mRNA_Ecto-sp13_S_contig11298.1151.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: D7FUF5_ECTSI (Conserved oligomeric Golgi complex subunit 7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUF5_ECTSI) HSP 1 Score: 643 bits (1658), Expect = 8.610e-223 Identity = 344/374 (91.98%), Postives = 348/374 (93.05%), Query Frame = 1
Query: 1 SSLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALLTEVLRFVNQAMDLLRGASERDLIAVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLGGVTSAVERGGSAPAMTFTRRMEEV 1122
SSLD HLSTVATKLQAVSATINAGLEKSMVEIMVSVPR QLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTT SGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALLTEVLRFVNQA+DLLRGASERDL+AVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLGGVTSAVERGG+APAMTFTRRMEE+
Sbjct: 58 SSLDTHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRXXXXXXXXXXXXXXXXXXXXXXXXQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTSSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALLTEVLRFVNQAVDLLRGASERDLLAVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLGGVTSAVERGGTAPAMTFTRRMEEI 431
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A8J1Y7R4_OWEFU (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y7R4_OWEFU) HSP 1 Score: 100 bits (248), Expect = 3.510e-19 Identity = 64/234 (27.35%), Postives = 109/234 (46.58%), Query Frame = 1
Query: 4 SLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYL 705
S D + +T+ KLQ +N +E+ + + ++PRV+ E+D V + K L ++ + +E ++H +ETL +LD VK+ M D H L EA +W L V F D+ ++Q+L M S+ +L D+P+ EDR L L+ RLE +L P+L+ + Y ++ + R Y + A W + + + + WLP F + L
Sbjct: 30 SKDQYATTLVMKLQMFIQEVNNVIEEGSQQALQNMPRVLREIDAVTSEAKLLQDQMRAVKEDIEKVEHDTAQSMETLMKLDQVKSRMKDTSHALQEADNWTTLSANVEEVFQSQDISAISQKLVGMQQSLQMLVDVPDYEDRCNHLESLKNRLEAMLSPQLVAAFNTQSLESAQGYVQVFSDINRLQQLNKYYHKCQKAKLLDIWKKTVDENSDKS------MVEWLPGFYDQL 257
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A7M5TZH8_9CNID (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5TZH8_9CNID) HSP 1 Score: 95.1 bits (235), Expect = 9.470e-18 Identity = 61/234 (26.07%), Postives = 114/234 (48.72%), Query Frame = 1
Query: 4 SLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYL 705
S++ + S + KLQ ++ LE++ + ++PRV+ EV+ ++ L ++ + + ++ + ++ L +D VK M D + L EA W L E + SF + DL VA++L M S++VLKD+P+ +R L++ + +LE LL P L++I K + Y ++ QL R + Y + ++ K W + + +WLP F ++L
Sbjct: 30 SVENYASNLVMKLQLFIQEVSKSLEETSQVALNNIPRVLREVENIKIETSLLKNQMSMVKDDIRKVEENTASSMKKLVEIDGVKCRMQDACNALQEADKWTILSSEADESFERGDLNQVAEKLIGMQKSLEVLKDVPDYNERLKVLQNHKNKLEALLSPTLVQIFNKHDLDDARHYVELFAQLDRLPQLQLYYNNCHKSSLFKTWRSVREDPNKP-------MTSWLPIFFDHL 256
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: UPI0015AE77E7 (conserved oligomeric Golgi complex subunit 7-like isoform X1 n=4 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AE77E7) HSP 1 Score: 92.0 bits (227), Expect = 1.680e-16 Identity = 49/188 (26.06%), Postives = 101/188 (53.72%), Query Frame = 1
Query: 25 TVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRM--GPLMEYAAMYRQLGRTDVFRAEY 582
T+ KLQ+ +N LEK+ ++ ++PR+ E++ ++ K L ++ ++ G + ++H A+ ++TL ++D VK+ M + L EA +W L +V F D+ +A +L M S+++L D+P+ ++R L +L++RLE ++ P+L+ + + Y +++ L R + Y
Sbjct: 36 TIVAKLQSFIQEVNISLEKTAEQVNQNIPRIAREIEVMQNEAKLLQHQMNSVKGDVMKVEHDASQAMQTLLKIDHVKSCMQEASKALREADNWTTLSADVEEIFDSGDINAIAMKLVGMQNSLEILADVPDYQERCFRLENLKDRLEAMISPRLIAAFNTQSLVTDVALMYMKIFKDLRRLSTLQKHY 223
