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Homology
BLAST of mRNA_Ecto-sp13_S_contig113.1152.1 vs. uniprot
Match: D7FXJ8_ECTSI (Pinin_SDK_memA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXJ8_ECTSI) HSP 1 Score: 979 bits (2532), Expect = 0.000e+0 Identity = 695/799 (86.98%), Postives = 702/799 (87.86%), Query Frame = 2
Query: 143 MDFDRNAIGSLEDVHREWDSLETERAKVEDKLRSFDAAAGGRGGGFGGRGVRVIGGGRGRDRSGGGDWRRDRPRDTSNGGREEAPHRPSQVSRDKYRAMSGTWERGLDPATAALDDDAPPEGRERGGGGTAGLRGGTKGSIAHYQRPADSHGDRRGRGRDRGVAPMHGAGVRGDRDGMRGDRTGDRDVFARGGXXXXXXXTARXDFXXXXXXXXXXXXXXXRARRESNGXXXXXXEPEAKRPRVTSTIVVAGDEDTIGDGTMENGELDRWNTELPPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVTGQEGDQQPMEEDDGCGRRPVGKIVVVSGGGPRGRAANIGGVAGSGGGRGSLASRLGPXXXXXXXXXXXXXXXXXXXXFVPLSERPMPEPSKPELHVAYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDKSIIQRQKSVVEMAAIRQAQEKRQRRQTAENAAREERDEELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTKTLPKLAWSPNEHTDVTQALLADSSKEIDGNIERRKEADDKEFKEIDDSVAERAATRASRRMAHAPGVRQMGVRQDMDANPHGEGNGHRWQMAAGESDTNGEGPGQAHTVAQDDDDGNAGATEDIGGAPSMSQDVVDDGDQPGVAVSEADGGEGREMAGGAGDGMEVDGDDVGVATGLAEADDEEGQEGAEASPPRSLAPAAAVGGDLSTGEXXXXXXXXXXXXXXXXXXXXXXXXXXXR-VEGRTEAIVEAIGEEEVSRA 2536
MDFDRNAIGSLEDVHREWDSLETER +VEDKLRSFDA AGGRGGGFGGRGVRV+GGGRGRDRS GGDWRRDRPRDTSNGGREEAPHRPSQ SRDKYRAMSGTWERGLDPATAALDDDAPPEGR RGGGGTAGLRGGTKGSIAHYQRPADSHGDRRGRGRDRGVAPMHGAGVRGDRDGMRGDRTGDRDVF+R XXXXXXX X XXXXXXXXXXXXXXX XXXXXX VTSTIVVAGDEDT GDGT ENGELDRWNTELPPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGPRGRAANIGGVAGSGGGRGSLASRLGPXXXXXXXXXXXXXXXXXXXXF+PLSERPMPEPSKPELHVAYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDKSIIQRQKSVVEMAAIRQAQEKRQRRQ AE AAREERDEELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTKTLPKLAWSPNEHTDVTQALLADSSKEIDGNIERRKEADDKEF++IDDSVAERAATRASRRMAHAPG RQMGVRQD DAN HGEGNGHRWQMAAGESDTNGEGPGQA TVAQDD DGNAGAT D GGA S SQDVVDD DQPG AVSEADG EGREMAGGAGDGMEVDGDDVGVATG AEADD GQEGAE SP RSLAPAA XXXXXXXXXXXXXXXXXXXXXXXX V+GRTEAI EAIGEEEVSRA
Sbjct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
BLAST of mRNA_Ecto-sp13_S_contig113.1152.1 vs. uniprot
Match: A0A7S2R5E1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5E1_9STRA) HSP 1 Score: 102 bits (253), Expect = 9.750e-19 Identity = 66/174 (37.93%), Postives = 96/174 (55.17%), Query Frame = 2
Query: 1415 KPELHVAYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDKSIIQRQKSVVEMAAIRQAQEKRQRRQTAENAAREERDEELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTKTLPKLAWSPNEHTDVTQALLADSSKEIDGNIERRKEADDKEFKEIDDSVAERAATRASR 1936
KPE AY+D KKRNRRMFG LM HLG A++ L D+ IQ + V E ++ + ++ R+ + E+++ L +RD I +KT AL + Q QL+ FI TK P + W P +H D T ALLA+S ++ I R+ D++EF I+ + ERA R +R
Sbjct: 183 KPESQEAYEDEGVKKRNRRMFGALMGHLGTAQRLLKRDEKKIQSKAKVHETVELKNKESSQKLRKLEREMSAAEKEKALTRRDEILVEMRKTERALMTADWEKRQRQLEPFIATKAQPAIYWLPKDHNDATTALLAESKAAVERLITDRRAEDEQEFVTIETQIRERAEKRQAR 356
BLAST of mRNA_Ecto-sp13_S_contig113.1152.1 vs. uniprot
Match: A0A835ZEL7_9STRA (Pinin_SDK_memA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL7_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 6.860e-13 Identity = 51/150 (34.00%), Postives = 82/150 (54.67%), Query Frame = 2
Query: 1457 KRNRRMFGGLMAHLGRARQQLDHDKSIIQRQKSVVEMAAIRQAQEKRQRRQTAENAAREERDEELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTKTLPKLAWSPNEHTDVTQALLADSSKEIDGNIERRKEADDKEFKEIDDSV 1906
KR++RMFG LM HLG ARQ+LD DK++I Q + A +Q Q+ +Q RQ ++ R+ ++ +R R Q ++ QE L+G + T+ LP L W PNEH D+TQA+ +D ++ R + D+ + I++ +
Sbjct: 161 KRDKRMFGALMGHLGAARQRLDRDKAVIDTQARLARSVADKQQQQSQQLRQLERELEQQRRNLDMARRAEAAGRVQVEERVAVTQLWLKAQEPLRGVLVTRALPPLTWLPNEHNDITQAMAQAQRAAVDDAMQARLDEDEDFARSIEEDI 310
BLAST of mRNA_Ecto-sp13_S_contig113.1152.1 vs. uniprot
Match: A0A7S2BBZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BBZ9_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.370e-9 Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 2
Query: 1433 AYKDGDTKKRNRRMFGGLMAHLGRARQQLDHDKSIIQRQKSVVEMAAIRQAQEKRQRRQTAENAAREERDEELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTKTLPKLAWSPN 1789
AY KKRNRRMFG LM HLG AR + D +I+++ V + + A+ + R+ + E+++ KRD I + ++T +++ +I Q++LK FI TKT P L W PN
Sbjct: 46 AYSGDAVKKRNRRMFGALMGHLGNARSAIKRDSKLIEQKAKVEQTVRNKNAESSVRIRKLERQMSISEKEKAFTKRDQILCQMRQTELSMLTEEWIQRQQKLKQFIGTKTEPVLFWMPN 164
BLAST of mRNA_Ecto-sp13_S_contig113.1152.1 vs. uniprot
Match: A0A7S0GT65_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GT65_9EUKA) HSP 1 Score: 67.4 bits (163), Expect = 8.450e-8 Identity = 47/135 (34.81%), Postives = 75/135 (55.56%), Query Frame = 2
Query: 1457 KRNRRMFGGLMAHLGRARQQLDHDKSIIQ--RQKSVVEMAAIRQAQEKRQRRQTAENAAREERDEELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTKTLPKLAWSPNEHTDVTQALLADSSKEIDGNIE 1855
KR+RR+FG LM HLG+A+ QLD + Q ++KS+ E R + + + + A+ A +++ + L RD I Q+K + L ++++L FI TKT P L W P +H + T+ LLA +E + IE
Sbjct: 179 KRDRRLFGMLMGHLGKAKSQLDRLRKSKQARKKKSMEEKVEARMVEVRHEAHEHAKRRAEKKKMKVLKNRDEILREQRKKHMLLLQLRLADHEKKLSNFIRTKTTPGLCWLPGKHNESTEKLLAKGREESEKRIE 313
BLAST of mRNA_Ecto-sp13_S_contig113.1152.1 vs. uniprot
Match: A0A4D9CWH8_9STRA (Pinin_SDK_memA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWH8_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 4.050e-7 Identity = 53/177 (29.94%), Postives = 92/177 (51.98%), Query Frame = 2
Query: 1400 MPEPSKPELHVAYKDGDTKKRNRRMFGGLMAHLGRARQQLDHD---KSIIQRQKSVVEMAAI--RQAQEKRQRRQTAENAAREERDEELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTKTLPKLAWSPNEHTDVTQALLADSSKEIDGNIERRKEADDKEFKEIDDSVAER 1915
+PE K E+ YK + +KR+RRMFG LM HLG A+ +L D I+++Q+ V+ + R+ EKR+ ++ E AA R E +R ++ RQ+ L + GFI T T P+L + P T+ + L+ + E++ + R++E D+ +E++ + E+
Sbjct: 173 LPEAEKGEVKEIYKTDEVQKRDRRMFGALMGHLGAAQARLRQDTGASGILKKQREVLTNVSEKDREMAEKRRAQKAEEQAA--ARRGEGKERAWLEVRQKTVEKELDCARYRDYWRAFSGFILTDTEPRLFYVPARMTEALEKLVEKTRGEMEAKVGRKEEEKDESVRELERAFREK 347
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 62.8 |
| Seed ortholog evalue | 9e-07 |
| Seed eggNOG ortholog | 227086.JGI_V11_73139 |
| Model size | 3909 |
| KEGG ko | ko:K13114 |
| KEGG Pathway | ko03013,ko03015,map03013,map03015 |
| KEGG Module | M00430 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000375,GO:0000377,GO:0000398,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005911,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007155,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0022610,GO:0030054,GO:0032991,GO:0034641,GO:0035145,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0071013,GO:0071704,GO:0090304,GO:1901360,GO:1902494,GO:1990904 |
| Exons | 9 |
| EggNOG free text desc. | RNA splicing |
| EggNOG OGs | KOG3756@1,KOG3756@2759 |
| Ec32 ortholog description | Pinin/SDK/MemA protein |
| Ec32 ortholog | Ec-28_001970.1 |
| Cds size | 2517 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03019,ko03041 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462590.8070672-UTR-Ecto-sp13_S_contig113:329..471 | 1681462590.8070672-UTR-Ecto-sp13_S_contig113:329..471 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig113 330..471 + |
| 1681462590.9026098-UTR-Ecto-sp13_S_contig113:8114..9364 | 1681462590.9026098-UTR-Ecto-sp13_S_contig113:8114..9364 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig113 8115..9364 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462590.8199391-CDS-Ecto-sp13_S_contig113:471..686 | 1681462590.8199391-CDS-Ecto-sp13_S_contig113:471..686 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig113 472..686 + |
| 1681462590.8303413-CDS-Ecto-sp13_S_contig113:1950..3063 | 1681462590.8303413-CDS-Ecto-sp13_S_contig113:1950..3063 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig113 1951..3063 + |
| 1681462590.8396094-CDS-Ecto-sp13_S_contig113:3492..3553 | 1681462590.8396094-CDS-Ecto-sp13_S_contig113:3492..3553 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig113 3493..3553 + |
| 1681462590.8492458-CDS-Ecto-sp13_S_contig113:3825..3927 | 1681462590.8492458-CDS-Ecto-sp13_S_contig113:3825..3927 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig113 3826..3927 + |
| 1681462590.860676-CDS-Ecto-sp13_S_contig113:4671..4797 | 1681462590.860676-CDS-Ecto-sp13_S_contig113:4671..4797 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig113 4672..4797 + |
| 1681462590.8688831-CDS-Ecto-sp13_S_contig113:5287..5338 | 1681462590.8688831-CDS-Ecto-sp13_S_contig113:5287..5338 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig113 5288..5338 + |
| 1681462590.8772502-CDS-Ecto-sp13_S_contig113:5809..5902 | 1681462590.8772502-CDS-Ecto-sp13_S_contig113:5809..5902 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig113 5810..5902 + |
| 1681462590.8852115-CDS-Ecto-sp13_S_contig113:6620..6761 | 1681462590.8852115-CDS-Ecto-sp13_S_contig113:6620..6761 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig113 6621..6761 + |
| 1681462590.8947868-CDS-Ecto-sp13_S_contig113:7499..8114 | 1681462590.8947868-CDS-Ecto-sp13_S_contig113:7499..8114 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig113 7500..8114 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig113.1152.1 >prot_Ecto-sp13_S_contig113.1152.1 ID=prot_Ecto-sp13_S_contig113.1152.1|Name=mRNA_Ecto-sp13_S_contig113.1152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=839bp
MDFDRNAIGSLEDVHREWDSLETERAKVEDKLRSFDAAAGGRGGGFGGRG VRVIGGGRGRDRSGGGDWRRDRPRDTSNGGREEAPHRPSQVSRDKYRAMS GTWERGLDPATAALDDDAPPEGRERGGGGTAGLRGGTKGSIAHYQRPADS HGDRRGRGRDRGVAPMHGAGVRGDRDGMRGDRTGDRDVFARGGRGGTRGD TARGDFDRFRNGGSGGRGGGSRARRESNGVGSGGGEPEAKRPRVTSTIVV AGDEDTIGDGTMENGELDRWNTELPPASPPPAAEAAVATDIAATTTTTPD DDLVDYEPEAEPEEDTASGPPPAAAAAAPPGEVTGQEGDQQPMEEDDGCG RRPVGKIVVVSGGGPRGRAANIGGVAGSGGGRGSLASRLGPPMGRPVMVK GGSGDNGGEGGFVPLSERPMPEPSKPELHVAYKDGDTKKRNRRMFGGLMA HLGRARQQLDHDKSIIQRQKSVVEMAAIRQAQEKRQRRQTAENAAREERD EELHKRDYIRARQQKTLVALHGNGFIANQEQLKGFIFTKTLPKLAWSPNE HTDVTQALLADSSKEIDGNIERRKEADDKEFKEIDDSVAERAATRASRRM AHAPGVRQMGVRQDMDANPHGEGNGHRWQMAAGESDTNGEGPGQAHTVAQ DDDDGNAGATEDIGGAPSMSQDVVDDGDQPGVAVSEADGGEGREMAGGAG DGMEVDGDDVGVATGLAEADDEEGQEGAEASPPRSLAPAAAVGGDLSTGE EENNGGCRGGGDVEKVGGGGGGSDGGGRVEGRTEAIVEAIGEEEVSRAGG GGDTDADEETKKKKKSSKKDRGSSSSGRKKSSRRSSDK* back to topmRNA from alignment at Ecto-sp13_S_contig113:330..9364+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig113.1152.1 ID=mRNA_Ecto-sp13_S_contig113.1152.1|Name=mRNA_Ecto-sp13_S_contig113.1152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9035bp|location=Sequence derived from alignment at Ecto-sp13_S_contig113:330..9364+ (Ectocarpus species13 EcNAP12_S_4_19m) GCCCGACTTATGGGGCCCAACTCTTGAGTGTCTTACCACCACCGCTGCTG
ATCGCAGAAGGACGGTGATTGCCCACTTGTCGCCTTGACGTGCTGCTGTT
AGATATAATCACGTATACCCGTATCTGGCTCATTTCAGCGTGATGGATTT
CGACCGGAATGCCATCGGATCTCTGGAGGACGTCCATCGGGAATGGGACA
GCCTCGAGACCGAGCGTGCCAAGGTGGAAGACAAGCTGCGGAGTTTCGAC
GCAGCGGCTGGGGGTAGGGGCGGTGGCTTTGGCGGGCGGGGGGTAAGGGT
TATTGGCGGCGGCAGGGGTAGGGACAGGAGTGGCGGGGGAGACTGGCGCA
GGGATAGGTGAGAGCACGACGGCAGCAGCACGGGTTCTACAGCTGTACGT
TGATGGACGTCGGTGTTGGTACCGGACGATGAACCAGATCCTACCCGCAC
GGGATGCAACACTCACACGTGCCTACTAGGAGCATGTGGCATGCTGTAAG
GCGGCACGTCGAAGCATCTTCGCGACCCTGGCCATGAAAACTAATGAGAG
GGCGGGCGAAACCTTATGTGTTCTTGGCGTCGATATTGATCCAAGATAAC
CACACACCCTTGTACAACGATCATCGCGATTGCCAAGCGGACATCCCTTT
GCATCCCAAGCGAAAGCTTCGCTTGCATGCTGACTCCGTACGTATTCCGA
AGCCTTAGTTATGCTCGGGGCTGCCCACTGCGCAGAGAGTCCGGGCGGTG
AGCTGACAGCAGTTCCCGAACTGCTGGTGCGTGGTTTCTGAAATCCGGTG
TCAGCCCAAATTGTTCGGACAAAGTGGTGCAATTGCCGGCTAGGATATAC
GAGTAAGACACGACGTGACAAGCCGAAATCTGCACAGGCCTGGAGATAAG
AAACATCAAATCGGGTCGAGGCTCAGTTTCGTCGTCACTGCTGTCGAGCG
CAGGTTGTTTCATAGAGTCTAGAAATTCGGCTGATGTGTGTTTCTGAACC
TTACCTTCTTGTTATAATGCGAGCATCTGTTTCTGAACAAAATATTTCTT
GATTGCGGGATCGTACTGCTGCATCTGTGTACGGACATGGGTCATGATCA
CTCTTACATGCACACGCACCACCGCCTCCTTAGCGGCAACGTTACACCTG
TGCGTTTGTAGTCGAACCGGGGTCAGGGTGAGTCGGGACAGGCAGGGATG
AATGTGTGCCGTGCACGCCCATCCCAGAGGACGGTTTGGTGCGGCTCTTG
CACGGAACGTGGCTCGTGTTGGTGTTGCTACCGGGTTGCCCTTACCCATC
TTGGGAACGAGTATGGTCGCTAAGATGCCGAGAGGTCGGCGGGAAAGTTC
GAGGGAAAATTCTGACGGTGGAAAACCAACGCCGCGGCCCGTGGCCCGTT
TCACGTTCCCCCGCATCCGGCCAGGAGGTCGTATTTTCTCCGCTCTCAGC
GCCCTGCTTCCCACCATCCCCCTACACGCGCACAGATGATCACCACCCTA
CACACCTGGTACGTGCGGCTGTGGTAAAGTTTCCCCGGCACACAAAAATG
TCGAACAAACGCACACATTGCGATGACTCTTATGCTCTTACCCCTGTCTT
TGTTCTTAAACTGTAACGCAGGCCCCGCGACACCAGCAATGGCGGTCGCG
AGGAGGCCCCGCACAGACCTTCCCAAGTATCGCGAGACAAGTACCGCGCG
ATGTCGGGTACGTGGGAGCGAGGGCTAGACCCTGCAACGGCTGCCCTGGA
CGATGACGCCCCGCCGGAAGGCAGGGAGAGGGGCGGCGGCGGGACAGCGG
GGCTTCGGGGAGGCACCAAGGGTTCCATCGCGCACTACCAACGCCCCGCA
GACAGCCACGGTGACAGGAGGGGACGGGGTAGAGACCGCGGCGTTGCTCC
AATGCATGGAGCTGGTGTGCGGGGAGACAGGGACGGTATGCGGGGCGATA
GGACCGGCGACAGGGACGTCTTCGCGCGGGGAGGACGAGGCGGAACGCGG
GGTGATACGGCGCGGGGAGACTTCGATCGGTTCAGGAACGGTGGCTCGGG
GGGACGAGGAGGAGGGTCGCGGGCACGCCGCGAGTCCAACGGCGTCGGGA
GTGGCGGCGGTGAGCCGGAAGCGAAGCGACCTCGGGTGACGAGCACGATC
GTCGTCGCGGGTGATGAGGACACCATCGGGGACGGGACGATGGAAAACGG
CGAGCTGGACCGTTGGAACACGGAGCTTCCCCCCGCATCGCCACCACCAG
CGGCAGAAGCTGCTGTCGCAACAGACATAGCAGCGACGACAACAACAACT
CCAGACGACGACCTCGTGGACTACGAGCCGGAGGCAGAACCGGAGGAGGA
CACCGCTAGCGGGCCTCCACCCGCCGCTGCCGCCGCCGCCCCCCCCGGCG
AGGTAACGGGCCAGGAAGGCGATCAGCAGCCCATGGAAGAGGACGACGGC
TGCGGGCGTAGGCCCGTCGGCAAGATCGTGGTCGTTTCGGGCGGCGGCCC
TAGAGGGCGCGCTGCCAACATCGGCGGCGTCGCCGGCAGCGGCGGCGGGC
GCGGGAGCCTGGCTAGCAGGTTGGGCCCTCCCATGGGGAGGCCGGTGATG
GTGAAAGGGGGTTCGGGGGACAACGGCGGGGAAGGGGGCTTTGTGCCTCT
GTCGGAGAGACCCATGCCGGAGCCCTCGAAGCCAGAGCTTCACGTGGCGT
ACAAGGACGGGGACACCAAGAAGCGAAACAGGAGGTGCTCCATATACCAT
AGAAATTCGCCCGCCGTTTTGCTGTTTGTTTTTGCCGGCGTCGCTGTTTC
GTTTTTTTTTTTGTTTCAAGAGCAGCGATTCAAGTGCTGCCTCATCCCCC
GAACACCCCACACCCCGCTTGGCCTCGTTGATACGCCTTCGAGGCTTACT
TTTTCAGGTTTGCTCCCTCGCGCTGTGGCCACGAGTGTCCCCTCACGGCA
TCCTTTCTCCCTCCGCCATGTGTGTCGCGCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGC
CCCCCCCGCCCCCCCCACACCTACCTTCCCCCCTCCCCCAAGGGCGGGGC
GCCCCCCCCCCCCCCCCCGTCTCACTTCCCGATGCGCCGTCTGCACCACC
ACCCCCATCTCAGGATGTTCGGTGGCCTCATGGCCCACCTCGGCCGAGCA
CGACAGCAGCTAGACCATGACAAGGTATGCCGCGTGATAGCGCCAGGTGC
ACAACGGAAGGGAAAATGACGGATTTTGATAAACATGCGGTAGCGCCGTC
GTTGCTACTGCTGTTGCCAGTATCGCGCATTTCCTCCCTGCTCCGACCTC
TCTGCTCCCTTTGGCATATTTTTTTCGTGCGTATTTTCCGATGGCGTACC
CGGCGTTACCGTTCCTTTTTCCGGTCTGTCTGATTTTGGGCGCGCGCGCG
TCGGGGGGGGGGGCGCCGTGGCATGACAACGGTCGAACGTGCACAGTCCA
TTATACAGCGGCAGAAGAGCGTTGTCGAGATGGCGGCGATCAGGCAGGCG
CAAGAGAAGAGGCAACGCCGACAGACGGCTGAAAATGCGGCTCGTGAGGT
GAGAGACCGGACGGGACAGGATGGCATGGAATGGCGATAGAATGGGATAG
GATGGGAAAGGATGAGATAGAATGGGATAGGATGAGACGGAACGAGGCTT
CTCGGTGTCATTTTATCGCAAGTACAGGGTCACGTTCCGCCCCGGAGGAA
TGTTCACCACTTTCCTTCTACAGTATTCAATACCTAATGGTAGCTCCTCT
TCTTCGTGCGTGAGAGCGTGGATGTGTGCAGCTGGCAATTGGAATGGACC
CCACCACGTGAAGGAGCGAAGAGCATCGCGTTTGTGTCGACGCGGTTGGT
GTTCCCCCCGCTGCTATGTGGCCCCGCTGTGACTCGAATTTGAAGTTTCA
CGTCGAGTGTCACCTTGCTCGGTGCTTTATTTTTGTCGCCCTTTATTGTC
GCGGCCCATTCCACCCCTGACGGGGGTCCCAATGCCGAAGAAAGGAGCTC
GTAGGTATTCAATAGGGGGAGAGTGGTGGGACATTTTCTTGGGGCGGGAC
GTGTCCCGATGTGTGCGACACTAGATCACGAGTTCTCAAGGAACAGCTTT
TGAGCCACCTGGGTCTGCAATTTTTTGCCTGTACATGTTCTCGATGCCCA
GAGAAACATTGTTGGTCATCATCCTGTACATGTTCTTTTTTTACTGGGAG
AAATGTGCCTGGCATCTGTCCTGCTTCTGAGTGTGCTCCTCCTTCGATTG
TGTGTGTGTGTGCGCGTGCGTGTGCTTGCGTCGAATCGGCAGGAGCGCGA
TGAGGAGCTGCACAAGCGCGACTACATCCGCGCGAGGCAGCAGAAGACCT
TGGTTGCTCTTCACGGAAACGGTTTCATCGCCAACCAGGAGCAGCTCAAG
GGGTTCATCTTCACAAAGGTATGCCTCACGACAGCGCCAGCAACATTGTA
GTACGGAAGCGTGCAGAGACTACCATGATTTGGCTTGAGGCAACCCGGCA
GCACGTTGACGGGAACACCGTAGGTAACCTTACGCAAGATTTCAGCCACC
CTGAACCTATTTCCAACGCTCGATTGCTCCACGCCAAAGAAGATGCCACC
GCTGAAAAAGTGCGCATTTTCGGCAAGCTGTCGACGGTAGATGTTTGCAG
CGTCACCATTTTCGGCACCGCCACTCTTTCTTCTGACGAGACCGCGACCT
TCGAAAATTGGTCAGGGTGTGTAGTCATCTTGTCACCTACTACGGTACCT
AGTGCCAATTGACTTGCCGTTGCCGTGTAGATCTCCACGTGTGCAGGCCG
AGCATTCATCACCGTGTTTCAACCCATACGCTGTACGCGCACGCCCCAGG
TCTGCTGCTCATCCTCCTCCCGCCTTGCCCGCCGTTTCCAATTTGTCGAC
TTTCGCAGACCCTGCCCAAGCTAGCTTGGTCACCCAACGAGCATACCGAC
GTTACCCAGGTGTGCCTTGTCGCGATTGGTTGCTGTTATTGACGCCGGTG
CCCCCGTCCTCCCCCCACCCGGTCGCGTCAATTTTTTTGTTTCTGTTTTG
CTTGGTTGTCCTGCTTATGGGGCTGGTGTAGACGAACAACGTGGGCCTTG
CCATTCTCTGTTTGTGTGCTTGATTTTTTGGGGGTAGCGTAGCTTTACTT
ATGGTAGCAACACCGAAGCGATTGAGCCAATCAAAACGGCCGATTCGTTT
GGTATTTCAGCACTTGATGCTTTTCGGAAAATCGAACCCTGTGTCTTTAA
TCCTTGTTTTTTTTTTACATCTATCTCGTGATGAGTATCCCGCCCTTTTA
GGAAGCTGCGCATGCCTGGCTGCGCATTGCTGCCTCTCTTTATGGTACCT
ATGTTGCCGTTTGCCGCTTTTTAACCGTTGCTGTGACGTTCTGTTTGCTC
CCTCCCATTTTCTCCCTCTCTCTTGCGCAGGCTCTGCTGGCAGACTCTAG
CAAGGAGATTGACGGTAACATCGAACGGAGGAAAGAGGCCGACGACAAGG
AGTTCAAGGAGATCGACGATTCGGTGAGTGGATCCCCCCCCCTCTCTGTC
TGTCTGTCTCTCTCCCTCTCCCTCTCTCCCGCTCTCCCTCTGCCTCTCTC
TCTCTCTCTCTCTCGCTCTCTTTCTCTGTCTCTCTGCCTCTGTCTCTCTA
TTTCTCTCTCTCCCTCACTGTCTGGCTGTCTCTGTCTCTGTCTCTGTCTC
TCTGTCTCCCTGTCTCTTTCCCTCCTTGTTCTGGAAAGTGCCGATTCTGT
CATGTGTGACGGATTCTTCCGAACAACAAGAAATATGTGGCGCTGACGAA
GTTCCACATTTTTTCGCAAAGGACACCTTCTTGTATTACTGCGTATACCA
GCCTGCTCCCCCTTCTAAACGGCAGAGAGGTCCTCCTCGAGCAGCTTCTT
CCTTACGCAACATGCCTACCAGCTCCCTCTCGCCGCCGCCCCGTCGTGGC
ACACGTATCACCTGCACGTAGGTTTCGATTCCACCTTTAGCCTTTCAACC
GCCTTTGGTCGCGGCGGCCACGCATGGATGGTGTACCTTTTTCTGACACC
GCTTGCGTTCTTGAAGCATTTCGTGCGGACTGAAAACGACCCGCCGTCGC
ACACAACTCCTAATCGAAAGGTATGCGGAGGTCGCAGGGTCCAATGGCTC
GGCAACCCCTCCCCCCCATGTGCCCAACGCCCCCCCCCCCCCCCCCCACC
CCCCCACCCCCATCTCTGCCGCCACCCTGCCGCCCCATCAGGTTGCAGAA
CGAGCCGCGACGCGGGCCAGCCGGAGGATGGCACACGCTCCGGGGGTGCG
GCAGATGGGGGTGCGGCAAGACATGGACGCTAACCCTCACGGAGAAGGCA
ACGGGCATCGCTGGCAGATGGCGGCGGGAGAGGTGAGCTTTTGCGCGGTC
GGGCTGAAAAGTGTTCGAGGAACTACTTTAATTGCCACCGTGTGTCTTTT
AGTCGCGTGTTTTTTTTTGTGTTGTACTTCTTTCCAGGAGTGATATCATA
CATCAGTGCACTCTTGAGGTTGGCGAGGAGCAGTTTCGTGCTTCGCATAT
GCTTTTTTGACGACGAAGAAAAGCGACATAAGAACGACGGTCGTTCTTGA
AGGGGGCTTGCGTTTGTGTGGCCTCTAGCCAGACTTCGTTTGAGTACAGA
CTATGGTAGATCAGGATAAAACCATGGGCACAGGGAAGCGCAGAGGTCTG
GAAGCCAGAGAAATGTCGCGGAAGTTTCTCGTGAGCGGAAGCTTGAAAAT
CGGCGGCGAGTATCGGATGGACCCATGACGAGCAGATTCAGATAACAGTG
CGCTGCGTAATAGGCGGGGCAACATGCAAGTTGTGCCCACCTTTTTCGTC
TCAACACCTGCACCTTTTATTGATGATGATGATGGTCTCGCGAGGGACGG
AACCGGCGCTGCGCCATCTGTGCTCGGGGATAGGATGATCTCCAATCCCT
TGACATTGAATCTTATGTTGCCATCAGTATGTGTCTTAGTGTCGTCCTTG
GTGGTGTGTGCCACCGTACTGGCGTTCGGCGATTCTCTCTCCCCCCTTCT
GCCTCTCGAGCGCCATCCCCTTCCACGATTTGTGCCGATCTGTTCTCCGC
ACGCACCCTTAACCCTCCAGAGTGACACAAATGGGGAGGGTCCCGGCCAA
GCCCACACGGTCGCTCAGGATGATGACGACGGCAATGCTGGTGCGACAGA
GGACATTGGCGGCGCCCCGTCCATGAGCCAAGACGTGGTCGATGATGGAG
ATCAGCCTGGGGTGGCGGTGTCGGAAGCAGACGGCGGCGAGGGCCGGGAA
ATGGCTGGCGGTGCCGGGGACGGGATGGAAGTGGACGGCGATGATGTTGG
CGTCGCCACCGGCTTGGCCGAGGCTGACGATGAAGAGGGACAGGAGGGAG
CGGAGGCATCTCCGCCCAGGAGCCTCGCACCTGCCGCCGCAGTAGGTGGT
GATTTGTCCACCGGGGAGGAGGAGAATAACGGTGGTTGTAGAGGCGGCGG
CGACGTGGAGAAGGTGGGCGGCGGCGGCGGCGGTAGTGATGGCGGCGGCA
GGGTGGAAGGCAGGACAGAAGCCATTGTCGAGGCGATTGGCGAGGAGGAG
GTGTCCCGGGCGGGCGGGGGCGGGGATACCGATGCCGATGAAGAAACGAA
GAAGAAGAAAAAGAGCAGCAAGAAGGACAGGGGGAGCAGCAGCAGCGGGC
GCAAGAAGTCTTCTCGGCGCAGCAGCGACAAGTAGCCCTAAAAGAGCGGG
CGTGTTGCGGTCGTGGGCGAGCGCCGGACAGGATATCCTGGACAAGTCCA
TCCGGCTGAACTCTATGTTGTTTCGTGTGTTTGTGTATCGACCGTGCTTA
CCGGCGGACCAACTAAAAGACGTCGGTCTTTCAGGAGCGGGATGTGTGTG
TTTGCTTGGCGCGTGTTGATTAAGTTTTTTTTTTATGCGGAAGTGAGGGG
ACGGGAAGAACGGAGGCGGCGCGCGCGGTTCGTGCCCTGGAGAGATGGAG
GAACCGAGTACTGTGACAGGATTTGCAGCGGTACGTATCACGGGTAGATG
AGCGGGGGCGGACGAGGTCGCTGAGCAGCAGTCCGGGGAACGCAGCGATT
CCACCTTTCTCCACAACGGGTTGGGTTTTGCCGTCGTTTGTCGTTTTCGG
GGCACAACCACCTGGGAACAAGTATTTCAGTGCGCTCGACAGCTACCTCT
TTCCGTTTAGAAAGGATTCGCTGCCTGGTGTGCTGCATTCGCCGTTAGGT
ACGTCAGCCCCGTTACCCGTGTCCAATGAGTCCAGGACGGAAGCCTGAGG
AGTTGAAATCGGAAGATTGCGGTGCGGTGGCGTGTTTGTCGGGTGCCGAT
GTGCCTCGGTTCTTTGATCGTAACAGAGTTTTGATCTCCGGTTGTCTTGG
CCCCGATAAAGAAGCTCTCGTGAGTCGACAGGCTAAACCGCAGGGTTCCA
TGGAAACTACTGCGTGCGAGTGGGAGAATATGGCGAAATCACTTACCAGG
AGACGTACAAATGTGGGTAGAGGTGGAGCTAGCTATAATTGCCGTTTCGG
CTTCGTATGAGGTCTTCCGTGAATCCCAAGGCGTGCTTAGTCCGTAGTTT
CCGGGCCGAGCGACAAGGGCTCCTTTTGCCTTTTGGATTGCACAGCGTTG
GTTCCTGGGCGATACGCAACCCGTCGTGGGTGTTGTCATCGCGACCATGC
ATGTAGAGCTTGCGTCGCGGGTTGAAGGTTTGAAGTAGTCCTGCAGTTAC
GCGGGAAAGTGATGTTGAAACCGCTACCCCGCGAGTAAAGTGGCAGGTTG
GGTTTGAACTGAGAACTGATCCTGCAGTTGCGCGGGAAAGTCACCTGAAA
ACGATCCACCGCGAGTAGGGAAACCGCCTGGTTTTCCCTTCCCACACTGT
GATGACTTGAGTTTGCAAGGCAGGCGATGTTATCGGGCTTCCGTTTGGGT
AAGGGAAATGCAAAAAAATACATTACTAATCTATC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig113:330..9364+ >mRNA_Ecto-sp13_S_contig113.1152.1 ID=mRNA_Ecto-sp13_S_contig113.1152.1|Name=mRNA_Ecto-sp13_S_contig113.1152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2517bp|location=Sequence derived from alignment at Ecto-sp13_S_contig113:330..9364+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGGATTTCGACCGGAATGCCATCGGATCTCTGGAGGACGTCCATCGGGA ATGGGACAGCCTCGAGACCGAGCGTGCCAAGGTGGAAGACAAGCTGCGGA GTTTCGACGCAGCGGCTGGGGGTAGGGGCGGTGGCTTTGGCGGGCGGGGG GTAAGGGTTATTGGCGGCGGCAGGGGTAGGGACAGGAGTGGCGGGGGAGA CTGGCGCAGGGATAGGCCCCGCGACACCAGCAATGGCGGTCGCGAGGAGG CCCCGCACAGACCTTCCCAAGTATCGCGAGACAAGTACCGCGCGATGTCG GGTACGTGGGAGCGAGGGCTAGACCCTGCAACGGCTGCCCTGGACGATGA CGCCCCGCCGGAAGGCAGGGAGAGGGGCGGCGGCGGGACAGCGGGGCTTC GGGGAGGCACCAAGGGTTCCATCGCGCACTACCAACGCCCCGCAGACAGC CACGGTGACAGGAGGGGACGGGGTAGAGACCGCGGCGTTGCTCCAATGCA TGGAGCTGGTGTGCGGGGAGACAGGGACGGTATGCGGGGCGATAGGACCG GCGACAGGGACGTCTTCGCGCGGGGAGGACGAGGCGGAACGCGGGGTGAT ACGGCGCGGGGAGACTTCGATCGGTTCAGGAACGGTGGCTCGGGGGGACG AGGAGGAGGGTCGCGGGCACGCCGCGAGTCCAACGGCGTCGGGAGTGGCG GCGGTGAGCCGGAAGCGAAGCGACCTCGGGTGACGAGCACGATCGTCGTC GCGGGTGATGAGGACACCATCGGGGACGGGACGATGGAAAACGGCGAGCT GGACCGTTGGAACACGGAGCTTCCCCCCGCATCGCCACCACCAGCGGCAG AAGCTGCTGTCGCAACAGACATAGCAGCGACGACAACAACAACTCCAGAC GACGACCTCGTGGACTACGAGCCGGAGGCAGAACCGGAGGAGGACACCGC TAGCGGGCCTCCACCCGCCGCTGCCGCCGCCGCCCCCCCCGGCGAGGTAA CGGGCCAGGAAGGCGATCAGCAGCCCATGGAAGAGGACGACGGCTGCGGG CGTAGGCCCGTCGGCAAGATCGTGGTCGTTTCGGGCGGCGGCCCTAGAGG GCGCGCTGCCAACATCGGCGGCGTCGCCGGCAGCGGCGGCGGGCGCGGGA GCCTGGCTAGCAGGTTGGGCCCTCCCATGGGGAGGCCGGTGATGGTGAAA GGGGGTTCGGGGGACAACGGCGGGGAAGGGGGCTTTGTGCCTCTGTCGGA GAGACCCATGCCGGAGCCCTCGAAGCCAGAGCTTCACGTGGCGTACAAGG ACGGGGACACCAAGAAGCGAAACAGGAGGATGTTCGGTGGCCTCATGGCC CACCTCGGCCGAGCACGACAGCAGCTAGACCATGACAAGTCCATTATACA GCGGCAGAAGAGCGTTGTCGAGATGGCGGCGATCAGGCAGGCGCAAGAGA AGAGGCAACGCCGACAGACGGCTGAAAATGCGGCTCGTGAGGAGCGCGAT GAGGAGCTGCACAAGCGCGACTACATCCGCGCGAGGCAGCAGAAGACCTT GGTTGCTCTTCACGGAAACGGTTTCATCGCCAACCAGGAGCAGCTCAAGG GGTTCATCTTCACAAAGACCCTGCCCAAGCTAGCTTGGTCACCCAACGAG CATACCGACGTTACCCAGGCTCTGCTGGCAGACTCTAGCAAGGAGATTGA CGGTAACATCGAACGGAGGAAAGAGGCCGACGACAAGGAGTTCAAGGAGA TCGACGATTCGGTTGCAGAACGAGCCGCGACGCGGGCCAGCCGGAGGATG GCACACGCTCCGGGGGTGCGGCAGATGGGGGTGCGGCAAGACATGGACGC TAACCCTCACGGAGAAGGCAACGGGCATCGCTGGCAGATGGCGGCGGGAG AGAGTGACACAAATGGGGAGGGTCCCGGCCAAGCCCACACGGTCGCTCAG GATGATGACGACGGCAATGCTGGTGCGACAGAGGACATTGGCGGCGCCCC GTCCATGAGCCAAGACGTGGTCGATGATGGAGATCAGCCTGGGGTGGCGG TGTCGGAAGCAGACGGCGGCGAGGGCCGGGAAATGGCTGGCGGTGCCGGG GACGGGATGGAAGTGGACGGCGATGATGTTGGCGTCGCCACCGGCTTGGC CGAGGCTGACGATGAAGAGGGACAGGAGGGAGCGGAGGCATCTCCGCCCA GGAGCCTCGCACCTGCCGCCGCAGTAGGTGGTGATTTGTCCACCGGGGAG GAGGAGAATAACGGTGGTTGTAGAGGCGGCGGCGACGTGGAGAAGGTGGG CGGCGGCGGCGGCGGTAGTGATGGCGGCGGCAGGGTGGAAGGCAGGACAG AAGCCATTGTCGAGGCGATTGGCGAGGAGGAGGTGTCCCGGGCGGGCGGG GGCGGGGATACCGATGCCGATGAAGAAACGAAGAAGAAGAAAAAGAGCAG CAAGAAGGACAGGGGGAGCAGCAGCAGCGGGCGCAAGAAGTCTTCTCGGC GCAGCAGCGACAAGTAG back to top
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