mRNA_Ecto-sp13_S_contig11250.1114.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11250.1114.1
Unique NamemRNA_Ecto-sp13_S_contig11250.1114.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 5.040e-76
Identity = 134/284 (47.18%), Postives = 182/284 (64.08%), Query Frame = 1
Query:    1 KGTPGARASSTVDRTPISAPRSRLKGDKIVAFMQSWVDTYGQNMPNNGNIFLYAANKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTD-RGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGETLEDVVFQVDNTVAENKNNYLLGCLGLLV 849
            K TP A+ASS+V R  I++ R R K + +VAF+    D YGQ MPN+   +LY  +K E+Y  Y    R L+  DP+SL E L S  YFN+VW+AH   +K+K  GDFMLCE CT LK  +HG+ G R V D+A R+R+QS Y +H++++  DR   AR+E +A  AK++G P +  Y  +DAA Q  F+ P  +   HG D RG+ ERQKIY  L  G  + V  +PQILGTGSN+VCT L+   M+L   +  +L DV  Q+DNTV+ENKNN+++G L  LV
Sbjct:  226 KKTPKAQASSSVHRASIASTRDRPKLEGVVAFLHRHEDMYGQKMPNSDQSYLYLKSKLELYEEYSKNTRELYGQDPASLAERLCSKNYFNQVWSAHFGNLKLKPNGDFMLCEICTLLKEKIHGQAGSRGVLDEAERERHQSVYKEHLQDVERDRMYGARLENQAAVAKSNGTPWETVYLQVDAANQSNFATPIGASQAHGVDDRGYAERQKIYGALVSGIMMQVFMIPQILGTGSNMVCTTLFTLFMELTLQWKHSLGDVFIQMDNTVSENKNNFIMGFLAALV 509          
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: A0A6H5KL03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL03_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 4.760e-50
Identity = 100/228 (43.86%), Postives = 142/228 (62.28%), Query Frame = 1
Query:  172 EEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHG-EPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTD-RGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGETLEDVVFQVDNTVAENKNNYLLGCLGLLV 849
            +E++  Y  + R+    +   L  AL +  YF K+WA   P +K+K  GDFMLC+ CT LK  + G + G R +QD+A +   + EY+ H+++++ DR+ IA+++  A+ AK +G P +  Y  MD A    F+VP      HG D +G+ ER K+Y VL  G  ++V F PQILGTG+NLV TALY Q M+L   +G TL DV  QVDNTV+ENKNNYL+G L  +V
Sbjct:   12 QELFDEYESQTRKELHGELVGLDAALCTRQYFKKIWAEEFPHLKVKPSGDFMLCKICTLLKSAIFGTQSGSRGIQDEAEKNLKRKEYEDHMEDVSNDRKAIAKLKTAAENAKMNGVPWEQPYCMMDGANSNNFTVPLSKDKAHGIDDKGYGERAKVYGVLVAGVVMNVFFAPQILGTGTNLVATALYYQFMELTLSWGHTLGDVTVQVDNTVSENKNNYLMGILAAMV 239          
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 9.480e-46
Identity = 97/248 (39.11%), Postives = 143/248 (57.66%), Query Frame = 1
Query:  130 MPNNGNIFLYAANKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGET--------LEDVVFQVDNTVAENKNNYLLGCLGLLV 849
            MP+  ++ + ++NKEE+Y  +  E +R++ +D S      VS  +F ++     P ++++V G+FM C+ C  LK   HG PG +P  D +A      +   H + + ADR VIA     A  AKADG+P  F + S+DAA     ++PA+   THG DRG+ ERQKI AV  EG  V V F PQ LG G NL CTA +L + ++++ Y ++        ++   +QVDN V+ENKNN+ LG  GLLV
Sbjct:    1 MPHKDHVVICSSNKEELYQDFLTEAKRVYPEDTSKR----VSKAHFFRIPRKDRPHIRVRVGGEFMKCDICVTLKERRHGSPGVKPSLDSSALASIDRDLAAHRQMVQADRLVIANRTGDAMRAKADGKPLNFVFMSIDAANSTSHALPAIYPPTHGGDRGYSERQKIMAVHIEGQFVEVYFTPQYLGGGCNLACTAAHLAITRIIDKYHDSPPHPSGCIIQHAHWQVDNCVSENKNNFFLGYAGLLV 244          
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: D8LJG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG9_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 4.350e-41
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1
Query:  478 MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTG 699
            MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTG
Sbjct:    1 MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTG 74          
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: A0A6H5L233_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L233_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 3.750e-7
Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 1
Query:  697 GSNLVCTALYLQLMKLVEDYGETLEDVVFQVDNTVAENKNNYLLGCLGLLV 849
            G+NLV TAL+ Q M+L   +G TL DV   VDNTVAEN NNY +G L  +V
Sbjct:    6 GTNLVATALHYQFMELTLSWGHTLVDVTVHVDNTVAENMNNYFMGILAAMV 56          
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI000A2A9391 (uncharacterized protein LOC110242855 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9391)

HSP 1 Score: 57.8 bits (138), Expect = 9.830e-6
Identity = 67/284 (23.59%), Postives = 112/284 (39.44%), Query Frame = 1
Query:   73 KGDKIVAFMQSWVDTYGQNMPNNGNIFLYAA-NKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDR---GWPERQKIYAVLTEGHSVSVSFVPQILGTG--------------------SNLVCTALYLQLMKLVEDYGETLEDVVF-QVDNTVAENKNNYLLGCLGLLV 849
            K    +A++Q + +T G + P++  I L +  +K  IY    DE  + +           VS ++F  +W  H   V I     F  C  CTR K L    P QR   +K        E + H+  +  +R V      +A+                      KF    ++++  G D+     P+ ++I   L+   +V+   V  I+ +G                    SNL  T L   LM+  ++Y   L  +++ Q+DN   ENKN ++L  L L+V
Sbjct:  310 KTGDCIAWLQYFFNTIGDHQPDSNAIHLPSCFSKIAIYKKMLDENTQFN--------HPTVSLSHFYNIWXQHFRNVTIPKENRFTKCTECTRFKNLKEQHPSQRDSINK--------ELNDHLDLVWQERRVYYMHRYKAR----------------------KFPQKYMTIIDDGMDQKTTNIPKVRRISKALSSLTNVNTHLVGAIVHSGQATHGKEIYGSFDFYQWPHDSNLNMTVLLSTLMEWCKNY--KLPPILYLQMDNCWRENKNQFMLALLALMV 553          
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI0009E2E69B (uncharacterized protein LOC110062891 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2E69B)

HSP 1 Score: 57.4 bits (137), Expect = 1.240e-5
Identity = 70/265 (26.42%), Postives = 108/265 (40.75%), Query Frame = 1
Query:   88 VAFMQSWVDTYGQNMPNNGNIFLYAA-NKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGT-DRGWPERQKIYAVLTEGHSVSVSFVPQILGT--------GSNLVCTALYLQLMKLVEDYGETLEDVVF-QVDNTVAENKNNYLLGCLGLLV 849
            +A++Q ++   GQ  P+N  I L +   +  IY   C+E +        S     +  + F  ++  H P V I     F  C  CTR K     E  ++ V DK ARQ       +H+  +  +R V           KA   P+++     DA  Q    +P +   T  T +        + A+   G S +      +LG+          NL  + L   L++  E Y   L  V++ Q+DN V ENKN Y+L  L LLV
Sbjct:  146 IAWLQFFISCVGQYQPDNKTIHLPSCFTRLSIYRRLCEENK--------SFNTPSIGLSQFYSIFHDHFPHVVIPKENRFTKCTDCTRYK-----EAKEKTV-DKKARQEIDRLLTEHMDLVWRERRVYY-----LHRYKARKHPSKYLTIIDDAMDQKTTCIPRVRRKTKATCNLATVGTHLVGAIFHSGQSPNGK---DVLGSFDYYQWPHDPNLSASVLLAMLVRWCEKY--LLPPVLYLQLDNCVKENKNQYILWLLALLV 386          
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI001CF352F5 (uncharacterized protein LOC114967703 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF352F5)

HSP 1 Score: 56.6 bits (135), Expect = 2.080e-5
Identity = 67/253 (26.48%), Postives = 99/253 (39.13%), Query Frame = 1
Query:   94 FMQSWVDTYGQNMPNNGNIFLYA-ANKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGETLEDVVFQVDNTVAENKNNYLLGCLGLLV 849
            +M+++    G  MP+ G + L +  +K  +YGY         K D     E ++  + F ++     P VKI     F  C+ CT L     GE  +R      AR R   +Y   + E   D ++  R        KA   P  F   + D   Q K  +P L V  H        R  +  VL  G      F        +NL    L  +L  + +D  +TL     Q+DN   ENKN ++L  L +LV
Sbjct:    5 WMEAFFTRVGDKMPDTGALHLPSFLDKSIMYGYM--------KADMEDDSEDIIHYSTFCQLLRDLFPHVKIPKVNRFTRCDYCTIL-----GEEKRR------ARDRDVRKYLDQLFEFHNDLQMKERKVYYHHREKAKKYPHDFACIAQDGMDQAKLLLPRLVVTAHAYASARKLRTHLTGVLNHGRQPKGYFDLFQFPHDANLTINILLFELESMGDDLPDTL---YLQMDNCWRENKNQFVLNFLAILV 235          
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI001CF5A32F (uncharacterized protein LOC114951988 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5A32F)

HSP 1 Score: 55.5 bits (132), Expect = 5.520e-5
Identity = 69/270 (25.56%), Postives = 111/270 (41.11%), Query Frame = 1
Query:   73 KGDKIVAFMQSWVDTYGQNMPNNGNIFLYAA-NKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGT-DRGWPERQKIYAVLTEGHSVSVSFVPQILGT--------GSNLVCTALYLQLMKLVEDYGETLEDVVF-QVDNTVAENKNNYLLGCLGLLV 849
            +  + +A+++ +V   GQ  P+N  I L +   +  IY   C+E +        S     +  + F  ++  + P V I     F  C  CTR K     E  ++ V DK ARQ       +H++ +  +R +           KA   P+++     DA  Q    +P +   T  T +        + A+   G S +      ILG+          NL  + L   L++  E Y   L  V++ Q+DN V ENKN Y+L  L LLV
Sbjct:  253 RSTECIAWLEFFVSCVGQYQPDNKAIHLPSCFTRLSIYQRLCEENK--------SFNTPSIGMSQFYSIFHDNFPHVFIPKENRFTKCTDCTRYK-----EEKEKTV-DKKARQEIDRLLTEHMELVWRERRIYY-----LHRYKARKHPSKYLTIIDDAMDQKTTCIPRVRRKTKATCNLATVGTHLVGAIFHSGQSPNGK---DILGSFDYYQWPHDPNLTASVLLCMLVRWCEKY--QLPPVLYLQLDNCVKENKNQYILWLLALLV 498          
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI0010696183 (uncharacterized protein LOC114541410 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI0010696183)

HSP 1 Score: 55.1 bits (131), Expect = 6.610e-5
Identity = 64/252 (25.40%), Postives = 98/252 (38.89%), Query Frame = 1
Query:   97 MQSWVDTYGQNMPNNGNIFLYAANKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGETLEDVVF-QVDNTVAENKNNYLLGCLGLLV 849
            M++     G  MP++  I L       I   Y  E  +   DDP       +  + F K+      +V I        C+ C  LK     E  Q+ + DK  R  Y   Y+QH +    +RE   +       AKA   P ++    +D   Q+K  +P L          W  +  +  VL  GH     F        SNL    L   L+++     + + D ++ Q+DN   ENKN Y++  LG+LV
Sbjct:    1 MKTSFSKMGDKMPDSIRIHLPCYLNYRILYNYMVEDLKAMGDDP-------ICYSQFCKLLETDFKEVTIPKVTRLTKCDICVILK-----EEKQKTL-DKTERNYYDVLYNQHNQLQREEREKYYK-----HRAKAKSDPKKYACIIIDGMDQMKLMIPQLLHQMKAYSSAWKLKTHLTGVLNHGHEAIGYFDLHQWAHDSNLTINVLLRVLLRM-----DKIPDRLYLQMDNCWRENKNQYVITFLGVLV 229          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JJG9_9PHAE5.040e-7647.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL03_9PHAE4.760e-5043.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUU1_9PHAE9.480e-4639.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG9_ECTSI4.350e-41100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L233_9PHAE3.750e-756.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000A2A93919.830e-623.59uncharacterized protein LOC110242855 n=1 Tax=Exaip... [more]
UPI0009E2E69B1.240e-526.42uncharacterized protein LOC110062891 n=1 Tax=Orbic... [more]
UPI001CF352F52.080e-526.48uncharacterized protein LOC114967703 n=1 Tax=Acrop... [more]
UPI001CF5A32F5.520e-525.56uncharacterized protein LOC114951988 n=1 Tax=Acrop... [more]
UPI00106961836.610e-525.40uncharacterized protein LOC114541410 n=1 Tax=Dendr... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11250contigEcto-sp13_S_contig11250:931..4257 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop0
Start0
Seed ortholog score67.4
Seed ortholog evalue1.2e-08
Seed eggNOG ortholog7739.XP_002600801.1
Model size852
KEGG koko:K19983
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs2CXPP@1,2RYXE@2759,3A0MY@33154,3BPZN@33208,3DCNG@33213
Cds size849
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11250.1114.1prot_Ecto-sp13_S_contig11250.1114.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11250 933..4257 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462587.8779387-CDS-Ecto-sp13_S_contig11250:932..10841681462587.8779387-CDS-Ecto-sp13_S_contig11250:932..1084Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11250 933..1084 -
1681462587.886795-CDS-Ecto-sp13_S_contig11250:1316..14051681462587.886795-CDS-Ecto-sp13_S_contig11250:1316..1405Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11250 1317..1405 -
1681462587.894546-CDS-Ecto-sp13_S_contig11250:1711..18751681462587.894546-CDS-Ecto-sp13_S_contig11250:1711..1875Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11250 1712..1875 -
1681462587.9031985-CDS-Ecto-sp13_S_contig11250:2247..25171681462587.9031985-CDS-Ecto-sp13_S_contig11250:2247..2517Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11250 2248..2517 -
1681462587.9270785-CDS-Ecto-sp13_S_contig11250:2790..29231681462587.9270785-CDS-Ecto-sp13_S_contig11250:2790..2923Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11250 2791..2923 -
1681462587.948445-CDS-Ecto-sp13_S_contig11250:4216..42571681462587.948445-CDS-Ecto-sp13_S_contig11250:4216..4257Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11250 4217..4257 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11250.1114.1

>prot_Ecto-sp13_S_contig11250.1114.1 ID=prot_Ecto-sp13_S_contig11250.1114.1|Name=mRNA_Ecto-sp13_S_contig11250.1114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp
KGTPGARASSTVDRTPISAPRSRLKGDKIVAFMQSWVDTYGQNMPNNGNI
FLYAANKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKV
KIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEI
TADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHG
TDRGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVE
DYGETLEDVVFQVDNTVAENKNNYLLGCLGLLV
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mRNA from alignment at Ecto-sp13_S_contig11250:931..4257-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11250.1114.1 ID=mRNA_Ecto-sp13_S_contig11250.1114.1|Name=mRNA_Ecto-sp13_S_contig11250.1114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3327bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11250:931..4257- (Ectocarpus species13 EcNAP12_S_4_19m)
AAAGGCACGCCAGGAGCGCGGGCGTCAAGCACCGTGGACAGGCAAGGAAC GAACGTACGATATACTTGTCTTGCTAACCTATCAATTATGGGTAAGTCTA CGTACATACATAGCTTTGGTTGGCGTGCAAATCTAACGGACAAAATTTGA ATCCACAGGACAGACACTGCTGTAGACTGGTATGCTGGTGTACATCATGT ATCCACTATATATATACGACGTGCTGTTCGTTGCATGGACTCAGGACGAG ACTCAGGACGCTGTGCGTCGTAGTGTAGTTGTTTACGGTCGACGCCGGAA GGAGGAGTGTATCGAGACAACCTCAGGAGTTAGTGGCAGCAGCAGCAGCA GCAGCAGCGGTACAGCATTGGTACAGCAGTTACTTCAGCAGCGACACACA ACACCACCGCCGACAACAACGCAACAACAATAACAACAACCAAACAATTC AAACATGATTTGCAGAGAGAGTAAACAAACGGGTTGCCACCTCTCCACTA GGCTGTAGCTTTACTGCTTTGTGTTGTTAGTGTGGTTCACCATTAATTAT TCCCACACTCCACCACACCCATGCGGGATGGGAGTACGAGTCTCGACTAC AACGGGCGTTGCCCCCCCCCCCCGAAAACTCTGACAAGTTGTTATTGCCG TAATCGTGCACGAAAACTCTGTTAAGTTGTTGCCGAAATCGTGCGAGTCC ACATTGCATCCTGCCAAATGATACAATATATATGCACCACTCACTCTGCT GTAGCTCTTTTGTAGCTCATTGGTCCACAATGAAGAAGGAAGAGGACTTC GCGATTCAGGCCGCTATATTTAGTTCTACAGATACATTGTATGTATGTAT GTGTAGTCTGTCCACAACCAACCTCCGGTTTCGTCCTTGAGTGGTGCGCG CACGATAAACAAAGCCATGCACCATTATGAGGAGGGGTGAGGTCGCTCGT ACGACAAATATGCACGGCATAGACTAGTCGAATATGTAGTTCAAATTTCA GCCCTCAAGTTATTATGTCTTTCTGTGGACGGTGGGTGGGCAAAAGAAGG ACGCACTGGCTATTGAACTCGGAACTGCTGATGACGTGGCGGACGTAGCG AACCCGTGTAATGACGCACAGAGGATTGTGAAGAAAAGTGAATCGCCCCG CAGCCAGCCGGTCGGGTTCCGGTTACCCCAAGAAGACTGAAGTATCGAAA AAGGGGGGGGGGGTAATGTGGAGACCACCTTCATAAAGGTACAATCTCCC CGACGTCTGTCGAGGACGATTCCCTCTTTTCACATTCCCTCCTGATCAAT TCCAAATGAATACACGCACGTGCTCTTCACGCAGGACTCCGATTTCTGCA CCACGTTCACGATTGAAGGGCGACAAGATCGTGGCCTTCATGCAGAGTTG GGTGGACACGTACGGGCAGAACATGCCCAACAACGGCAACATTTTCCTCT ACGCGGCAAACAAAGAGGTACCCAACGATTACTCACTCGTATTCTTCGAG TGGTACATCATGTGTGCGTACATTCTGCACTTCCAAGCGGGCTAAAGTGA AATTACGTACATACATGTATTGTTGTAGTTAAAGACCTTGCTAGCTACTT GAAGACCTCGTTTCACGAAAGTTATTTATTTGTTTTGAATACACCGTTAC ATTTAGCCTTCGCCTCGTACTACAAGGGTGCTTTCTGAACTGGACCCTGT GTGTCTCTTAATTATGTTAACCCCGCCCTCAACAACAAAGGAAATATACG GCTACTACTGCGACGAGCAGCGCCGGTTACACAAGGATGATCCTTCCAGC TTGCGTGAGGCTCTCGTCAGTCCCACCTACTTTAACAAGGTCTGGGCAGC TCACCTACCTAAAGTCAAGATAAAGGTTCGGGGCGACTTCATGTTGTGTG AGACGTGCACTAGGCTGAAAGGATTGCTTCATGGTGAACCTGGACAGCGC CCAGTTCAAGACAAAGCTGCACGGCAACGCTATCAGTCGGAGTACGACCA ACACATCAAGGTTTGTTTGTTTGTGGTGTTATTTGTGGCGGAAACCCGCC ACGATGTCAAATGAGATCCTGTGGCAGATGCTAGCTGGAGCTTCGCCTGC GCGGGTATCATGTTTTTATCGTCATACATACATACATACATACACACATA CACATATACAACCATAATAGACTATATGATACAGACCGCATTCACTATGT TGCCTGTATAGAATGCAACCAAACGTGCCACGCGTGATTTAGATCGCACC CTCATGTGGCATACACCCTCTGCCGCCCGTCATGGTGACTTTTCACAAGA CAAGCAATGTATGTGTGAAGGCATTATTGAATATACTTCGAAGTATATAA TAGTCTAGTACGTGTGTTTGTTATTTTGGCAGGAGATCACCGCTGACCGT GAGGTTATTGCGAGAATGGAGAGACGCGCGCAGACAGCAAAAGCTGACGG CAGACCCGCTCAGTTTACGTACAACAGCATGGATGCCGCCGCTCAGGTCA AGTTTTCTGTCCCTGCCTTGTCCGTCATGACCCATGGGACCGACAGGTGA GTGAAAAGAACTGGGCCGCTGCGCGACGTATACGTTGTAGCAGCGTTCGT TCCGCACCAACGAGAAGAAGGCGTAAAATAGTTTGAGACGTCGGGGCGAG AAATGGACGAACAAAGAGCCCGTCGGTCAGCACTCTTCAGTCGGCGGGCT CGACCACGGAAAATATTGGTCCGGCTTTCTTTGTCGTTCACCGCCTTTTT TGATTGAGCGGCATACACATTTCCAAACTCCTCCTTAGTCACGGCTAACC TATTGCGCCATATGGGCACCCCTCGTGCGCGCTGTTTCTGTCGTTTGTAC AGAGGCTGGCCCGAGAGACAAAAAATTTACGCTGTCCTGACGGAGGGGCA CTCTGTTAGTGTGTCGTTCGTTCCTCAGATCCTGGGCACAGGTGGGCTGG ATAGACGGTATCTTCCTCGCATTTTCCTCTTGTCGATGTGCTACTTCGCG CTGCTATGTCGATGTAACTACATACATGGTCTCACTTCTTTCCCCGGCAG TCCACAAAAACGAAGCATTTATTTCCTGCGCTAACGAATCGGCATGTATG TATGTTGACCATGGAAACAATCAATTAACACGTTGTCCGAAACATATTCT CCCACATTGCGTGCTTCATGAAGGGAGCAACCTAGTGTGCACGGCGTTGT ACCTGCAACTCATGAAGCTCGTCGAGGACTACGGCGAAACCCTTGAGGAC GTTGTCTTTCAGGTGGACAACACGGTGGCGGAGAATAAAAACAACTACTT GCTAGGGTGCTTGGGGCTGCTGGTCGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11250:931..4257-

>mRNA_Ecto-sp13_S_contig11250.1114.1 ID=mRNA_Ecto-sp13_S_contig11250.1114.1|Name=mRNA_Ecto-sp13_S_contig11250.1114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11250:931..4257- (Ectocarpus species13 EcNAP12_S_4_19m)
AAAGGCACGCCAGGAGCGCGGGCGTCAAGCACCGTGGACAGGACTCCGAT
TTCTGCACCACGTTCACGATTGAAGGGCGACAAGATCGTGGCCTTCATGC
AGAGTTGGGTGGACACGTACGGGCAGAACATGCCCAACAACGGCAACATT
TTCCTCTACGCGGCAAACAAAGAGGAAATATACGGCTACTACTGCGACGA
GCAGCGCCGGTTACACAAGGATGATCCTTCCAGCTTGCGTGAGGCTCTCG
TCAGTCCCACCTACTTTAACAAGGTCTGGGCAGCTCACCTACCTAAAGTC
AAGATAAAGGTTCGGGGCGACTTCATGTTGTGTGAGACGTGCACTAGGCT
GAAAGGATTGCTTCATGGTGAACCTGGACAGCGCCCAGTTCAAGACAAAG
CTGCACGGCAACGCTATCAGTCGGAGTACGACCAACACATCAAGGAGATC
ACCGCTGACCGTGAGGTTATTGCGAGAATGGAGAGACGCGCGCAGACAGC
AAAAGCTGACGGCAGACCCGCTCAGTTTACGTACAACAGCATGGATGCCG
CCGCTCAGGTCAAGTTTTCTGTCCCTGCCTTGTCCGTCATGACCCATGGG
ACCGACAGAGGCTGGCCCGAGAGACAAAAAATTTACGCTGTCCTGACGGA
GGGGCACTCTGTTAGTGTGTCGTTCGTTCCTCAGATCCTGGGCACAGGGA
GCAACCTAGTGTGCACGGCGTTGTACCTGCAACTCATGAAGCTCGTCGAG
GACTACGGCGAAACCCTTGAGGACGTTGTCTTTCAGGTGGACAACACGGT
GGCGGAGAATAAAAACAACTACTTGCTAGGGTGCTTGGGGCTGCTGGTC
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