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A5D6Y780_9STRA (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y780_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.380e-16 Identity = 69/249 (27.71%), Postives = 114/249 (45.78%), Query Frame = 1
Query: 232 LARLDLVKTNMGDCLHTLTEAASWNALVR-------EVNASFGQD--DLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMG--PLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAA-PWTEAVALLTEVLRFVNQAMDLLRGASERDLIA 942
L L K + C L EAA W VR ++ + G D +A R+ M S+ VL+++P A+DR AT++ L R+E L P LL ++++D + + A++R + R DV RA +C+++ + AH+ WFA + + WL F ++ L E + ++FG ++P VL L+ F L GSF + L + + ++ F Q L R E +A
Sbjct: 117 LVALHDAKQRLQACSQALVEAAKWEKNVRLCTAAADDIATALGDTGGDALPLADRVHEMRRSLAVLRELPGADDRRATMQALCARVEAALTPALLTLLREDPLAVAKVQRARAIFRSVDRADVVRAHFCASRLSHAHRVWFAFSAPEHD--------FSAWLAVFYSEVRALLQRESRHAREIFGAASAPGVLAALLQATFAALRGSFDERLRHNFRMQQLLRAFSQSAAFAAQTAQLFRALRESQRLA 357
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: K3WFF3_GLOUD (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFF3_GLOUD) HSP 1 Score: 86.7 bits (213), Expect = 1.130e-14 Identity = 81/332 (24.40%), Postives = 153/332 (46.08%), Query Frame = 1
Query: 16 HLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGAN---AH--------VETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLK------------GVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGP--LMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALLTEVLR-------FVNQAMDLLR 915
L+ + +L +S ++ + ++ ++ V+ P++ ++V+ ++ A+ L +L + + D A+ +H ++ L L K + C L EAA W VR A+ + D+ +A R+ M S++VL +MP A+DR AT++ L ++E L PKL+ ++++ + + A++ + R + R EYC + A H+ WFA SS ++ ++ A+WL F + L E ++FG ++ VL L+ F + SFQ L + + + + T +LR F Q + LLR
Sbjct: 33 ELAPLVPQLALLSQSLTRSVHATLHQLTVTGPQLQSQVEALQTAMLPLKAQLDTVVAHVGDSDASASWSTSHRKKEDARALQHLVTLHDAKQKLQACSQALVEAAKWEKNVRACFAAVEEPDVGTASLPSKEDGALSLADRVREMHTSLEVLHEMPGADDRHATMQTLCAQIEARLTPKLIAYLREEHVPVTRVQTCLAIFTSIHRDAIVRDEYCKGRPAHVHRVWFA--YSSENDDASSAESFADWLEGFYSDVYVMLQRESHHIREIFGTESVAKVLVVLLQSTFSSIRASFQDRLTTSSASSSDTMTT-LLRSFQSSTAFATQVVQLLR 361
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: K1PJJ5_CRAGI (Conserved oligomeric Golgi complex subunit 7 n=4 Tax=Crassostrea TaxID=6564 RepID=K1PJJ5_CRAGI) HSP 1 Score: 84.7 bits (208), Expect = 4.410e-14 Identity = 66/267 (24.72%), Postives = 120/267 (44.94%), Query Frame = 1
Query: 10 DAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPL 810
D + +T+ KLQ +N +E++ + + ++PRV+ E+D V+ L ++ + ++ ++H ++TL +LD +K+ M L EA +W L +V F D+K + +L+ M S+ +L D P+ DR L L+ RLE +L P+L++ + Y ++ TD+ R HK A + E + L WL + + L + E K +F D P ++C L+ + L
Sbjct: 52 DQYATTLVMKLQMFIQEVNNIIEETSQQAVQNLPRVIRELDAVKQEAALLQDQMKMVKQDIQKVEHDTAKSMQTLLKLDAIKSRMTSAAEALREADNWTTLSSDVEEVFQSQDIKAITLKLKGMQNSLLMLVDTPDYADRCQHLETLKNRLEAVLSPQLVQAFTTQSLETAQTYTQIF-----TDIDRVPQLYKYYTRCHKVTLLGAWKNIIEANADDT-LKEWLTEYYDLLLSTWHAEMKWCKQVFP-DPLP-IVCDLIKETLESL 310
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: UPI001E1E058E (conserved oligomeric Golgi complex subunit 7-like isoform X1 n=5 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E058E) HSP 1 Score: 84.3 bits (207), Expect = 5.890e-14 Identity = 58/262 (22.14%), Postives = 119/262 (45.42%), Query Frame = 1
Query: 4 SLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLV 789
S D + +T+ KLQ +N +E++ + + ++PRV+ E++ V+ L +++ + ++ ++H ++TL +LD +K+ M L EA +W L +V F D++ + +L M S+ +L D P+ +R L L+ RLE +L P+L+ + + +++ + R Y + + W ++ + L W+ ++L + + K +F D P V+CQL+
Sbjct: 30 SKDQYATTLVMKLQMFIQEVNNVIEEASQQAIQNLPRVMREIEAVKQEASLLQDQMVVVKHDIQKVEHDTAQSMQTLLKLDSIKSRMTSAADALKEADNWTTLSADVEDVFQSQDIEAITSKLSGMQQSLQMLVDTPDYGERCQHLEKLKNRLEAMLSPQLMSAFNAQSIEAAQMFTTIFKSIDRLPQLYKFYNTCHKGTLLQSWKTLLETNADDS------LVEWMNQLYDHLLSTWHSQMKWCGQIFP-DPMP-VVCQLI 283
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A388LFB3_CHABU (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LFB3_CHABU) HSP 1 Score: 82.8 bits (203), Expect = 1.990e-13 Identity = 80/296 (27.03%), Postives = 132/296 (44.59%), Query Frame = 1
Query: 7 LDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWF----------ASATSSGSEGGTTGSGLA--------NWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEA 840
+D +LS + TKLQ ++ I AGLE++ ++ +PR + EV R++ +L G + L +LE + + V LA++D VK M TL +AA L V F DL VA+ L M + V+ +PE L L++RLET+++P+L E + ++ + + +GR +Y + K W AS +E G GSG+A +WLP F + + E K S F + +L +L++ + SF ++A
Sbjct: 32 VDKYLSEIETKLQLLAEDIAAGLEETSSHALLRLPRAIREVHRLKDDALSLRGTVGGLLRRLEKAEGKSAQSVSRLAQIDGVKQRMATARDTLQDAAGLAQLSASVEEVFASGDLPRVAETLGQMRRCLAVVGQVPEFTAVKLQLVSLEDRLETMVQPRLSEALSARKVDAVQALRDILLMIGRYSSLEQQYTRVRVKPLKKVWDELDSSAKALKASGNHHLAEVGNEGSGMAGVAEGSILDWLPRFYDEVLLFFEQEVKWCSTTFP-EEHVRLLPKLLMEVMMTISQSFTARIDA 326
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A2D4BYY3_PYTIN (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYY3_PYTIN) HSP 1 Score: 80.5 bits (197), Expect = 1.140e-12 Identity = 100/424 (23.58%), Postives = 172/424 (40.57%), Query Frame = 1
Query: 37 KLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLES-IDHGANAH-----------VETLARLDLVKTNMGDCLHTLTEAASWNALVR---------------------------EVNASFGQDD---LKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRM--GPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAP-----WTEAVALLTEVLRFVNQAMDLLRGASERDLIAVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLGGVTSAVERGGS---------APAMTFTRRMEEVDYSI 1134
+L +S ++ + S+ ++ V+ P++ E+D ++ L L ++ + S GA+ +E L L KT + C L EAA W VR V AS D +A R+ M S+++LKDMP A+DR TL L ++ET LKP+L +++ + P+ A++R +GR D YC T+ A H+ WF+ + SS + L++WL SF S + + +P +L +L+ ++PL SF++ L + E + F + A RGA+ D +A S + + G R+ +L Q L+ +T +++ G A F RR+E+ ++
Sbjct: 6 QLSLLSQSLTTSIHSSLHQLSVTGPQLQAELDALQRVSAPLAQHLETVTSAMSSDASSGASRRRHRESPDEQRELEHLLTLHDTKTRLLSCSKALVEAARWEKNVRACALAIESSLDGVVTPLRRHSRSRSGSSVVASGSTSDEASAPSLADRVNEMHKSLEILKDMPGADDRQRTLDRLCAQIETALKPQLEGFLQETPLPVAPIQASLAVFRSIGRADFVSQAYCRTRPAQLHRLWFSYSASSEDD-----KRLSSWLESFYGETTTSTTETTSR---------APCLL-ELLXNVWRPLHDSFRERLRKSDAGGXGMEELLRAFQRAXAFASXAGRXXRGAAAADDVASD-DKPSQLAVXRAVPGLCSRALEALATQQLMSAFSAMTPSMQNVGDDDDAGDDAVARVDAFARRLEDSSSTL 413 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11298.1151.1 >prot_Ecto-sp13_S_contig11298.1151.1 ID=prot_Ecto-sp13_S_contig11298.1151.1|Name=mRNA_Ecto-sp13_S_contig11298.1151.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=380bp SSLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIback to top mRNA from alignment at Ecto-sp13_S_contig11298:422..5234+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11298.1151.1 ID=mRNA_Ecto-sp13_S_contig11298.1151.1|Name=mRNA_Ecto-sp13_S_contig11298.1151.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11298:422..5234+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11298:422..5234+ >mRNA_Ecto-sp13_S_contig11298.1151.1 ID=mRNA_Ecto-sp13_S_contig11298.1151.1|Name=mRNA_Ecto-sp13_S_contig11298.1151.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1140bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11298:422..5234+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |