mRNA_Ecto-sp13_S_contig11298.1151.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11298.1151.1
Unique NamemRNA_Ecto-sp13_S_contig11298.1151.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: D7FUF5_ECTSI (Conserved oligomeric Golgi complex subunit 7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUF5_ECTSI)

HSP 1 Score: 643 bits (1658), Expect = 8.610e-223
Identity = 344/374 (91.98%), Postives = 348/374 (93.05%), Query Frame = 1
Query:    1 SSLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALLTEVLRFVNQAMDLLRGASERDLIAVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLGGVTSAVERGGSAPAMTFTRRMEEV 1122
            SSLD HLSTVATKLQAVSATINAGLEKSMVEIMVSVPR                        QLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTT SGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALLTEVLRFVNQA+DLLRGASERDL+AVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLGGVTSAVERGG+APAMTFTRRMEE+
Sbjct:   58 SSLDTHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRXXXXXXXXXXXXXXXXXXXXXXXXQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTSSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALLTEVLRFVNQAVDLLRGASERDLLAVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLGGVTSAVERGGTAPAMTFTRRMEEI 431          
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A8J1Y7R4_OWEFU (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y7R4_OWEFU)

HSP 1 Score: 100 bits (248), Expect = 3.510e-19
Identity = 64/234 (27.35%), Postives = 109/234 (46.58%), Query Frame = 1
Query:    4 SLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYL 705
            S D + +T+  KLQ     +N  +E+   + + ++PRV+ E+D V +  K L  ++  +   +E ++H     +ETL +LD VK+ M D  H L EA +W  L   V   F   D+  ++Q+L  M  S+ +L D+P+ EDR   L  L+ RLE +L P+L+       +     Y  ++  + R       Y   + A     W  +   +  +       +  WLP F + L
Sbjct:   30 SKDQYATTLVMKLQMFIQEVNNVIEEGSQQALQNMPRVLREIDAVTSEAKLLQDQMRAVKEDIEKVEHDTAQSMETLMKLDQVKSRMKDTSHALQEADNWTTLSANVEEVFQSQDISAISQKLVGMQQSLQMLVDVPDYEDRCNHLESLKNRLEAMLSPQLVAAFNTQSLESAQGYVQVFSDINRLQQLNKYYHKCQKAKLLDIWKKTVDENSDKS------MVEWLPGFYDQL 257          
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A7M5TZH8_9CNID (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5TZH8_9CNID)

HSP 1 Score: 95.1 bits (235), Expect = 9.470e-18
Identity = 61/234 (26.07%), Postives = 114/234 (48.72%), Query Frame = 1
Query:    4 SLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYL 705
            S++ + S +  KLQ     ++  LE++    + ++PRV+ EV+ ++     L  ++  +   +  ++    + ++ L  +D VK  M D  + L EA  W  L  E + SF + DL  VA++L  M  S++VLKD+P+  +R   L++ + +LE LL P L++I  K  +     Y  ++ QL R    +  Y +   ++  K W +               + +WLP F ++L
Sbjct:   30 SVENYASNLVMKLQLFIQEVSKSLEETSQVALNNIPRVLREVENIKIETSLLKNQMSMVKDDIRKVEENTASSMKKLVEIDGVKCRMQDACNALQEADKWTILSSEADESFERGDLNQVAEKLIGMQKSLEVLKDVPDYNERLKVLQNHKNKLEALLSPTLVQIFNKHDLDDARHYVELFAQLDRLPQLQLYYNNCHKSSLFKTWRSVREDPNKP-------MTSWLPIFFDHL 256          
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: UPI0015AE77E7 (conserved oligomeric Golgi complex subunit 7-like isoform X1 n=4 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AE77E7)

HSP 1 Score: 92.0 bits (227), Expect = 1.680e-16
Identity = 49/188 (26.06%), Postives = 101/188 (53.72%), Query Frame = 1
Query:   25 TVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRM--GPLMEYAAMYRQLGRTDVFRAEY 582
            T+  KLQ+    +N  LEK+  ++  ++PR+  E++ ++   K L  ++ ++ G +  ++H A+  ++TL ++D VK+ M +    L EA +W  L  +V   F   D+  +A +L  M  S+++L D+P+ ++R   L +L++RLE ++ P+L+       +     + Y  +++ L R    +  Y
Sbjct:   36 TIVAKLQSFIQEVNISLEKTAEQVNQNIPRIAREIEVMQNEAKLLQHQMNSVKGDVMKVEHDASQAMQTLLKIDHVKSCMQEASKALREADNWTTLSADVEEIFDSGDINAIAMKLVGMQNSLEILADVPDYQERCFRLENLKDRLEAMISPRLIAAFNTQSLVTDVALMYMKIFKDLRRLSTLQKHY 223          
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A5D6Y780_9STRA (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y780_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.380e-16
Identity = 69/249 (27.71%), Postives = 114/249 (45.78%), Query Frame = 1
Query:  232 LARLDLVKTNMGDCLHTLTEAASWNALVR-------EVNASFGQD--DLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMG--PLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAA-PWTEAVALLTEVLRFVNQAMDLLRGASERDLIA 942
            L  L   K  +  C   L EAA W   VR       ++  + G    D   +A R+  M  S+ VL+++P A+DR AT++ L  R+E  L P LL ++++D +    +    A++R + R DV RA +C+++ + AH+ WFA +              + WL  F   ++  L  E +   ++FG  ++P VL  L+   F  L GSF + L       + +   ++   F  Q   L R   E   +A
Sbjct:  117 LVALHDAKQRLQACSQALVEAAKWEKNVRLCTAAADDIATALGDTGGDALPLADRVHEMRRSLAVLRELPGADDRRATMQALCARVEAALTPALLTLLREDPLAVAKVQRARAIFRSVDRADVVRAHFCASRLSHAHRVWFAFSAPEHD--------FSAWLAVFYSEVRALLQRESRHAREIFGAASAPGVLAALLQATFAALRGSFDERLRHNFRMQQLLRAFSQSAAFAAQTAQLFRALRESQRLA 357          
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: K3WFF3_GLOUD (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFF3_GLOUD)

HSP 1 Score: 86.7 bits (213), Expect = 1.130e-14
Identity = 81/332 (24.40%), Postives = 153/332 (46.08%), Query Frame = 1
Query:   16 HLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGAN---AH--------VETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLK------------GVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGP--LMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALLTEVLR-------FVNQAMDLLR 915
             L+ +  +L  +S ++   +  ++ ++ V+ P++ ++V+ ++ A+  L  +L  +   +   D  A+   +H        ++ L  L   K  +  C   L EAA W   VR   A+  + D+              +A R+  M  S++VL +MP A+DR AT++ L  ++E  L PKL+  ++++ +    +    A++  + R  + R EYC  + A  H+ WFA   SS ++  ++    A+WL  F   +   L  E     ++FG ++   VL  L+   F  +  SFQ  L  +  + +  + T +LR       F  Q + LLR
Sbjct:   33 ELAPLVPQLALLSQSLTRSVHATLHQLTVTGPQLQSQVEALQTAMLPLKAQLDTVVAHVGDSDASASWSTSHRKKEDARALQHLVTLHDAKQKLQACSQALVEAAKWEKNVRACFAAVEEPDVGTASLPSKEDGALSLADRVREMHTSLEVLHEMPGADDRHATMQTLCAQIEARLTPKLIAYLREEHVPVTRVQTCLAIFTSIHRDAIVRDEYCKGRPAHVHRVWFA--YSSENDDASSAESFADWLEGFYSDVYVMLQRESHHIREIFGTESVAKVLVVLLQSTFSSIRASFQDRLTTSSASSSDTMTT-LLRSFQSSTAFATQVVQLLR 361          
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: K1PJJ5_CRAGI (Conserved oligomeric Golgi complex subunit 7 n=4 Tax=Crassostrea TaxID=6564 RepID=K1PJJ5_CRAGI)

HSP 1 Score: 84.7 bits (208), Expect = 4.410e-14
Identity = 66/267 (24.72%), Postives = 120/267 (44.94%), Query Frame = 1
Query:   10 DAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPL 810
            D + +T+  KLQ     +N  +E++  + + ++PRV+ E+D V+     L  ++  +   ++ ++H     ++TL +LD +K+ M      L EA +W  L  +V   F   D+K +  +L+ M  S+ +L D P+  DR   L  L+ RLE +L P+L++      +     Y  ++     TD+ R           HK     A  +  E     + L  WL  + + L  +   E K    +F  D  P ++C L+    + L
Sbjct:   52 DQYATTLVMKLQMFIQEVNNIIEETSQQAVQNLPRVIRELDAVKQEAALLQDQMKMVKQDIQKVEHDTAKSMQTLLKLDAIKSRMTSAAEALREADNWTTLSSDVEEVFQSQDIKAITLKLKGMQNSLLMLVDTPDYADRCQHLETLKNRLEAVLSPQLVQAFTTQSLETAQTYTQIF-----TDIDRVPQLYKYYTRCHKVTLLGAWKNIIEANADDT-LKEWLTEYYDLLLSTWHAEMKWCKQVFP-DPLP-IVCDLIKETLESL 310          
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: UPI001E1E058E (conserved oligomeric Golgi complex subunit 7-like isoform X1 n=5 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E058E)

HSP 1 Score: 84.3 bits (207), Expect = 5.890e-14
Identity = 58/262 (22.14%), Postives = 119/262 (45.42%), Query Frame = 1
Query:    4 SLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLV 789
            S D + +T+  KLQ     +N  +E++  + + ++PRV+ E++ V+     L  +++ +   ++ ++H     ++TL +LD +K+ M      L EA +W  L  +V   F   D++ +  +L  M  S+ +L D P+  +R   L  L+ RLE +L P+L+       +     +  +++ + R       Y +       + W     ++  +       L  W+    ++L  +   + K    +F  D  P V+CQL+
Sbjct:   30 SKDQYATTLVMKLQMFIQEVNNVIEEASQQAIQNLPRVMREIEAVKQEASLLQDQMVVVKHDIQKVEHDTAQSMQTLLKLDSIKSRMTSAADALKEADNWTTLSADVEDVFQSQDIEAITSKLSGMQQSLQMLVDTPDYGERCQHLEKLKNRLEAMLSPQLMSAFNAQSIEAAQMFTTIFKSIDRLPQLYKFYNTCHKGTLLQSWKTLLETNADDS------LVEWMNQLYDHLLSTWHSQMKWCGQIFP-DPMP-VVCQLI 283          
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A388LFB3_CHABU (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LFB3_CHABU)

HSP 1 Score: 82.8 bits (203), Expect = 1.990e-13
Identity = 80/296 (27.03%), Postives = 132/296 (44.59%), Query Frame = 1
Query:    7 LDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAASWNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWF----------ASATSSGSEGGTTGSGLA--------NWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEA 840
            +D +LS + TKLQ ++  I AGLE++    ++ +PR + EV R++    +L G +  L  +LE  +  +   V  LA++D VK  M     TL +AA    L   V   F   DL  VA+ L  M   + V+  +PE       L  L++RLET+++P+L E +   ++  +     +   +GR      +Y   +     K W           AS     +E G  GSG+A        +WLP F + +      E K  S  F  +    +L +L++     +  SF   ++A
Sbjct:   32 VDKYLSEIETKLQLLAEDIAAGLEETSSHALLRLPRAIREVHRLKDDALSLRGTVGGLLRRLEKAEGKSAQSVSRLAQIDGVKQRMATARDTLQDAAGLAQLSASVEEVFASGDLPRVAETLGQMRRCLAVVGQVPEFTAVKLQLVSLEDRLETMVQPRLSEALSARKVDAVQALRDILLMIGRYSSLEQQYTRVRVKPLKKVWDELDSSAKALKASGNHHLAEVGNEGSGMAGVAEGSILDWLPRFYDEVLLFFEQEVKWCSTTFP-EEHVRLLPKLLMEVMMTISQSFTARIDA 326          
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Match: A0A2D4BYY3_PYTIN (Conserved oligomeric Golgi complex subunit 7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYY3_PYTIN)

HSP 1 Score: 80.5 bits (197), Expect = 1.140e-12
Identity = 100/424 (23.58%), Postives = 172/424 (40.57%), Query Frame = 1
Query:   37 KLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAIKTLNGELINLSGQLES-IDHGANAH-----------VETLARLDLVKTNMGDCLHTLTEAASWNALVR---------------------------EVNASFGQDD---LKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDLQERLETLLKPKLLEIVKKDRM--GPLMEYAAMYRQLGRTDVFRAEYCSTKAAAAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLFGGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAP-----WTEAVALLTEVLRFVNQAMDLLRGASERDLIAVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLGGVTSAVERGGS---------APAMTFTRRMEEVDYSI 1134
            +L  +S ++   +  S+ ++ V+ P++  E+D ++     L   L  ++  + S    GA+             +E L  L   KT +  C   L EAA W   VR                            V AS    D      +A R+  M  S+++LKDMP A+DR  TL  L  ++ET LKP+L   +++  +   P+    A++R +GR D     YC T+ A  H+ WF+ + SS  +       L++WL SF      S  +   +         +P +L +L+   ++PL  SF++ L  +        E +        F + A    RGA+  D +A      S   + +   G   R+  +L  Q L+     +T +++  G          A    F RR+E+   ++
Sbjct:    6 QLSLLSQSLTTSIHSSLHQLSVTGPQLQAELDALQRVSAPLAQHLETVTSAMSSDASSGASRRRHRESPDEQRELEHLLTLHDTKTRLLSCSKALVEAARWEKNVRACALAIESSLDGVVTPLRRHSRSRSGSSVVASGSTSDEASAPSLADRVNEMHKSLEILKDMPGADDRQRTLDRLCAQIETALKPQLEGFLQETPLPVAPIQASLAVFRSIGRADFVSQAYCRTRPAQLHRLWFSYSASSEDD-----KRLSSWLESFYGETTTSTTETTSR---------APCLL-ELLXNVWRPLHDSFRERLRKSDAGGXGMEELLRAFQRAXAFASXAGRXXRGAAAADDVASD-DKPSQLAVXRAVPGLCSRALEALATQQLMSAFSAMTPSMQNVGDDDDAGDDAVARVDAFARRLEDSSSTL 413          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11298.1151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUF5_ECTSI8.610e-22391.98Conserved oligomeric Golgi complex subunit 7 n=2 T... [more]
A0A8J1Y7R4_OWEFU3.510e-1927.35Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
A0A7M5TZH8_9CNID9.470e-1826.07Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
UPI0015AE77E71.680e-1626.06conserved oligomeric Golgi complex subunit 7-like ... [more]
A0A5D6Y780_9STRA3.380e-1627.71Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
K3WFF3_GLOUD1.130e-1424.40Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
K1PJJ5_CRAGI4.410e-1424.72Conserved oligomeric Golgi complex subunit 7 n=4 T... [more]
UPI001E1E058E5.890e-1422.14conserved oligomeric Golgi complex subunit 7-like ... [more]
A0A388LFB3_CHABU1.990e-1327.03Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]
A0A2D4BYY3_PYTIN1.140e-1223.58Conserved oligomeric Golgi complex subunit 7 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11298contigEcto-sp13_S_contig11298:422..5234 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score648.3
Seed ortholog evalue2.3e-183
Seed eggNOG ortholog2880.D7FUF5
Preferred nameCOG7
Model size1140
KEGG koko:K10878,ko:K17586,ko:K20294
KEGG Pathwayko04113,map04113
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000280,GO:0000910,GO:0000916,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005794,GO:0005802,GO:0006464,GO:0006486,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006890,GO:0006891,GO:0006996,GO:0007010,GO:0007030,GO:0007049,GO:0007112,GO:0007140,GO:0007276,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010256,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0017119,GO:0019538,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0030029,GO:0030036,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031647,GO:0031974,GO:0031981,GO:0031984,GO:0032501,GO:0032504,GO:0032506,GO:0032588,GO:0032991,GO:0033036,GO:0033206,GO:0033365,GO:0034067,GO:0034613,GO:0034645,GO:0036063,GO:0036211,GO:0036213,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044837,GO:0045184,GO:0046907,GO:0048193,GO:0048232,GO:0048285,GO:0048609,GO:0050821,GO:0051179,GO:0051234,GO:0051301,GO:0051321,GO:0051641,GO:0051649,GO:0051704,GO:0061640,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0098588,GO:0098791,GO:0099023,GO:0140013,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903046
Exons7
EggNOG free text desc.retrograde vesicle-mediated transport, Golgi to ER
EggNOG OGsKOG4182@1,KOG4182@2759
Cds size1140
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03400,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11298.1151.1prot_Ecto-sp13_S_contig11298.1151.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11298 422..5234 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462590.646859-CDS-Ecto-sp13_S_contig11298:421..6101681462590.646859-CDS-Ecto-sp13_S_contig11298:421..610Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11298 422..610 +
1681462590.6590948-CDS-Ecto-sp13_S_contig11298:1254..13971681462590.6590948-CDS-Ecto-sp13_S_contig11298:1254..1397Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11298 1255..1397 +
1681462590.670919-CDS-Ecto-sp13_S_contig11298:2164..23241681462590.670919-CDS-Ecto-sp13_S_contig11298:2164..2324Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11298 2165..2324 +
1681462590.68529-CDS-Ecto-sp13_S_contig11298:2919..31351681462590.68529-CDS-Ecto-sp13_S_contig11298:2919..3135Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11298 2920..3135 +
1681462590.6981447-CDS-Ecto-sp13_S_contig11298:3887..40041681462590.6981447-CDS-Ecto-sp13_S_contig11298:3887..4004Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11298 3888..4004 +
1681462590.7106056-CDS-Ecto-sp13_S_contig11298:4379..45401681462590.7106056-CDS-Ecto-sp13_S_contig11298:4379..4540Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11298 4380..4540 +
1681462590.7213163-CDS-Ecto-sp13_S_contig11298:5080..52341681462590.7213163-CDS-Ecto-sp13_S_contig11298:5080..5234Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11298 5081..5234 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11298.1151.1

>prot_Ecto-sp13_S_contig11298.1151.1 ID=prot_Ecto-sp13_S_contig11298.1151.1|Name=mRNA_Ecto-sp13_S_contig11298.1151.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=380bp
SSLDAHLSTVATKLQAVSATINAGLEKSMVEIMVSVPRVVTEVDRVEAAI
KTLNGELINLSGQLESIDHGANAHVETLARLDLVKTNMGDCLHTLTEAAS
WNALVREVNASFGQDDLKGVAQRLEAMAGSMDVLKDMPEAEDRAATLRDL
QERLETLLKPKLLEIVKKDRMGPLMEYAAMYRQLGRTDVFRAEYCSTKAA
AAHKRWFASATSSGSEGGTTGSGLANWLPSFLEYLQGSLMDERKKTSDLF
GGDTSPAVLCQLVVVAFQPLLGSFQKHLEAAPWTEAVALLTEVLRFVNQA
MDLLRGASERDLIAVLLSSTSGFRLIQDSFGAHERSFLSLELQPLLETLG
GVTSAVERGGSAPAMTFTRRMEEVDYSID*
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mRNA from alignment at Ecto-sp13_S_contig11298:422..5234+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11298.1151.1 ID=mRNA_Ecto-sp13_S_contig11298.1151.1|Name=mRNA_Ecto-sp13_S_contig11298.1151.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11298:422..5234+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCAGCCTAGACGCGCACCTGTCCACCGTAGCGACCAAGCTGCAGGCGGT GTCCGCGACCATCAACGCGGGGCTCGAGAAGAGCATGGTGGAGATCATGG TGTCCGTCCCGCGTGTGGTAACCGAGGTGGATCGAGTGGAGGCTGCCATC AAGACCCTTAACGGCGAGCTGATCAACCTGTCGGGCCAGGTGCGCGAGAG AACCTTTTAGGCGACGTGACACACGATACCCCACCCCCTGGACCGATTTT CGAAGGTCGATTTTTCCGCGGAGGGGCCGCGCGGAGAAAGGCCGCGTTGA AGTCGTGCCATCGAGAGCTTCTCGAAAACGCTATCGTTTTATGCACGTGC ATCCTCTCCGTCGTGGAGTAATCGGGATCAGAAAGTTGGTCGAGGGGGTG TGGTATCTTGTGTCATCGACGGTAGCCCGACTGTCATATTATACGCACCT AAGGCATTGGTAGTACAGTAGTCTTGACCTTTTACCCCGCAATGTCAGCG ACGTCGTGTCCGTTCTGGATGTGACGTGCATCATACACCATACGGCCCTT GATATTATTGATTTTTCCCCGTGGGTTGTGAAAAGTTGGGCGACAGTGGT TGCAGTTTTCAATTCTTTTATATAGCTTGCTGTTGGTCCAAGACTTGCTC TGGGTGTTCGTTTTTTTGTGCTTGAATGCCGTTTCTGATTGGTAACTGCG ACACATGACAACGATCGTTGATGGTGATGCTGATGCTGCTACTACGATGA TGATAATGATGTTGCCACCGCCGTTGCTGCTGTTGCTGTTGATGATATGA TGATGATGATGATGATCCCATTTTTTTTATCAGCTGGAATCGATCGACCA CGGCGCGAACGCCCACGTGGAGACCCTGGCGAGGCTAGATCTCGTGAAAA CCAACATGGGAGACTGCTTGCACACCCTCACTGAAGCCGCTTCTTGGAAC GCTTTGGTGCGCGAGGTTAATGCCAGGTACTGCTCTAGTACTCTATTTCG TACCGCGGTACTGCCGGAGTGCTGGGCCGCCCGTCGAGCCCTGCTATGAT ATGCACCCGTCTGTTTCACTCGACGATTGGCGCAGGAAAGGGTTGTTGCA GGCTGCAGAGCAACAATCGCTCTTTTTGCGTGGCCGAAGCGTAATGATAT TGATTGGTTCGTGTCTTGCTTGTATAGTTTGATATAGATATGCAAGCAAG AGTGCTTTTGGGGGCAAGATACGGCCTGTCTGATGCACCTTCCTCGGACC ACCTAATGACATAAGTTTTGGTGCCGGAGGTGAAAATGGAACACCGCCCC CCTCCCCGCCTCTCCCCCCCACACACAAAACGACGGACTTGACAAGATTG TTCTCGCACCTCTCGGTAGGTGCACACAATACAGGGCTTTGTTCAGCTGT GACCATAATTATATGAGAGCATGTGTATGGACATGGTGCCTTTTTGCCCT TCTGTTGGGTGCTAAACCAGCTCGTCTTCGTGTTGGCAGCTTCCGGTGTA CCGCCGTTTGTGCCTTCCTGAGCACATCCTAGTTTCCCATCGATGTGCTC AGGAGACGACCTTGTTCGAGGGCTTTTTTTGACAATCTCCATCATTCCAA ACATCGTCTTCCAGTGTCAGGAGTTGTTGCTGACGACAACCACATCAGCA ATGACTACGAGTGTCGTAACCAAGCAGGATATTGACATGAAGTGTAGAAC ACCAACACGCGTACGACAATAACAATAACGATAACGTTGGCAGTTTCGGC CAAGACGACTTGAAGGGCGTGGCGCAGCGGCTAGAGGCCATGGCTGGTAG CATGGACGTCTTGAAGGACATGCCGGAAGCAGAGGACCGCGCCGCTACTC TCAGAGACCTGCAGGAGCGGCTGGAGACGCTGCTGAAGCCGAAGCTGCTC GAGGTGAACAACCCGGAAACAAGATTAGGCTAGCTGTGTTGATCTGCAGT ACAGTAGCGGTGTCAGTTATTAGCGAAGAGGGGGAGAGAGAGTTGCCAAC AAAGTAGTAGTCGATACAACGCGTCTGGAGGGGTGTGGTAGGAGAAGGTG GTTGATATAGCATTTTGATAGCAGGGGCGTGGTCAACTCGAATCTTAGCT TTACTTTCCGCAAACTATGTACCCCGTCCCTTCACAACAAAAACTCTTTT TTGACAAGATGGGGACCATTCGGATACAGATGTGGGTATCATAGCTGTCC CTCTATTTAACAAGACAGTAGTCCCTTAGATGCAATATATCGCTGGGGTC TTCCCCTGTTTGCCCCTCAAGACGCTCGCCCCTCCGAAGAAGAAACCATC ATTTTGCACACAGCTGTTGTATATCTCTCACCCGTTGCCTCCTGAAACCC CCCCCGTCTCCAGTACCCTCTACAAGAGCTCCCGGCGACGTCCATGATGT CCTTTTCTTCCCTTGGCTTCGTCTCTACCCCCCCCAACGTAACGAGTACG TGCCGCCTCTTTGATGTTTTTCCATCTTTCCCCCTCCCTCGCACGCAGAT CGTGAAGAAAGACCGCATGGGTCCTTTGATGGAGTACGCCGCCATGTACC GCCAGCTGGGCCGTACGGACGTCTTCAGGGCTGAGTACTGCAGCACCAAG GCCGCCGCCGCGCACAAGCGCTGGTTCGCGTCGGCGACAAGTTCCGGTTC GGAGGGGGGCACCACAGGGAGCGGGCTGGCTAACTGGCTGCCATCGTTCC TCGAGTACTTGCAGGTGATAACATCGTAGCTGTGGCGGTTGTGATGGTGA TGGTGATTACGTGTCTCCATTGGTGGTTTATGTTGCGTCCCCAAAACTGA AAATTTAAAAATACCCAAATCAAAACACAAACACAACACAAACACAATAT TTTATTGCACATCGTAATATGTTGATGGCAGGAGAATTGGACTTTCGAAG GACAACCACGCATGCTGGTGGTACCTGTACTTGCGTTGTTGTGGTGGCGT GATGCTGTTTGGTGTTGTGTGTCGCTATTGGGGCTCTTGGTAATGGTGGA GATGGTGTTTTTTTATGAGGGTGGGTATCTATGTTTATGTGTTCGTGATT GTGAGTGTTTTGTGGTTCAATGTCGAAGTGGTCTTGACCGGCTACGCTAG CTATGTCGAAAGTTTCGTCTGTTCTCTGTCGTAGATGGGGTTCCCCTGTC CCTCTCCACCCCACTCTGCCGAACCGCACACCTTAAGACCCAGTACAGCC GTGAAAATCAGACGTCTCCACCCACCTTCTCAATATTCACACACCGCATC GCTCATGTGCGACCAATCCTTCCCTCTCTCTGACCCCCAGACACACGTAC CTTCCTCGAGTGCGCTCTTGGTTTGTGTTGGGCCTTTTCGGGGATTGGGT ACGGGGCGGGAATACGTGGTTTGATTTGCTGTCATCAGAGTTGGACGTGC GAGGACGCGGGCGGGTACCATTCGCTTAGCTTCGTGTCTTTTCTCCGCTA CCCCTCGCTTGCTCAGGGATCGTTGATGGACGAGCGCAAGAAGACTTCGG ACTTGTTCGGTGGCGATACCTCTCCCGCGGTGCTCTGCCAGCTCGTCGTG GTGGCCTTCCAGCCCCTCTTGGGATCCTTCCAAGTGAGTCATGCGTCGGT GGGCGTCAAGAGCACGCACAGACGCGACGCTCATTGAATGCATGTTTCAG GTACTACCCCCGTCAGAGAGCGTGATCCTCGACTGAGTGTGTCTACGTCC ACCCATCCTTGCTGTCACCGCTCCTGCTCTCCAGCTGATCACATGCACAC ACGCCCTGTATGCCCCCCTCCTTCTCTCTAGAAACGTATTTAGAGGCAGC TCCTTGGGCGCCGGTCCAACGGGGAATCGTCCTTGCTGCTCTCTAGTTTA TCTTTCAACACATGTACCTCGTCGCTCCTCTCCATTGGATTTCCTACTAC CCACTGCGCCCTTGAACGCGTGTACCTGACCTCTCCATGACCGTTTCCCA TCCTCCAGAAACACCTCGAGGCAGCTCCTTGGACCGAAGCGGTAGCGCTC TTGACGGAGGTGCTGCGGTTCGTCAACCAGGCTATGGACCTGTTAAGGGG TGCGAGCGAGAGAGATTTGATAGCGGTGTTGCTGTCGAGCACGTCGGGGT TCCGGCTCATTCAGGACAGGTGTGTGAAAGTGCACGCCGTTTGTGCCTAG ACTGTTTCTTCAGTGTGCTGCTTCTGCTGTCATCGTCGCTCGTGTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTTTT GTTGTATTTTGTGGTGCAAACTGCTGATGTCGTTATGGCGGTTTTCAAGT GTGGTTCGATTCGGTTCGCTTGTCTCATGCGATGGCGAGAGTCGCCAGTG CTATCGTTATCGTTGTCCTTGGCTCTTCATGTGATGTTAGTTGATGCTGC CTCCTGGCGTTTCGCTGCCGTCCATCGGAGCATTATTATTTAGTTTTGTA ACAGGCTAGTTAGCTTGCGCTAGGTGTAGGGTAGGGTTTTTGCTGATTTG GTCGCCGTGGTTTGCTCCCTTGTTCGAAAATTCGCCGATCTCCAACGCGA CGTGTTCTTCTGCTTTCACTGTGTCGTGTGGTAGGTGATCATCTGGTGAT GAAATGCTTTTTCTGCTGTGTCTCACGTACGCATCTCGTTGTACGCACGT CTTTCTTAGCTTTGGGGCGCACGAGCGGAGCTTCTTGTCCCTCGAGCTGC AGCCTCTACTGGAAACCCTCGGCGGCGTTACAAGTGCCGTGGAGAGGGGA GGGTCGGCACCGGCGATGACCTTCACCCGGAGGATGGAAGAGGTAGACTA CAGCATAGACTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11298:422..5234+

>mRNA_Ecto-sp13_S_contig11298.1151.1 ID=mRNA_Ecto-sp13_S_contig11298.1151.1|Name=mRNA_Ecto-sp13_S_contig11298.1151.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1140bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11298:422..5234+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGCAGCCTAGACGCGCACCTGTCCACCGTAGCGACCAAGCTGCAGGCGGT
GTCCGCGACCATCAACGCGGGGCTCGAGAAGAGCATGGTGGAGATCATGG
TGTCCGTCCCGCGTGTGGTAACCGAGGTGGATCGAGTGGAGGCTGCCATC
AAGACCCTTAACGGCGAGCTGATCAACCTGTCGGGCCAGCTGGAATCGAT
CGACCACGGCGCGAACGCCCACGTGGAGACCCTGGCGAGGCTAGATCTCG
TGAAAACCAACATGGGAGACTGCTTGCACACCCTCACTGAAGCCGCTTCT
TGGAACGCTTTGGTGCGCGAGGTTAATGCCAGTTTCGGCCAAGACGACTT
GAAGGGCGTGGCGCAGCGGCTAGAGGCCATGGCTGGTAGCATGGACGTCT
TGAAGGACATGCCGGAAGCAGAGGACCGCGCCGCTACTCTCAGAGACCTG
CAGGAGCGGCTGGAGACGCTGCTGAAGCCGAAGCTGCTCGAGATCGTGAA
GAAAGACCGCATGGGTCCTTTGATGGAGTACGCCGCCATGTACCGCCAGC
TGGGCCGTACGGACGTCTTCAGGGCTGAGTACTGCAGCACCAAGGCCGCC
GCCGCGCACAAGCGCTGGTTCGCGTCGGCGACAAGTTCCGGTTCGGAGGG
GGGCACCACAGGGAGCGGGCTGGCTAACTGGCTGCCATCGTTCCTCGAGT
ACTTGCAGGGATCGTTGATGGACGAGCGCAAGAAGACTTCGGACTTGTTC
GGTGGCGATACCTCTCCCGCGGTGCTCTGCCAGCTCGTCGTGGTGGCCTT
CCAGCCCCTCTTGGGATCCTTCCAAAAACACCTCGAGGCAGCTCCTTGGA
CCGAAGCGGTAGCGCTCTTGACGGAGGTGCTGCGGTTCGTCAACCAGGCT
ATGGACCTGTTAAGGGGTGCGAGCGAGAGAGATTTGATAGCGGTGTTGCT
GTCGAGCACGTCGGGGTTCCGGCTCATTCAGGACAGCTTTGGGGCGCACG
AGCGGAGCTTCTTGTCCCTCGAGCTGCAGCCTCTACTGGAAACCCTCGGC
GGCGTTACAAGTGCCGTGGAGAGGGGAGGGTCGGCACCGGCGATGACCTT
CACCCGGAGGATGGAAGAGGTAGACTACAGCATAGACTAG
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