mRNA_Ecto-sp13_S_contig11306.1159.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: A0A6H5K7J4_9PHAE (Fructose-bisphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7J4_9PHAE) HSP 1 Score: 276 bits (706), Expect = 1.290e-80 Identity = 200/307 (65.15%), Postives = 200/307 (65.15%), Query Frame = 1
Query: 1 MSRAQSAPLAFFVVLVVALSTARAFVVHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLIGPAVWAAFKEEQKGVTRTLLGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRPVPRTTLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDEMHG 921
M RAQSAPL FFVVLVVALSTARAFVVHSP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLIGPAVWAAFKEEQKGVTRTLLGFD RQRPVPR TLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGG ESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDEMHG
Sbjct: 1200 MPRAQSAPLNFFVVLVVALSTARAFVVHSPPSSSSCPFNRQRCSSSTSMTAHGHHLHNGKTPGGNSSPIIAATGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLLIGPAVWAAFKEEQKGVTRTLLGFDDDNASGKEADGKAAPPPERAGEESGVENETMEEELRRWRRQQEEQL---RQRPVPRMTLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGXXXXXXXXXXESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDEMHG 1503
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: D8LTW4_ECTSI (Fructose-bisphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW4_ECTSI) HSP 1 Score: 245 bits (625), Expect = 6.150e-74 Identity = 179/203 (88.18%), Postives = 179/203 (88.18%), Query Frame = 1
Query: 313 GLLIGPAVWAAFKEEQKGVTRTLLGFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRPVPRTTLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDEMHG 921
GLLIGPAVWAAFKEEQKGVTRTLLGFD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QRPVPRTTLGTFM ETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQD G VNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDE HG
Sbjct: 57 GLLIGPAVWAAFKEEQKGVTRTLLGFDDDNAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--QRPVPRTTLGTFMVETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDGGXXXXXXXXXXXXXVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDEKHG 257
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: A0A836CLE5_9STRA (Fructose-bisphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE5_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 5.070e-19 Identity = 49/103 (47.57%), Postives = 65/103 (63.11%), Query Frame = 1
Query: 598 RSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVG 906
R P++ M IM +V C +S LV+RAQ + +AG++ GGV N+QGE QK+LDV+SN I + C PGG+SCVASEEEE P+MC+ VVG
Sbjct: 71 RRPEISDMSSIMMAVESACKTLSALVKRAQTDDLAGMYHGGDSGGV----------NIQGEAQKKLDVVSNRIMVAQLCSPGGLSCVASEEEEYPQMCSTVVG 163
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: A0A4D9D427_9STRA (Fructose-bisphosphatase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D427_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.860e-14 Identity = 45/113 (39.82%), Postives = 64/113 (56.64%), Query Frame = 1
Query: 565 TLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVV 903
TL ++ + ++ + P+M + C ++ LVRRAQ + +AGLH GSG ++ NVQGEVQK +DVL+N+I C PG M VASEEEE P C+ V+
Sbjct: 23 TLSRYVEVETWKRRELTDLQPVMSGIESACRGIATLVRRAQCDEIAGLH-----------GSGGDT-NVQGEVQKVMDVLANNILAASMCAPGKMDYVASEEEEEPTYCSVVL 123
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: A0A7S0XES5_9STRA (Fructose-bisphosphatase (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XES5_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 4.930e-14 Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 1
Query: 559 RTTLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVV 903
R T FM RSP++EA+ PI+ S+ + C ++RL+RR + + GL+ +VN+QGE QK+LDV++N I T C G M VASEEE+ P +C++++
Sbjct: 65 RKTFKRFMQVELWRSPELEALFPILDSLERACRDINRLMRRISTDNLDGLNSQF-------------TVNIQGESQKKLDVIANRILKTALCCSGEMELVASEEEDEPCLCSSII 166
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: A0A0S3IV63_9EUGL (Fructose-bisphosphatase (Fragment) n=1 Tax=Lepocinclis playfairiana TaxID=1403386 RepID=A0A0S3IV63_9EUGL) HSP 1 Score: 80.1 bits (196), Expect = 4.480e-13 Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 565 TLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDEMHG 921
TL FM E +PD++ + + S+ C +S+LV+R+ I+GM GL SG SVNVQGE QK+LDV++N + G M +ASEEE+TP V DE +G
Sbjct: 185 TLSRFMLEVARANPDLQELESVFSSIQTACKTISKLVKRSSIDGMTGLQ------------SGGGSVNVQGEEQKKLDVITNDVLKRALKFTGRMGVIASEEEDTPVEVDNTV-DESYG 290
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: A0A7S1XK87_9STRA (Fructose-bisphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XK87_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 6.860e-13 Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 541 RQRPVPRTTLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDE 912
R+ P T F+ P +E + P + S+ K C ++S LVR A + G+ ++ +G +VNVQGE K+LDV++N + C GG+SCVASEEE+ P++CA V+ +E
Sbjct: 100 RRNPKTTKTFARFLEIEALLEPRVEPLRPTLLSLAKACKSISELVRNAAGYDLDGMFEES---------AGQATVNVQGEDVKKLDVVTNRMLKATVCAGGGVSCVASEEEDEPQLCAFVMDNE 214
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: A0A0S3IUH8_9EUGL (Fructose-bisphosphatase (Fragment) n=1 Tax=Lepocinclis tripteris TaxID=135494 RepID=A0A0S3IUH8_9EUGL) HSP 1 Score: 77.4 bits (189), Expect = 3.520e-12 Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 565 TLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETP 882
TL FM E +PD++ + + S+ C +++LV+R+ I+GM GL GGGG +VNVQGE QK+LDV++N + G M +ASEEE+TP
Sbjct: 173 TLTRFMLEVARANPDLQELESVFASIQTACKTIAKLVKRSSIDGMTGLQ---GGGG---------AVNVQGEEQKKLDVITNDVLKRALKFTGRMGVIASEEEDTP 266
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: A0A0S3IUC8_9EUGL (Fructose-bisphosphatase (Fragment) n=1 Tax=Euglena hiemalis TaxID=392896 RepID=A0A0S3IUC8_9EUGL) HSP 1 Score: 77.0 bits (188), Expect = 4.820e-12 Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 565 TLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETPRMCAAVVGDEMHG 921
TL FM E +PD++ + + S+ C +S+LVRR+ I+GM GL GGG +VNVQGE QK+LDV++N + G M +ASEEE+ P V DE +G
Sbjct: 188 TLSRFMLEVARANPDLQELESVFSSIQTACKTISKLVRRSSIDGMTGLQA---GGG---------AVNVQGEEQKKLDVITNDVLKRALKFTGRMGVIASEEEDVPVEVDNTV-DESYG 293
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Match: A0A0S3IV95_9EUGL (Fructose-bisphosphatase (Fragment) n=1 Tax=Phacus orbicularis TaxID=158829 RepID=A0A0S3IV95_9EUGL) HSP 1 Score: 75.9 bits (185), Expect = 1.170e-11 Identity = 41/106 (38.68%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 565 TLGTFMAETRSRSPDMEAMVPIMKSVGKTCTAVSRLVRRAQIEGMAGLHQDDGGGGVAGTGSGSESVNVQGEVQKELDVLSNSIFLTGFCQPGGMSCVASEEEETP 882
TL FM E +PD++ + + S+ C +++LV+R+ I+GM GL GGG +VNVQGE QK+LDV++N + G M +ASEEE+TP
Sbjct: 184 TLSRFMLEVARANPDLQELESVFSSIQTACKTIAKLVKRSAIDGMTGLQA---GGG---------AVNVQGEEQKKLDVITNDVLKRALKFTGRMGVIASEEEDTP 277 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11306.1159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11306.1159.1 >prot_Ecto-sp13_S_contig11306.1159.1 ID=prot_Ecto-sp13_S_contig11306.1159.1|Name=mRNA_Ecto-sp13_S_contig11306.1159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=308bp MSRAQSAPLAFFVVLVVALSTARAFVVHSPPSSSSCPFNSQRSSSSTAMTback to top mRNA from alignment at Ecto-sp13_S_contig11306:2446..5022+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11306.1159.1 ID=mRNA_Ecto-sp13_S_contig11306.1159.1|Name=mRNA_Ecto-sp13_S_contig11306.1159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2577bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11306:2446..5022+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11306:2446..5022+ >mRNA_Ecto-sp13_S_contig11306.1159.1 ID=mRNA_Ecto-sp13_S_contig11306.1159.1|Name=mRNA_Ecto-sp13_S_contig11306.1159.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=924bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11306:2446..5022+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |