mRNA_Ecto-sp13_S_contig11384.1212.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11384.1212.1
Unique NamemRNA_Ecto-sp13_S_contig11384.1212.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: D7G334_ECTSI (Metallophos domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G334_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 3.200e-28
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 1
Query:   43 ARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDLGGE 204
            + AIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDLGG+
Sbjct:  280 SEAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDLGGD 333          
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: X1IE94_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X1IE94_9ZZZZ)

HSP 1 Score: 72.0 bits (175), Expect = 1.150e-14
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 1
Query:    1 VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDL 195
            V  +FSGH HRN   +  ++  V TSSSG PLG DP GFR+V+V+  RIEH+Y+     P+ ++L
Sbjct:   41 VDIVFSGHYHRNAYVKDGELELVTTSSSGKPLGEDPIGFRIVKVYPDRIEHKYYSYKEMPKKVNL 105          
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: A0A023F625_TRIIF (Putative purple acid phosphatase (Fragment) n=3 Tax=Triatominae TaxID=70999 RepID=A0A023F625_TRIIF)

HSP 1 Score: 72.4 bits (176), Expect = 6.870e-14
Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 1
Query:    1 VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDL 195
            VK+I SGH HRN      D+ SVVTS+ G  LG D  GFR+V+V   +I HEY+D D  P+ +DL
Sbjct:  156 VKYIXSGHFHRNAGGFYKDLESVVTSAIGGQLGNDKSGFRIVKVMDTKITHEYYDFDNCPKTVDL 220          
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: A0A6M1ZW31_9BACT (3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZW31_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 7.230e-14
Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 1
Query:    1 VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDLGGE 204
            V   F+GH HRN       M  V TS+ G P+G DP GFR+V+VF  R+EHEYF ID  P+ + L  E
Sbjct:  244 VTACFAGHYHRNAYGVYKGMEVVTTSALGKPIGKDPSGFRIVKVFEDRVEHEYFGIDEVPESVSLQSE 311          
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: A0A357YIP8_9PORP (Metallophosphatase n=1 Tax=Porphyromonadaceae bacterium TaxID=2049046 RepID=A0A357YIP8_9PORP)

HSP 1 Score: 73.2 bits (178), Expect = 7.690e-14
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1
Query:    1 VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDL 195
            VK +FSGH HRN  A+  ++  V+TSS G PLG DP G R+++V+  +I HEY+ +D  P  I+ 
Sbjct:  217 VKAVFSGHLHRNAYAKFKEIELVITSSLGKPLGDDPSGLRIIKVYEDKIMHEYYGLDCIPDSINF 281          
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: A0A2E1KUK6_9PLAN (Phosphoesterase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E1KUK6_9PLAN)

HSP 1 Score: 70.9 bits (172), Expect = 9.740e-13
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 1
Query:    1 VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDLGGE 204
            V+ IF+GH HRN   +A  +  + +   G PLG DP GFRVV+VF  R+EH+Y+ +D  P  I L G+
Sbjct:  249 VRAIFAGHYHRNSYGQAGTIAMITSGPVGRPLGKDPSGFRVVKVFRDRLEHKYYSLDQVPATIPLTGQ 316          
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: A0A7X7TMU6_9BACT (Metallophosphatase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X7TMU6_9BACT)

HSP 1 Score: 70.1 bits (170), Expect = 1.170e-12
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 1
Query:    1 VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGI 189
            V  IFSGH H+N +AR   ++ + TS+ G PLG DP GFR+V+VF  RIE  Y+ +D  P  I
Sbjct:  226 VNAIFSGHLHKNAQARFGQIQLITTSALGKPLGNDPSGFRIVKVFDDRIESNYYGLDHIPDAI 288          
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: A0A7R9MRH4_9ACAR (Hypothetical protein n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9MRH4_9ACAR)

HSP 1 Score: 68.9 bits (167), Expect = 1.480e-12
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 1
Query:    1 VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDL 195
            V++IF+GH HRN      DM  VVTS+ GA LG D  G RVVRV+   I+H+Y+ ID  P  I++
Sbjct:  158 VRYIFTGHYHRNAGGFYKDMELVVTSAVGAQLGTDKSGLRVVRVYENSIQHKYYAIDEIPLDIEI 222          
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: A0A2E3MX72_9PLAN (Phosphoesterase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3MX72_9PLAN)

HSP 1 Score: 70.1 bits (170), Expect = 1.780e-12
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 1
Query:    1 VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDL 195
            V+ IF+GH HRN   +A ++  + +   G PLG DP GFRVV+V+  R+EH+Y+  DA P  I L
Sbjct:  249 VRAIFAGHYHRNSYGKAGNVEMITSGPVGRPLGKDPSGFRVVKVYRDRLEHKYYPFDAVPTQIQL 313          
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Match: A0A7R9LPY3_9ACAR (Serine/threonine-protein phosphatase CPPED1 n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9LPY3_9ACAR)

HSP 1 Score: 68.9 bits (167), Expect = 3.300e-12
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 1
Query:    1 VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIEHEYFDIDAPPQGIDL 195
            V++IF+GH HRN      DM  VVTS+ GA LG D  G RVVRV+   I+H+Y+ ID  P  I++
Sbjct:  234 VRYIFTGHYHRNAGGFYKDMELVVTSAVGAQLGTDKSGLRVVRVYENSIQHKYYAIDEIPLDIEI 298          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11384.1212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G334_ECTSI3.200e-2894.44Metallophos domain-containing protein n=1 Tax=Ecto... [more]
X1IE94_9ZZZZ1.150e-1447.69Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A023F625_TRIIF6.870e-1450.77Putative purple acid phosphatase (Fragment) n=3 Ta... [more]
A0A6M1ZW31_9BACT7.230e-1448.533',5'-cyclic adenosine monophosphate phosphodieste... [more]
A0A357YIP8_9PORP7.690e-1446.15Metallophosphatase n=1 Tax=Porphyromonadaceae bact... [more]
A0A2E1KUK6_9PLAN9.740e-1345.59Phosphoesterase n=1 Tax=Planctomycetaceae bacteriu... [more]
A0A7X7TMU6_9BACT1.170e-1249.21Metallophosphatase n=1 Tax=Bacteroidales bacterium... [more]
A0A7R9MRH4_9ACAR1.480e-1249.23Hypothetical protein n=1 Tax=Oppiella nova TaxID=3... [more]
A0A2E3MX72_9PLAN1.780e-1246.15Phosphoesterase n=1 Tax=Planctomycetaceae bacteriu... [more]
A0A7R9LPY3_9ACAR3.300e-1249.23Serine/threonine-protein phosphatase CPPED1 n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11384contigEcto-sp13_S_contig11384:2155..3309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score110.2
Seed ortholog evalue4.1e-22
Seed eggNOG ortholog2880.D7G334
Preferred nameCPPED1
Model size210
KEGG koko:K18914,ko:K21814,ko:K22390
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0005829,GO:0005886,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0009987,GO:0012505,GO:0016020,GO:0016192,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0035578,GO:0036230,GO:0042119,GO:0042582,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071944,GO:0097708,GO:0099503
Exons2
EggNOG free text desc.acid phosphatase activity
EggNOG OGsCOG1409@1,KOG1378@2759
EC1.18.1.6,3.1.3.16
Cds size210
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462595.8770406-CDS-Ecto-sp13_S_contig11384:2154..22021681462595.8770406-CDS-Ecto-sp13_S_contig11384:2154..2202Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11384 2155..2202 +
1681462595.887041-CDS-Ecto-sp13_S_contig11384:3147..33091681462595.887041-CDS-Ecto-sp13_S_contig11384:3147..3309Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11384 3148..3309 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11384.1212.1prot_Ecto-sp13_S_contig11384.1212.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11384 2155..3309 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11384.1212.1

>prot_Ecto-sp13_S_contig11384.1212.1 ID=prot_Ecto-sp13_S_contig11384.1212.1|Name=mRNA_Ecto-sp13_S_contig11384.1212.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
VKFIFSGHCHRNYEARAIDMRSVVTSSSGAPLGPDPPGFRVVRVFSRRIE
HEYFDIDAPPQGIDLGGEP*
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mRNA from alignment at Ecto-sp13_S_contig11384:2155..3309+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11384.1212.1 ID=mRNA_Ecto-sp13_S_contig11384.1212.1|Name=mRNA_Ecto-sp13_S_contig11384.1212.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1155bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11384:2155..3309+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGAAATTCATCTTCTCCGGCCACTGCCACCGCAACTACGAGGCCAGGGT GAAACGGCCGATTGCCGTCGAAACGGCACCACAACCGACTCCCGCGGCCA GCGCCGGCGCCGGCCCTACCTCCGGTACCGACAAAAATGCCGCATCGGGG GGAGATCCCACCCACCCTCCCGGCGACGTCCCCGGGCTATCACCACCGCC GCCATCTGCGGGGGGCGCCGTGGATTCCAGCTCCGGCGATGGTGCCACGA TGACGGCGGCGGTAGGCCAGGATGGGAGCGCCGTCGTTGATGATGATGCG GCGTCGCGGCAAGTGGTGGTGGACGTCGGGGGGAAGGGCTCTGAGGATGA TTCGAGGAACGCTGTCGGTGGACAAGGGGAAGCTGAAGACGCGCCGGGAT CGATCTCGGATGATGATGAGGTGTGTTCAGGGAATCTGCTTGGTGCTAGG TTTAGTGCGAGGCGAAGGCTTTCTTTTTCATGGTCTGTTTGTCGTTTTGG TGGAATGCCCAGTCTTTGGTTTGTGAGTAATTGTGTGTTGGATCCGTTGA CCAACCCGACGCTGTTTTTGTTACTCAACTTGACGCGGCCCACCACCCCT ACCTACGCCCCGCCCACCCCGCCCACTGACTCGGAGTCTAAGTCCTGTTT TAGCGATCTCCCTACGGTATTGGGAGATCCATACAGAACCCGCCACCACT TGGGATATTTGGAAGTTTAGAAATTGAGGGTTCGAATTTCGCAGAATAAG TAAGAACTTGACCCGTACCCACGCGGGTTCTGCAGGGATCGGATCGGCAT ACAAAATCCGCTGACCTCGCTCGAAATTCGGGCAGCAACACGTTGCTCCG CTGACGGCATGCTGTCCAAGCATTTGCTGCCCTCCTCCCCCTAAGCCCGC CTGCCCTTCATCCTTATTCGGGCCAACACAGTACTCCGCTATTCTCCCTC GCACGATCGATCTGTCGACACCCAGGACACCGATACATCGGAGGCTATCG ACATGCGCAGTGTCGTGACGAGCTCGAGCGGAGCCCCTCTCGGCCCCGAT CCCCCCGGGTTTCGGGTGGTGCGCGTGTTCTCGCGGAGAATAGAGCACGA GTACTTCGACATCGATGCTCCGCCCCAGGGGATCGACCTTGGAGGGGAAC CGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11384:2155..3309+

>mRNA_Ecto-sp13_S_contig11384.1212.1 ID=mRNA_Ecto-sp13_S_contig11384.1212.1|Name=mRNA_Ecto-sp13_S_contig11384.1212.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=210bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11384:2155..3309+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGAAATTCATCTTCTCCGGCCACTGCCACCGCAACTACGAGGCCAGGGC
TATCGACATGCGCAGTGTCGTGACGAGCTCGAGCGGAGCCCCTCTCGGCC
CCGATCCCCCCGGGTTTCGGGTGGTGCGCGTGTTCTCGCGGAGAATAGAG
CACGAGTACTTCGACATCGATGCTCCGCCCCAGGGGATCGACCTTGGAGG
GGAACCGTGA
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