mRNA_Ecto-sp13_S_contig1137.1205.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: D7G7V3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V3_ECTSI) HSP 1 Score: 743 bits (1917), Expect = 3.870e-265 Identity = 376/403 (93.30%), Postives = 384/403 (95.29%), Query Frame = 1
Query: 115 MRYDARWLTGTACLVASPRAFRPLSQPCCFRRHLNGDKRSISSTSCGITSNVGRERLQPLQRAASMLGMEAGLGVAGLSALSAVRLFTVSINPKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMAQTAETQLPSIGVETLTSALEDALGSKINAKRNGAARRRLSVTTAATKRRP 1323
MRYDARWLTGTACLVASPRAFRPLSQPCCFRR+LNGDK SISSTSC T NVGRERLQPLQRAASMLGM+AGLGVAGLSALSAVRLFT SI PKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRY VPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWV PSRKSERKARNFGFLLEDD +GGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSA+HPDRMRAVFLHVVSDG QQGKVPVP DRVVN VPVVYFRTYVGAA KAVELGLMDKKGLENVI AA EAMTKVPRQSSKWEDINRDLMMAQT+ETQLPSIGV+TLTSAL+DALGSKIN KRNGA RRR VTTAATK+RP
Sbjct: 1 MRYDARWLTGTACLVASPRAFRPLSQPCCFRRYLNGDKWSISSTSCSSTGNVGRERLQPLQRAASMLGMDAGLGVAGLSALSAVRLFTASITPKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYRVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVCPSRKSERKARNFGFLLEDDEKGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAEHPDRMRAVFLHVVSDGPQQGKVPVPMDRVVNAVPVVYFRTYVGAAVKAVELGLMDKKGLENVITAAKEAMTKVPRQSSKWEDINRDLMMAQTSETQLPSIGVKTLTSALDDALGSKINTKRNGAVRRRPPVTTAATKKRP 403
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A835YMG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG4_9STRA) HSP 1 Score: 271 bits (694), Expect = 6.710e-83 Identity = 147/261 (56.32%), Postives = 181/261 (69.35%), Query Frame = 1
Query: 400 VRVVTDIDDTVKSSGNKRLFGV-PLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAM--TKVPRQSSKWEDINRDLMMA 1173
+RVVTDIDDTVKSSGN RL GV PLGGIDAQY RG FYPGVFQF LEL+ +GVP PL +AVLTARA+E LFALE+ H ++ +RQCG NG++ WG GP+LYGSVKEW+ +RKS RK +NF L+E DG+ R E Y+FIGDTGEGD +AG M P +RA+FLH+V KVP D VNGVPV++F+TYVGAA KA E GL+++ +E VI A+E + + PR SSKW D+ D+ A
Sbjct: 3 LRVVTDIDDTVKSSGNLRLAGVIPLGGIDAQYERGQFYPGVFQFGLELAAHGVPRGLMPLPIAVLTARAKELLFALELDMEHPVSVAYRQCGAENGMEGWGLGPILYGSVKEWICWTRKSRRKVKNFRRLMELDGRNAIARGYMTE--YVFIGDTGEGDFKAGIKMCENFPRELRALFLHMVYCVDDVCKVP--EDYAVNGVPVLFFKTYVGAARKAYEAGLLNRYAVERVIAKAVEELEYSGAPRTSSKWSDLEADIEAA 259
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A835YPL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL0_9STRA) HSP 1 Score: 271 bits (693), Expect = 2.970e-82 Identity = 147/259 (56.76%), Postives = 177/259 (68.34%), Query Frame = 1
Query: 406 VVTDIDDTVKSSGNKRLFG-VPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVII-AAMEA-MTKVPRQSSKWEDINRDLMMA 1173
VVTDIDDTVKSSGN RL G +PLGGIDAQY RG FYPGVFQF+LEL+ +G P PL VAVLTARA+EFLFALE+ H ++ +RQCG NG WG GPVLYGSVKEW+ +RK RK +NF L+E DG R + YIFIGDTGEGD +AG M P +RA+F+H VS S+ P D +NGVPV++F+TYVGAA KA E GLMDK G++ VI + ME ++ PR SKWED+ D+ A
Sbjct: 38 VVTDIDDTVKSSGNLRLAGLIPLGGIDAQYERGQFYPGVFQFALELAAHGTPQGLLPLPVAVLTARAKEFLFALELKTEHPVSIAYRQCGTDNGFDGWGLGPVLYGSVKEWIVWTRKGRRKFKNFKRLMEIDGTHAAARGCATD--YIFIGDTGEGDTKAGVKMCETFPRELRAMFMHAVSCDSEY--CITPDDYTINGVPVLFFKTYVGAARKAYEAGLMDKAGVQRVIDRSVMELELSGAPRDCSKWEDMEMDIEQA 292
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A7S4CYL7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CYL7_9EUGL) HSP 1 Score: 261 bits (667), Expect = 5.780e-76 Identity = 137/263 (52.09%), Postives = 176/263 (66.92%), Query Frame = 1
Query: 400 VRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQS----SKWEDINRDLMMAQ 1176
++V+TDIDDTVKSSG + G+PLGGID QYRRG+FYPGVF+F LEL+ Y + PLSVAVLTARAREFLFALE+ ++H I + FR G +G + WG G VLYGSV+EWV RKS RK NF LL P A ++F+GDTGE D AGEIM + P M+A+FLHVV+ P+P D+++NG PVV+FRTYVGAA KAV+ GL+ GL V+ AA + ++ +S S+W D+NRD+ + Q
Sbjct: 215 LQVITDIDDTVKSSGGVKFGGIPLGGIDTQYRRGLFYPGVFRFMLELASYATT--EAPLSVAVLTARAREFLFALELDESHAICKAFRDTGRASGHEDWGIGEVLYGSVQEWVCQGRKSWRKVENFKLLLSS-------LPPDAARRFVFVGDTGELDQEAGEIMLEEFPSCMQALFLHVVAPDPALVPAPLPRDKLINGAPVVFFRTYVGAARKAVKYGLLGVDGLAAVVEAARADLERIEPESAGGSSRWADLNRDIALCQ 468
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: W7UBU9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBU9_9STRA) HSP 1 Score: 251 bits (642), Expect = 3.240e-73 Identity = 130/236 (55.08%), Postives = 163/236 (69.07%), Query Frame = 1
Query: 400 VRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAME 1107
++V+TDIDDTVKSSG RL G+ LGGID QY+RG +YPG FQF+LELSR+GVP +EP VAVLTARAREF FALE+ +H++ R + G NG++ WG G VLYGSVKEWV SRK RK RNF L D R + Y+F+GDTGE D +AGE M K+P R++A+F+H VS+ + P P DR + VPV+YFRTYVGAA KA ELGL+ G+E V+ +E
Sbjct: 106 LQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQD------RLDRTD--YVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSES--RPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLE 331
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A7S0UKK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKK8_9STRA) HSP 1 Score: 248 bits (632), Expect = 4.360e-73 Identity = 130/262 (49.62%), Postives = 172/262 (65.65%), Query Frame = 1
Query: 388 NPKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMA 1173
N + +V++D+DDT+KSSG + GV LGGID QY RG FYPGV +F L LS+ G+ P ++A+LTARA EF ALEI + ++ R GE+ GI WG GPVLYGSV EW+ RK RK NF L+E D P+G YI++GDTGE D AGE M ++P+ M+AVFLHVV+D +G +P +++NG PV++FRTYVGAA AV+LGLM GL++VI AA E ++ VP S KW+DI +D+ A
Sbjct: 50 NLRFTQVISDVDDTLKSSGGVSVGGVALGGIDVQYDRGDFYPGVGEFMLALSQCGLTEEVNPANIAILTARAEEFKAALEIKEGSKLAVALRSAGEKVGINGWGVGPVLYGSVAEWIAQDRKGLRKFTNFERLIEQD-------PTGTIFQYIYVGDTGELDQEAGETMLREYPEVMKAVFLHVVTD-DVEGPPLIPPPKLINGHPVIFFRTYVGAAIDAVQLGLMSLDGLQSVIEAATEKLSDVPENSDKWKDIRKDMARA 303
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A7S3A3W7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3W7_9RHOD) HSP 1 Score: 247 bits (631), Expect = 4.240e-72 Identity = 130/260 (50.00%), Postives = 172/260 (66.15%), Query Frame = 1
Query: 391 PKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVP--RQSSKWEDINRDL 1164
P+R++V+TDIDDTVKSSG R+ G LGGID+QY+RG YPGVFQF+LE++ G+P EPL +AVLTARARE FAL + + H I R++R CG G WG GPVLYGSVKEW+F S+K RK RNF LL + G G + YI++GDTGE D AG++M K+P M+AVFLHVV + + D V VPV++FRTYVGAA KAVE G++ + + V A++ + ++ SSKW D+ +D+
Sbjct: 100 PERIQVITDIDDTVKSSGGLRVAGQYLGGIDSQYKRGDCYPGVFQFALEIATSGLPEDVEPLPMAVLTARARELKFALALEEHHPICRKYRYCGMERGFDDWGIGPVLYGSVKEWLFQSKKGVRKFRNF-QLLHNYNASNCGVGIGCQTKYIYVGDTGELDLHAGKLMLQKYPSEMKAVFLHVVYNERDDPALKSYEDTHVKNVPVLFFRTYVGAARKAVEHGIISEAAMRRVAAKALKELLRIEPDHSSSKWVDLRKDI 358
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A1E7FEW2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW2_9STRA) HSP 1 Score: 245 bits (626), Expect = 4.930e-72 Identity = 135/281 (48.04%), Postives = 183/281 (65.12%), Query Frame = 1
Query: 358 SAVRLFTVSINPKRV----RVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQE--PLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVP--VPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMAQ 1176
++ L +VSI+ R +V++D+DDT+KSSG + GV LGGID QY RG FYPGV +F L+LS Y + P ++A+LTARA EF ALEI D +++ R GE+ GI+ WG GPVLYGSV EW+ RK RK NF L++ D P+G YI++GD GE D AGE M ++P+ ++AVFLHVV+D Q VP +P + +NG P+V+FRTYVGAA AV+LGLM+ GL++VI AA+E ++ VP S KW+DI +DL A+
Sbjct: 44 TSTELRSVSIDTTRTHRFTQVISDVDDTLKSSGGVNVGGVALGGIDVQYGRGDFYPGVAEFMLQLSLYKLLQQDSNYPANIAILTARAEEFKAALEIKDGSKLSIALRSAGEKAGIEGWGVGPVLYGSVAEWIIQDRKGLRKFTNFERLMQQD-------PAGVIFQYIYVGDVGELDQEAGETMVREYPEVVKAVFLHVVTD---QADVPPIIPAPKFINGRPIVFFRTYVGAAVDAVQLGLMNLDGLQSVINAAIEKLSDVPETSDKWKDIRKDLSRAE 314
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A6V2PZW2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PZW2_9STRA) HSP 1 Score: 245 bits (626), Expect = 6.490e-72 Identity = 138/279 (49.46%), Postives = 179/279 (64.16%), Query Frame = 1
Query: 403 RVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGV---PSWQE-----------PLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMA-QTAETQL 1194
+V++D+DDT+KSSG + GV LGGID QY RG FYPGVFQF LELS + + P+ E P VAVLTARA EF ALE+ ++ + FR+ GE+ GI+ WG GPVLYGSV EWV RK RK NF L+E D P+G Y+++GDTGE D AGE M ++P+ ++AVFLHVVSD ++P P +++NG P+V+FRTYVGAA KAV+LGLM ++GL VI+ A A+ VPR + KW D+ RD+ A QT L
Sbjct: 62 QVISDVDDTLKSSGGVNVAGVALGGIDVQYERGDFYPGVFQFMLELSMHKLGEGPNESEGDDTGEEDRLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIEDWGLGPVLYGSVAEWVIQDRKGLRKFSNFERLIEQD-------PTGTIMQYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVSDAPFP-RIPPP--KLINGRPIVFFRTYVGAAAKAVQLGLMYEEGLMRVIVEAEAALEGVPRSNEKWLDLERDISEAYQTLSADL 330
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Match: A0A1Z5KGY8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGY8_FISSO) HSP 1 Score: 239 bits (611), Expect = 1.960e-70 Identity = 126/257 (49.03%), Postives = 169/257 (65.76%), Query Frame = 1
Query: 403 RVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYGVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVFPSRKSERKARNFGFLLEDDGQGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAKHPDRMRAVFLHVVSDGSQQGKVPVPTDRVVNGVPVVYFRTYVGAAFKAVELGLMDKKGLENVIIAAMEAMTKVPRQSSKWEDINRDLMMA 1173
+V++D+DDT+KSSG + GV LGG+D QY RGV YPGV +F +LS V + P VA+LTARA EF ALE+ + + R+F Q GER G+ WG GPVLYGSV EWV RK RK NF LL+ D P+G Y+++GDTGE D +A E M ++P+ ++AVFLHVVS + G V +P +++NG PV++FRTYVGAA AVELGLM ++GL VI A++ ++ PR S KW+D+ D+ A
Sbjct: 28 QVISDVDDTLKSSGGLNVAGVALGGVDVQYERGVVYPGVAEFMFQLSSNNVAT---PAKVAILTARAEEFKAALELKASSSLARKFAQAGERAGVSGWGIGPVLYGSVAEWVIQDRKGLRKFTNFERLLQQD-------PTGEVLRYVYVGDTGELDQQAAETMLREYPEIVQAVFLHVVS--GELGDVFIPPPKLINGRPVIFFRTYVGAALAAVELGLMPREGLVQVIDASVLSLADEPRSSDKWKDLEVDMERA 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1137.1205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1137.1205.1 >prot_Ecto-sp13_S_contig1137.1205.1 ID=prot_Ecto-sp13_S_contig1137.1205.1|Name=mRNA_Ecto-sp13_S_contig1137.1205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=404bp MRYDARWLTGTACLVASPRAFRPLSQPCCFRRHLNGDKRSISSTSCGITSback to top mRNA from alignment at Ecto-sp13_S_contig1137:11877..17157- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1137.1205.1 ID=mRNA_Ecto-sp13_S_contig1137.1205.1|Name=mRNA_Ecto-sp13_S_contig1137.1205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1137:11877..17157- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1137:11877..17157- >mRNA_Ecto-sp13_S_contig1137.1205.1 ID=mRNA_Ecto-sp13_S_contig1137.1205.1|Name=mRNA_Ecto-sp13_S_contig1137.1205.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1137:11877..17157- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |