mRNA_Ecto-sp13_S_contig11250.1114.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE) HSP 1 Score: 256 bits (653), Expect = 5.040e-76 Identity = 134/284 (47.18%), Postives = 182/284 (64.08%), Query Frame = 1
Query: 1 KGTPGARASSTVDRTPISAPRSRLKGDKIVAFMQSWVDTYGQNMPNNGNIFLYAANKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTD-RGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGETLEDVVFQVDNTVAENKNNYLLGCLGLLV 849
K TP A+ASS+V R I++ R R K + +VAF+ D YGQ MPN+ +LY +K E+Y Y R L+ DP+SL E L S YFN+VW+AH +K+K GDFMLCE CT LK +HG+ G R V D+A R+R+QS Y +H++++ DR AR+E +A AK++G P + Y +DAA Q F+ P + HG D RG+ ERQKIY L G + V +PQILGTGSN+VCT L+ M+L + +L DV Q+DNTV+ENKNN+++G L LV
Sbjct: 226 KKTPKAQASSSVHRASIASTRDRPKLEGVVAFLHRHEDMYGQKMPNSDQSYLYLKSKLELYEEYSKNTRELYGQDPASLAERLCSKNYFNQVWSAHFGNLKLKPNGDFMLCEICTLLKEKIHGQAGSRGVLDEAERERHQSVYKEHLQDVERDRMYGARLENQAAVAKSNGTPWETVYLQVDAANQSNFATPIGASQAHGVDDRGYAERQKIYGALVSGIMMQVFMIPQILGTGSNMVCTTLFTLFMELTLQWKHSLGDVFIQMDNTVSENKNNFIMGFLAALV 509
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: A0A6H5KL03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL03_9PHAE) HSP 1 Score: 185 bits (470), Expect = 4.760e-50 Identity = 100/228 (43.86%), Postives = 142/228 (62.28%), Query Frame = 1
Query: 172 EEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHG-EPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTD-RGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGETLEDVVFQVDNTVAENKNNYLLGCLGLLV 849
+E++ Y + R+ + L AL + YF K+WA P +K+K GDFMLC+ CT LK + G + G R +QD+A + + EY+ H+++++ DR+ IA+++ A+ AK +G P + Y MD A F+VP HG D +G+ ER K+Y VL G ++V F PQILGTG+NLV TALY Q M+L +G TL DV QVDNTV+ENKNNYL+G L +V
Sbjct: 12 QELFDEYESQTRKELHGELVGLDAALCTRQYFKKIWAEEFPHLKVKPSGDFMLCKICTLLKSAIFGTQSGSRGIQDEAEKNLKRKEYEDHMEDVSNDRKAIAKLKTAAENAKMNGVPWEQPYCMMDGANSNNFTVPLSKDKAHGIDDKGYGERAKVYGVLVAGVVMNVFFAPQILGTGTNLVATALYYQFMELTLSWGHTLGDVTVQVDNTVSENKNNYLMGILAAMV 239
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE) HSP 1 Score: 174 bits (440), Expect = 9.480e-46 Identity = 97/248 (39.11%), Postives = 143/248 (57.66%), Query Frame = 1
Query: 130 MPNNGNIFLYAANKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGET--------LEDVVFQVDNTVAENKNNYLLGCLGLLV 849
MP+ ++ + ++NKEE+Y + E +R++ +D S VS +F ++ P ++++V G+FM C+ C LK HG PG +P D +A + H + + ADR VIA A AKADG+P F + S+DAA ++PA+ THG DRG+ ERQKI AV EG V V F PQ LG G NL CTA +L + ++++ Y ++ ++ +QVDN V+ENKNN+ LG GLLV
Sbjct: 1 MPHKDHVVICSSNKEELYQDFLTEAKRVYPEDTSKR----VSKAHFFRIPRKDRPHIRVRVGGEFMKCDICVTLKERRHGSPGVKPSLDSSALASIDRDLAAHRQMVQADRLVIANRTGDAMRAKADGKPLNFVFMSIDAANSTSHALPAIYPPTHGGDRGYSERQKIMAVHIEGQFVEVYFTPQYLGGGCNLACTAAHLAITRIIDKYHDSPPHPSGCIIQHAHWQVDNCVSENKNNFFLGYAGLLV 244
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: D8LJG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG9_ECTSI) HSP 1 Score: 145 bits (367), Expect = 4.350e-41 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1
Query: 478 MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTG 699
MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTG
Sbjct: 1 MERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTG 74
