mRNA_Ecto-sp13_S_contig1137.1202.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: D7G7V1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V1_ECTSI) HSP 1 Score: 601 bits (1550), Expect = 2.080e-213 Identity = 298/346 (86.13%), Postives = 301/346 (86.99%), Query Frame = 1
Query: 94 MTAGQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDK-----------------------------------------TVRAWDMRSRNRSPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGVLRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPGEPMLLTASYDGSAVLWAP 1008
MT GQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKE TTKA ELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDK TVRAWDMRSRNRSPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGG++RLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSE+GHVYIWDIVEGKVTRTLKHHRRPVCSMSYHP EPMLLTASYDGSAVLWAP
Sbjct: 1 MTVGQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEGTTKAGELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKGRGGVTLYNKICLRVYLVALQQSSHCCINFSPPTTHATRAQTVRAWDMRSRNRSPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGIVRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEDGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPSEPMLLTASYDGSAVLWAP 346
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: A0A7S2WCM2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCM2_9STRA) HSP 1 Score: 332 bits (850), Expect = 9.210e-108 Identity = 160/305 (52.46%), Postives = 215/305 (70.49%), Query Frame = 1
Query: 88 RRMTAGQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKTVRAWDMRSRNRSPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGVLRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPGEPMLLTASYDGSAVLW 1002
R + + +GP R++GDGKY + G D+T+RL+NP R D E + + E AL +K+Y GPH Y+++DV + DN++FVSCG D+AAFL+DV +G VVRR +GH QRINS F AE +VLFTASYD+TVR WD+RSRNR PIQ L KDS TSV + S E++ CVDG VR +DLR + D++ P+T A++SHDG C++ +CL + LLEKS GS LNTY GH+HK Y +ES ++TDAH++SGSE+G V IWD+VE VT+ L+ H+R V ++ HP E L+T SYDG+AV W
Sbjct: 11 RVLPSHRGPVARARWSGDGKYIITCGHDKTLRLWNPTRTD---ETSRPVDGCEVALEIKAYTGPHAYDIVDVGIFRDNAKFVSCGGDRAAFLFDVQSGHVVRRFEGHSQRINSVGFNAEDTVLFTASYDQTVRCWDLRSRNREPIQVLSDFKDSVTSVSS--SAHEIITSCVDGCVRIHDLRMGECNADNLGVPLTCATLSHDGKCIVASCLNSQIGLLEKSDGSVLNTYKGHIHKQYALESCFSHTDAHILSGSEDGTVLIWDLVEAGVTQRLEGHKRAVGGVAPHPKESKLVTCSYDGTAVYW 310
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: K8ZAG4_NANGC (Mitogen-activated protein kinase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAG4_NANGC) HSP 1 Score: 308 bits (789), Expect = 3.430e-98 Identity = 155/338 (45.86%), Postives = 210/338 (62.13%), Query Frame = 1
Query: 49 HYRSTMELPGAP--VRRMTAG-QGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKTVRAWDMRSRNRSPIQTLEGCKDSATSVCT---------APSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGVLRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEG--------KVTRTLKHHRRPVCSMSYHPGEPMLLTASYDGSAVLW 1002
H S + P P VRR G +GP + +RF G YC+ GQD++++L+NP R D A + +A+LV+++ GPHGYE+ DVA+ DN+RF SCG D A +LWDV+T VV++ GH INS F AEG+V+ + SYD+TV+ WD+RS NR PIQTL+ KDS T V G EV+ VDG +RTYD+R + DD P++ +VS DG C+L+ L GV+RLLE+S+G LN Y GH H++Y +ES NTDA V+SGSE+G +Y+WD+VEG K LK H+R + SMS+HP E +L+TA YDG W
Sbjct: 5 HQASRVPPPSLPTKVRRKLVGHRGPIYTIRFNEKGTYCMTGGQDKSIKLWNPFRPSAD------ANKAGEAMLVQTFTGPHGYEIRDVAITTDNARFASCGGDTAFYLWDVATARVVKKFSGHAHMINSVAFNAEGTVVLSGSYDRTVKIWDLRSNNRDPIQTLDDFKDSVTRVMVLEEGGRAGKGAGGKEVLATSVDGCLRTYDIRKGVMWMDDCKEPLSSVTVSGDGQCVLMNGLDGVVRLLERSTGEMLNNYQGHTHQAYPIESCFDNTDAFVLSGSEDGSLYVWDLVEGGSEGGKEGKPVAVLKEHKRALGSMSFHPSEAVLVTAGYDGVGCCW 336
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: A0A836CAS4_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAS4_9STRA) HSP 1 Score: 299 bits (766), Expect = 2.800e-94 Identity = 150/317 (47.32%), Postives = 199/317 (62.78%), Query Frame = 1
Query: 70 LPGAPVRRMTAGQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADP--------DKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKTVRAWDMRSRNRSPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGV-LRLLEKSS--------GSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPGEPMLL 969
LP P R AG+GP ++ R T DGKY L GQDRTVRL+NPH+ DP T E LE AL++K+Y G HG+E+ D+AV ADNS+ SCG D+AA +WDV+TGA+ R++ H+ +N+C A+ +VL T SYD+TVRAWD+R+ R+P+Q LEG +DS TS+ P G +V G VDG+VRTYD R A + EDD PVT + SHDG C+L +CLG LRLLE+ +QL Y GH H Y + + + D+HV+S SE+G V WD+V G V L+ H RP +++ HPG P L
Sbjct: 4 LPSKPTRVAKAGEGPLYIARLTADGKYLLTGGQDRTVRLWNPHKPDPAAXXXXXXXXXXATSDEPLEAALMIKAYGGGHGHEICDLAVAADNSKVASCGGDRAAVVWDVATGAL-RKLPAHDAAVNACAATADFAVLLTGSYDRTVRAWDLRAHGRAPVQVLEGARDSITSLLVLPCG-AIVAGSVDGRVRTYDARAAALIEDDCREPVTCVAASHDGKCVLASCLGSATLRLLERGGXXXXXXXXSAQLAAYRGHAHARYPLRTAFSADDSHVLSCSEDGDVVAWDLVTGAVAARLRRHARPTSAIAAHPGGPAAL 318
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: A0A6G0WN05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN05_9STRA) HSP 1 Score: 295 bits (755), Expect = 1.450e-93 Identity = 141/305 (46.23%), Postives = 199/305 (65.25%), Query Frame = 1
Query: 106 QGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKTVRAWDMRSRNR-SPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGVLRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPGEPMLLTASYDGSAVLWAP*AK 1017
+GP + VRF G YC+ G DRT+RL+NPHR PD + A+++K+Y G HGYE+ DVA+ DN++FVSCG DK F WDVSTG V+R+ +GH +N+ F + +VL +ASYD TVR WDMR+RN +PIQ L+ +DS TSV + E++ CVDG VR YD+R + ED++H PVT +++ D NC++ + GVLR EK SG++LNT+ GH SY +E +N DA+++SGSE+G V +WD++ + + H RPV S++ HP EPM+LTAS D + +W P A
Sbjct: 13 EGPVYAVRFNEKGTYCMTCGSDRTIRLWNPHREGPDGPTS--------AMMIKAYKGLHGYEIRDVAIENDNAKFVSCGRDKVVFHWDVSTGKVIRKFEGHASSVNAVEFNDDCTVLCSASYDSTVRLWDMRARNSFTPIQVLDHFRDSVTSVRV--TDHEIITSCVDGFVRVYDIRAGMLTEDNLHHPVTCLALTSDLNCIVASTTNGVLRFFEKKSGTELNTFQGHSVASYGLECAFSNDDAYILSGSEDGRVVVWDMLTKDTALSFQAHDRPVRSIASHPAEPMILTASVDNTVKVWRPVAS 307
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: A0A484DRX5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRX5_BRELC) HSP 1 Score: 286 bits (731), Expect = 6.650e-90 Identity = 139/314 (44.27%), Postives = 200/314 (63.69%), Query Frame = 1
Query: 67 ELPGAPVRRMTAGQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKTVRAWDMRSRNR-SPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGVLRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPGEPMLLTASYDGSAVLWA 1005
E+P +R + GP +RF G Y + GQD+T++L+NPHR D EE K QALLVK+Y G HGY+V DV + DNS+F SCG D+A F+WDV T V+R+ +GHE +N F A SVL + SYDKTVRAWD+R+RN PIQ L+ +DS TS+ + E+V GCVDG VRTYDLR ++ + ++ PV + S D +L CL G +RL+EK +G ++ ++ GH+ ++Y++E ++++ A V+SGSE+G VY WD+V+ K + H +PV ++ YHP ML+T DGS +W+
Sbjct: 5 EVPTVCIRELHGHHGPINSIRFNSKGTYVMTCGQDKTIKLWNPHR---DCEEKPK-----QALLVKTYEGRHGYDVQDVTIARDNSKFASCGRDRAVFMWDVQTAKVIRKFEGHEHSVNCVQFNAYSSVLLSGSYDKTVRAWDIRARNAYMPIQILDDFRDSVTSMVV--TDHEIVAGCVDGIVRTYDLRAGQLFREHINEPVVSVTQSPDARFILAGCLDGSIRLIEKVNGREIKSFRGHIVQNYKIECTISSSGAFVLSGSEDGKVYWWDLVDEKCRNSFSAHAKPVRALGYHPEGSMLVTGCVDGSGKVWS 308
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: H3G7W6_PHYRM (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3G7W6_PHYRM) HSP 1 Score: 284 bits (727), Expect = 1.290e-89 Identity = 136/299 (45.48%), Postives = 194/299 (64.88%), Query Frame = 1
Query: 109 GPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKTVRAWDMRSRNRS-PIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGVLRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPGEPMLLTASYDGSAVLW 1002
GP VRF G Y + GQD+TV+L+NPHR E+ +ALL+K+Y G HGY+V DVA+ DNS+F SCG D+ F+WDV T V+R+ +GHE IN + A+ SVL + SYDKT+RAWD+R+RN PIQ ++ KDS TS+ E++ GCVDG VRTYDLR ++ + ++ PV ++S D LL CL G +RL+EK++G+++ +Y GHL + Y++E ++ A V+SGSE+G VY WDIV+ K T+TL H +PV +++ HP M +T DG+A +W
Sbjct: 1 GPVNAVRFNAKGTYVMTCGQDKTVKLWNPHR--------DAVEKPNEALLIKTYEGRHGYDVQDVAIAHDNSKFASCGRDRDVFMWDVPTAQVIRKFEGHEHSINCVRYNADSSVLLSGSYDKTIRAWDIRARNAFVPIQVMDDFKDSVTSMVVKEH--EIIAGCVDGVVRTYDLRAGQLFREHINEPVVSVALSPDARFLLAGCLDGSIRLIEKTNGTEVESYRGHLVRDYKIECGFSSDGAFVLSGSEDGKVYWWDIVDAKQTQTLVAHEKPVRALACHPESSMFVTGCTDGTAKVW 289
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: K3WKM8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKM8_GLOUD) HSP 1 Score: 281 bits (720), Expect = 2.780e-88 Identity = 141/312 (45.19%), Postives = 191/312 (61.22%), Query Frame = 1
Query: 70 LPGAPVRRMTAGQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKTVRAWDMRSRNRS-PIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGVLRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPGEPMLLTASYDGSAVLW 1002
+P R + GP VRF G Y + GQD+TVRL+NPHR D ALLVK+Y G HGY+V DVA+ DNS+F SCG DKA FLWDV T V+R+ +GHE +N + + +VL + SYDKT+RAWDMR+RN PIQ ++ KDS TS+ S E+ GCVDG VRT+DLR V+ + + PV S+S D LL +CL G +RL+EK SG + Y GH +YR+ES ++ A V+SGSE+G VY WD+V ++ + H +P+ +++ HP P+L+T DGSA +W
Sbjct: 5 IPTTCARVLRGHHGPVNAVRFNAKGTYVMTCGQDKTVRLWNPHRDGLDAPG--------DALLVKTYEGRHGYDVQDVAIAHDNSKFASCGRDKAVFLWDVPTAKVIRKFEGHEHSVNCVRYNGDSAVLLSGSYDKTIRAWDMRARNAYLPIQVIDDFKDSVTSMVV--SDHEITAGCVDGIVRTFDLRAGMVYREHIEEPVVSVSLSPDARFLLASCLDGSIRLIEKESGQETKRYQGHRMDAYRIESCFSSDGAFVLSGSEDGKVYTWDLVTARI-ESFHAHGKPIRALASHPELPLLVTGCIDGSAKVW 305
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: A0A1V9Z342_9STRA (Mitogen-activated protein kinase organizer n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z342_9STRA) HSP 1 Score: 281 bits (719), Expect = 3.570e-88 Identity = 148/300 (49.33%), Postives = 190/300 (63.33%), Query Frame = 1
Query: 109 GPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKTVRAWDMRSRNR-SPIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGVLRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEGKVT-RTLKHHRRPVCSMSYHPGEPMLLTASYDGSAVLW 1002
GP VRF G YC+ G DRT+RL+NPHR D E+ A LVKSY G HGYEV DVA+ DN++FVSCG DKA F WDV TG VVR+++GH IN+ + + SVL +ASYD TVR WDMRSRN +PIQ LE KDS TSV E++ G VDG VRTYDLR + +D+VH+PV ++S D NC++ + + L EK++GS+LN + GH SY +E+ DAH+ SGSE+G V IWD+V T ++ H +PV S+ HP E MLLTAS D + +W
Sbjct: 14 GPVHAVRFNDKGTYCMSCGNDRTIRLWNPHREGLDGPES--------AFLVKSYTGFHGYEVRDVAIENDNAKFVSCGRDKAIFQWDVVTGKVVRKLEGHTHSINAVEYNEDCSVLASASYDSTVRLWDMRSRNSFAPIQILEHFKDSVTSVKLTTH--EIIAGSVDGHVRTYDLRAGLLTQDNVHSPVVSVNLSSDLNCVVAATMAKTVYLFEKATGSELNAFEGHRMDSYGVEAGFTYDDAHIYSGSEDGRVVIWDMVHKTDTSKSFTAHHKPVRSVVSHPTENMLLTASVDSTVKVW 303
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Match: A0A8K1FM24_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM24_PYTOL) HSP 1 Score: 280 bits (716), Expect = 1.110e-87 Identity = 141/312 (45.19%), Postives = 196/312 (62.82%), Query Frame = 1
Query: 70 LPGAPVRRMTAGQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDKEETTKAEELEQALLVKSYAGPHGYEVLDVAVLADNSRFVSCGEDKAAFLWDVSTGAVVRRIQGHEQRINSCCFGAEGSVLFTASYDKTVRAWDMRSRNRS-PIQTLEGCKDSATSVCTAPSGDEVVVGCVDGKVRTYDLRGARVHEDDVHAPVTHASVSHDGNCLLVTCLGGVLRLLEKSSGSQLNTYTGHLHKSYRMESWLANTDAHVISGSEEGHVYIWDIVEGKVTRTLKHHRRPVCSMSYHPGEPMLLTASYDGSAVLW 1002
+P VR + GP VRF G Y + GQD+T+RL+NPHR E+ LL+K+Y G HGY+V DVA+ ADNS+F SCG DKA F+WDV TG V+R+ +GH+Q +N + A+GSVL + SYDKTVR WD+R+RN PIQTL+ KDS TS+ S E+V GCVDG VRT+DLR +V D + PV ++S D LL + L G LRL+++ SG+++ +Y GH SY++E +V+SGSE+G + WD+V G++ +T H +PV +++ HP E ML+T GS +W
Sbjct: 5 VPSQCVRVLRGHHGPVNAVRFNEKGTYVMTCGQDKTIRLWNPHRDG--------LEQQGDGLLIKTYQGRHGYDVQDVAIAADNSKFASCGRDKAVFMWDVPTGKVIRKFEGHDQSVNCVRYNADGSVLLSGSYDKTVRCWDIRARNSYLPIQTLDEFKDSVTSLVV--SDHEIVAGCVDGVVRTFDLRAGKVFRDQIDEPVVSIALSTDRQQLLASSLDGSLRLIDRGSGTEMKSYRGHRIDSYKIECAFTFDGGYVVSGSEDGQICSWDLVNGRM-QTFHAHGKPVRALACHPEEAMLVTGCVVGSVKVW 305 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1137.1202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1137.1202.1 >prot_Ecto-sp13_S_contig1137.1202.1 ID=prot_Ecto-sp13_S_contig1137.1202.1|Name=mRNA_Ecto-sp13_S_contig1137.1202.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp MELPGAPVRRMTAGQGPSFVVRFTGDGKYCLVAGQDRTVRLYNPHRADPDback to top mRNA from alignment at Ecto-sp13_S_contig1137:4491..7537- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1137.1202.1 ID=mRNA_Ecto-sp13_S_contig1137.1202.1|Name=mRNA_Ecto-sp13_S_contig1137.1202.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1137:4491..7537- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1137:4491..7537- >mRNA_Ecto-sp13_S_contig1137.1202.1 ID=mRNA_Ecto-sp13_S_contig1137.1202.1|Name=mRNA_Ecto-sp13_S_contig1137.1202.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1137:4491..7537- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |