mRNA_Ecto-sp13_S_contig11262.1124.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11262.1124.1
Unique NamemRNA_Ecto-sp13_S_contig11262.1124.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: D8LEH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH4_ECTSI)

HSP 1 Score: 1374 bits (3556), Expect = 0.000e+0
Identity = 877/1091 (80.38%), Postives = 901/1091 (82.58%), Query Frame = 1 
Query:    1 KIKDKEEEEQMGKKYADMDDYVKRLDRDRVRLVTKLKVVFDRFDKSGEGTISAANARDALLYMGRDVTGEACASWLADRERHRGDSGGQGGDISFVDFSTAYSALFTDEDPYIDLRERWGPGGGPKEQGVSVTGSGHVRLRQKKSAQGRGDGAHGSWAPGSSEDEGGFRTGSSRHSPHRKTPRGGGGEDASNDGDDHYRDNAQAEAFEALRSVKKLAEVKRVFDRFAVDGMLTAYEALQALTEAGCTAPRTHAGRYLRSRRFFGLRREVTFFEFLRSMAALGVHDSGAHVAGFAPSMIPLGGSGSSIPFRARHSSRGPRDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAPRRGVSPKRVVGAGGVTRRRGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGREGGRRLPSEESDTGGDGDRSDXXXXXXXXXXXRGSVPREERGGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAKGPSSARSRRKASSPSGDESSKGRSGQETRGGPASSFTRGDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEPKTNAGGGGGRGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDI--------------------------------------------------------------------AYDDGEKEIGIAAEHVRSLQQSTSEGGRGGSGRARALTLMEGDEVEANFRSRGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSAGNGRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDVRGSGMVRGDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRPTSAGGRG-RAGRMARGDRVEASYRGKGTKFYKG 3066
            KIKDKEE+EQMGK YADMDDYVKRLDRDRVRLVTKLKVVFDRFDKSG GTIS ANARDALLYMGRDVTGEACASWLADRER+RGD GGQ GDISFVDFSTAYSALF DEDP IDL ER GP GGPKEQGVSVTGSGHVRLRQK SAQGRGDGAHGSWAPGSSEDE GFRTGS RHSPHRKTPRGGGGEDASNDGDDHYR+NAQAEAFEALRSVKKLAEVKRVFDRFAVDGMLTAYEALQALTEAGCTAPRTHAGRYLRSRRFFGLRREVTFFEFLRSMAALGVHDSGAHVAGFAP+MIPLGG G++ PFRARH SRG R DXXXXXXXX                XXXXXX         XXXXXXXXXXXXXXXXXXXXXX  SPAPRRGVSP+R VGAGG++R              XXXXXXXXXXXXX           RYGREGG+RLPS+ESDTGGDGDRSD           RGSVP+EER GRE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DGA+ PSSARS RKASSPSGD S++GRSGQE RGGPASSFTRGDRVEARYR RGT FYKGTISRVNS+DTVDVAYDDGEKEI IATEHVRSLEPGASGGG RTRGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIA EHVRSLEP+ NAGGGGGRGL MARGD+VEVRYRGKGTKFYKGKISRVNSD TMDI                                                                    AYDDGEKEIGIAAEHVRSL+QSTSEGGRGGSGR RA TL+EGD+VEANFR RGRFYPGRI RVNLDGTF+IDYDDGEKERGVTDDLIRASDRGSSHRDEGRS G+ RLERGDRVEARYRGRGTKFYKGKISRVNS GTFDISY DGEKEIGIAAEHVRSLE KNSTGDNDVRGSGM RGDRVE RYRGKGTKFYKGKISRVNSD T DIAYDDGEKEIGIA EHVRSLDRPTSAGG G R GR+ RGDRVE  YRGKGTKFYKG
Sbjct:  414 KIKDKEEQEQMGKNYADMDDYVKRLDRDRVRLVTKLKVVFDRFDKSGGGTISTANARDALLYMGRDVTGEACASWLADRERNRGDGGGQSGDISFVDFSTAYSALFADEDPDIDLGERRGPRGGPKEQGVSVTGSGHVRLRQK-SAQGRGDGAHGSWAPGSSEDEQGFRTGSRRHSPHRKTPRGGGGEDASNDGDDHYRENAQAEAFEALRSVKKLAEVKRVFDRFAVDGMLTAYEALQALTEAGCTAPRTHAGRYLRSRRFFGLRREVTFFEFLRSMAALGVHDSGAHVAGFAPAMIPLGGGGTNTPFRARHGSRG-RRDXXXXXXXXYMSVTGKRGGGRSGSRXXXXXXGRSGEGRAYXXXXXXXXXXXXXXXXXXXXXXRRSPAPRRGVSPRRSVGAGGISR-------------GXXXXXXXXXXXXXTRRSRSASRKSRYGREGGKRLPSDESDTGGDGDRSDGSAFGTRGRGRRGSVPQEERDGRERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----DGARAPSSARSHRKASSPSGDASNEGRSGQEARGGPASSFTRGDRVEARYRGRGTKFYKGTISRVNSNDTVDVAYDDGEKEISIATEHVRSLEPGASGGGSRTRGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAEEHVRSLEPQANAGGGGGRGLTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAEEHVRSLEPQANAGGGGGRGLTMARGDRVEVRYRGKGTKFYKGKVSRVNSDDTMDIAYDDGEKEIGIAAEHVRSLEQSTSEGGRGGSGRGRAPTLVEGDKVEANFRGRGRFYPGRIGRVNLDGTFNIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSGGSVRLERGDRVEARYRGRGTKFYKGKISRVNSDGTFDISYGDGEKEIGIAAEHVRSLESKNSTGDNDVRGSGMARGDRVEARYRGKGTKFYKGKISRVNSDATFDIAYDDGEKEIGIAVEHVRSLDRPTSAGGGGERRGRLERGDRVEVRYRGKGTKFYKG 1485
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BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: A0A6H5JBA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA5_9PHAE)

HSP 1 Score: 1362 bits (3525), Expect = 0.000e+0
Identity = 875/1100 (79.55%), Postives = 906/1100 (82.36%), Query Frame = 1 
Query:    1 KIKDKEEEEQMGKKYADMDDYVKRLDRDRVRLVTKLKVVFDRFDKSGEGTISAANARDALLYMGRDVTGEACASWLADRERHRGDSGGQGGDISFVDFSTAYSALFTDEDPYIDLRERWGPGGGPKEQGVSVTGSGHVRLRQKKSAQGRGDGAHGSWAPGSSEDEGGFRTGSSRHSPHRKTPRGGGGEDASNDGDDHYRDNAQAEAFEALRSVKKLAEVKRVFDRFAVDGMLTAYEALQALTEAGCTAPRTHAGRYLRSRRFFGLRREV------------------------------------------TFFEFLRSMAALGVHDSGAHVAGFAPSMIPLGGSGSSIPFRARHSSRGPRDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAPRRGVSPKRVVGAGGVTR-----------------------------------RRGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYGREGGRRLPSEESDTGGDGDRSDXXXXXXXXXXXRGSVPREERGGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGAKGPSSARSRRKASSPSGDESSKGRSGQETRGGPASSFTRGDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEPKTNAGGGGGRGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIAYDDGEKEIGIAAEHVRSLQQSTSEGGRGGSGRARALTLMEGDEVEANFRSRGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSAGNGRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDVRGSGMVRGDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRPTSAGGRG-RAGRMARGDRVEASYRGKGTKFYKG 3066
            KIKDKEEEE MGKKYADMDDYVKRLDRDRVRLVTKLKVVFDRFDK GEGTISAANARDALLYMGRD++GEACASWLADRERHRGDSGGQGGDISFVDF TAYSALF DEDPYIDL E WGPGGGPKEQGVSVTGSGHVRLRQKKSAQGRGDGAHGSWAPGSSEDE  FRTGSSRHSPHRKTPRG G ED SN+GDDHYRD+AQAEAFEALRSVKKLAEVKRVFDRFAVDGMLT YEALQALTEAGCTAPRTHAGRYLRSRRFFGLRREV                                          TFFEFLRSMAALGVHDSGAHV GFAPSMIPLGG GSSIPF+AR SSRGPRD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SP P RGVSP+RV+GAGGV+R                                    R                                    RYGREGG+RL SEE                      RGSVP+EERGGRE      XXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXDGA+GPSSARSRRKASSPS DES++GRS QETRGGPASSF+RGDRVEARYR+RGT FYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMARGDRVEVRYRGKGT FYKG ISRVNSDGTMDI+YDDGEKEIGIAPEHVRSLEP+TNAG GGGRG  MARGD+VEVRYRGKGTKFYKGKISRVNSD TMDIAYDDGEKEIGIAAEHVRSL+QSTSEGGRGG GRARA TLMEGD+VEANFR RGRFYPGRISRVN+DGTF+IDYDDGEKERGVTDDLIRASDRG++HRDEGRS G+GRLERGDRVEA++RGRG+KFYKGKISRVNS GTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDV GSGM +GDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRP SAGG G R GR+ RGDRVEA  RGKG+KFYKG
Sbjct:  296 KIKDKEEEE-MGKKYADMDDYVKRLDRDRVRLVTKLKVVFDRFDKRGEGTISAANARDALLYMGRDISGEACASWLADRERHRGDSGGQGGDISFVDFCTAYSALFADEDPYIDLGETWGPGGGPKEQGVSVTGSGHVRLRQKKSAQGRGDGAHGSWAPGSSEDEEEFRTGSSRHSPHRKTPRGDGVEDTSNNGDDHYRDHAQAEAFEALRSVKKLAEVKRVFDRFAVDGMLTTYEALQALTEAGCTAPRTHAGRYLRSRRFFGLRREVCFRGGLTVALSGDLTGASGLGMVGALVEGKPNSQFTRLTTQVTFFEFLRSMAALGVHDSGAHVTGFAPSMIPLGGGGSSIPFKARRSSRGPRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHRR-SPVPHRGVSPRRVMGAGGVSRGXXXXXXXXXXXXXXXXXXXXXXXXXPSYSPRRSRSRLADSGASSSDIEEDKDGSPSRRGRRAMRHKRDKHRSRYGREGGKRLTSEEXXXXXXXXXXXGSAFGSRGRGRRGSVPQEERGGRERQQTRSXXXXXXXXXXXXXXXXXXXXXXXXXXAGGRPXXXXXXXXXXXXXXXXXXXXXDGARGPSSARSRRKASSPSRDESNEGRSCQETRGGPASSFSRGDRVEARYRARGTKFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMARGDRVEVRYRGKGTNFYKGNISRVNSDGTMDITYDDGEKEIGIAPEHVRSLEPQTNAGSGGGRGHTMARGDRVEVRYRGKGTKFYKGKISRVNSDCTMDIAYDDGEKEIGIAAEHVRSLEQSTSEGGRGGGGRARAPTLMEGDKVEANFRGRGRFYPGRISRVNVDGTFNIDYDDGEKERGVTDDLIRASDRGNAHRDEGRSGGSGRLERGDRVEAKHRGRGSKFYKGKISRVNSDGTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDVIGSGMAKGDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRPISAGGGGERRGRLERGDRVEARCRGKGSKFYKG 1393
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BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: A0A6H5KJS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS9_9PHAE)

HSP 1 Score: 533 bits (1374), Expect = 1.150e-161
Identity = 298/451 (66.08%), Postives = 344/451 (76.27%), Query Frame = 1 
Query: 1729 RSGQETRGGPASSFTRGDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEPKTNAGGGGGRGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIAYDDGEKEIGIAAEHVRSLQQSTSEGGRGGSGRARALTLMEGDEVEANFRSRG-RFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSAGNGRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDVRGSGMVRGDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRPTSAGGRGRAGRMA----RGDRVEASYRGKGTKFYKG 3066
            RSG E+ GG    + RGDRVEARYR RGT FYKG ISR+NSD T+D+AYDDG++EIGIA EHVRSLEP     GGR   S MA+GDRVE RYRGKGT+FYKGKISRVNSD T DI+Y+DGEKE+GIA EHVRSLEP  + GGG   G  MARGD+VE RYRGKGT+FYKGKISRVNSD T DIAY+DGEKE+GIAAEHVRSL+ + S+GG G SG      +  GD VEA +R +G RFY G+ISRVN D TFDI YDDGEKE G+  + +R+ +   S   +G      ++ RGDRVEARYRG+G +FYKGKISRVNS  TFDI+YDDGEKE+GIAAEHVRSLEP  S G   + GS M RGDRVE RYRGKG +FYKGKISRVNSD T DIAYDDGEKE+GIA EHVRSL+   S GG G   +M      GD+VEA++RG+G +FY G
Sbjct:  232 RSGDESAGG----WARGDRVEARYRGRGTKFYKGRISRINSDKTMDIAYDDGKQEIGIAAEHVRSLEPTVGDRGGRA--SKMAKGDRVEARYRGKGTRFYKGKISRVNSDQTFDIAYNDGEKEVGIAAEHVRSLEPAMSDGGGIS-GSKMARGDRVEARYRGKGTRFYKGKISRVNSDQTFDIAYNDGEKEVGIAAEHVRSLEPAMSDGG-GISG----SKMARGDRVEARYRGKGTRFYKGKISRVNSDQTFDIAYDDGEKEVGIAAEHVRSLEPAMS---DGGGISGSKMARGDRVEARYRGKGIRFYKGKISRVNSDQTFDIAYDDGEKEVGIAAEHVRSLEPAMSDGGG-ISGSKMARGDRVEARYRGKGIRFYKGKISRVNSDQTFDIAYDDGEKEVGIATEHVRSLEPAMSDGGSGTGRQMPVTLLEGDKVEANFRGRG-RFYPG 665
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BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: D8LG68_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG68_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 1.030e-115
Identity = 226/381 (59.32%), Postives = 249/381 (65.35%), Query Frame = 1 
Query: 1684 RRKASSPSGDESSKGRSGQETRGGPASSFTRGDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEPKTNAGGGGGRGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIAYDDGEKEIGIAAEHVRSLQQSTSEGGRGGSGRARALTLMEGDEVEANFRSRGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSAGNGRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDVRGSGMVRGDRVE 2826
            R ++ SP  DE +    GQ + GG A    RGDRVEARYR RGT FYKG ISR+NSD T+D+AYDDGEKEIGIA EHVRSLEP A    GRT  S MA+GDRVE RYRGKGT+FYKGKISRVNSD T DI+YDDGEKEIGIA EHVRSLEP  N+  G  RG  MARGD+VE RYRGKGT+FYKGKISRVNSD T DIAYDDGEKEIGIA+EHVRSL+ + S+GG                                                     GV         RGS            ++ RGDRVEARYRG+GT+FYKGKISRVNS  TFDI+YDDGEKEIGIAAEHVRSLEP NS     V GS M +GDRVE
Sbjct:  179 RLESKSPRADELNNEGRGQRSGGGSAGGLARGDRVEARYRGRGTKFYKGRISRINSDKTMDIAYDDGEKEIGIAAEHVRSLEPTAGDRRGRT--SKMAKGDRVEARYRGKGTRFYKGKISRVNSDQTFDIAYDDGEKEIGIASEHVRSLEPM-NSDSGDVRGSKMARGDRVEARYRGKGTRFYKGKISRVNSDQTFDIAYDDGEKEIGIASEHVRSLEPAMSDGG-----------------------------------------------------GV---------RGS------------KMARGDRVEARYRGKGTRFYKGKISRVNSDQTFDIAYDDGEKEIGIAAEHVRSLEPMNSDSGG-VSGSKMAKGDRVE 481
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BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: A0A7S4A011_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A011_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.520e-99
Identity = 207/438 (47.26%), Postives = 262/438 (59.82%), Query Frame = 1 
Query: 1750 GGPASSFTRGDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEPKTNAGGGGGRGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIAYDDGEKEIGIAAEHVRSLQQSTSEG-GRGGSGRARALTLMEGDEVEANFRSRGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSAGNGRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDVRGSGMVRGDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRPTSAGGRGRAGRMARGDRVEASYRGKGTKFY 3060
            GG +     GD+VEA YR RG  FY G I+R   DDT D++YDDGE+E  +A   +R L+ G+SGG        +  GDR+E  YRG+G KFY GKI+R   D T DI YDDGE+E  +A   +RS +       GGG    +  GD VE RYRG+  K+YKGKISR   D T DIAYDDGEKE  +    +R  ++ +S    RG   R     L EGD+VEA++R RG+FYPG+ISR   D T+DIDYDDGE+E  V   LIR+         EG S G+ +LE GD+VEARYRGR  K+Y GKI+R    GT+DISYDDGE+E  +    +R  +              +  GD+VE  YRG+G KFYKGKISR   DDT DIAYDDGE+EI +A   +R +         G +     GD++EA YRG+G KFY
Sbjct:  141 GGGSDRLEEGDKVEADYRGRG-KFYPGKITRDRGDDTYDISYDDGERETRVAKRLIRKLDGGSSGG-------RLREGDRIEADYRGRG-KFYPGKITRDRGDDTYDIDYDDGERETRVAKRLIRSKD-------GGGGDDKLREGDLVEARYRGR-EKYYKGKISRDRGDGTYDIAYDDGEKETRVEERLIRKRERGSSRSRSRGADDR-----LSEGDKVEADYRGRGKFYPGKISRDRGDDTYDIDYDDGERETRVAKRLIRSK--------EG-SGGSSKLEEGDKVEARYRGR-EKYYPGKITRDRGDGTYDISYDDGERETRVEERLIRKKDRXXXXXXXRGGDDRLSEGDKVEADYRGRG-KFYKGKISRDRGDDTYDIAYDDGEREIRVAKRLIRKIG--------GGSDSFREGDKIEADYRGRG-KFY 536
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BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: A0A835ZKM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKM7_9STRA)

HSP 1 Score: 352 bits (903), Expect = 2.580e-99
Identity = 210/469 (44.78%), Postives = 284/469 (60.55%), Query Frame = 1 
Query: 1777 GDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRG---------STMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEP--KTNAGGGGGRGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIAYDDGEKEIGIAAEHVRSLQ------QSTSEGGRGGSGRARALTLMEGDEVEANFRSRGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSAGNGR----LERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDVRGSG-------------MVRGDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRPTSAGGRGRAGRMAR-----GDRVEASYRGKGTKFYKG 3066
            GD+VEARY+ R T +Y G I R N D T DV YDDGEKE+ +A + ++SLEP    G     G         + +  GD+VE RY+G+  ++Y GK+ R N DGT D+ YDDGEKE+ +A E +RSLEP  ++ A       L +  GDKVE RY+G+  + Y GKI RVN D T D+ YDDGEKE+ +AA+ ++SL+      +S ++G +G      A  L EGD+VEA ++ R RF+PG+I RVN DGT+D+DYDDGEKE  V  DLIR+ +      D G + G G     L  GD+VEARY+GR  ++Y GKI R N  GT+D+ YDDGEKE+ +AA+ +RSLE                           +  GD+VE RY+G+  ++Y GKI R N D T DI YDDGEKE+ +AA+ +RSL+ P  AG  G   R A      GD++EA YRG+  +++KG
Sbjct:  644 GDKVEARYKGR-TRYYPGKIQRANRDGTYDVDYDDGEKELSVAADLIKSLEPPPRRGESVNEGLRVSSSAAAAALIEGDKVEARYKGR-ARYYPGKLRRANRDGTYDVDYDDGEKELSVAAELIRSLEPPRRSPARIDSSSALPLREGDKVEARYKGR-ARHYPGKIRRVNRDGTYDVDYDDGEKELSMAADLIKSLEADARRTESVNDGAQG------AAALREGDKVEARYKGRARFFPGKIRRVNRDGTYDVDYDDGEKELSVAADLIRSLEVDGRRPDSGGARGGGASAAALREGDKVEARYKGR-ARYYTGKIRRANRDGTYDVDYDDGEKELSVAADFIRSLEGXXXXXXXXXXXXXXXXXXXXXXXXXVLREGDKVEARYKGR-ARYYPGKIRRANRDGTYDIDYDDGEKELSVAADLIRSLEPPPRAG-IGSPSRAAETPLQVGDKIEARYRGR-ERYFKG 1099
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BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: A0A7S4A0H1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0H1_9STRA)

HSP 1 Score: 312 bits (799), Expect = 6.590e-93
Identity = 188/385 (48.83%), Postives = 234/385 (60.78%), Query Frame = 1 
Query: 1750 GGPASSFTRGDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEPKTNAGGGGGRGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIAYDDGEKEIGIAAEHVRSLQQSTSEGGRGGSGRARALTLMEGDEVEANFRSRGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSAGNGRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDVRGSGMVRGDRVEVRYRGKGTKFYKGKISRVNSDDTMDI 2904
            GG + SF  GD+VEA YR RG  FYKG ISR   DDT D+AYDDGE+E  +A   +R L+ G+ G        +   GD++E  YRG+G KFY GKISR   D T DI+YDDGE+E  +A   +RS       GGGGG    +  GDKVE  YRG+G KFY GKI+R   D T DI+YDDGE+E  +A   +R L   +S GGR          L EGD +EA++R RG+FYPG+I+R   D T+DIDYDDGE+E  V   LIR+ D G          G+ +L  GD VEARYRGR  K+YKGKISR    GT+DI+YDDGEKE  +    +R  E  +S   +      +  GD+VE  YRG+G KFY GKI+R   DDT DI
Sbjct:   20 GGSSDSFREGDKVEADYRGRG-KFYKGKISRDRGDDTYDIAYDDGERETRVAKRLIRKLDGGSGG-------DSFREGDKIEADYRGRG-KFYPGKISRDRGDDTYDIAYDDGERETRVAKRLIRST------GGGGGGSDRLEEGDKVEADYRGRG-KFYPGKITRDRGDDTYDISYDDGERETRVAKRLIRKLDGGSS-GGR----------LREGDRIEADYRGRGKFYPGKITRDRGDDTYDIDYDDGERETRVAKRLIRSKDGGG---------GDDKLREGDLVEARYRGR-EKYYKGKISRDRGDGTYDIAYDDGEKETRVEERLIRKRERGSSRSRSRGADDRLSEGDKVEADYRGRG-KFYPGKITRDRGDDTYDI 366
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BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: A0A8J2SZP4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZP4_9STRA)

HSP 1 Score: 332 bits (852), Expect = 1.120e-91
Identity = 210/439 (47.84%), Postives = 266/439 (60.59%), Query Frame = 1 
Query: 1750 GGPASSFTRGDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEPKTNAGGGGGRGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIAYDDGEKEIGIAAEHVRSLQQSTSEGGRGGSGRARALTLMEGDEVEANFRSRGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSAGNGRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKNSTGDNDVRGSGMVRGDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRPTSAGGRGRAGRMARGDRVEASYRGKGTKFYKG 3066
            GG + SF  GD++EA YR RG  FY G ISR   DDT D+ YDDGE+E  +A   +RS E   SGG      S +  GD+VE RYRG+  K+Y GKI+R   DGT DISYDDGE+E  +    ++  +       GGG   +   GDK+E  YRG+G KFY GKISR   D T DI YDDGE+E  ++   +RS      +GG G S +     L EGD+VEA +R R ++YPG+I+R   DGT+DI YDDGE+E  V + LIR  DR           G+ RL  GD+VEA YRGRG KFYKGKISR     T+DI+YDDGE+E+ +A   +R L+  +S    +        GD+VE  YRG+G KFYKGKISR   DDT DIAYDDGE+E+ ++   +R LD     GG G       GD++EA YRG+G KFY G
Sbjct:  368 GGGSDSFREGDKIEADYRGRG-KFYPGKISRDRGDDTYDIDYDDGERETRVAKRLIRSKE--GSGGS-----SKLEEGDKVEARYRGR-EKYYPGKITRDRGDGTYDISYDDGERETRVEERLIKKKD-------GGGGSDSFREGDKIEADYRGRG-KFYPGKISRDRGDDTYDIDYDDGERETRVSKRLIRS-----KDGGSGSSDK-----LEEGDKVEARYRGREKYYPGKITRDRGDGTYDISYDDGERETRVEERLIRKKDRXXXXXXX--RGGDDRLSEGDKVEADYRGRG-KFYKGKISRDRGDDTYDIAYDDGERELRVAKRLIRKLDGGSSDSFRE--------GDKVEADYRGRG-KFYKGKISRDRGDDTYDIAYDDGEREMRVSKRLIRKLD-----GGSG-GDSFREGDKIEADYRGRG-KFYPG 760
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BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: A0A2R5GDF6_9STRA (Cytidine deaminase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDF6_9STRA)

HSP 1 Score: 329 bits (844), Expect = 1.470e-90
Identity = 219/491 (44.60%), Postives = 287/491 (58.45%), Query Frame = 1 
Query: 1777 GDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTR---------------GSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEPKTNAGGG---GGR---------GLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIAYDDGEKEIGIAAEHVRSLQQSTSEGGRGGSGRARAL--TLMEGDEVEANFRSRGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGRSAGN----------GRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKN-------STGDNDVRGSGMVRGDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRPTSAGGRG---RAGR------------MARGDRVEASYRGKGTKFYKG 3066
            GDRVEARY+  G+ +YKG ISRVN+D + ++ YDDG+KE  +A+  VR L     GGGGR+                G  +  GDRVE RY+G G K+YKGKI+RVN+DG+ +I YDDG++E  +A   VR L      GG    GGR         G  +  GD+VE RY+G G+K+YKGKISR+N+D + +I YDDG++E  IA   VR L  S   GGR  S         L EGD VEA ++   ++Y G+ISRVN DG+++IDYDDG++ER V    +R    G +     R  G           G L  GDRVEARY+G G K+YKG+ISRVN+ G+++I YDDG++E  IA   VR LE          S+   D  G  +  GDRVE RY+G G+K+YKGKISRVN+D + +I YDDG++E  +    VR L      GGRG   R GR            +  GDRVEA Y+G G+K+YKG
Sbjct: 1497 GDRVEARYKG-GSKYYKGKISRVNADGSYNIDYDDGDKERRVASSKVRKL-----GGGGRSSPRRGGRGDIDTEDDAGGILREGDRVEARYKG-GAKWYKGKITRVNADGSYNIDYDDGDQERRVASSKVRKLGGGAGRGGSPRRGGRDEFDTEDDAGGVLREGDRVEARYKG-GSKYYKGKISRINADGSYNIDYDDGDQERRIAPSKVRKLGGSPRRGGRPSSDTEDDAGGVLREGDRVEARYKGGSKYYKGKISRVNADGSYNIDYDDGDQERRVAASKVRKLGGGGARAGSPRRGGRDELDTEDDAGGALREGDRVEARYKG-GFKWYKGRISRVNADGSYNIDYDDGDQERRIAPSKVRKLEGNKPGRGGRPSSDTEDDAGGVLREGDRVEARYKG-GSKYYKGKISRVNADGSYNIDYDDGDQERRVIPSKVRKL----GGGGRGSPRRGGRDEIDTEDDAGGVLREGDRVEARYKG-GSKYYKG 1972
[Close]
BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Match: A0A833SSE4_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SSE4_PHYIN)

HSP 1 Score: 325 bits (832), Expect = 4.830e-89
Identity = 209/446 (46.86%), Postives = 269/446 (60.31%), Query Frame = 1 
Query: 1768 FTRGDRVEARYRSRGTNFYKGTISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRT---RGSTMARGDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSLEPKTNAGGGGG----RGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIAYDDGEKEIGIAAEHVRSLQQSTSEGGRGGSGRARALTLMEGDEVEANFRSRGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRA-SDRGSSHRDEGRSAGNGRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIGIAAEHVRSLEPKNS-TGDNDVRGSGMVRGDRVEVRYRGKGTKFYKGKISRVNSDDTMDIAYDDGEKEIGIAAEHVRSLDRPTSAGGRG----RAGRMARGDRVEASYRGKGTKFYKG 3066
            F  GD+VEA+Y+ + + FY G ISR   + T D+ YDDGEKE G+A E +R L  G  GGG      +      GD+VE +Y+GK +KFY G ISR   +GT DI YDDGEKE G+A E +R L  K   GGG      +      GDKVE +Y+GK +KFY G ISR   + T DI YDDGEKE G+AAE +R L +    GG       +     EGD+VEA ++ + +FYPG ISR  L+GT+DIDYDDGEKE GV  +LIR    +G    D+       +   GD+VEA+Y+G+ +KFY G ISR    GT+DI YDDGEKE G+AAE +R L  K     D+D +      GD+VE +Y+GK +KFY G ISR   + T DI YDDGEKE G+AAE +R L +    GG      +  +   GD+VEA Y+GK +KFY G
Sbjct: 1476 FREGDKVEAQYKGK-SKFYPGVISRCRLNGTYDIDYDDGEKETGVAAELIRLL--GKKGGGDSDDDPKQKKFREGDKVEAQYKGK-SKFYPGVISRCRLNGTYDIDYDDGEKETGVAAELIRLLGKK---GGGDSDDDPKQKKFREGDKVEAQYKGK-SKFYPGVISRCRLNGTYDIDYDDGEKETGVAAELIRLLGKK---GGGDSDDDPKQKKFREGDKVEAQYKGKSKFYPGVISRCRLNGTYDIDYDDGEKETGVAAELIRLLGKKGGGDSDD--DTKQKKFREGDKVEAQYKGK-SKFYPGVISRCRLNGTYDIDYDDGEKETGVAAELIRLLGKKGGGDSDDDPKQKKFREGDKVEAQYKGK-SKFYPGVISRCRLNGTYDIDYDDGEKETGVAAELIRLLGK--KGGGDSDDDPKQKKFREGDKVEAQYKGK-SKFYPG 1903
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11262.1124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEH4_ECTSI0.000e+080.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBA5_9PHAE0.000e+079.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJS9_9PHAE1.150e-16166.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG68_ECTSI1.030e-11559.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4A011_9STRA1.520e-9947.26Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A835ZKM7_9STRA2.580e-9944.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4A0H1_9STRA6.590e-9348.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2SZP4_9STRA1.120e-9147.84Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2R5GDF6_9STRA1.470e-9044.60Cytidine deaminase n=1 Tax=Hondaea fermentalgiana ... [more]
A0A833SSE4_PHYIN4.830e-8946.86Uncharacterized protein n=1 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11262contigEcto-sp13_S_contig11262:2..5493 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score1380.5
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LEH4
Preferred nameCDA
Model size3066
KEGG rclassRC00074,RC00514
KEGG koko:K01489
KEGG ReactionR01878,R02485,R08221
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0001558,GO:0001775,GO:0001882,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004126,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006140,GO:0006206,GO:0006213,GO:0006216,GO:0006217,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0008150,GO:0008152,GO:0008270,GO:0008655,GO:0009056,GO:0009058,GO:0009112,GO:0009116,GO:0009119,GO:0009120,GO:0009163,GO:0009164,GO:0009451,GO:0009790,GO:0009792,GO:0009892,GO:0009972,GO:0009987,GO:0010563,GO:0012505,GO:0016043,GO:0016070,GO:0016192,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019239,GO:0019438,GO:0019439,GO:0019858,GO:0022607,GO:0023052,GO:0030141,GO:0030308,GO:0031323,GO:0031324,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032501,GO:0032502,GO:0032940,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0034774,GO:0036094,GO:0036230,GO:0040008,GO:0042119,GO:0042454,GO:0042455,GO:0042802,GO:0042803,GO:0043094,GO:0043097,GO:0043167,GO:0043169,GO:0043170,GO:0043174,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0045926,GO:0045934,GO:0045936,GO:0045980,GO:0046087,GO:0046092,GO:0046108,GO:0046109,GO:0046121,GO:0046125,GO:0046127,GO:0046131,GO:0046132,GO:0046133,GO:0046134,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0046903,GO:0046914,GO:0046983,GO:0047844,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051716,GO:0055086,GO:0060205,GO:0062012,GO:0062014,GO:0065003,GO:0065007,GO:0070013,GO:0070820,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097708,GO:0099503,GO:0101002,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659,GO:1904724,GO:1904813
Exons7
EggNOG free text desc.cytidine deaminase activity
EggNOG OGsCOG0295@1,KOG0833@2759
EC3.5.4.5
Cds size3036
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11262.1124.1prot_Ecto-sp13_S_contig11262.1124.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11262 643..5493 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462588.704173-UTR-Ecto-sp13_S_contig11262:1..281681462588.704173-UTR-Ecto-sp13_S_contig11262:1..28Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11262 2..28 +
1681462588.7179165-UTR-Ecto-sp13_S_contig11262:639..6421681462588.7179165-UTR-Ecto-sp13_S_contig11262:639..642Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig11262 640..642 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462588.7271152-CDS-Ecto-sp13_S_contig11262:642..7231681462588.7271152-CDS-Ecto-sp13_S_contig11262:642..723Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11262 643..723 +
1681462588.7361705-CDS-Ecto-sp13_S_contig11262:964..11551681462588.7361705-CDS-Ecto-sp13_S_contig11262:964..1155Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11262 965..1155 +
1681462588.7451274-CDS-Ecto-sp13_S_contig11262:1356..15941681462588.7451274-CDS-Ecto-sp13_S_contig11262:1356..1594Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11262 1357..1594 +
1681462588.7589-CDS-Ecto-sp13_S_contig11262:2045..23091681462588.7589-CDS-Ecto-sp13_S_contig11262:2045..2309Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11262 2046..2309 +
1681462588.7671728-CDS-Ecto-sp13_S_contig11262:2648..31691681462588.7671728-CDS-Ecto-sp13_S_contig11262:2648..3169Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11262 2649..3169 +
1681462588.775514-CDS-Ecto-sp13_S_contig11262:3752..54931681462588.775514-CDS-Ecto-sp13_S_contig11262:3752..5493Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11262 3753..5493 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11262.1124.1

>prot_Ecto-sp13_S_contig11262.1124.1 ID=prot_Ecto-sp13_S_contig11262.1124.1|Name=mRNA_Ecto-sp13_S_contig11262.1124.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1012bp
MGKKYADMDDYVKRLDRDRVRLVTKLKVVFDRFDKSGEGTISAANARDAL
LYMGRDVTGEACASWLADRERHRGDSGGQGGDISFVDFSTAYSALFTDED
PYIDLRERWGPGGGPKEQGVSVTGSGHVRLRQKKSAQGRGDGAHGSWAPG
SSEDEGGFRTGSSRHSPHRKTPRGGGGEDASNDGDDHYRDNAQAEAFEAL
RSVKKLAEVKRVFDRFAVDGMLTAYEALQALTEAGCTAPRTHAGRYLRSR
RFFGLRREVTFFEFLRSMAALGVHDSGAHVAGFAPSMIPLGGSGSSIPFR
ARHSSRGPRDDDDDDDDDEYISVSGKRGGGRSGSRRRTRRRGRSGEGRAY
DDDNEDQGGSTSTSADGEDDRRRRSPAPRRGVSPKRVVGAGGVTRRRGLG
SGSGGGYGETRSSGSAPRKRRPSYSPQRSRSRSRYGREGGRRLPSEESDT
GGDGDRSDGSASTSRGRGRRGSVPREERGGRERQQTRSRGGGRETEDDDH
DRIRDRDRHREKHRAGGRPSDCDKLRERESGRGAGSGSGSDGAKGPSSAR
SRRKASSPSGDESSKGRSGQETRGGPASSFTRGDRVEARYRSRGTNFYKG
TISRVNSDDTVDVAYDDGEKEIGIATEHVRSLEPGASGGGGRTRGSTMAR
GDRVEVRYRGKGTKFYKGKISRVNSDGTMDISYDDGEKEIGIAPEHVRSL
EPKTNAGGGGGRGLAMARGDKVEVRYRGKGTKFYKGKISRVNSDYTMDIA
YDDGEKEIGIAAEHVRSLQQSTSEGGRGGSGRARALTLMEGDEVEANFRS
RGRFYPGRISRVNLDGTFDIDYDDGEKERGVTDDLIRASDRGSSHRDEGR
SAGNGRLERGDRVEARYRGRGTKFYKGKISRVNSRGTFDISYDDGEKEIG
IAAEHVRSLEPKNSTGDNDVRGSGMVRGDRVEVRYRGKGTKFYKGKISRV
NSDDTMDIAYDDGEKEIGIAAEHVRSLDRPTSAGGRGRAGRMARGDRVEA
SYRGKGTKFYKG
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mRNA from alignment at Ecto-sp13_S_contig11262:2..5493+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11262.1124.1 ID=mRNA_Ecto-sp13_S_contig11262.1124.1|Name=mRNA_Ecto-sp13_S_contig11262.1124.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5492bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11262:2..5493+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAAATCAAGGACAAGGAGGAAGAGGAGGTACGCAAGCAATGGTAGCCCGC
GTGTTCATGTCCTCTCTCTTGGCCGCCTTGGCATCGTTTGTCTCACACCA
GCTTGTTGGTCGAACTTGTCCTTGTCCTAGGCGGAGAGCGTATATTTTGA
ATGTTGAAAGTGGCGCTCGACCACATACAAGACGGCACGTTCACGAGACC
AGCATTGGAGGGTCAACTAAATATAAGCAAACGTTTGTGGGCGGGTATTG
CTGTATTCAGAGGTCGATTTCGAGCTGATCCAGTCACGAACGACAGTTCT
TGAGGCCGAGAGAAGAATATTACAAATCGTATGCAGCACCAGTCTGAAGG
AGAGGAGAGGGGGCACTCAGGCTGCGTGCTCTGCACGTACACCTCCGTCC
TCGCCTGTTCCTTTTGAAATTTCACATAGGAAGTTGAGCAATGGTTTGAT
AGATCGCCTTGGATGTATGTAAGTCACTTGAAGGGGTCAGACCCCTATCC
TGATTATATTTTCTTAGTGGGACTACTGTGCAGTACGCATGCAATACGAC
AAACACGAACACATGTACCCCCTCCCCATCTTGCACCATCGATTCTGGTA
CGGCCTGCGCGACGACCTCGTTCGCATGATCGCTTCAGCAGATGGGCAAG
AAGTACGCCGACATGGACGACTACGTGAAGCGCTTAGACAGAGATCGCGT
CCGCCTCGTGACCAAGCTCAAGGTAAAGGATTTATATGTTCAGATCGGGG
GACACATCGCCATTAGAAAACAGCTACGCCAGCGCCGCCTTACCTGGTGC
CTCATTCACGGAAGCCAACTAATACATTTCAACACGAGTTAATCAGCCAT
AGTCGCAAGTGCCTCTTCCGACCCTCACATTCTCAACAACACTTCGACTA
CACACCTACCGCCCGCTTCACCCCTTTCACCACGCTTTGGTCGTATCCTA
ACCCCAACTGCAGGTGGTCTTCGACCGCTTCGACAAGAGCGGAGAGGGTA
CCATATCCGCCGCCAACGCGCGCGATGCGCTGCTGTACATGGGTCGCGAC
GTCACCGGGGAGGCGTGCGCCTCGTGGCTGGCGGACAGGGAGAGACATCG
CGGCGACAGTGGGGGCCAGGGCGGCGACATATCATTCGTAGACTTTTCTA
CTGCGTGAGTGAATCAAGCGGATGATTTCGTCGCAACGTCACCACTCGGA
GGCCATGAGATGACCGGCTTGCCGCGCCAACGTTGCTGACCTAAGAAGCG
TTTCGTTAACCTTGAGCGCACATCGATACTTGAAACGATGGACGCAGCCG
CACACTTATTGGGTCCCACCTTTCCATTGCGGCATGCGAACACAACTTGT
TCCAGGTACTCTGCTCTTTTCACCGACGAGGACCCATATATAGACTTACG
TGAAAGATGGGGTCCCGGGGGCGGTCCCAAGGAGCAGGGCGTATCGGTGA
CGGGGTCAGGCCATGTCCGTCTTAGGCAGAAGAAGTCGGCCCAAGGTCGC
GGCGACGGGGCACACGGGTCGTGGGCGCCAGGAAGTTCCGAGGACGAAGG
AGGGTTTCGGACAGGGAGCAGCAGGCATTCACCCCATCGAAAGGTGATAG
CCCGTCGACTTCAGCAGTGGAAGCGCAACTCGCAAAAGAACAGCAGTGCA
GAAGGACAAGTTTAATTTCCACAAGACGGCAGCAAATTTTTCTCAGTAGA
ACTTTTCTATTCGGTGGGGTAATGGGCCGTGATTTGCCAGTGCGTCGACG
CTCAGAAAACAATCCACAGTGCGTCGAGCCGACGTACGGCGAAATTTAGT
TGTTCTGCCGTTGTAGAAAGAAAAGTGGTCAGTCAACAGAATTCCCAAAC
CATTCTGCCTCCCTTGGCTGAACAAGGGCACCTGAATCTGAAGCAGGAGC
TAATCCACGGCTAAAACAACATGATGTAACTCACGACGTTGAATATTGTC
ACCCGCGAACGCCTTTCCACGTACTCTCACTAATCATATCGAATCCTCGG
CCTTCAAACCGATCGATTCGTGTCCACCGAACCTGCTCATGAAGACCCCC
CGAGGAGGCGGTGGCGAGGACGCCAGCAACGACGGAGATGATCACTACCG
CGACAATGCACAAGCTGAGGCCTTCGAAGCCCTCCGATCGGTGAAAAAGC
TGGCAGAAGTGAAGCGTGTGTTTGACCGGTTCGCCGTGGACGGCATGCTG
ACCGCCTACGAGGCCCTGCAAGCGCTAACAGAGGCCGGGTGCACGGCGCC
GAGGACGCACGCTGGACGATACCTGCGCTCTCGGCGCTTCTTCGGCTTGC
GCAGAGAGGTGTGCTTCCGGGGGGGTTGACAGTCGCCCTCTCAGGAGATT
TGACGGGCGCAAGTGGTTTGGGGATGGTAGGGGCACTTGTTTAAGGGAAG
GTTGTTTATTTCCGTCTTCATGGTTCCCTCACCTGGTTCTTCGACGACCA
ACAAACAGCGTCGTTTCGGAATGGAGCGATGGAAAGCGCCGGATGGGTTC
TAATACCTTGAGCGGATACTCATGCCATGAGAAGTGTCTACCGACTATTG
TCCAAAAAAATTCCGCTCGTCTAGCCTTCAACCAATTCCCGAAACGTGGG
ACGTTTCACACTAGCCGAACTCCCAATTTACGCGCCTAACGACCCAGGTC
ACCTTCTTCGAATTTTTACGATCAATGGCCGCGCTCGGAGTCCACGATTC
CGGGGCACATGTTGCCGGCTTTGCGCCTTCGATGATACCTCTTGGCGGCA
GTGGAAGTAGTATCCCATTCAGAGCCCGCCATAGCAGTCGAGGACCGAGA
GACGACGACGACGACGACGACGACGACGAGTACATAAGCGTCAGTGGTAA
ACGTGGAGGCGGCAGAAGTGGCAGCCGCAGGCGAACAAGGCGGCGAGGAC
GCTCCGGAGAAGGAAGAGCCTACGACGACGACAACGAAGACCAAGGAGGT
TCCACCAGCACGAGTGCTGACGGCGAAGACGACCGACGCCGGCGCAGCCC
AGCCCCTCGGCGGGGGGTATCGCCTAAAAGGGTCGTGGGGGCGGGGGGGG
TGACCCGCCGGCGAGGGCTCGGTAGCGGTAGCGGCGGCGGCTACGGCGAG
ACGAGAAGCTCTGGATCGGCGCCGAGAAAGCGACGACCTAGCTATTCTCC
TCAGAGATCGAGGAGCCGGTTGGCGGATTCGGGTGTAAGTGGTTCCGATA
TCGAGGACGACAACGACGGCTCTCCCTCCCGGAGAGGAAGACGAGCCATG
AGGCACAAGCGCGACAAGCATGGGTCCAGTAGGTGCAAAAATACGTTCAA
GGTTTGATGCGACGTAGGAAATGGTCGAGAGTTCCCCCTGCACACGGTGC
TGGTTTCAGCTTGTCTTCGAAAAAGCAGAAATCATCCAGCCTGTGAGTGT
TGTAGGTGAACACGTGCAAGCGTGCGGGTAAATACATCCGATGAACGACG
CGCCGTCCTTCCCACACTTCATGGCCACGGAATTTCTCTGGAACGCGTTC
CTTCGACCATTCTTCGTGGCGCACTTGTGACGAAGTCGCGCGAGCTTGGA
CTATGTTGTTGAGGCACACGGCACTGCAGCACTCAGAAGAACGGCGCGTC
CGAAGGAGGCCGGCGTTTAGTCCAGACCATGCGCCTCACATCGTTTTCCA
AGAGCACTTACCGTCCCCGCTACCTCTCACCGAAAACGTGCCACAAGAAC
GTCGTGTTGATCGCGCCCGTGCCACCTCTGCTGCTGCTACTGGTGGAGCA
GGTCACGGTACGGGCGGGAGGGTGGAAGAAGGTTGCCATCCGAGGAGAGC
GACACCGGTGGTGACGGTGACCGAAGTGACGGCAGTGCGTCTACAAGCAG
AGGTAGAGGCCGTCGCGGCAGTGTGCCGCGGGAGGAGCGTGGTGGTCGCG
AGCGACAGCAAACCAGGAGTCGCGGAGGGGGTCGCGAAACCGAGGACGAC
GATCACGACCGCATCCGCGACCGAGATCGACACCGGGAAAAGCATCGTGC
GGGTGGTCGGCCTTCAGACTGCGATAAACTGAGGGAGAGAGAGAGCGGGC
GGGGTGCCGGTAGCGGCAGCGGCAGCGACGGAGCAAAGGGGCCAAGTTCG
GCCAGGTCTCGTCGCAAGGCGAGCTCGCCTAGCGGGGACGAGTCGAGTAA
AGGGCGCAGTGGCCAAGAAACACGAGGCGGGCCCGCTAGCAGCTTTACCC
GTGGAGATAGAGTCGAGGCGAGATATCGCTCTCGTGGTACAAATTTTTAC
AAGGGCACCATTTCCAGAGTCAACAGCGACGATACCGTCGATGTAGCATA
CGATGATGGAGAGAAAGAGATTGGCATTGCGACAGAGCACGTTCGATCTT
TGGAACCAGGGGCAAGTGGCGGTGGCGGTAGGACGAGAGGAAGCACCATG
GCTAGGGGGGACAGAGTAGAGGTCAGATACCGCGGGAAGGGAACCAAGTT
CTACAAGGGCAAGATCTCACGCGTGAACTCCGACGGCACTATGGACATTT
CGTATGACGATGGTGAGAAGGAGATTGGGATTGCACCAGAGCATGTTCGA
TCTTTGGAGCCGAAAACAAACGCAGGTGGTGGCGGGGGAAGGGGCCTCGC
AATGGCCAGGGGAGATAAAGTCGAGGTGAGGTACCGTGGGAAGGGGACCA
AGTTCTACAAGGGCAAGATATCGCGGGTCAACTCCGATTACACCATGGAC
ATAGCCTACGATGATGGTGAGAAGGAGATTGGGATCGCGGCCGAGCACGT
TCGATCCTTGCAGCAGTCAACCAGTGAAGGTGGACGTGGTGGTAGCGGTA
GAGCAAGGGCTCTGACGTTGATGGAAGGGGACGAGGTCGAGGCCAACTTC
CGAAGTCGGGGGAGGTTCTATCCGGGACGAATCAGCAGGGTCAACTTGGA
TGGAACCTTCGATATCGACTATGACGACGGTGAGAAGGAACGCGGGGTCA
CAGACGATCTGATCCGGGCCAGCGATCGAGGAAGCTCTCACCGCGATGAG
GGTCGAAGCGCGGGAAATGGTAGGCTCGAGAGGGGAGACAGAGTCGAGGC
GAGGTACCGTGGAAGGGGGACCAAGTTCTACAAGGGCAAGATATCGCGGG
TCAACTCCCGCGGCACGTTCGATATTTCCTATGATGATGGCGAGAAGGAG
ATTGGGATCGCGGCGGAGCACGTTCGATCGTTGGAGCCGAAGAACAGCAC
AGGCGACAATGACGTGAGAGGAAGCGGGATGGTCAGGGGAGACAGGGTCG
AGGTGAGATACCGCGGGAAGGGTACGAAGTTCTACAAGGGCAAGATCTCG
CGGGTCAATTCCGACGACACCATGGACATAGCTTACGATGATGGTGAGAA
GGAGATTGGGATTGCAGCGGAGCACGTTCGATCTTTGGACCGGCCAACTA
GTGCAGGTGGCCGTGGTAGGGCGGGGAGGATGGCCAGGGGAGACAGAGTC
GAGGCGAGTTACCGCGGGAAGGGTACCAAGTTCTACAAAGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11262:2..5493+

>mRNA_Ecto-sp13_S_contig11262.1124.1 ID=mRNA_Ecto-sp13_S_contig11262.1124.1|Name=mRNA_Ecto-sp13_S_contig11262.1124.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3036bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11262:2..5493+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCAAGAAGTACGCCGACATGGACGACTACGTGAAGCGCTTAGACAG
AGATCGCGTCCGCCTCGTGACCAAGCTCAAGGTGGTCTTCGACCGCTTCG
ACAAGAGCGGAGAGGGTACCATATCCGCCGCCAACGCGCGCGATGCGCTG
CTGTACATGGGTCGCGACGTCACCGGGGAGGCGTGCGCCTCGTGGCTGGC
GGACAGGGAGAGACATCGCGGCGACAGTGGGGGCCAGGGCGGCGACATAT
CATTCGTAGACTTTTCTACTGCGTACTCTGCTCTTTTCACCGACGAGGAC
CCATATATAGACTTACGTGAAAGATGGGGTCCCGGGGGCGGTCCCAAGGA
GCAGGGCGTATCGGTGACGGGGTCAGGCCATGTCCGTCTTAGGCAGAAGA
AGTCGGCCCAAGGTCGCGGCGACGGGGCACACGGGTCGTGGGCGCCAGGA
AGTTCCGAGGACGAAGGAGGGTTTCGGACAGGGAGCAGCAGGCATTCACC
CCATCGAAAGACCCCCCGAGGAGGCGGTGGCGAGGACGCCAGCAACGACG
GAGATGATCACTACCGCGACAATGCACAAGCTGAGGCCTTCGAAGCCCTC
CGATCGGTGAAAAAGCTGGCAGAAGTGAAGCGTGTGTTTGACCGGTTCGC
CGTGGACGGCATGCTGACCGCCTACGAGGCCCTGCAAGCGCTAACAGAGG
CCGGGTGCACGGCGCCGAGGACGCACGCTGGACGATACCTGCGCTCTCGG
CGCTTCTTCGGCTTGCGCAGAGAGGTCACCTTCTTCGAATTTTTACGATC
AATGGCCGCGCTCGGAGTCCACGATTCCGGGGCACATGTTGCCGGCTTTG
CGCCTTCGATGATACCTCTTGGCGGCAGTGGAAGTAGTATCCCATTCAGA
GCCCGCCATAGCAGTCGAGGACCGAGAGACGACGACGACGACGACGACGA
CGACGAGTACATAAGCGTCAGTGGTAAACGTGGAGGCGGCAGAAGTGGCA
GCCGCAGGCGAACAAGGCGGCGAGGACGCTCCGGAGAAGGAAGAGCCTAC
GACGACGACAACGAAGACCAAGGAGGTTCCACCAGCACGAGTGCTGACGG
CGAAGACGACCGACGCCGGCGCAGCCCAGCCCCTCGGCGGGGGGTATCGC
CTAAAAGGGTCGTGGGGGCGGGGGGGGTGACCCGCCGGCGAGGGCTCGGT
AGCGGTAGCGGCGGCGGCTACGGCGAGACGAGAAGCTCTGGATCGGCGCC
GAGAAAGCGACGACCTAGCTATTCTCCTCAGAGATCGAGGAGCCGGTCAC
GGTACGGGCGGGAGGGTGGAAGAAGGTTGCCATCCGAGGAGAGCGACACC
GGTGGTGACGGTGACCGAAGTGACGGCAGTGCGTCTACAAGCAGAGGTAG
AGGCCGTCGCGGCAGTGTGCCGCGGGAGGAGCGTGGTGGTCGCGAGCGAC
AGCAAACCAGGAGTCGCGGAGGGGGTCGCGAAACCGAGGACGACGATCAC
GACCGCATCCGCGACCGAGATCGACACCGGGAAAAGCATCGTGCGGGTGG
TCGGCCTTCAGACTGCGATAAACTGAGGGAGAGAGAGAGCGGGCGGGGTG
CCGGTAGCGGCAGCGGCAGCGACGGAGCAAAGGGGCCAAGTTCGGCCAGG
TCTCGTCGCAAGGCGAGCTCGCCTAGCGGGGACGAGTCGAGTAAAGGGCG
CAGTGGCCAAGAAACACGAGGCGGGCCCGCTAGCAGCTTTACCCGTGGAG
ATAGAGTCGAGGCGAGATATCGCTCTCGTGGTACAAATTTTTACAAGGGC
ACCATTTCCAGAGTCAACAGCGACGATACCGTCGATGTAGCATACGATGA
TGGAGAGAAAGAGATTGGCATTGCGACAGAGCACGTTCGATCTTTGGAAC
CAGGGGCAAGTGGCGGTGGCGGTAGGACGAGAGGAAGCACCATGGCTAGG
GGGGACAGAGTAGAGGTCAGATACCGCGGGAAGGGAACCAAGTTCTACAA
GGGCAAGATCTCACGCGTGAACTCCGACGGCACTATGGACATTTCGTATG
ACGATGGTGAGAAGGAGATTGGGATTGCACCAGAGCATGTTCGATCTTTG
GAGCCGAAAACAAACGCAGGTGGTGGCGGGGGAAGGGGCCTCGCAATGGC
CAGGGGAGATAAAGTCGAGGTGAGGTACCGTGGGAAGGGGACCAAGTTCT
ACAAGGGCAAGATATCGCGGGTCAACTCCGATTACACCATGGACATAGCC
TACGATGATGGTGAGAAGGAGATTGGGATCGCGGCCGAGCACGTTCGATC
CTTGCAGCAGTCAACCAGTGAAGGTGGACGTGGTGGTAGCGGTAGAGCAA
GGGCTCTGACGTTGATGGAAGGGGACGAGGTCGAGGCCAACTTCCGAAGT
CGGGGGAGGTTCTATCCGGGACGAATCAGCAGGGTCAACTTGGATGGAAC
CTTCGATATCGACTATGACGACGGTGAGAAGGAACGCGGGGTCACAGACG
ATCTGATCCGGGCCAGCGATCGAGGAAGCTCTCACCGCGATGAGGGTCGA
AGCGCGGGAAATGGTAGGCTCGAGAGGGGAGACAGAGTCGAGGCGAGGTA
CCGTGGAAGGGGGACCAAGTTCTACAAGGGCAAGATATCGCGGGTCAACT
CCCGCGGCACGTTCGATATTTCCTATGATGATGGCGAGAAGGAGATTGGG
ATCGCGGCGGAGCACGTTCGATCGTTGGAGCCGAAGAACAGCACAGGCGA
CAATGACGTGAGAGGAAGCGGGATGGTCAGGGGAGACAGGGTCGAGGTGA
GATACCGCGGGAAGGGTACGAAGTTCTACAAGGGCAAGATCTCGCGGGTC
AATTCCGACGACACCATGGACATAGCTTACGATGATGGTGAGAAGGAGAT
TGGGATTGCAGCGGAGCACGTTCGATCTTTGGACCGGCCAACTAGTGCAG
GTGGCCGTGGTAGGGCGGGGAGGATGGCCAGGGGAGACAGAGTCGAGGCG
AGTTACCGCGGGAAGGGTACCAAGTTCTACAAAGGC
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