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: A0A6H5L233_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L233_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 3.750e-7 Identity = 29/51 (56.86%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 697 GSNLVCTALYLQLMKLVEDYGETLEDVVFQVDNTVAENKNNYLLGCLGLLV 849
G+NLV TAL+ Q M+L +G TL DV VDNTVAEN NNY +G L +V
Sbjct: 6 GTNLVATALHYQFMELTLSWGHTLVDVTVHVDNTVAENMNNYFMGILAAMV 56
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI000A2A9391 (uncharacterized protein LOC110242855 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9391) HSP 1 Score: 57.8 bits (138), Expect = 9.830e-6 Identity = 67/284 (23.59%), Postives = 112/284 (39.44%), Query Frame = 1
Query: 73 KGDKIVAFMQSWVDTYGQNMPNNGNIFLYAA-NKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDR---GWPERQKIYAVLTEGHSVSVSFVPQILGTG--------------------SNLVCTALYLQLMKLVEDYGETLEDVVF-QVDNTVAENKNNYLLGCLGLLV 849
K +A++Q + +T G + P++ I L + +K IY DE + + VS ++F +W H V I F C CTR K L P QR +K E + H+ + +R V +A+ KF ++++ G D+ P+ ++I L+ +V+ V I+ +G SNL T L LM+ ++Y L +++ Q+DN ENKN ++L L L+V
Sbjct: 310 KTGDCIAWLQYFFNTIGDHQPDSNAIHLPSCFSKIAIYKKMLDENTQFN--------HPTVSLSHFYNIWXQHFRNVTIPKENRFTKCTECTRFKNLKEQHPSQRDSINK--------ELNDHLDLVWQERRVYYMHRYKAR----------------------KFPQKYMTIIDDGMDQKTTNIPKVRRISKALSSLTNVNTHLVGAIVHSGQATHGKEIYGSFDFYQWPHDSNLNMTVLLSTLMEWCKNY--KLPPILYLQMDNCWRENKNQFMLALLALMV 553
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI0009E2E69B (uncharacterized protein LOC110062891 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2E69B) HSP 1 Score: 57.4 bits (137), Expect = 1.240e-5 Identity = 70/265 (26.42%), Postives = 108/265 (40.75%), Query Frame = 1
Query: 88 VAFMQSWVDTYGQNMPNNGNIFLYAA-NKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGT-DRGWPERQKIYAVLTEGHSVSVSFVPQILGT--------GSNLVCTALYLQLMKLVEDYGETLEDVVF-QVDNTVAENKNNYLLGCLGLLV 849
+A++Q ++ GQ P+N I L + + IY C+E + S + + F ++ H P V I F C CTR K E ++ V DK ARQ +H+ + +R V KA P+++ DA Q +P + T T + + A+ G S + +LG+ NL + L L++ E Y L V++ Q+DN V ENKN Y+L L LLV
Sbjct: 146 IAWLQFFISCVGQYQPDNKTIHLPSCFTRLSIYRRLCEENK--------SFNTPSIGLSQFYSIFHDHFPHVVIPKENRFTKCTDCTRYK-----EAKEKTV-DKKARQEIDRLLTEHMDLVWRERRVYY-----LHRYKARKHPSKYLTIIDDAMDQKTTCIPRVRRKTKATCNLATVGTHLVGAIFHSGQSPNGK---DVLGSFDYYQWPHDPNLSASVLLAMLVRWCEKY--LLPPVLYLQLDNCVKENKNQYILWLLALLV 386
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI001CF352F5 (uncharacterized protein LOC114967703 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF352F5) HSP 1 Score: 56.6 bits (135), Expect = 2.080e-5 Identity = 67/253 (26.48%), Postives = 99/253 (39.13%), Query Frame = 1
Query: 94 FMQSWVDTYGQNMPNNGNIFLYA-ANKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGETLEDVVFQVDNTVAENKNNYLLGCLGLLV 849
+M+++ G MP+ G + L + +K +YGY K D E ++ + F ++ P VKI F C+ CT L GE +R AR R +Y + E D ++ R KA P F + D Q K +P L V H R + VL G F +NL L +L + +D +TL Q+DN ENKN ++L L +LV
Sbjct: 5 WMEAFFTRVGDKMPDTGALHLPSFLDKSIMYGYM--------KADMEDDSEDIIHYSTFCQLLRDLFPHVKIPKVNRFTRCDYCTIL-----GEEKRR------ARDRDVRKYLDQLFEFHNDLQMKERKVYYHHREKAKKYPHDFACIAQDGMDQAKLLLPRLVVTAHAYASARKLRTHLTGVLNHGRQPKGYFDLFQFPHDANLTINILLFELESMGDDLPDTL---YLQMDNCWRENKNQFVLNFLAILV 235
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI001CF5A32F (uncharacterized protein LOC114951988 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5A32F) HSP 1 Score: 55.5 bits (132), Expect = 5.520e-5 Identity = 69/270 (25.56%), Postives = 111/270 (41.11%), Query Frame = 1
Query: 73 KGDKIVAFMQSWVDTYGQNMPNNGNIFLYAA-NKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGT-DRGWPERQKIYAVLTEGHSVSVSFVPQILGT--------GSNLVCTALYLQLMKLVEDYGETLEDVVF-QVDNTVAENKNNYLLGCLGLLV 849
+ + +A+++ +V GQ P+N I L + + IY C+E + S + + F ++ + P V I F C CTR K E ++ V DK ARQ +H++ + +R + KA P+++ DA Q +P + T T + + A+ G S + ILG+ NL + L L++ E Y L V++ Q+DN V ENKN Y+L L LLV
Sbjct: 253 RSTECIAWLEFFVSCVGQYQPDNKAIHLPSCFTRLSIYQRLCEENK--------SFNTPSIGMSQFYSIFHDNFPHVFIPKENRFTKCTDCTRYK-----EEKEKTV-DKKARQEIDRLLTEHMELVWRERRIYY-----LHRYKARKHPSKYLTIIDDAMDQKTTCIPRVRRKTKATCNLATVGTHLVGAIFHSGQSPNGK---DILGSFDYYQWPHDPNLTASVLLCMLVRWCEKY--QLPPVLYLQLDNCVKENKNQYILWLLALLV 498
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Match: UPI0010696183 (uncharacterized protein LOC114541410 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI0010696183) HSP 1 Score: 55.1 bits (131), Expect = 6.610e-5 Identity = 64/252 (25.40%), Postives = 98/252 (38.89%), Query Frame = 1
Query: 97 MQSWVDTYGQNMPNNGNIFLYAANKEEIYGYYCDEQRRLHKDDPSSLREALVSPTYFNKVWAAHLPKVKIKVRGDFMLCETCTRLKGLLHGEPGQRPVQDKAARQRYQSEYDQHIKEITADREVIARMERRAQTAKADGRPAQFTYNSMDAAAQVKFSVPALSVMTHGTDRGWPERQKIYAVLTEGHSVSVSFVPQILGTGSNLVCTALYLQLMKLVEDYGETLEDVVF-QVDNTVAENKNNYLLGCLGLLV 849
M++ G MP++ I L I Y E + DDP + + F K+ +V I C+ C LK E Q+ + DK R Y Y+QH + +RE + AKA P ++ +D Q+K +P L W + + VL GH F SNL L L+++ + + D ++ Q+DN ENKN Y++ LG+LV
Sbjct: 1 MKTSFSKMGDKMPDSIRIHLPCYLNYRILYNYMVEDLKAMGDDP-------ICYSQFCKLLETDFKEVTIPKVTRLTKCDICVILK-----EEKQKTL-DKTERNYYDVLYNQHNQLQREEREKYYK-----HRAKAKSDPKKYACIIIDGMDQMKLMIPQLLHQMKAYSSAWKLKTHLTGVLNHGHEAIGYFDLHQWAHDSNLTINVLLRVLLRM-----DKIPDRLYLQMDNCWRENKNQYVITFLGVLV 229 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11250.1114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11250.1114.1 >prot_Ecto-sp13_S_contig11250.1114.1 ID=prot_Ecto-sp13_S_contig11250.1114.1|Name=mRNA_Ecto-sp13_S_contig11250.1114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp KGTPGARASSTVDRTPISAPRSRLKGDKIVAFMQSWVDTYGQNMPNNGNIback to top mRNA from alignment at Ecto-sp13_S_contig11250:931..4257- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11250.1114.1 ID=mRNA_Ecto-sp13_S_contig11250.1114.1|Name=mRNA_Ecto-sp13_S_contig11250.1114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3327bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11250:931..4257- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11250:931..4257- >mRNA_Ecto-sp13_S_contig11250.1114.1 ID=mRNA_Ecto-sp13_S_contig11250.1114.1|Name=mRNA_Ecto-sp13_S_contig11250.1114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11250:931..4257- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |