANRGIGKLRQWMDEGYEHIQDLDKEYSDWMAIPRSIKTTSIKPSGTVSLLAGATPGIHFPESRYYIRRMRLGKDSNLVAPLEKAGYKIEPAFGSEDTTLVVEIPVDVGAGVRTVDKVSMWEQLSIAALAQRYWADNQVS--------CTVTFDPEEEGPQIAAALDIYQYQLKGISFLPRLDYGAYPQMPYEAIDKESYDNMKSALGKLSFGRIKGE----------EVVVERFCDSDVC 661
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Match: W4GZS7_9STRA (Ribonucleoside-triphosphate reductase (thioredoxin) n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZS7_9STRA) HSP 1 Score: 291 bits (746), Expect = 5.660e-90 Identity = 153/249 (61.45%), Postives = 177/249 (71.08%), Query Frame = 1
Query: 28 SMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIPTSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRMASDADVLGPLREAGYRLEPAAENPGGTMVVEVPVDAGEGVRTAQDLSMWEQLSFAAFLQRFWADNQASFLCFGALTCTITFDPETEGKQLANALDYFQYQLKGVSFLPRTDYGAFPQMPYEAISEDEYKSQISKLRPLDFSRRRGQTRGEGDGARVEEVPDRYCESDSC 774
SMSG+AQF+ RGL L++WC +GY+A+ D+ S IP SIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVR+ +++L LR AGY LEPAAE P T+VV +PVD GE VRT LS WEQLS A+FLQR+WADNQ S CTITFDP EG QL +AL YFQYQLKGVS LP+ GA+ QMPYE ISE YKS +S L P+ F R +TRG EVPDR+C+S SC
Sbjct: 544 SMSGIAQFITQRGLHELKDWCMQGYDAIQAYDKTYSDFLAIPRSIKTTSIKPSGTVSLLAGATPGMHYPESRFYIRRVRLDRGSELLPALRAAGYHLEPAAEAPNETLVVSIPVDVGENVRTLSQLSAWEQLSLASFLQRYWADNQVS--------CTITFDPVLEGPQLEHALAYFQYQLKGVSLLPKVPLGAYAQMPYEEISEATYKSMVSALSPVSF--REIKTRG-----GPVEVPDRFCDSSSC 777 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig114.1225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig114.1225.1 >prot_Ecto-sp13_S_contig114.1225.1 ID=prot_Ecto-sp13_S_contig114.1225.1|Name=mRNA_Ecto-sp13_S_contig114.1225.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=267bp MSRPFFRLKSMSGLAQFVAARGLGTLQEWCEEGYEAVSRIDEDLSTQFGIback to top mRNA from alignment at Ecto-sp13_S_contig114:36669..38735- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig114.1225.1 ID=mRNA_Ecto-sp13_S_contig114.1225.1|Name=mRNA_Ecto-sp13_S_contig114.1225.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2067bp|location=Sequence derived from alignment at Ecto-sp13_S_contig114:36669..38735- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig114:36669..38735- >mRNA_Ecto-sp13_S_contig114.1225.1 ID=mRNA_Ecto-sp13_S_contig114.1225.1|Name=mRNA_Ecto-sp13_S_contig114.1225.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=801bp|location=Sequence derived from alignment at Ecto-sp13_S_contig114:36669..38735- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |