mRNA_Ecto-sp13_S_contig11319.1173.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11319.1173.1
Unique NamemRNA_Ecto-sp13_S_contig11319.1173.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A7S2Y1A2_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1A2_9STRA)

HSP 1 Score: 487 bits (1253), Expect = 3.560e-172
Identity = 231/258 (89.53%), Postives = 247/258 (95.74%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMF-NSLVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDLVELFKVGG+CPD+NYLFLGDFVDRGYYSVETFLLLLALKVR+PDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSAIID K+FCVHGGLSPSIN LDQ  + V+DRKQEVPHDGAMCDLLWSDPEEI+GWG+SPRGAGYLFGGDVV+KFN+TNDL LIARAHQLVMEGHRSMF N+LVTVWSAPNYCYRCGNVAAILELDE+L QSFKIFEAAP ++RGVPQK+PAP  F
Sbjct:   85 ICGDIHGQFYDLVELFKVGGDCPDRNYLFLGDFVDRGYYSVETFLLLLALKVRFPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAIIDGKVFCVHGGLSPSINNLDQ--IRVIDRKQEVPHDGAMCDLLWSDPEEIEGWGISPRGAGYLFGGDVVEKFNQTNDLCLIARAHQLVMEGHRSMFSNALVTVWSAPNYCYRCGNVAAILELDEHLTQSFKIFEAAPPEMRGVPQKNPAPDYF 340
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A7S2KED5_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KED5_9STRA)

HSP 1 Score: 486 bits (1251), Expect = 9.560e-172
Identity = 232/258 (89.92%), Postives = 246/258 (95.35%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMF-NSLVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSAII+DKIFCVHGGLSPSINTLDQ  + V+DRK EVPHDGAMCDL+WSDPEEIDGWGLSPRGAGYLFGGDVVD FNE NDL+LIARAHQLVMEGH+SMF +SLVTVWSAPNYCYRCGNVAAILELDENL +SFKIFEAAP ++RGVP K+  PA++
Sbjct:   92 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAIIEDKIFCVHGGLSPSINTLDQ--IRVIDRKCEVPHDGAMCDLMWSDPEEIDGWGLSPRGAGYLFGGDVVDMFNEKNDLELIARAHQLVMEGHKSMFGDSLVTVWSAPNYCYRCGNVAAILELDENLKKSFKIFEAAPAEMRGVPLKNNMPADY 347
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A6V1QJP1_HETAK (Serine/threonine-protein phosphatase n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A6V1QJP1_HETAK)

HSP 1 Score: 484 bits (1247), Expect = 3.490e-171
Identity = 230/258 (89.15%), Postives = 246/258 (95.35%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMFNS-LVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDLVELFKVGG+CPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSA+ID ++  VHGGLSPSINTLDQ  + VLDRKQEVPHDGAMCDLLWSDPEEIDGWG+SPRGAGYLFGGDVV+KFN+TN++ LIARAHQLVMEGHRSMFN+ LVTVWSAPNYCYRCGNVAAILELDE+LNQSFKIFEAAP + RGVP+K+PAP  F
Sbjct:   90 ICGDIHGQFYDLVELFKVGGDCPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSALIDGRVLTVHGGLSPSINTLDQ--IRVLDRKQEVPHDGAMCDLLWSDPEEIDGWGISPRGAGYLFGGDVVEKFNQTNNVSLIARAHQLVMEGHRSMFNNALVTVWSAPNYCYRCGNVAAILELDEHLNQSFKIFEAAPAEARGVPKKNPAPDYF 345
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A835ZL25_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL25_9STRA)

HSP 1 Score: 483 bits (1242), Expect = 4.950e-171
Identity = 232/258 (89.92%), Postives = 241/258 (93.41%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMFN-SLVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDL+ELFKVGG+CPDKNYLFLGDFVDRG+YSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSAIIDD+I CVHGGLSPSINTLDQ    VLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVV KFNE N L LIARAHQLVMEGHRSMF  +LVTVWSAPNYCYRCGNVAAILELDE+L ++FKIFEAAP D RGVP KSPAP  F
Sbjct:   51 ICGDIHGQFYDLMELFKVGGDCPDKNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAIIDDRILCVHGGLSPSINTLDQVR--VLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVQKFNEANGLTLIARAHQLVMEGHRSMFGGALVTVWSAPNYCYRCGNVAAILELDEHLGRAFKIFEAAPQDTRGVPAKSPAPDYF 306
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A1E7F5R6_9STRA (Serine/threonine-protein phosphatase n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7F5R6_9STRA)

HSP 1 Score: 483 bits (1242), Expect = 6.370e-171
Identity = 231/258 (89.53%), Postives = 243/258 (94.19%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMFN-SLVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSAII+DKIF VHGGLSPSINTLDQ  + V+DRKQEVPHDGAMCDL+WSDPEEIDGWGLSPRGAGYLFGGD+V  FNE NDL LIARAHQLVMEGHRSMFN +LVTVWSAPNYCYRCGNVAAILELDENL++SFKIF+AAP + RGVP K+P P  F
Sbjct:   58 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAIIEDKIFTVHGGLSPSINTLDQ--IRVIDRKQEVPHDGAMCDLMWSDPEEIDGWGLSPRGAGYLFGGDIVSMFNERNDLDLIARAHQLVMEGHRSMFNDALVTVWSAPNYCYRCGNVAAILELDENLDRSFKIFDAAPQEARGVPIKNPPPDYF 313
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A024TIH8_9STRA (Serine/threonine-protein phosphatase n=27 Tax=Oomycota TaxID=4762 RepID=A0A024TIH8_9STRA)

HSP 1 Score: 482 bits (1241), Expect = 1.210e-170
Identity = 227/258 (87.98%), Postives = 242/258 (93.80%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMFNS-LVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDL ELF VGGECP+ NYLF+GDFVDRG+YSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSAII+DKIFCVHGGLSPSINTLDQ  + ++DRKQEVPHDGAMCDL+WSDPE+IDGWGLSPRGAGYLFGGDVVDKFN+TND+QLI RAHQLVMEGH+SMFN+ LVTVWSAPNYCYRCGNVAAILELDE+L Q FKIFEAAP D RGVP K PAP  F
Sbjct:   66 ICGDIHGQFYDLKELFNVGGECPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAIIEDKIFCVHGGLSPSINTLDQ--IRIIDRKQEVPHDGAMCDLMWSDPEDIDGWGLSPRGAGYLFGGDVVDKFNQTNDIQLICRAHQLVMEGHKSMFNNALVTVWSAPNYCYRCGNVAAILELDESLEQKFKIFEAAPQDARGVPSKKPAPDYF 321
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A7S1VXF1_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VXF1_9STRA)

HSP 1 Score: 479 bits (1234), Expect = 1.920e-170
Identity = 230/258 (89.15%), Postives = 242/258 (93.80%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMFN-SLVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSAII+DKIF VHGGLSPSINTLDQ  + V+DRKQEVPHDGAMCDL+WSDPEEIDGWGLSPRGAGYLFGGD+V  FNE NDL LIARAHQLVMEGHRSMF+ +LVTVWSAPNYCYRCGNVAAILELDENL +SFKIF+AAP + RGVP K+P P  F
Sbjct:   11 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAIIEDKIFTVHGGLSPSINTLDQ--IRVIDRKQEVPHDGAMCDLMWSDPEEIDGWGLSPRGAGYLFGGDIVAMFNERNDLDLIARAHQLVMEGHRSMFHDALVTVWSAPNYCYRCGNVAAILELDENLERSFKIFDAAPQEARGVPIKNPPPDYF 266
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A024GSC0_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Albugo TaxID=65356 RepID=A0A024GSC0_9STRA)

HSP 1 Score: 481 bits (1238), Expect = 2.090e-170
Identity = 226/258 (87.60%), Postives = 242/258 (93.80%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMFNS-LVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDL ELF VGGECP+ NYLF+GDFVDRG+YSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSAII+DKIFCVHGGLSPSINTLDQ  + ++DRKQEVPHDGAMCDL+WSDPE+IDGWGLSPRGAGYLFGGDVVDKFN+TN++QLI RAHQLVMEGH+SMFN+ LVT+WSAPNYCYRCGNVAAILELDENL Q FKIFEAAP D RGVP K PAP  F
Sbjct:   52 ICGDIHGQFYDLKELFSVGGECPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAIIEDKIFCVHGGLSPSINTLDQ--IRIIDRKQEVPHDGAMCDLMWSDPEDIDGWGLSPRGAGYLFGGDVVDKFNQTNNIQLICRAHQLVMEGHKSMFNNALVTIWSAPNYCYRCGNVAAILELDENLEQRFKIFEAAPQDARGVPAKKPAPDYF 307
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A6V2PSS9_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A6V2PSS9_9STRA)

HSP 1 Score: 482 bits (1241), Expect = 3.180e-170
Identity = 232/258 (89.92%), Postives = 243/258 (94.19%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMFN-SLVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSAII+DKIF VHGGLSPSINTLDQ  + V+DRKQEVPHDGAMCDL+WSDPEEIDGWGLSPRGAGYLFGGDVV  FNE NDL LIARAHQLVMEGHRSMFN +LVTVWSAPNYCYRCGNVAAILELDENL++SFKIF+AAP + RGVP K+P P  F
Sbjct:   93 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAIIEDKIFTVHGGLSPSINTLDQ--IRVIDRKQEVPHDGAMCDLMWSDPEEIDGWGLSPRGAGYLFGGDVVAMFNERNDLDLIARAHQLVMEGHRSMFNDALVTVWSAPNYCYRCGNVAAILELDENLDRSFKIFDAAPQEARGVPIKNPPPDYF 348
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BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Match: A0A7S1VVN2_9STRA (Serine/threonine-protein phosphatase n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1VVN2_9STRA)

HSP 1 Score: 479 bits (1234), Expect = 1.000e-168
Identity = 230/258 (89.15%), Postives = 242/258 (93.80%), Query Frame = 1 
Query:    1 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWSDPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSMFN-SLVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQKSPAPAEF 771
            ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCT+IFDYLSLSAII+DKIF VHGGLSPSINTLDQ  + V+DRKQEVPHDGAMCDL+WSDPEEIDGWGLSPRGAGYLFGGD+V  FNE NDL LIARAHQLVMEGHRSMF+ +LVTVWSAPNYCYRCGNVAAILELDENL +SFKIF+AAP + RGVP K+P P  F
Sbjct:  121 ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTEIFDYLSLSAIIEDKIFTVHGGLSPSINTLDQ--IRVIDRKQEVPHDGAMCDLMWSDPEEIDGWGLSPRGAGYLFGGDIVAMFNERNDLDLIARAHQLVMEGHRSMFHDALVTVWSAPNYCYRCGNVAAILELDENLERSFKIFDAAPQEARGVPIKNPPPDYF 376
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11319.1173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2Y1A2_9STRA3.560e-17289.53Serine/threonine-protein phosphatase n=1 Tax=Fibro... [more]
A0A7S2KED5_9STRA9.560e-17289.92Serine/threonine-protein phosphatase n=1 Tax=Lepto... [more]
A0A6V1QJP1_HETAK3.490e-17189.15Serine/threonine-protein phosphatase n=2 Tax=Ochro... [more]
A0A835ZL25_9STRA4.950e-17189.92Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
A0A1E7F5R6_9STRA6.370e-17189.53Serine/threonine-protein phosphatase n=3 Tax=Bacil... [more]
A0A024TIH8_9STRA1.210e-17087.98Serine/threonine-protein phosphatase n=27 Tax=Oomy... [more]
A0A7S1VXF1_9STRA1.920e-17089.15Serine/threonine-protein phosphatase n=1 Tax=Gramm... [more]
A0A024GSC0_9STRA2.090e-17087.60Serine/threonine-protein phosphatase n=2 Tax=Albug... [more]
A0A6V2PSS9_9STRA3.180e-17089.92Serine/threonine-protein phosphatase n=2 Tax=Medio... [more]
A0A7S1VVN2_9STRA1.000e-16889.15Serine/threonine-protein phosphatase n=6 Tax=Bacil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11319contigEcto-sp13_S_contig11319:2377..5280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score531.9
Seed ortholog evalue1.6e-148
Seed eggNOG ortholog2880.D7G7H3
Preferred namePPP4C
Model size771
KEGG koko:K15423
KEGG Pathwayko04922,map04922
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000278,GO:0000775,GO:0000902,GO:0000904,GO:0001525,GO:0001568,GO:0001944,GO:0003002,GO:0003674,GO:0003824,GO:0004704,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005521,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0006282,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007017,GO:0007049,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007409,GO:0007417,GO:0007420,GO:0007623,GO:0008150,GO:0008152,GO:0008287,GO:0008589,GO:0009314,GO:0009416,GO:0009605,GO:0009628,GO:0009648,GO:0009649,GO:0009653,GO:0009799,GO:0009855,GO:0009889,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010569,GO:0010646,GO:0010647,GO:0010648,GO:0015630,GO:0016020,GO:0016043,GO:0016310,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0021952,GO:0021953,GO:0021954,GO:0021955,GO:0022008,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030154,GO:0030182,GO:0030234,GO:0030289,GO:0030510,GO:0030513,GO:0031175,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032922,GO:0032989,GO:0032990,GO:0032991,GO:0034097,GO:0035239,GO:0035295,GO:0035556,GO:0036211,GO:0038061,GO:0042221,GO:0042578,GO:0042752,GO:0043153,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045879,GO:0047485,GO:0048262,GO:0048264,GO:0048468,GO:0048511,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051252,GO:0051321,GO:0051716,GO:0051726,GO:0060255,GO:0060322,GO:0061564,GO:0065007,GO:0065009,GO:0070013,GO:0070555,GO:0070887,GO:0071310,GO:0071345,GO:0071347,GO:0071704,GO:0071840,GO:0071944,GO:0072357,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0080135,GO:0090092,GO:0090100,GO:0090287,GO:0098687,GO:0098772,GO:0120036,GO:0120039,GO:0140096,GO:1901564,GO:1902494,GO:1903293,GO:1903506,GO:2000112,GO:2000779,GO:2001020,GO:2001141
Exons6
EggNOG free text desc.Serine threonine-protein phosphatase
EggNOG OGsCOG0639@1,KOG0372@2759
Ec32 ortholog descriptionProtein phosphatase 4 catalytic subunit
Ec32 orthologEc-02_000270.1
EC3.1.3.16
Cds size771
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11319.1173.1prot_Ecto-sp13_S_contig11319.1173.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11319 2377..5280 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462592.4010282-CDS-Ecto-sp13_S_contig11319:2376..24511681462592.4010282-CDS-Ecto-sp13_S_contig11319:2376..2451Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11319 2377..2451 -
1681462592.4138331-CDS-Ecto-sp13_S_contig11319:2872..29951681462592.4138331-CDS-Ecto-sp13_S_contig11319:2872..2995Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11319 2873..2995 -
1681462592.426072-CDS-Ecto-sp13_S_contig11319:3351..35331681462592.426072-CDS-Ecto-sp13_S_contig11319:3351..3533Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11319 3352..3533 -
1681462592.443123-CDS-Ecto-sp13_S_contig11319:4060..42021681462592.443123-CDS-Ecto-sp13_S_contig11319:4060..4202Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11319 4061..4202 -
1681462592.4533095-CDS-Ecto-sp13_S_contig11319:4817..49131681462592.4533095-CDS-Ecto-sp13_S_contig11319:4817..4913Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11319 4818..4913 -
1681462592.4609807-CDS-Ecto-sp13_S_contig11319:5127..52801681462592.4609807-CDS-Ecto-sp13_S_contig11319:5127..5280Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11319 5128..5280 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11319.1173.1

>prot_Ecto-sp13_S_contig11319.1173.1 ID=prot_Ecto-sp13_S_contig11319.1173.1|Name=mRNA_Ecto-sp13_S_contig11319.1173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=257bp
ICGDIHGQFYDLVELFKVGGECPDKNYLFLGDFVDRGYYSVETFLLLLAL
KVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYL
SLSAIIDDKIFCVHGGLSPSINTLDQASLLVLDRKQEVPHDGAMCDLLWS
DPEEIDGWGLSPRGAGYLFGGDVVDKFNETNDLQLIARAHQLVMEGHRSM
FNSLVTVWSAPNYCYRCGNVAAILELDENLNQSFKIFEAAPTDVRGVPQK
SPAPAEF
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mRNA from alignment at Ecto-sp13_S_contig11319:2377..5280-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11319.1173.1 ID=mRNA_Ecto-sp13_S_contig11319.1173.1|Name=mRNA_Ecto-sp13_S_contig11319.1173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2904bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11319:2377..5280- (Ectocarpus species13 EcNAP12_S_4_19m)
ATATGCGGGGATATCCATGGTCAGTTTTACGATCTTGTGGAGCTGTTCAA
GGTAGGGGGCGAGTGTCCAGACAAGAACTACCTGTTTCTGGGGGACTTCG
TGGACAGGGGTTACTACAGCGTCGAGACCTTTCTCTTGCTGCTGGCGCTC
AAGGTGCGGTACTTTCCTCTCCCTGTGTGTGAGGTTAGGTTAGGTTTAAG
CCGCGAAACACTTGACCAAACATTAACCTACCGCTAGCCCTCCGCGTAGA
AGAGCGTGAGGACTGTTTGGTGCTCACGTCGAGGGCGGGCGGCGGCACAG
AAGGACCGTTGCAGCACATTTTTGTTTTTCTTATGAGTGGGTTTGACCGC
GTTTCGGTTGTGTTCAGGTGCGATACCCGGATCGGATCACGCTGATTCGA
GGCAATCACGAATCGAGGCAGATCACACAAGTCTACGGCTTCTACGATGA
GTGTCTCCGGAAGGTGACTACAACATGCACTCATCGTCCTTTCCTGTTGC
TTTGTTTTGCTTAGGTCCATGCCACCGTCGGTAAAAGTGTGGGGCTCTGC
GGCATCAAATGCGTATATGGTGCTCGTGTGGGGCTACAGCGTCTCGTTGG
TTTCATGCGCATAGAGCAGCTGTTCGGAGGTAGTGGCCCTAAGGTTTTTT
CGGCAGGGTGTTTTCTCACCGCTCTTCATTTTCGACGACGTTTGGCGCCG
TTGTTTTTGTTTGCGCGCAAACCGCTTCCCATTATCGCGATGTGAGACTC
GGAATCCTGACGATGACCTAGTGCAGGGTAGCGAGCTGCCGGCAGGCCAA
GCCACGTTGTGTGATCATCGATTCTTGTGAATCCTTCAAGTCGCACGCTC
CTCCACGGACATGGAATGCAACATGCTATTATCTCTCCAAGTCGATCCAG
TTACTGTTTCGTCGAGCGATTCCGATTCCACCCATTGGAAGTAGTATTGC
CCTCGGTCGAATCGGACTTTTGCTCGATGACTAGTGCTTCGCTTGTCCGT
GGTATCTGACACTTGCTCTCGTTTCGATGCGATGCCGCGTTGGTGACCCT
GTTTAACCGTTCATCTTGCCCTCATCAGTACGGGTCGGTGAACGTGTGGA
GGTATTGCACCGACATCTTCGACTACCTTAGCCTGTCCGCCATCATCGAT
GACAAGATATTTTGCGTTCATGGGGGCCTCAGCCCTAGCATCAACACATT
GGATCAGGCGAGTTTGTTGGGTTTTTTTTCCCCCTGTTGATCCTTTTCAG
CGAGAATGTGATACAGGTGTTACAGTTGCAGCGGGGTGACGGATTCAAGT
GGTGTACGCAACAGGGTCAAGCAATAGTCTTGTGGACGTGACTGGTATGG
TACACCTTAGTGTCTCTCATACACCAGATCAACCCAGTAGCCCCAAACCC
TAAGTTCAAAGCGAGCGTCTTGTAGGCATGACTGTCTGATCACCCCACAC
CACGAGGTGCTTGGTGTCTCTCGTACACCGGACAATGCCGCATTTGACCC
TTCAGGTCTGCTGCTGCTTTAGTCGGCCTCAAGTGAGACGGTTGAAACGT
ACGGAAGACCTACCAATGAGATTACAGACGACCCGGTCGACCTCGCCTTG
CGGGTCGGTTGCTCCCGAATTTCGCTGCTGAGCTAGCTGTGTTGTGTCCG
TGAGCACGCGTTCAAAGTGTCTTGGTTTTGCTTACGATGACAACGCTTGC
TGTCCTTCGTGAACACCGCCCCGCGCTTTTGGTTGCACAGATCCGAGTGT
TGGACCGAAAGCAGGAGGTACCGCACGACGGGGCAATGTGCGACTTGCTG
TGGTCGGACCCGGAGGAAATCGACGGGTGGGGGCTCAGCCCGAGAGGGGC
CGGCTACCTCTTCGGCGGGGACGTTGTGGATAAGTTCAACGAAACCAACG
ACTTGCAGCTCATCGCGAGGGCGCATCAGGTGATTGTTGTTGTTATTGTT
GTTGTTGCTGTTTCTGTTGCTAGTAGTGGCGGTGTTGTCGCTTTTGTTGC
TGCTGCTACTCTGATGCTGGTGTTTGTCGTTGCAGGTGCCGCTGCCGCGT
CCATGCAGCCAAAGCCCGTGTTTATGCTCGACTTACGGGCCAGCATGGAT
TTTAACCATGGATAGAGTACGGCGTGTGGTGGGTGCTCCATTCGGGACTA
GTGTTGGTTTTTTCTTTGTAGTACTTCGAAGTAGTTTTTATTGTTCAGTT
CTGGGACGCAATGTTGGCATCCAACCGCTGTCGTGTGTGTGGTTTCTGCA
CTTGGACGGAACTCTACCATGTCGCTCGTCCGCAGCTCGTGATGGAAGGT
CACCGGTCGATGTTCAACTCCCTTGTTACTGTGTGGTCTGCACCGAACTA
CTGCTACCGCTGCGGGAACGTTGCTGCTATCCTCGAGCTCGACGAGAACC
TCAACCAGGTAAACCTACACTTTCATGCACTAACCCAAGTTTTTCGACAT
CTACGAGATCTACGAGACCGACCAACGGTTTACGAAACGCTTATTTTTTG
TGATGCCCTCGCCATGTCGACGAGATCTGCGAGACTCAGCATCAAGGATA
TAGCAAGTACGAAACTGGTACAGGATAGTTTGCGAAGCTGCGAGACCTTA
GACCTCCGTCGACGATAGTCTCAACTACTTTTCCACTGCGGTTGGTGTAG
ACCAGTGCCCTTGGCGTGCGGAGGTTGTTTTTTTTCGTGGCCAAGAGCGA
ATTTCCGTCTTGCCACGTACTCCTATTTGTCTGAGAGTACCGCGCAGCTC
GTGGAGTTATCATCAACGTTCGTATCCGCCCTGTCTGCGTGCCCCCCCCC
CCCCACCCCACCCCCACTTCGGTATGCAGAGCTTCAAGATCTTCGAGGCG
GCACCGACGGATGTACGGGGGGTACCACAGAAGAGTCCTGCACCCGCGGA
ATTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11319:2377..5280-

>mRNA_Ecto-sp13_S_contig11319.1173.1 ID=mRNA_Ecto-sp13_S_contig11319.1173.1|Name=mRNA_Ecto-sp13_S_contig11319.1173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=771bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11319:2377..5280- (Ectocarpus species13 EcNAP12_S_4_19m)
ATATGCGGGGATATCCATGGTCAGTTTTACGATCTTGTGGAGCTGTTCAA
GGTAGGGGGCGAGTGTCCAGACAAGAACTACCTGTTTCTGGGGGACTTCG
TGGACAGGGGTTACTACAGCGTCGAGACCTTTCTCTTGCTGCTGGCGCTC
AAGGTGCGATACCCGGATCGGATCACGCTGATTCGAGGCAATCACGAATC
GAGGCAGATCACACAAGTCTACGGCTTCTACGATGAGTGTCTCCGGAAGT
ACGGGTCGGTGAACGTGTGGAGGTATTGCACCGACATCTTCGACTACCTT
AGCCTGTCCGCCATCATCGATGACAAGATATTTTGCGTTCATGGGGGCCT
CAGCCCTAGCATCAACACATTGGATCAGGCGAGTTTGTTGGTGTTGGACC
GAAAGCAGGAGGTACCGCACGACGGGGCAATGTGCGACTTGCTGTGGTCG
GACCCGGAGGAAATCGACGGGTGGGGGCTCAGCCCGAGAGGGGCCGGCTA
CCTCTTCGGCGGGGACGTTGTGGATAAGTTCAACGAAACCAACGACTTGC
AGCTCATCGCGAGGGCGCATCAGCTCGTGATGGAAGGTCACCGGTCGATG
TTCAACTCCCTTGTTACTGTGTGGTCTGCACCGAACTACTGCTACCGCTG
CGGGAACGTTGCTGCTATCCTCGAGCTCGACGAGAACCTCAACCAGAGCT
TCAAGATCTTCGAGGCGGCACCGACGGATGTACGGGGGGTACCACAGAAG
AGTCCTGCACCCGCGGAATTC
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