mRNA_Ecto-sp13_S_contig1137.1205.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1137.1205.1
Unique NamemRNA_Ecto-sp13_S_contig1137.1205.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: D7G7V3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V3_ECTSI)

HSP 1 Score: 743 bits (1917), Expect = 3.870e-265
Identity = 376/403 (93.30%), Postives = 384/403 (95.29%), Query Frame = 1
Query:  115 MRYDARWLTGTACLVASPRAFRPLSQPCCFRRHLNGDKRSISSTSCGITSNVGRERLQPLQRAASMLGMEAGLGVAGLSALSAVRLFTVSINPKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMAQTAETQLPSIGVETLTSALEDALGSKINAKRNGAARRRLSVTTAATKRRP 1323
            MRYDARWLTGTACLVASPRAFRPLSQPCCFRR+LNGDK SISSTSC  T NVGRERLQPLQRAASMLGM+AGLGVAGLSALSAVRLFT SI PKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRY VPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWV PSRKSERKARNFGFLLEDD +GGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSA+HPDRMRAVFLHVVSDG QQGKVPVP DRVVN VPVVYFRTYVGAA KAVELGLMDKKGLENVI AA EAMTKVPRQSSKWEDINRDLMMAQT+ETQLPSIGV+TLTSAL+DALGSKIN KRNGA RRR  VTTAATK+RP
Sbjct:    1 MRYDARWLTGTACLVASPRAFRPLSQPCCFRRYLNGDKWSISSTSCSSTGNVGRERLQPLQRAASMLGMDAGLGVAGLSALSAVRLFTASITPKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYRVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVCPSRKSERKARNFGFLLEDDEKGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAEHPDRMRAVFLHVVSDGPQQGKVPVPMDRVVNAVPVVYFRTYVGAAVKAVELGLMDKKGLENVITAAKEAMTKVPRQSSKWEDINRDLMMAQTSETQLPSIGVKTLTSALDDALGSKINTKRNGAVRRRPPVTTAATKKRP 403          
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A835YMG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG4_9STRA)

HSP 1 Score: 271 bits (694), Expect = 6.710e-83
Identity = 147/261 (56.32%), Postives = 181/261 (69.35%), Query Frame = 1
Query:  400 VRVVTDIDDTVKSSGNKRLFGV-PLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAM--TKVPRQSSKWEDINRDLMMA 1173
            +RVVTDIDDTVKSSGN RL GV PLGGIDAQY RG FYPGVFQF LEL+ +GVP    PL +AVLTARA+E LFALE+   H ++  +RQCG  NG++ WG GP+LYGSVKEW+  +RKS RK +NF  L+E DG+    R    E  Y+FIGDTGEGD +AG  M    P  +RA+FLH+V       KVP   D  VNGVPV++F+TYVGAA KA E GL+++  +E VI  A+E +  +  PR SSKW D+  D+  A
Sbjct:    3 LRVVTDIDDTVKSSGNLRLAGVIPLGGIDAQYERGQFYPGVFQFGLELAAHGVPRGLMPLPIAVLTARAKELLFALELDMEHPVSVAYRQCGAENGMEGWGLGPILYGSVKEWICWTRKSRRKVKNFRRLMELDGRNAIARGYMTE--YVFIGDTGEGDFKAGIKMCENFPRELRALFLHMVYCVDDVCKVP--EDYAVNGVPVLFFKTYVGAARKAYEAGLLNRYAVERVIAKAVEELEYSGAPRTSSKWSDLEADIEAA 259          
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A835YPL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL0_9STRA)

HSP 1 Score: 271 bits (693), Expect = 2.970e-82
Identity = 147/259 (56.76%), Postives = 177/259 (68.34%), Query Frame = 1
Query:  406 VVTDIDDTVKSSGNKRLFG-VPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVII-AAMEA-MTKVPRQSSKWEDINRDLMMA 1173
            VVTDIDDTVKSSGN RL G +PLGGIDAQY RG FYPGVFQF+LEL+ +G P    PL VAVLTARA+EFLFALE+   H ++  +RQCG  NG   WG GPVLYGSVKEW+  +RK  RK +NF  L+E DG     R    +  YIFIGDTGEGD +AG  M    P  +RA+F+H VS  S+      P D  +NGVPV++F+TYVGAA KA E GLMDK G++ VI  + ME  ++  PR  SKWED+  D+  A
Sbjct:   38 VVTDIDDTVKSSGNLRLAGLIPLGGIDAQYERGQFYPGVFQFALELAAHGTPQGLLPLPVAVLTARAKEFLFALELKTEHPVSIAYRQCGTDNGFDGWGLGPVLYGSVKEWIVWTRKGRRKFKNFKRLMEIDGTHAAARGCATD--YIFIGDTGEGDTKAGVKMCETFPRELRAMFMHAVSCDSEY--CITPDDYTINGVPVLFFKTYVGAARKAYEAGLMDKAGVQRVIDRSVMELELSGAPRDCSKWEDMEMDIEQA 292          
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A7S4CYL7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CYL7_9EUGL)

HSP 1 Score: 261 bits (667), Expect = 5.780e-76
Identity = 137/263 (52.09%), Postives = 176/263 (66.92%), Query Frame = 1
Query:  400 VRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQS----SKWEDINRDLMMAQ 1176
            ++V+TDIDDTVKSSG  +  G+PLGGID QYRRG+FYPGVF+F LEL+ Y     + PLSVAVLTARAREFLFALE+ ++H I + FR  G  +G + WG G VLYGSV+EWV   RKS RK  NF  LL          P  A   ++F+GDTGE D  AGEIM  + P  M+A+FLHVV+        P+P D+++NG PVV+FRTYVGAA KAV+ GL+   GL  V+ AA   + ++  +S    S+W D+NRD+ + Q
Sbjct:  215 LQVITDIDDTVKSSGGVKFGGIPLGGIDTQYRRGLFYPGVFRFMLELASYATT--EAPLSVAVLTARAREFLFALELDESHAICKAFRDTGRASGHEDWGIGEVLYGSVQEWVCQGRKSWRKVENFKLLLSS-------LPPDAARRFVFVGDTGELDQEAGEIMLEEFPSCMQALFLHVVAPDPALVPAPLPRDKLINGAPVVFFRTYVGAARKAVKYGLLGVDGLAAVVEAARADLERIEPESAGGSSRWADLNRDIALCQ 468          
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: W7UBU9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBU9_9STRA)

HSP 1 Score: 251 bits (642), Expect = 3.240e-73
Identity = 130/236 (55.08%), Postives = 163/236 (69.07%), Query Frame = 1
Query:  400 VRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAME 1107
            ++V+TDIDDTVKSSG  RL G+ LGGID QY+RG +YPG FQF+LELSR+GVP  +EP  VAVLTARAREF FALE+  +H++ R +   G  NG++ WG G VLYGSVKEWV  SRK  RK RNF  L   D      R    +  Y+F+GDTGE D +AGE M  K+P R++A+F+H VS+   +   P P DR +  VPV+YFRTYVGAA KA ELGL+   G+E V+   +E
Sbjct:  106 LQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQD------RLDRTD--YVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSES--RPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLE 331          
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A7S0UKK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKK8_9STRA)

HSP 1 Score: 248 bits (632), Expect = 4.360e-73
Identity = 130/262 (49.62%), Postives = 172/262 (65.65%), Query Frame = 1
Query:  388 NPKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMA 1173
            N +  +V++D+DDT+KSSG   + GV LGGID QY RG FYPGV +F L LS+ G+     P ++A+LTARA EF  ALEI +  ++    R  GE+ GI  WG GPVLYGSV EW+   RK  RK  NF  L+E D       P+G    YI++GDTGE D  AGE M  ++P+ M+AVFLHVV+D   +G   +P  +++NG PV++FRTYVGAA  AV+LGLM   GL++VI AA E ++ VP  S KW+DI +D+  A
Sbjct:   50 NLRFTQVISDVDDTLKSSGGVSVGGVALGGIDVQYDRGDFYPGVGEFMLALSQCGLTEEVNPANIAILTARAEEFKAALEIKEGSKLAVALRSAGEKVGINGWGVGPVLYGSVAEWIAQDRKGLRKFTNFERLIEQD-------PTGTIFQYIYVGDTGELDQEAGETMLREYPEVMKAVFLHVVTD-DVEGPPLIPPPKLINGHPVIFFRTYVGAAIDAVQLGLMSLDGLQSVIEAATEKLSDVPENSDKWKDIRKDMARA 303          
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A7S3A3W7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3W7_9RHOD)

HSP 1 Score: 247 bits (631), Expect = 4.240e-72
Identity = 130/260 (50.00%), Postives = 172/260 (66.15%), Query Frame = 1
Query:  391 PKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVP--RQSSKWEDINRDL 1164
            P+R++V+TDIDDTVKSSG  R+ G  LGGID+QY+RG  YPGVFQF+LE++  G+P   EPL +AVLTARARE  FAL + + H I R++R CG   G   WG GPVLYGSVKEW+F S+K  RK RNF  LL +      G   G +  YI++GDTGE D  AG++M  K+P  M+AVFLHVV +      +    D  V  VPV++FRTYVGAA KAVE G++ +  +  V   A++ + ++     SSKW D+ +D+
Sbjct:  100 PERIQVITDIDDTVKSSGGLRVAGQYLGGIDSQYKRGDCYPGVFQFALEIATSGLPEDVEPLPMAVLTARARELKFALALEEHHPICRKYRYCGMERGFDDWGIGPVLYGSVKEWLFQSKKGVRKFRNF-QLLHNYNASNCGVGIGCQTKYIYVGDTGELDLHAGKLMLQKYPSEMKAVFLHVVYNERDDPALKSYEDTHVKNVPVLFFRTYVGAARKAVEHGIISEAAMRRVAAKALKELLRIEPDHSSSKWVDLRKDI 358          
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A1E7FEW2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW2_9STRA)

HSP 1 Score: 245 bits (626), Expect = 4.930e-72
Identity = 135/281 (48.04%), Postives = 183/281 (65.12%), Query Frame = 1
Query:  358 SAVRLFTVSINPKRV----RVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQE--PLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVP--VPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMAQ 1176
            ++  L +VSI+  R     +V++D+DDT+KSSG   + GV LGGID QY RG FYPGV +F L+LS Y +       P ++A+LTARA EF  ALEI D  +++   R  GE+ GI+ WG GPVLYGSV EW+   RK  RK  NF  L++ D       P+G    YI++GD GE D  AGE M  ++P+ ++AVFLHVV+D   Q  VP  +P  + +NG P+V+FRTYVGAA  AV+LGLM+  GL++VI AA+E ++ VP  S KW+DI +DL  A+
Sbjct:   44 TSTELRSVSIDTTRTHRFTQVISDVDDTLKSSGGVNVGGVALGGIDVQYGRGDFYPGVAEFMLQLSLYKLLQQDSNYPANIAILTARAEEFKAALEIKDGSKLSIALRSAGEKAGIEGWGVGPVLYGSVAEWIIQDRKGLRKFTNFERLMQQD-------PAGVIFQYIYVGDVGELDQEAGETMVREYPEVVKAVFLHVVTD---QADVPPIIPAPKFINGRPIVFFRTYVGAAVDAVQLGLMNLDGLQSVINAAIEKLSDVPETSDKWKDIRKDLSRAE 314          
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A6V2PZW2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PZW2_9STRA)

HSP 1 Score: 245 bits (626), Expect = 6.490e-72
Identity = 138/279 (49.46%), Postives = 179/279 (64.16%), Query Frame = 1
Query:  403 RVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGV---PSWQE-----------PLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMA-QTAETQL 1194
            +V++D+DDT+KSSG   + GV LGGID QY RG FYPGVFQF LELS + +   P+  E           P  VAVLTARA EF  ALE+    ++ + FR+ GE+ GI+ WG GPVLYGSV EWV   RK  RK  NF  L+E D       P+G    Y+++GDTGE D  AGE M  ++P+ ++AVFLHVVSD     ++P P  +++NG P+V+FRTYVGAA KAV+LGLM ++GL  VI+ A  A+  VPR + KW D+ RD+  A QT    L
Sbjct:   62 QVISDVDDTLKSSGGVNVAGVALGGIDVQYERGDFYPGVFQFMLELSMHKLGEGPNESEGDDTGEEDRLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIEDWGLGPVLYGSVAEWVIQDRKGLRKFSNFERLIEQD-------PTGTIMQYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVSDAPFP-RIPPP--KLINGRPIVFFRTYVGAAAKAVQLGLMYEEGLMRVIVEAEAALEGVPRSNEKWLDLERDISEAYQTLSADL 330          
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A1Z5KGY8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGY8_FISSO)

HSP 1 Score: 239 bits (611), Expect = 1.960e-70
Identity = 126/257 (49.03%), Postives = 169/257 (65.76%), Query Frame = 1
Query:  403 RVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMA 1173
            +V++D+DDT+KSSG   + GV LGG+D QY RGV YPGV +F  +LS   V +   P  VA+LTARA EF  ALE+  +  + R+F Q GER G+  WG GPVLYGSV EWV   RK  RK  NF  LL+ D       P+G    Y+++GDTGE D +A E M  ++P+ ++AVFLHVVS   + G V +P  +++NG PV++FRTYVGAA  AVELGLM ++GL  VI A++ ++   PR S KW+D+  D+  A
Sbjct:   28 QVISDVDDTLKSSGGLNVAGVALGGVDVQYERGVVYPGVAEFMFQLSSNNVAT---PAKVAILTARAEEFKAALELKASSSLARKFAQAGERAGVSGWGIGPVLYGSVAEWVIQDRKGLRKFTNFERLLQQD-------PTGEVLRYVYVGDTGELDQQAAETMLREYPEIVQAVFLHVVS--GELGDVFIPPPKLINGRPVIFFRTYVGAALAAVELGLMPREGLVQVIDASVLSLADEPRSSDKWKDLEVDMERA 272          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7V3_ECTSI3.870e-26593.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMG4_9STRA6.710e-8356.32Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YPL0_9STRA2.970e-8256.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4CYL7_9EUGL5.780e-7652.09Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
W7UBU9_9STRA3.240e-7355.08Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S0UKK8_9STRA4.360e-7349.62Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S3A3W7_9RHOD4.240e-7250.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1E7FEW2_9STRA4.930e-7248.04Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A6V2PZW2_9STRA6.490e-7249.46Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Z5KGY8_FISSO1.960e-7049.03Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1137contigEcto-sp13_S_contig1137:11877..17157 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score743.0
Seed ortholog evalue7.2e-212
Seed eggNOG ortholog2880.D7G7V3
Model size2045
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs2AJYC@1,2RZ89@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_000190.1
Cds size1212
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1137.1205.1prot_Ecto-sp13_S_contig1137.1205.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1137 12596..17043 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462595.1615057-UTR-Ecto-sp13_S_contig1137:11876..125951681462595.1615057-UTR-Ecto-sp13_S_contig1137:11876..12595Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1137 11877..12595 -
1681462595.2168086-UTR-Ecto-sp13_S_contig1137:17043..171571681462595.2168086-UTR-Ecto-sp13_S_contig1137:17043..17157Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1137 17044..17157 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462595.1759849-CDS-Ecto-sp13_S_contig1137:12595..128141681462595.1759849-CDS-Ecto-sp13_S_contig1137:12595..12814Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1137 12596..12814 -
1681462595.1869087-CDS-Ecto-sp13_S_contig1137:13856..144731681462595.1869087-CDS-Ecto-sp13_S_contig1137:13856..14473Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1137 13857..14473 -
1681462595.1983085-CDS-Ecto-sp13_S_contig1137:15634..156741681462595.1983085-CDS-Ecto-sp13_S_contig1137:15634..15674Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1137 15635..15674 -
1681462595.2082171-CDS-Ecto-sp13_S_contig1137:16707..170431681462595.2082171-CDS-Ecto-sp13_S_contig1137:16707..17043Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1137 16708..17043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1137.1205.1

>prot_Ecto-sp13_S_contig1137.1205.1 ID=prot_Ecto-sp13_S_contig1137.1205.1|Name=mRNA_Ecto-sp13_S_contig1137.1205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp
MRYDARWLTGTACLVASPRAFRPLSQPCCFRRHLNGDKRSISSTSCGITS
NVGRERLQPLQRAASMLGMEAGLGVAGLSALSAVRLFTVSINPKRVRVVT
DIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSW
QEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVL
YGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTG
EGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVY
FRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDL
MMAQTAETQLPSIGVETLTSALEDALGSKINAKRNGAARRRLSVTTAATK
RRP*
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mRNA from alignment at Ecto-sp13_S_contig1137:11877..17157-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1137.1205.1 ID=mRNA_Ecto-sp13_S_contig1137.1205.1|Name=mRNA_Ecto-sp13_S_contig1137.1205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1137:11877..17157- (Ectocarpus species13 EcNAP12_S_4_19m)
GACTCGCCATCAGGCATGATGGCGCACACCACATAACCTGCAGACCAGGC CGACCCATCGCCGCCCCAGCCAGGCTGTGTGTCAGGCGCAGCACTGCGTG CGACTCCGACGGGTATGCGCTATGATGCCCGGTGGTTGACCGGGACTGCT TGCCTCGTGGCATCTCCAAGAGCCTTCCGGCCATTGAGTCAACCGTGCTG TTTCCGACGGCACCTCAACGGCGACAAAAGGAGCATCTCTTCCACATCAT GTGGCATCACCAGCAATGTCGGCCGGGAGAGGTTGCAGCCGTTGCAACGA GCCGCTTCCATGCTTGGGATGGAAGCCGGGCTTGGTGTGGCAGGTCTCAG CGCTCTGAGCGCTGTGCGTCTCTTCACTGTGAGCATCAACCCCAAGCGCG TGCGCGTGGTGACGGACATCGATGATACCGTCAAATCGTCGGGGAACAAG GTTAGTTGTGAAACAGCAGTAGACTATTACGTACCTGCGTACGTGTCACC ATCGATGTCTTGTCTTTTCGTCAAGGTTTGGTGCCCGAAAGGCTATTCCG TGCGGGTGCGCTCAGGTCCAATCAGGGCAAGCTATATTTGGTCCTGCTAT GCACTGCAGTGCCAACGAGCAAACGAACGCTAATTGCGTAAGTCTAGGGC AGCAGCATACGCTGTGGAAGTACCGAAGGTTGCGAGTCTGCGCACAGGGG TGCGAGCTATTTGCAAAGCGTAATTTCTCCAAAAGCAGGAGGTTAATGTC GTATACGGCGGTTTTGGAAACATCTCATCGAGAGCTTTCCTAAGAAATAT CAGTTGGCGCCCGCACTTTTCTGGTTGTGTATGGGTCTGTACATGGCGTT GGAGTGGGTTCCAGTCCCGCCCAGAGAGAGATGACCCACTAATGAAATAC TGTACGAACAGCGGGGTTTCCGTGCAGTGTACGCTACACCTGGTGTGTTG CTCGGTAGGCGTTTCTAGTGGGTGAGAAGAGAGACAGATAAGTCACGCAG ACAGCGTGGGCGTGCTGCGATCCACATTGCATACAATACGTGAAGGGCAA AATACCATGGGTTGCGTAAGATACCTTTTCTGCTGTACATCGCACATCCC AGATCCCCAGGGTTTATTTGATTTTTCTGCTGTAGTGACGATGCCGAAAC ACCCGCATTGGTAACGGCCTCGTCGAGAGCAAGACATATCCTCGATTTTG GCATCCTCGTTATCGTGAAGTAGTCGAGCTTTGAAACGCCCACCAGCTTG TGGTGGTTCTTGTGCAGCCTGCAGCCTATGGCACACCGTGTCGTCCTCCA ATGTAGACCAAGACTCATTTATCTGTTGTTGATACCACCACAAGCTGAAA TCTTGAGTGCCTGTTACGTTGGGTCATTGCGCCCTCAACGTGTCAACGCG TCCGCTCTTTACCGCTTCCCTCTTTTGCCTCTCGCGTGTTCTACGTACCA TCGCCTATCGTCGATCATTGTGTCCCTCTTAAGCGCTTATTCGGGGTACC GCTGGGAGGGATCGACGCTCAATGTGAGATGCTAGATGTTTGAGTCATGT ACAAGCTACTTTTGAGTGACTGGCGCACACCATCATACAGTAGTATAATA GTGCGTCATTGCGAATATCCTCTGTCCGGGTTCGGCACCATGCCCACAGC CGTTGAGCATGATGTACCCCCATGTCCGTTCGTCGGGTTGATGTCATTTC TACGAGCGAGTTGCCCGGATTGCAGGACTACGCGATACGCGATACCATGT GTGGAGTGTTGGTCTCGAGGCCCTCCTCTGAACTTCACGAAGCGTGAATA TGTGCATCTTGTGTGGTTCCTACATCATTAGTATTGACGAATGGGCACCC TACTGCTGTACGCGATTATTGGCATGCATGTCCTCGACACCGGCAAGAGC GAAGCCGGTACGCAGCTTCTGCTTATCGCACTCGCGATGGTGCGAAAGTG TCGGACAATGTGGAGAGGAGGGAGCAAAGAGTGTGGGGGTTTGGTTCTGT TTGGGGGGCGGGGGGGATTGTTTTCATGCCTCGCCTTGGAGCTGGGTATA TTGTTTGGTTGAGACCCGACCGTGTTTGCTAGGATACGCTTTTAGCGCGA CGAAAAGCTGTGGTTTGAAAGTGAATCAAGCAACATAGCACCGTCTGTAT AAGGCGACATGGAGAGCTCACGTAGCCCGTGTGCGGCAGCGTGAGCTTTG GTTCTGAAAGGGGCCTGCTATTCCCTGGGTTGGACTTGGAGCGTGGCAGT TCTATGGCCTGGTTGGTCGAATGTTGACGTCTACTCTGTCTTCATGTACG CACTTGTTGACCATCTGTCACAGCATGATGTGTCCTCCCCTAAAAAGATC GCACCGCGCTGATCGCTCGAATTTATTGCATCGGTGGGCGTTTTCGATAT GTGAAACTTAAGGATGGATGTCTTGAAAAAGTGCTGTTCCCGTGAAACCC CCCCAATGCATCTGCAACTGTCGGGCGCTGCGCGACCTTTTATTCGCCTC CTTGCTGGCCGTAGCCCATGCAAAGCACCGCCTAGAATTTCCTGTGGTGC AGCATCTGCAGCAACACCCTGTGCTGTTCATCATTGTTGGTGTACCACCG TGCTACAGAGTTTGTCCCGCTTTCACCCTAACGAACGTGTTTGGCGCATA ACTCCCGCCTCGTTCCTGAATCCAACGGGCGCAGACCGCAGGGGAGTTTT TTATCCTGGGGTGTTCCAGTTCTCCCTGGAGCTGTCGCGATATGGCGTGC CTTCCTGGCAAGAACCCCTGTCGGTGGCTGTGCTAACAGCACGAGCTAGA GAGTTTTTGTTCGCGTTAGAAATCGGCGACACGCACGAAATAACGAGGGA GTTCCGCCAGTGCGGGGAGCGCAACGGAATCAAGAAGTGGGGGCGAGGCC CTGTGCTCTACGGCAGCGTGAAGGAATGGGTTTTTCCTAGCCGAAAGAGC GAGAGGAAGGCCAGAAATTTCGGTTTTTTGCTGGAGGACGATGGGCAGGG GGGTCGTGGCAGGCCGAGCGGGGCCGAGGGTGGCTACATTTTCATCGGGG ATACCGGAGAAGGAGACCCCCGCGCGGGAGAGATCATGAGCGCCAAGCAT CCGGACCGGATGCGAGCGGTGTTCCTTCACGTGGTGAGCGATGGGTCCCA ACAGGGGAAGGTACCCGTGCCGACGGATCGGGTGGTGAACGGGGTGCCTG TGGTGTACTTCCGAACCTACGTCGGTGCAGCGTTCAAGGCCGTGGAGCTC GGGCTGATGGACAAGAAGGGGCTAGAAAACGTCATCATCGCAGCAATGGA GGTGGGTTAGATTGTTCAGAAAACGTTTCCTCTCGATGTCGTCTTCAAGA ATCACCAGGTTGAAATCTCGAAAACCATGAGGCCGGTAGGATCAGGACTT TCATTCCTCGGCGAGGCGTGCATGTTCGCACTAAGTACGTAGTACGGAGA GGGCTTGTTCCTGGGTAAGCAGAGGGAGGAGCGGCTAAATCCTTCTCACG TGAGTTTAAGAAGCACCGCGGAGAAGTTCTTGTGTGTGTGAATTTGGGTC CGGGGTCTGCAGTTGTAGAGAGGCAGAAGGCGCCAGGGTACTTAGAGGCA GACTGTGAGCGGCCCTAAGAAATGCCGAGGGAACAAGAATACATCCTTGG TGAAGACCTGGCCTCCTTCGGTAGGCGACGTGGCTCAACTCAGTTTTACC AAGGTGGTGGTGTAGTGGTGGATTGACCCGCTGTCGAGGGAAGGCAAGGC AAGGCAAGGCTTCTTCCGTGAGAATTACAGTAGGCATGGAGACAGGCCAG AAAGAGAGCTGGTCGAGCGGGCAATTGACGGGGGTCAGTATATACACCAA CAGGTGGGAATTGGACGAGCAGGCACCCGCCAGAGGTGTCCCGACCAGTG GTGTCCCGACCTCTCCTGGTTAGTCGGAATGTTCTATGGACATTCTCTTG CCATCCCGTTGAGTTTGTCGAGTATGGATATCGCCATCTCATATGCCATG GTATAGCTCGTCCATGTTGATTCTTCTGCGCTTGGTAGCACTTGGATGGT TGCAACTTTGGAGATGGCCGGGCTGCCGGCGGATAGCATGTGCGGTGCAG GCTGAACATGACGTCTGCGCCGCGTCAATGTTTTTGTCTCCTCTCTTCAG CAATGGTGTTGGTTGGTGTCAGGAGAAAAAGAGGTGTTGGTTCTGTGGGG AAAACATCGCGCCTACGAAAGCCCCACCGCCTAGATCCGCCCTTGCTGCT AGCATCCCTTGTCCTGCAGCGCTTTTTCTCATCTTTCGTGACCATGGAGA GTCCAATCATTGTCGTTGTCCCTGTGCCCCCATGCATGTGTAGGCTATGA CCAAGGTGCCCCGACAATCCTCGAAGTGGGAAGACATCAATCGTGATCTC ATGATGGCGCAGACGGCAGAGACCCAGCTGCCTTCCATAGGAGTGGAAAC TCTCACCTCAGCGCTAGAAGATGCGTTGGGGTCGAAAATAAACGCGAAGC GGAACGGTGCTGCTAGACGGCGACTCTCTGTTACCACGGCAGCTACGAAG AGACGACCGTAATGATCCATACATCTTGAGAGACGATAAATGTATGCTGT TGATATTTCGAGGCACATTATTTTTGATACGTAGCAAACCGGGGAAGACA GTTGGTCTAGCTGTGTGATAGGTTCCTGGATGGCGCGGGTGTGTTGATAG TTGGGCTTCTTCGGTGCCGTTTCGGTGAGAACTGTTCGTGATTCTCGTGA AGGAAGAGAAGCCGTCTGTTTGATACTGTAACAGTCGTGTTGGCAAGAAT GATCAATTGCTGTAGGTCCTTCATGTCCCGTGCGAGTTGGCAGCTGCTGT GCCATTCTGTGGATATTGTTCCGTCCCTTTGTTTCTATTTACACGAATTT CAGCATGATTCAGTACCTCGCGCGTGCCTTGCTTATCCTGCTGCTTCGGC GCGTGGTCTTGCTCAATACAGTTGATGAGCAACGTCGTTCAAAGTACCAT TTGCGTGTGTACATGCTTGACGGGGGCTTTGTAGTGCGGCTGTCGATGAT CCAATCCTTGATACGTTCAAGGACAAGGGATTATCGGTATTGTACGTAGA CGGTGTACCTCGGCGGTTGGACTTAGCTTTCTTCGCTTCGTCGCCCCGCG CGAGAGTGCATGCTGGTGGGCACAACTCGTTATGCAGCGGCAGTCGCAGC AAAGCACTGTCAAGGTGTGGTTTGTCCTAGCAGTTACGTTGTATATCTTC TTCCGACTCCTGCACCGATGATCGTGCCGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1137:11877..17157-

>mRNA_Ecto-sp13_S_contig1137.1205.1 ID=mRNA_Ecto-sp13_S_contig1137.1205.1|Name=mRNA_Ecto-sp13_S_contig1137.1205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1137:11877..17157- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCTATGATGCCCGGTGGTTGACCGGGACTGCTTGCCTCGTGGCATC
TCCAAGAGCCTTCCGGCCATTGAGTCAACCGTGCTGTTTCCGACGGCACC
TCAACGGCGACAAAAGGAGCATCTCTTCCACATCATGTGGCATCACCAGC
AATGTCGGCCGGGAGAGGTTGCAGCCGTTGCAACGAGCCGCTTCCATGCT
TGGGATGGAAGCCGGGCTTGGTGTGGCAGGTCTCAGCGCTCTGAGCGCTG
TGCGTCTCTTCACTGTGAGCATCAACCCCAAGCGCGTGCGCGTGGTGACG
GACATCGATGATACCGTCAAATCGTCGGGGAACAAGCGCTTATTCGGGGT
ACCGCTGGGAGGGATCGACGCTCAATACCGCAGGGGAGTTTTTTATCCTG
GGGTGTTCCAGTTCTCCCTGGAGCTGTCGCGATATGGCGTGCCTTCCTGG
CAAGAACCCCTGTCGGTGGCTGTGCTAACAGCACGAGCTAGAGAGTTTTT
GTTCGCGTTAGAAATCGGCGACACGCACGAAATAACGAGGGAGTTCCGCC
AGTGCGGGGAGCGCAACGGAATCAAGAAGTGGGGGCGAGGCCCTGTGCTC
TACGGCAGCGTGAAGGAATGGGTTTTTCCTAGCCGAAAGAGCGAGAGGAA
GGCCAGAAATTTCGGTTTTTTGCTGGAGGACGATGGGCAGGGGGGTCGTG
GCAGGCCGAGCGGGGCCGAGGGTGGCTACATTTTCATCGGGGATACCGGA
GAAGGAGACCCCCGCGCGGGAGAGATCATGAGCGCCAAGCATCCGGACCG
GATGCGAGCGGTGTTCCTTCACGTGGTGAGCGATGGGTCCCAACAGGGGA
AGGTACCCGTGCCGACGGATCGGGTGGTGAACGGGGTGCCTGTGGTGTAC
TTCCGAACCTACGTCGGTGCAGCGTTCAAGGCCGTGGAGCTCGGGCTGAT
GGACAAGAAGGGGCTAGAAAACGTCATCATCGCAGCAATGGAGGCTATGA
CCAAGGTGCCCCGACAATCCTCGAAGTGGGAAGACATCAATCGTGATCTC
ATGATGGCGCAGACGGCAGAGACCCAGCTGCCTTCCATAGGAGTGGAAAC
TCTCACCTCAGCGCTAGAAGATGCGTTGGGGTCGAAAATAAACGCGAAGC
GGAACGGTGCTGCTAGACGGCGACTCTCTGTTACCACGGCAGCTACGAAG
AGACGACCGTAA
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