mRNA_Ecto-sp13_S_contig1125.1113.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: D8LN76_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN76_ECTSI) HSP 1 Score: 484 bits (1245), Expect = 2.210e-169 Identity = 238/264 (90.15%), Postives = 249/264 (94.32%), Query Frame = 1
Query: 508 MVNYQGETVVVKTLQHVKELRREKAHLSMHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIYGLPHGRSLGRVVSLALDVARGLQASDRERYYRNLGALHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRVTGEYCPANAARPARIVPWRAPENVAGKPLSEKVDIYAMGMIFFSLISGGVPFPDQEAFEMAYKAKLRPEIDPSWHKGFTRLFQDMWHEDPERRPSARQVVLRLEDLLRELLIASYP 1299
MVNYQGE VVVKTLQHV+ELRREKAHLSMHRREVLTLDALRG+PHIVGMLGFCQTTVVTEYHS+NFLSTI+GLPHGRSLGRVVSLALDVA+GLQA LHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRVTGEYCPANAA+PARIVPWRAPENVAGKPLSEKVDIYAMGMI+FSLISGGVPFPDQEAFE AY+AKLRPEIDPSWHKGFTR+FQDMWH+DPERRPSARQVVLRLEDL RELL+ASYP
Sbjct: 1 MVNYQGENVVVKTLQHVEELRREKAHLSMHRREVLTLDALRGQPHIVGMLGFCQTTVVTEYHSDNFLSTIFGLPHGRSLGRVVSLALDVAQGLQA------------LHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRVTGEYCPANAAKPARIVPWRAPENVAGKPLSEKVDIYAMGMIYFSLISGGVPFPDQEAFERAYEAKLRPEIDPSWHKGFTRIFQDMWHQDPERRPSARQVVLRLEDLQRELLVASYP 252
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: D7FNX1_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX1_ECTSI) HSP 1 Score: 481 bits (1237), Expect = 2.240e-166 Identity = 246/379 (64.91%), Postives = 286/379 (75.46%), Query Frame = 1
Query: 163 MITIFLLATTASAGAGLAETASSLDENTSNKDWRTRR---GSEPTAHDGFNSTSTPEEEGRRKLYHIDVNNAGEPCDRNPLWERMVNPANYKFGCQEIEEMLSGDMTLIGTGRIRTVYMVNYQGETVVVKTLQHVKELRREKAHLSMHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIYGLPHGRSLGRVVSLALDVARGLQASDRERYYRNLGALHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDR-VTGEYCPANAARPARIVPWRAPENVAGKPLSEKVDIYAMGMIFFSLISGGVPFPDQEAFEMAYKAKLRPEIDPSWHKGFTRLFQDMWHEDPERRPSARQVVLRLEDLLRELLI 1287
MI + L+A SAG ++ S D+ S KD RR G+ TA G ++ +T + GRRKLYH+ V+ AGEPCDRNPLWE+ NPANYKFGCQEIE MLSG+MTLIGTGR+RTV+MV Y+GE VVVKTLQHV+ELRR KAHL MHR E LTL+ALRG P++VGMLGFC TTVVTEYH +NFL TI+ SL RVVSLALDVA+G+QA LHE AGAIHLDMKPQQLLID GRGKVNDFNS HLMS D G++CP RPAR+VPWRAPEN+AGKP++EKVDIYAMGMI++SL+SGG+PFPD E F+ A A RPEIDPSWHKGF + QDMWHEDP+ RP ARQVV RL+ L ELL+
Sbjct: 1 MINLLLVAANVSAGEETMDSVSPFDDPASKKDLELRRIPEGTATTARIGLHANTTLAQ-GRRKLYHLHVSEAGEPCDRNPLWEKQPNPANYKFGCQEIERMLSGEMTLIGTGRVRTVHMVEYEGEAVVVKTLQHVEELRRLKAHLEMHRVESLTLEALRGHPNVVGMLGFCNTTVVTEYHPDNFLHTIFRKKEKLSLRRVVSLALDVAQGMQA------------LHEIAGAIHLDMKPQQLLIDDAGRGKVNDFNSVHLMSADASADGKHCPILTGRPARLVPWRAPENIAGKPVTEKVDIYAMGMIYYSLVSGGLPFPDVETFDEARAAHERPEIDPSWHKGFVEIIQDMWHEDPDERPFARQVVQRLQALQDELLV 366
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: A0A6H5JMU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMU0_9PHAE) HSP 1 Score: 447 bits (1149), Expect = 3.550e-154 Identity = 232/276 (84.06%), Postives = 243/276 (88.04%), Query Frame = 1
Query: 1 LQWVDAAGRTRLRLLEDTMTGPSSAPVA-FPRRNPKPAYVDDRRIRRG--VLPAVNLMITIFLLATTASAGAGLAETASSLDENTSNKDWRTRRGSEPTAHDGFNSTSTPEEEGRRKLYHIDVNNAGEPCDRNPLWERMVNPANYKFGCQEIEEMLSGDMTLIGTGRIRTVYMVNYQGETVVVKTLQHVKELRREKAHLSMHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIYGLPHGRSLGRVVSLALDVARGLQASDRERYYRN 819
L+WVDA GRTRLRLLE TM GPSSA A FPRR PKPA VDDRRIRR LP VN MIT+FL+ TTASAGAGLA+T SSLDE TSNKD RTRR SEPTAHD FN+TSTPEEEGRRKLY ID NNAGE CDRNPLWERMVNPANYKFGC+EIEEM SGDM IGTGRIRTVYMVNYQGETVVVKTLQHV+ELRREKAHLSMHRREVLTLDALRG+PHIVGMLGFCQTTVVTEYHS+NFLSTI+G PHGRSL RVVSLALDVARGLQAS +RN
Sbjct: 14 LRWVDADGRTRLRLLEHTMIGPSSATTAAFPRRQPKPANVDDRRIRRRFFALPTVNAMITLFLVVTTASAGAGLADTVSSLDETTSNKDRRTRRTSEPTAHDEFNTTSTPEEEGRRKLYRIDANNAGESCDRNPLWERMVNPANYKFGCKEIEEMFSGDMAFIGTGRIRTVYMVNYQGETVVVKTLQHVEELRREKAHLSMHRREVLTLDALRGQPHIVGMLGFCQTTVVTEYHSDNFLSTIFGPPHGRSLSRVVSLALDVARGLQASIARDRWRN 289
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: A0A6H5JU33_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU33_9PHAE) HSP 1 Score: 375 bits (964), Expect = 6.510e-126 Identity = 196/299 (65.55%), Postives = 225/299 (75.25%), Query Frame = 1
Query: 445 IEEMLSGDMTLIGTGRIRTVYMVNYQGETVVVKTLQHVKELRREKAHLSMHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIYGLPHGRSLGRVVSLALDVARGLQASDRERYYR-NLG-ALHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRV-TGEYCPANAARPARIVPWRAPENVAGK-----------------PLSEKVDIYAMGMIFFSLISGGVPFPDQEAFEMAYKAKLRPEIDPSWHKGFTRLFQDMWHEDPERRPSARQVVLRLEDLLREL 1281
++ MLSG+MTLIGTGR+RTV+MV Y+GE VVVKTLQHV+ELRR KAHL MHR E LTL+ALRG P++VGM+GFC TTVVTEYH NFL I+ SL RVVSLALDVA+G+QA E+ YR + G ALHE AGAIHLDMKPQQLLID GRGKVNDFNS LMS D G++CP RPAR+VPW+APEN+AGK P++EKVDIYAMGMI++SLISGG+PFPD E F+ A A RPEIDPSWHKGF + QDMWHEDPE RP ARQVV RL+ L EL
Sbjct: 4 VQRMLSGEMTLIGTGRVRTVHMVEYEGEAVVVKTLQHVEELRRLKAHLEMHRVESLTLEALRGHPNVVGMVGFCNTTVVTEYHPYNFLHAIFRKTEELSLRRVVSLALDVAQGMQARYGEKGYRKSFGHALHEIAGAIHLDMKPQQLLIDNAGRGKVNDFNSVQLMSADHSGDGKHCPILTGRPARLVPWKAPENIAGKVFNSGNPLGSTVSTFARPVTEKVDIYAMGMIYYSLISGGLPFPDVETFDEARAAHDRPEIDPSWHKGFVEIIQDMWHEDPEERPFARQVVQRLQALQDEL 302
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: A0A6H5LAH0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAH0_9PHAE) HSP 1 Score: 325 bits (834), Expect = 4.940e-105 Identity = 163/320 (50.94%), Postives = 220/320 (68.75%), Query Frame = 1
Query: 331 GRRKLYHIDVNNAGEPCDRNPLWERMVNPANYKFGCQEIEEMLSGDMTLIGTGRIRTVYMVNYQGETVVVKTLQHVKELRREKAHLSMHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIYGLPHGRSLGRVVSLALDVARGLQASDRERYYRNLGALHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRVTG---EYCPANAARPARIVPWRAPENVAGKPLSEKVDIYAMGMIFFSLISGGVPFPDQEAFEMAYKAKLRPEIDPSWHKGFTRLFQDMWHEDPERRPSARQVVLRLEDLLREL 1281
GRR+L ++V++ GE C RNPL ER+V+PA YK+GC+EI M+ + L+ +G +R VY+V Y+G+ +VVKTL++V ELR++K +L+MH+REVLT+DAL+G P+IV MLG C TTVVT++ +F +I + +VVSLAL A+GLQA LHE G IH DMKPQQLLID G VNDFN+ LM R G E+C + PA+++PWR PEN AGKPL+EK DIY+MGMIF+SLI+G P+ EA + A +PE+DPSWH+G+ + + MW +DPERRPSARQVV+RL + E+
Sbjct: 74 GRRELLGVNVDDMGEKCRRNPLHERIVDPAEYKYGCKEIHNMIRREHALLASGLVRDVYLVEYEGQALVVKTLRNVDELRKQKLYLTMHKREVLTMDALKGHPNIVDMLGVCGTTVVTKFFKEDFKGSIRRRGAPMPIRQVVSLALGAAKGLQA------------LHEIVGGIHFDMKPQQLLIDDDGTAVVNDFNALKLMG--RSPGPDEEFCAVHGGTPAQLIPWRPPENYAGKPLTEKADIYSMGMIFYSLIAGRNPYDTPEALKTAVSHGSKPEVDPSWHRGYMEVVERMWLDDPERRPSARQVVVRLTAIQEEV 379
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: D7FYC9_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYC9_ECTSI) HSP 1 Score: 313 bits (803), Expect = 1.570e-100 Identity = 159/317 (50.16%), Postives = 210/317 (66.25%), Query Frame = 1
Query: 337 RKLYHIDVNNAGEPCDRNPLWERMVNPANYKFGCQEIEEMLSGDMTLIGTGRIRTVYMVNYQGETVVVKTLQHVKELRREKAHLSMHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIYGLPHGRSLGRVVSLALDVARGLQASDRERYYRNLGALHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRVTGEYCPANAARPARIVPWRAPENVAGKPLSEKVDIYAMGMIFFSLISGGVPF--PDQEAFEMAYKAKLRPEIDPSWHKGFTRLFQDMWHEDPERRPSARQVVLRLEDLLREL 1281
R LYH DV G PC RNPL + V+PANY+FGC++I+ ML G TL+G+G +R V++V Y+G+TVVVK+L+ + EK L MH+ EVLTLDALRG +IVGMLG C TTVVTEY N + + S+ VVS++LD ARGLQA LHE G +H+D+KP QLL+D R VNDFNS H+M + G +CP A + R+ W +PEN AG+PL+E DIY+M M+F+SL+SG PF P+ A A + + RP +DPSWH+G+ ++ QDMW+EDP RRPSARQ+V RLE + +L
Sbjct: 72 RWLYHFDVTKEGVPCKRNPLLDLEVDPANYEFGCRDIKIMLEGKKTLVGSGSVRDVFLVEYEGQTVVVKSLRRKDDPNVEKHRLVMHKLEVLTLDALRGNRNIVGMLGVCGTTVVTEYFPTNVVYYAFQSRERLSIHAVVSMSLDAARGLQA------------LHEV-GCVHVDLKPMQLLVDDNRRVMVNDFNSVHVMGISPTDGAFCPVRAKKRNRLEAWPSPENYAGQPLTETSDIYSMAMVFYSLLSGTPPFGGPEGLAEAFATRTQPRPLVDPSWHRGYVQIVQDMWNEDPMRRPSARQIVARLEIIEEDL 375
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: A0A6H5K7R0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R0_9PHAE) HSP 1 Score: 312 bits (800), Expect = 3.570e-99 Identity = 168/365 (46.03%), Postives = 227/365 (62.19%), Query Frame = 1
Query: 334 RRKLYHIDVNNAGEPCDRNPLWERMVNPANYKFGCQEIE----------------------------------------------EMLSGDMTLIGTGRIRTVYMVNYQGETVVVKTLQHVKELRREKAHLSMHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIY-GLPHGRSLGRVVSLALDVARGLQASDRERYYRNLGALHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRV-TGEYCPANAARPARIVPWRAPENVAGKPLSEKVDIYAMGMIFFSLISGGVPFP-DQEAFEMAYKAKLRPEIDPSWHKGFTRLFQDMWHEDPERRPSARQVVLRLEDLLREL 1281
RRKLYH+DV AGEPC +PLW+R+V+PANY +GC EI+ ML+G+ TL+G GR+R VY+V Y+G V +KTL+++ + R +K HL H+RE+LTLDA+RG +IVGMLGFC T VVTEY++ +FL I+ G L VVS+ALD ARGLQA LHE A +IH+D+KPQQLL+D GR +NDFNSA LMSV + G CPA +A+ PW +PEN AG+PL+ DIY++ MIF+SL++G +P+ + E A ++ RPEIDPSWHKGF ++ QDMW++ P+RRPSA +VV+RL+ + E+
Sbjct: 79 RRKLYHVDVTEAGEPCTPSPLWDRVVDPANYDYGCNEIQARLNTARVPCLFPCSSTVATLLHCFLNGYGCLYYLRWRYPFCTIAQRMLAGNKTLVGNGRVRDVYLVEYEGRKVALKTLRNMDDGRSKKVHLMKHKREILTLDAMRGHRNIVGMLGFCDTMVVTEYYTTSFLRAIFRGRIELPDLA-VVSMALDAARGLQA------------LHEIASSIHVDLKPQQLLMDDDGRVMLNDFNSALLMSVSQAGDGTACPAQSAKRNLPTPWPSPENYAGEPLTPANDIYSLAMIFYSLMAGSLPYEGNPERLARAMSSQGRPEIDPSWHKGFMKVVQDMWNQTPQRRPSAERVVVRLQLVQAEI 430
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: D7G7W7_ECTSI (Similar to TAK1 (TGF-beta-activated kinase) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W7_ECTSI) HSP 1 Score: 282 bits (722), Expect = 1.850e-89 Identity = 147/295 (49.83%), Postives = 200/295 (67.80%), Query Frame = 1
Query: 418 ANYKFGCQEIEEMLSGDMTLIGTGRIRTVYMVNYQGETVVVKTLQHVKELRREKAHLSMHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIY-GLPHGRSLGRVVSLALDVARGLQASDRERYYRNLGALHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRV-TGEYCPANAARPARIVPWRAPENVAGKPLSEKVDIYAMGMIFFSLISGGVPFP-DQEAFEMAYKAKLRPEIDPSWHKGFTRLFQDMWHEDPERRPSARQVVLRLEDLLRELLIAS 1293
A Y F C + ML+G+ TL+G GR+R VY+V Y+G V +KTL+++ + R ++ HL H+RE+LTLDA+RG +IVGMLG C T VVTEY++ +FL I+ G L VVS+ALD ARGLQA LHETAG+IH+D+KPQQLLID GR +NDFNSAH+MS+ + G CPA + + PW +PEN AG+PL+ DIY++ MIFFSL++ +P+ + E A + RPEIDPSWHKGF ++ QDMWH+ P++RPSA++VV+RL+ L E+ S
Sbjct: 12 ARYPF-CTIAQNMLAGNTTLVGNGRVRDVYLVEYEGRKVALKTLRNMDDSRSQRVHLEKHKREILTLDAMRGHRNIVGMLGLCDTMVVTEYYTTSFLRAIFRGRMELPDLA-VVSMALDAARGLQA------------LHETAGSIHVDLKPQQLLIDDDGRVMLNDFNSAHIMSISQAGDGTACPAQSTKRNLPTPWPSPENYAGEPLTPASDIYSLAMIFFSLMAASLPYEGNPELLARAMSRQGRPEIDPSWHKGFMKVVQDMWHQTPQKRPSAKRVVVRLQLLQAEIYSES 292
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: D8LN73_ECTSI (Serine/threonine/tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN73_ECTSI) HSP 1 Score: 271 bits (693), Expect = 2.080e-85 Identity = 137/277 (49.46%), Postives = 185/277 (66.79%), Query Frame = 1
Query: 454 MLSGDMTLIGTGRIRTVYMVNYQGETVVVKTLQHVKELRREKAHLSMHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIYGLPHGRSLGRVVSLALDVARGLQASDRERYYRNLGALHETAGAIHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRVTGE-YCPANAARPARIVPWRAPENVAGKPLSEKVDIYAMGMIFFSLISGGVPFPDQEAFEMAYKAKLRPEIDPSWHKGFTRLFQDMWHEDPERRPSARQVVLRLEDLLREL 1281
M+ + TL+ +G +R VY+V Y+G+ +VVKTL++V ELR++K +L+MH+REVLT+DAL+G P+IV MLG C TTVVT++ +F +I + +VVSLAL A+GLQA LHE G IH DMKPQQLLID G +NDFN+ LM E +C + PA+++ WR PEN AGKPL+EK DIY+MGMIF+S+I+G P+ EA + A +PE+DPSWH+GF + + MW +DPERRPSARQVV RL + E+
Sbjct: 1 MIRREQTLLASGLVRDVYLVEYEGQALVVKTLRNVDELRKQKLYLTMHKREVLTMDALKGHPNIVEMLGVCGTTVVTKFFKEDFKGSIRRRGAPMPIRQVVSLALGAAKGLQA------------LHEIVGGIHFDMKPQQLLIDDDGTAVINDFNALKLMGRSPGPDEAFCAVHGGTPAQLITWRPPENYAGKPLTEKADIYSMGMIFYSVIAGRNPYDTPEALQTAVSHGSKPEVDPSWHRGFMEVVEQMWLDDPERRPSARQVVTRLTAIQEEV 265
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Match: A0A6H5J7B7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7B7_9PHAE) HSP 1 Score: 238 bits (607), Expect = 1.480e-69 Identity = 134/313 (42.81%), Postives = 184/313 (58.79%), Query Frame = 1
Query: 373 EPCDRNPLWERMVNPANYKFGCQEIEEMLSGDMTLIGTGRIRTVYMVNYQGETVVVKTLQHVKELRREKAHLS-MHRREVLTLDALRGKPHIVGMLGFCQTTVVTEYHSNNFLSTIYGLPHGRS---LGRVVSLALDVARGLQASDRERYYRNLGALHETAGA--IHLDMKPQQLLIDGTGRGKVNDFNSAHLMSVDRVTGEYCPANAARPARIVPWRAPENVAGKPLSEKVDIYAMGMIFFSLISGGVPFPDQEAFEMAYKAKLRPEIDPSWHKGFTRLFQDMWHEDPERRPSARQVVLRLEDLLRELLIAS 1293
E C R+PLW+++V+ +NY+FGC EIEEM+ G TLIG G IR VY+V G +VVK L+ E R + + +HR E +DA+RG P++V MLG C + V+EY + L G + VVS+ALD ARGLQA LHE G IH DMKPQQL++D GR K+ND N D G CP ++ +R+ PWR+PEN+AG+ L+EK+DIY++ M+F+S+++ P+ + + P DPSWH GF + +DMW DP RPSAR+VV RLE LR+ L+
Sbjct: 219 EECLRSPLWDKVVDESNYEFGCDEIEEMMEGKKTLIGNGNIRDVYLVERGGRNLVVKYLREDFEQRATRTRVERIHRWEAAAIDAVRGHPNVVDMLGICGPSSVSEYFPVRLDDLV--LKAGAQPIPILTVVSMALDAARGLQA------------LHEAPGGTIIHFDMKPQQLMVDDQGRLKINDLNMCSFPDTD-ADGNTCPYESSA-SRVGPWRSPENIAGEKLNEKLDIYSLAMVFYSMLALHPPYLNVPNATGNIMEGIPPPTDPSWHPGFLDIVRDMWQRDPNARPSARRVVQRLE-FLRDHLVTQ 514 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1125.1113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1125.1113.1 >prot_Ecto-sp13_S_contig1125.1113.1 ID=prot_Ecto-sp13_S_contig1125.1113.1|Name=mRNA_Ecto-sp13_S_contig1125.1113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=434bp LQWVDAAGRTRLRLLEDTMTGPSSAPVAFPRRNPKPAYVDDRRIRRGVLPback to top mRNA from alignment at Ecto-sp13_S_contig1125:9173..15337- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1125.1113.1 ID=mRNA_Ecto-sp13_S_contig1125.1113.1|Name=mRNA_Ecto-sp13_S_contig1125.1113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1125:9173..15337- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1125:9173..15337- >mRNA_Ecto-sp13_S_contig1125.1113.1 ID=mRNA_Ecto-sp13_S_contig1125.1113.1|Name=mRNA_Ecto-sp13_S_contig1125.1113.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1302bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1125:9173..15337- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |