mRNA_Ecto-sp13_S_contig1127.1129.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1127.1129.1
Unique NamemRNA_Ecto-sp13_S_contig1127.1129.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: D7FKC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC5_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 8.820e-128
Identity = 178/182 (97.80%), Postives = 180/182 (98.90%), Query Frame = 1 
Query:    1 PGNQITYEAKVTVPAWATCLMSALESAQPQAAGPGKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQV 546
            P  +ITYEAKVTVPAWATCLMSALESAQPQAAGPGKRTFSWKQSVP+PSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQV
Sbjct:  132 PSVKITYEAKVTVPAWATCLMSALESAQPQAAGPGKRTFSWKQSVPMPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQV 313
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: A0A6H5KAL1_9PHAE (Leuk-A4-hydro_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL1_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 4.850e-124
Identity = 177/182 (97.25%), Postives = 179/182 (98.35%), Query Frame = 1 
Query:    1 PGNQITYEAKVTVPAWATCLMSALESAQPQAAGPGKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQV 546
            P  +ITYEAKVTVPAWATCLMSALESAQPQAAGP KRTFSWKQSVP+PSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQV
Sbjct:  132 PSVKITYEAKVTVPAWATCLMSALESAQPQAAGPEKRTFSWKQSVPMPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQV 313
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: A0A7S0W8K5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W8K5_9CRYP)

HSP 1 Score: 278 bits (710), Expect = 2.470e-90
Identity = 129/185 (69.73%), Postives = 151/185 (81.62%), Query Frame = 1 
Query:    1 PGNQITYEAKVTVPAWATCLMSAL-ESAQPQAA-GPGKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQVR 549
            PG + T+ A+VT P WAT LMSAL E A  +AA  PG + + W+Q VP  SYL+A+AVGEL S +IS RC +W EP V+DK A++F++TEEFL  AE L  PY+WGRYDVLCLPPSFPYGGMENPCLTFVTPTLL+GD+SLA VIAHEISHSWTGNLVTN TWEHFWLNEGWT+WLER IM ++R
Sbjct:  162 PGAKFTWTARVTSPEWATVLMSALQEDASGEAAPAPGTKVYKWRQPVPTSSYLVAIAVGELRSADISERCRVWCEPSVLDKVAYEFAETEEFLKTAESLTCPYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVIAHEISHSWTGNLVTNETWEHFWLNEGWTVWLERRIMMRIR 346
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: A0A6U4S5G1_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4S5G1_HEMAN)

HSP 1 Score: 283 bits (723), Expect = 5.950e-89
Identity = 127/185 (68.65%), Postives = 154/185 (83.24%), Query Frame = 1 
Query:    1 PGNQITYEAKVTVPAWATCLMSALE--SAQPQAAGPGKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQVR 549
            PG + T+ A+VT P WAT LMSAL+  ++  ++  PG R F WKQ VP  SYL+A+AVG+L+S +ISPRC +WSEP V+DK A++F++TE+FL  AE L  PY+WGRYDVLCLPPSFPYGGMENPCLTFVTPTLL+GD+SLA VIAHEISHSWTGNL+TN TWEHFWLNEGWT+WLER IM ++R
Sbjct:  153 PGAKFTWTARVTSPEWATVLMSALQEDASGEESTAPGTRVFRWKQPVPTSSYLVAIAVGDLKSADISPRCRVWSEPSVLDKVAYEFAETEDFLRTAESLTCPYQWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVIAHEISHSWTGNLITNETWEHFWLNEGWTVWLERRIMMRIR 337
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: A0A835YHW6_9STRA (Leukotriene A4 hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW6_9STRA)

HSP 1 Score: 280 bits (716), Expect = 1.000e-88
Identity = 137/197 (69.54%), Postives = 155/197 (78.68%), Query Frame = 1 
Query:    1 PGNQITYEAKVTVPAWATCLMSALESAQPQAAGP--GKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYE-------------WGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQV 546
            P  ++TY+A V VP WATCLMSAL +  P  AG   G RTF + Q VP+PSYLIA+AVG+L SREIS RC IWSEP +VD AA DF+QTEEFLTAAE L  PY              WGRYDVLCLPPSFPYGGMENPCLTFVTPTLL+GD+SLAFV+AHEISHSWTGNL+TNRTW+ FWLNEG+TMWLER IM++V
Sbjct:  154 PAAKLTYDATVEVPEWATCLMSALSTGAPATAGSSEGMRTFGFHQPVPVPSYLIALAVGDLASREISHRCRIWSEPSMVDAAAHDFAQTEEFLTAAEELTCPYXXXXXXXXXXXXXVWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLTGDRSLAFVVAHEISHSWTGNLITNRTWQSFWLNEGFTMWLERKIMSRV 350
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: A0A7S0HUU7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUU7_9CRYP)

HSP 1 Score: 271 bits (693), Expect = 1.650e-84
Identity = 126/183 (68.85%), Postives = 151/183 (82.51%), Query Frame = 1 
Query:    1 PGNQITYEAKVTVPAWATCLMSALESAQPQAAGPGKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQVR 549
            P  + T+ A ++ P+WAT LMSA+   Q +     KR F+W+QS+P  SYLIA+AVGELESREIS RC +WSEP +VDK A +F++TE+FLTAAE L   Y+WGRYD+LCLPPSFPYGGMENPCLTFVTPTLL+GD+SLA V+AHEI+HSWTGNLVTN TWEHFWLNEGWT+WLER IM +VR
Sbjct:  157 PSAKCTWSAVMSAPSWATVLMSAILENQSEQGQ--KRVFTWRQSLPTCSYLIAIAVGELESREISSRCRVWSEPSMVDKVANEFAETEKFLTAAESLTCEYQWGRYDLLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVVAHEIAHSWTGNLVTNATWEHFWLNEGWTVWLERRIMMRVR 337
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: A0A7S2R0R8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0R8_9STRA)

HSP 1 Score: 259 bits (662), Expect = 4.790e-84
Identity = 119/183 (65.03%), Postives = 145/183 (79.23%), Query Frame = 1 
Query:    1 PGNQITYEAKVTVPAWATCLMSALESAQPQAAGPGKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAG-PYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQV 546
            P  + TY AK+TVP WAT +MSAL   Q   A    +TF W Q VPIP+YL+A+AVG+L+SR+ISPR  IWSEP +V+ AA++F+ TE F+  AE + G  Y+W RYD+LCLPPSFPYGGMENPCLTFVTPTLL+GD+SLA V+AHEI+HSWTGNLVTN TW HFWLNEGWT+WL+R IM  +
Sbjct:  123 PAVKFTYAAKITVPVWATAVMSALLIKQQHTAQQTTKTFEWDQPVPIPAYLLALAVGQLDSRDISPRSRIWSEPSMVEAAAWEFADTENFIRMAEDITGMAYQWKRYDLLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVVAHEIAHSWTGNLVTNHTWGHFWLNEGWTIWLQRKIMAPL 305
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: A0A7S4URF4_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4URF4_GUITH)

HSP 1 Score: 270 bits (690), Expect = 6.170e-84
Identity = 127/184 (69.02%), Postives = 152/184 (82.61%), Query Frame = 1 
Query:    1 PGNQITYEAKVTVPAWATCLMSA-LESAQPQAAGPGKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGPYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQVR 549
            P  + T+ A ++ P+WAT LMSA LE+   QA    KR F+W+QSVP  SYLIA+AVG+LESREIS RC +WSEP +VDK A +F++TE+FLT AE +   Y+WGRYD+LCLPPSFPYGGMENPCLTFVTPTLL+GD+SLA V+AHEI+HSWTGNLVTN TWEHFWLNEGWT+WLER IM +VR
Sbjct:  171 PSAKCTWSAVMSAPSWATVLMSAILENKSEQAQ---KRVFTWRQSVPTCSYLIAIAVGDLESREISSRCRVWSEPSMVDKVANEFAETEKFLTTAESITCEYQWGRYDLLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVVAHEIAHSWTGNLVTNATWEHFWLNEGWTVWLERRIMMRVR 351
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: A0A448ZCN9_9STRA (Leuk-A4-hydro_C domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCN9_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.140e-83
Identity = 120/183 (65.57%), Postives = 150/183 (81.97%), Query Frame = 1 
Query:    4 GNQITYEAKVTVPAWATCLMSALESAQPQAAGPGKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAG-PYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQVR 549
            G ++TY AK +VP+WATC+MSAL   + +    G +T++W Q VPI SYL+A+AVG+L  R IS RC +WSEPG+V+ AA++FS+TE FL+ AE + G  Y WGRYD+LCLPPSFPYGGMENPCLTFVTPTLL+GDKSLA V+AHEI+HSWTGNLVTN TW+HFWLNEGWT WL+R IM +++
Sbjct:  151 GVKMTYTAKASVPSWATCVMSALLKKEEEDKASGGKTYTWDQPVPICSYLLALAVGDLTKRTISERCAVWSEPGIVESAAYEFSETEMFLSTAEAITGMDYAWGRYDLLCLPPSFPYGGMENPCLTFVTPTLLAGDKSLADVVAHEIAHSWTGNLVTNATWDHFWLNEGWTTWLQRKIMARMK 333
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BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Match: A0A1E7EV22_9STRA (Leukotriene A-4 hydrolase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EV22_9STRA)

HSP 1 Score: 265 bits (676), Expect = 1.470e-83
Identity = 123/184 (66.85%), Postives = 147/184 (79.89%), Query Frame = 1 
Query:    1 PGNQITYEAKVTVPAWATCLMSALESAQPQAAGPGKRTFSWKQSVPIPSYLIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAG-PYEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHSWTGNLVTNRTWEHFWLNEGWTMWLERNIMTQVR 549
            PG +++Y A VTVP WATC+MSA+           K  +SW Q VPI SYL+A+AVG+L  R+IS RC IWSEP VV+ AAF+FS+TEEFL AAE + G  Y WGRYD+LCLPPSFPYGGMENPCLTFVTPTLL+GD+SLA V+AHEI+HSWTGNLVTN TW+HFWLNEGWT WL+R IM +++
Sbjct:   61 PGVKMSYTATVTVPQWATCVMSAVLKNTDILIEEKKVRYSWDQPVPISSYLLAMAVGQLSKRDISKRCAIWSEPSVVEAAAFEFSETEEFLCAAEAITGMDYVWGRYDLLCLPPSFPYGGMENPCLTFVTPTLLAGDRSLADVVAHEIAHSWTGNLVTNATWDHFWLNEGWTTWLQRKIMARMK 244
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1127.1129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKC5_ECTSI8.820e-12897.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAL1_9PHAE4.850e-12497.25Leuk-A4-hydro_C domain-containing protein n=1 Tax=... [more]
A0A7S0W8K5_9CRYP2.470e-9069.73Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6U4S5G1_HEMAN5.950e-8968.65Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A835YHW6_9STRA1.000e-8869.54Leukotriene A4 hydrolase n=1 Tax=Tribonema minus T... [more]
A0A7S0HUU7_9CRYP1.650e-8468.85Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S2R0R8_9STRA4.790e-8465.03Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S4URF4_GUITH6.170e-8469.02Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A448ZCN9_9STRA1.140e-8365.57Leuk-A4-hydro_C domain-containing protein n=1 Tax=... [more]
A0A1E7EV22_9STRA1.470e-8366.85Leukotriene A-4 hydrolase (Fragment) n=1 Tax=Fragi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1127contigEcto-sp13_S_contig1127:23..1835 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score379.8
Seed ortholog evalue7.2e-103
Seed eggNOG ortholog2880.D7FKC5
Preferred nameLTA4H
Model size549
KEGG rclassRC00096,RC00141,RC00838
KEGG koko:K01254,ko:K15428
KEGG ReactionR00899,R03057,R04951
KEGG Pathwayko00480,ko00590,ko01100,map00480,map00590,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000328,GO:0001676,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004177,GO:0004301,GO:0004463,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005770,GO:0005771,GO:0005773,GO:0005775,GO:0005829,GO:0006082,GO:0006508,GO:0006518,GO:0006629,GO:0006631,GO:0006633,GO:0006690,GO:0006691,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009719,GO:0009725,GO:0009888,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010243,GO:0010883,GO:0012505,GO:0016053,GO:0016192,GO:0016787,GO:0016801,GO:0016803,GO:0019370,GO:0019538,GO:0019752,GO:0030141,GO:0030154,GO:0030163,GO:0030323,GO:0030324,GO:0030855,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032368,GO:0032369,GO:0032501,GO:0032502,GO:0032787,GO:0032879,GO:0032890,GO:0032891,GO:0032940,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0034641,GO:0035295,GO:0036230,GO:0042119,GO:0042221,GO:0042277,GO:0042759,GO:0043167,GO:0043169,GO:0043170,GO:0043171,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043269,GO:0043271,GO:0043299,GO:0043312,GO:0043434,GO:0043436,GO:0043603,GO:0044070,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046394,GO:0046456,GO:0046872,GO:0046903,GO:0046914,GO:0048513,GO:0048519,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050896,GO:0051049,GO:0051051,GO:0051179,GO:0051234,GO:0051641,GO:0060428,GO:0060429,GO:0060479,GO:0060487,GO:0060509,GO:0060541,GO:0061957,GO:0065007,GO:0065008,GO:0070006,GO:0070011,GO:0070013,GO:0070727,GO:0070820,GO:0071704,GO:0072330,GO:0072665,GO:0090087,GO:0097708,GO:0099503,GO:0101002,GO:0120113,GO:0140096,GO:1901564,GO:1901565,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1903792,GO:1904724,GO:1904813,GO:1905952,GO:1905953,GO:2000191,GO:2000192
Exons4
EggNOG free text desc.epoxide hydrolase activity
EggNOG OGsCOG0308@1,KOG1047@2759
EC3.3.2.6
Cds size549
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462589.1193547-CDS-Ecto-sp13_S_contig1127:22..2221681462589.1193547-CDS-Ecto-sp13_S_contig1127:22..222Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1127 23..222 +
1681462589.1298487-CDS-Ecto-sp13_S_contig1127:640..8391681462589.1298487-CDS-Ecto-sp13_S_contig1127:640..839Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1127 641..839 +
1681462589.137971-CDS-Ecto-sp13_S_contig1127:1197..12741681462589.137971-CDS-Ecto-sp13_S_contig1127:1197..1274Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1127 1198..1274 +
1681462589.1462016-CDS-Ecto-sp13_S_contig1127:1762..18351681462589.1462016-CDS-Ecto-sp13_S_contig1127:1762..1835Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1127 1763..1835 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1127.1129.1prot_Ecto-sp13_S_contig1127.1129.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1127 23..1835 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1127.1129.1

>prot_Ecto-sp13_S_contig1127.1129.1 ID=prot_Ecto-sp13_S_contig1127.1129.1|Name=mRNA_Ecto-sp13_S_contig1127.1129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
PGNQITYEAKVTVPAWATCLMSALESAQPQAAGPGKRTFSWKQSVPIPSY
LIAVAVGELESREISPRCCIWSEPGVVDKAAFDFSQTEEFLTAAEGLAGP
YEWGRYDVLCLPPSFPYGGMENPCLTFVTPTLLSGDKSLAFVIAHEISHS
WTGNLVTNRTWEHFWLNEGWTMWLERNIMTQVR
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mRNA from alignment at Ecto-sp13_S_contig1127:23..1835+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1127.1129.1 ID=mRNA_Ecto-sp13_S_contig1127.1129.1|Name=mRNA_Ecto-sp13_S_contig1127.1129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1127:23..1835+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCCGGAAATCAGATCACGTACGAGGCGAAGGTGACAGTCCCGGCGTGGGC
GACGTGCCTCATGAGCGCGCTCGAGTCTGCCCAGCCTCAGGCAGCGGGTC
CCGGAAAGAGGACTTTCTCGTGGAAGCAGAGCGTGCCTATACCCTCGTAC
CTCATCGCCGTCGCCGTGGGAGAGCTCGAGAGCCGCGAGATCAGCCCGAG
GTGGGGCTTGCGCGTGTGTACTTTTGATTCCCGATGCCTTGAATTGGCGT
CATCCCTTGATGATGCATGTCGGCTATGCCTACGCATATATACAGGTTGC
TGAATTTTCCAACACGGTTTTTTTTTATTGTAGATGTCACAACCGTGCTG
ACGAGAGTAATGGCGTCATCTTTTTGCGAGGTATTACAGTAGGTGCCAGA
CGCATGTTGAACACATGTTCGATTTGGCTCGTGTCTTTAGCTGTTCCAGA
CCAGAAGCAGAATCCCTGGCCCCCTTGGCTGTCCTTCCACGCGAAAGAAA
CGTTTTGCATTCCCATAACGCGCATAATCCAGCGTTTTGATATGGCTGAA
TCACTGTCACCGCCGTCTCCCCTGGCGGCGCCGTCCCACCTTGGTTGCCG
CTCCCAACACTTCGCCAGGTGCTGCATCTGGTCCGAGCCGGGAGTGGTGG
ACAAGGCGGCGTTCGACTTCTCGCAGACGGAAGAGTTTCTTACCGCGGCG
GAAGGCTTGGCCGGCCCGTACGAGTGGGGGCGCTACGACGTGCTCTGCCT
GCCTCCGTCCTTCCCGTACGGTGGCATGGAGAACCCTTGCCTGACGTTCG
TCACCCCTACGCTGCTGGTGAGCTAGTTATCTCCGCATCTTTTTGGTTTT
GTGGTGACGGTGGCGAGGCGGTGGTCGCGCTTTGTGTCGGTGCTGAGCGT
CTGTGGACGGTCACACCACGATCGTAGAAGGTAGTGCTCGGGTGATTACA
CGGTGTTTTATCCTCGGTGCATGCCGCAGTAGTGTTGGTGCACGATTGCT
GTTCTGGGTGTTGTACTTTCCTGCTTCTGCTGCCGCTGGCGCCTTTGCCG
TTTGACACCTCGGCTGTGTGTCCTCTCTCACGTTCTCTGTCACTCTCTCT
CTACCTATCTCCTTCCCTCCCTCCCTCGTCTGACTCGCCTTTCTCTCGGT
CCCTCCTCCGATTCGTTCCCGGCAGTCCGGCGACAAGTCTCTGGCCTTCG
TGATCGCCCACGAGATCAGTCACAGCTGGACGGGGAATCTCGTCACCAAC
AGGTACACGATCACGCCGCAACAATAGTGGTGTTGCTTTCGTTGTCATCG
TTGTCGAGTAGGATGTTGTTCTGCCGGCTGCCCCATATTGCCATCAGCCT
TCTACGTGCTTTCCTTCGTGGTCGGAAAAGGACGCCACCGCCGTGAAATC
AAAAGCAACAGATACCATGGATGAAGATGGATTTGTTGTGTGCAATGAAG
GGAAAGAAATACATCGTGAACAGGGCTATTTGCGCTCGTTTGCGGTCGCC
CAGCTCGGCGAGAAAAACACTGGCTCAGTTGTCCGAAATCCTGTTCATAC
GTTTGTCGGCCTTCCCAACGTCCTCAAGCACGCGGTTGAATTGGGGTGGG
CACACGCTCTCGTGCCCCTGTTCGCGTTGCGCATTGCCGCCCGGCGAAAG
TCTCGTGGTACGTTGACAAACCGCACTTCTTTTGCCATAGATGACGTATT
TTTTTGTCTTGACGTCATTTCCGCCTTCAACCCAACCCAGGACTTGGGAG
CACTTCTGGCTGAATGAGGGGTGGACGATGTGGCTGGAACGCAACATCAT
GACTCAGGTAAGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1127:23..1835+

>mRNA_Ecto-sp13_S_contig1127.1129.1 ID=mRNA_Ecto-sp13_S_contig1127.1129.1|Name=mRNA_Ecto-sp13_S_contig1127.1129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=549bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1127:23..1835+ (Ectocarpus species13 EcNAP12_S_4_19m)
CCCGGAAATCAGATCACGTACGAGGCGAAGGTGACAGTCCCGGCGTGGGC
GACGTGCCTCATGAGCGCGCTCGAGTCTGCCCAGCCTCAGGCAGCGGGTC
CCGGAAAGAGGACTTTCTCGTGGAAGCAGAGCGTGCCTATACCCTCGTAC
CTCATCGCCGTCGCCGTGGGAGAGCTCGAGAGCCGCGAGATCAGCCCGAG
GTGCTGCATCTGGTCCGAGCCGGGAGTGGTGGACAAGGCGGCGTTCGACT
TCTCGCAGACGGAAGAGTTTCTTACCGCGGCGGAAGGCTTGGCCGGCCCG
TACGAGTGGGGGCGCTACGACGTGCTCTGCCTGCCTCCGTCCTTCCCGTA
CGGTGGCATGGAGAACCCTTGCCTGACGTTCGTCACCCCTACGCTGCTGT
CCGGCGACAAGTCTCTGGCCTTCGTGATCGCCCACGAGATCAGTCACAGC
TGGACGGGGAATCTCGTCACCAACAGGACTTGGGAGCACTTCTGGCTGAA
TGAGGGGTGGACGATGTGGCTGGAACGCAACATCATGACTCAGGTAAGA
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