mRNA_Ecto-sp13_S_contig11246.1109.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A6H5K2I2_9PHAE (DUF305 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2I2_9PHAE) HSP 1 Score: 531 bits (1368), Expect = 1.380e-189 Identity = 265/310 (85.48%), Postives = 276/310 (89.03%), Query Frame = 1
Query: 16 RGETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVINGELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGDAPADTEIELYDPLEFDEFDEECGTFGSADYAPADAGTFDSELCPNQKFLCGDV-------------------------ATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDEEVAAVLRDVINTQNYQITFMRGFLTDNGAELVAEECENDDMDGGSDDVPGWAIGVMAVLGVLCLSLLAAVVLKMKGSNVQQASK 870
RGETYEF+QLEASNWYHPLGFAYYPDGAH GVDELEEGIGSGDAPVYVI+G LSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRI+IVDAEGD PAD EIELYDPLEFDEFDEECGTFGSADYAP D GTFDSELCPNQKFLCGDV ATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDEEVAA+LRD+INTQNYQITFMRGFLTDNGAELVAEECEN+D+DG +DVPGWAIGV+AVLGVLCLSLLAAVVLKMKGSNV +A+K
Sbjct: 3 RGETYEFSQLEASNWYHPLGFAYYPDGAHAGVDELEEGIGSGDAPVYVIDGALSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIYIVDAEGDTPADAEIELYDPLEFDEFDEECGTFGSADYAPVD-GTFDSELCPNQKFLCGDVDSSFDRCMHAIDCKMNYEMRIEKAVATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDEEVAAILRDIINTQNYQITFMRGFLTDNGAELVAEECENEDVDG-DNDVPGWAIGVIAVLGVLCLSLLAAVVLKMKGSNVHEAAK 310
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: D7FP23_ECTSI (DUF305 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP23_ECTSI) HSP 1 Score: 538 bits (1385), Expect = 1.930e-186 Identity = 266/310 (85.81%), Postives = 276/310 (89.03%), Query Frame = 1
Query: 16 RGETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVINGELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGDAPADTEIELYDPLEFDEFDEECGTFGSADYAPADAGTFDSELCPNQKFLCGDV-------------------------ATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDEEVAAVLRDVINTQNYQITFMRGFLTDNGAELVAEECENDDMDGGSDDVPGWAIGVMAVLGVLCLSLLAAVVLKMKGSNVQQASK 870
RGETYEF+QLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVI+G LSDLDTYEPQFFFPEETW+ETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGD PADTEIELY+PLEFDEFDEECGTFGSADYAPAD GTFDSELCPNQKFLCGDV ATSNTVAFMHQMIPHHENAVNMAR+LLKNPGDE LDEEVAA+LRD+INTQN+QITFMRGFLTDNGAELVAEECENDDMDG SDDVPGWAIGVMA LGVLCLSLLAAVV+KMKGSNV + K
Sbjct: 12 RGETYEFSQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVIDGGLSDLDTYEPQFFFPEETWMETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGDTPADTEIELYEPLEFDEFDEECGTFGSADYAPAD-GTFDSELCPNQKFLCGDVDSSFDRCMHAIDCKMNYEMRVEKEVATSNTVAFMHQMIPHHENAVNMARILLKNPGDEELDEEVAAILRDIINTQNFQITFMRGFLTDNGAELVAEECENDDMDGDSDDVPGWAIGVMAALGVLCLSLLAAVVVKMKGSNVHRRRK 320
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A0L0GD09_9EUKA (DUF305 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GD09_9EUKA) HSP 1 Score: 260 bits (665), Expect = 9.780e-82 Identity = 137/255 (53.73%), Postives = 168/255 (65.88%), Query Frame = 1
Query: 16 RGETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVINGELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGDAPADTEIE-LYDPLEFDEFDEECGTFGSADYAPADAGTFDSELCPNQKFLCGD------------------------VATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDE-EVAAVLRDVINTQNYQITFMRGFLTDNG 702
RGETY F Q + SNWYHPLGFAY+ DGAHEGVDELEEG+ GD PVY+IN ELS+LD YEP+F FP E W NYTVELT+ DP++T+ FYFCH+HN MS RI +VD EGD P + E++ LY FD CGT +A ++ A +G D E C FLCGD ++ V FMHQMIPHH NAVNMA++LLK ++ +D+ +V +LRDVINTQN QITFMRG+LT+ G
Sbjct: 55 RGETYTFVQKDISNWYHPLGFAYFADGAHEGVDELEEGLRGGDYPVYMINNELSELDIYEPEFTFPLEFWETNNYTVELTINDPNLTDFFYFCHVHNKMSARIVVVDNEGDQPTEAELQPLYAFTNQSGFDSMCGTTDAAQFS-AQSGGID-EYCDGSVFLCGDQDDKFVQCINAIDCKMNYEMTVENYGNNSIVTFMHQMIPHHVNAVNMAKILLKEILEDNVDDPDVEVMLRDVINTQNAQITFMRGYLTELG 307
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7R9SV77_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SV77_9CHLO) HSP 1 Score: 193 bits (490), Expect = 6.760e-56 Identity = 121/269 (44.98%), Postives = 149/269 (55.39%), Query Frame = 1
Query: 19 GETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVING--ELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDA-EGDAPADTEIELYDPLEFDEFDEECGTFGSADYAPADAGTFDSE-LCPNQKFLCG-------------------DVATSN-----TVAFMHQMIPHHENAVNMARVLLKNPG-DEGLDEEVAA--VLRDVINTQNYQITFMRGFLTD-NGAELVAEECE 729
GETY F Q + SNWYHPLGFAYYPDGAHE E+E G+G+ Y+ING LD YEP F W +Y + LT+ DP+ TEIFYFCHIHN MSGRI I +A E P ELY P D FD CGTF + ++ +SE CPN FLCG ++ +N V F+HQMIPHH NAVNMA++LLK DE D+E+ +L ++N QN QIT+MR +L D N A C+
Sbjct: 59 GETYTFIQNDVSNWYHPLGFAYYPDGAHEDQPEVENDDGTGNVLTYLINGIEPPLGLDDYEPAFAVARADWKMHSYEINLTINDPNTTEIFYFCHIHNKMSGRIRINNANEPYVPK----ELYAPYVPDSFDATCGTFETHNF------DLNSENYCPNSTFLCGAEDNQFSKCMQAIDCKMNYEMRVTNFEPNPIVTFIHQMIPHHVNAVNMAKILLKTTDMDETNDDELEMKEMLLSIVNGQNEQITYMRKWLNDHNYTTSEASRCD 317
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S0E333_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E333_9EUKA) HSP 1 Score: 173 bits (439), Expect = 2.250e-48 Identity = 112/280 (40.00%), Postives = 145/280 (51.79%), Query Frame = 1
Query: 19 GETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGELSD--------LDTYEPQFFFPEETWLETNYTVELTVTDPDVTE-----IFYFCHIHNGMSGRIHI--VDAEGDAPA--DTEIELYDPLEFDEFDEECGTFGSADYAPADAGTFDSELCPNQKFLCGDVAT----------------------------SNTVAFMHQMIPHHENAVNMARVLLKNPGD-----EGLDEEVAAVLRDVINTQNYQITFMRGFLTDN 699
G+TY F+Q + +NWYHP+GFAY PDGAH G DEL+E G G+ +Y ING + LD YEP+FF+P + W+ YT ELT+T I+YFCHIH+ MSG+I I VD P TE+ELY P+ D CGT G A Y T+ + + FLCGD+ T S V FM QMIPHH NAVNMA++LLK D +GL++ +L D++N QNYQ+ R +L N
Sbjct: 33 GQTYTFDQSDPTNWYHPVGFAYEPDGAHGSTWGGDELDEVEGKGEL-LYKINGAATTCDDAGDTGLDCYEPEFFYPRDVWIGATYTAELTITQAVADRSHGGVIYYFCHIHSKMSGKIVINTVDGTRFEPTLNPTELELYSPVVRSAIDATCGTTGVAQY------TYGQSMACSGSFLCGDLDTNPRFGQCLQGVDCAMNKGMFGESTPDHASPVVTFMEQMIPHHLNAVNMAKLLLKTDLDSVAATDGLED----ILWDIVNVQNYQVHQFRNYLEAN 301
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S1I2T7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I2T7_9EUGL) HSP 1 Score: 170 bits (431), Expect = 3.630e-47 Identity = 103/274 (37.59%), Postives = 142/274 (51.82%), Query Frame = 1
Query: 28 YEFNQLEASNWYHPLGFAYYPDGAHE------GVDELEEGIGS-GDAPVYVINGELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVT-EIFYFCHIHNGMSGRIHIVDAEGDAPADTEIELYDPLEFDEFDEECGTFGSADY--------------APADAGTFDSELCP---------NQKFLCGDVATSNTVAFMHQMIPHHENAVNMARVLLKNP----------GDEGLDEEVAAVLRDVINTQNYQITFMRGFLTDNGAELVAEEC 726
Y F+Q + +NW HPLG A+ PDGAH+ G E+ +G G+ G VY ++G L+ YE FF+P+ W + +Y +E+++ DP++ EI YFCHIHN MSG IHI GD I +Y P E D FD CGT+G+ Y A G DS+ N + ++ S FMHQMIPHH NAVNMAR+LLK G+EG + V +L +++NTQNYQ++ MR +L +C
Sbjct: 31 YVFDQNDITNWMHPLGLAFKPDGAHDVSYGPDGAPEVVDGAGAKGYTYVYKVDGSNVTLEDYERMFFWPKAEWSKHSYHIEVSIVDPNIAKEIVYFCHIHNKMSGLIHIQGGVGDT-----ITMYAPYEPDAFDATCGTYGAGPYSKRVSEGGRCMHEQATFMCGAVDSQFAKCMDAIDCKMNHEMSVQNIPASPVATFMHQMIPHHVNAVNMARILLKQSKAYGGSIDMAGEEGKYDGVQDMLIEIVNTQNYQMSEMRKWLLLRNFSTTGVQC 299
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A812KHC2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KHC2_9DINO) HSP 1 Score: 170 bits (430), Expect = 2.000e-44 Identity = 112/299 (37.46%), Postives = 155/299 (51.84%), Query Frame = 1
Query: 13 RRGETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGELSD--------LDTYEPQFFFPEETWLETNYTVELTVTDPDVTE-----IFYFCHIHNGMSGRIHIVDAEGD---------APADTEIELYDPLEFDEFDEECGTFGSADYAPADA---------GTFDSE-----------LCPNQKFLCGDVATSNTVAFMHQMIPHHENAVNMARVLLKN-PGDEGLDEEVAAVLRDVINTQNYQITFMRGFL---------TDNGAELVA----EECEN 732
R G+TY F+Q + SNWYH +GFAYYPDGAH G DE +E G G+ +Y ING + LD YEP+FF+P W+ NYT ELT+T I+YFCHIH+ MSGRI I +A+G + E+ L D FD +CGT G++ YA GT D++ + + + D S V FM QMIPHH NAVNMA+++LK+ P + E++ ++ ++NTQN+QI MR +L T +G L+A E C++
Sbjct: 65 RIGQTYTFDQTDPSNWYHAVGFAYYPDGAHGETWGADERDEVEGMGEL-LYKINGAATTCPDAGDTGLDCYEPEFFYPRGDWMAKNYTAELTITQAMADRSHGGVIYYFCHIHSKMSGRIIIRNADGSNVTQANGQPLTSPQELSLDSVPTMDAFDTKCGTTGASAYADGGQMECATKFLPGTHDTDFEECMQAIDCMMNKEMRVVGFDSHQSPIVTFMQQMIPHHANAVNMAKIVLKHAPAEVAAVEDLEDIMWSMVNTQNFQIHAMRNYLASHTSYGQTTHDGVPLMATSVGEHCDS 362
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S0DZJ1_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DZJ1_9EUKA) HSP 1 Score: 164 bits (415), Expect = 5.660e-44 Identity = 106/264 (40.15%), Postives = 141/264 (53.41%), Query Frame = 1
Query: 19 GETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGELSD--------LDTYEPQFFFPEETWLETNYTVELTVTDPDVTE-----IFYFCHIHNGMSGRIHI--VDAEGDAPA--DTEIELYDPLEFDEFDEECGTFGSADYAPADAG--------------TFDSEL----CPNQKFLCGDVATSNTVAFMHQMIPHHENAVNMARVLLKNP-GDEGLDEEVAAVLRDVINTQNYQITFMRGFLT 693
G+TY F+Q + +NWYHP+GFAY PDGAH G DEL+E G G+ +Y ING + LD YEP+FF+P + W+ YT ELT+T I+YFCHIH+ MSG+I I VD P TE+ELY P+ FD+ CGT +Y+ A G TFD L C K + + T F+ QMIPHH NAVNMA++LLK G + + +L +++TQN+QI R L+
Sbjct: 118 GQTYTFDQSDPTNWYHPVGFAYEPDGAHGSTWGGDELDEVEGKGEL-LYKINGAATTCDDAGDTGLDCYEPEFFYPRDVWIGATYTAELTITQAVADRSHGGVIYYFCHIHSKMSGKIVINTVDGTRFEPTLNPTELELYSPVVLSTFDKNCGTTAVVEYSDATGGMACDERFVPGAIDTTFDHCLQAVDCAMNKEMHVPLKAPLTT-FLEQMIPHHANAVNMAKLLLKTDLGAVAATDGLEDILYGIVSTQNFQIHQFRNILS 379
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S3PVF0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVF0_9STRA) HSP 1 Score: 160 bits (406), Expect = 4.660e-43 Identity = 107/268 (39.93%), Postives = 147/268 (54.85%), Query Frame = 1
Query: 19 GETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGEL--------SDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTE------IFYFCHIHNGMSGRIHIVDAEGD--APADTEIELYDPLEFDEFDEECGTFGSADYAPAD---------AGTFDSEL--------CPNQKFLCGDVAT--SNTVA-FMHQMIPHHENAVNMARVLLKNPGDE-GLDEEVAAVLRDVINTQNYQITFMRGFLTDNG 702
G+T F+Q +A+NWYH +GFAY PDGAH G DE E G+G+ Y I+G++ + LD YEP+FF+P W+ Y+ ELT+T PDV I+YFCHIH+ MSG+I I + +G + E+ELY+P D FD CGT ++YA AG D++ C + + S+ VA FM QMIPHH NAVNMA++LLK E +++ +L D+INTQN+QI R +L G
Sbjct: 67 GQTLTFDQTDATNWYHAVGFAYEPDGAHGDDWGADENPEVEGAGELQ-YKIDGQIPTCDDAGDTGLDCYEPEFFYPRGDWMGKVYSAELTIT-PDVAAASKGGVIYYFCHIHSKMSGKIVIKNGDGTDYSNGSDELELYEPTVNDAFDANCGTSDVSEYADGAKNECSIDFFAGMKDTDFEKCLYAVDCQMHYEMYSETTANESDKVALFMQQMIPHHVNAVNMAKLLLKQAKAEVDAVDDLEDILHDIINTQNFQIHQFRNYLGGEG 332
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S0B2P7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0B2P7_9DINO) HSP 1 Score: 159 bits (402), Expect = 1.020e-42 Identity = 113/299 (37.79%), Postives = 155/299 (51.84%), Query Frame = 1
Query: 13 RRGETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGELSD--------LDTYEPQFFFPEETWLETNYTVELTVTDPDVTE-----IFYFCHIHNGMSGRIHIVDAEGDA---------PADTEIELYDPLEFDEFDEECGTFGSADYAPADA---------GTFDSEL--------CP--NQKFLCG-DVATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLD-EEVAAVLRDVINTQNYQITFMRGFL---------TDNGAELVA----EECEN 732
R G+TY F+Q + SNWYHP+GFAYYPDGAH G DE EE +G+ +Y I+G ++ LD Y+P+FF+P W+ NY ELT+T + I+YFC IH+ MSG+I I +A+G P E ELY E FD CG+ G+ YA + + G+ D++ C Q + G D S V FM Q+IPHH NAVNMA++LLK E L +++ +L +IN QNYQ+ R +L NG+ LVA E C++
Sbjct: 14 RIGQTYTFDQRDPSNWYHPVGFAYYPDGAHGATWGGDEREEVEAAGEL-LYKIDGSVTTCPDARDTGLDCYKPEFFYPRADWMAKNYAAELTITQAMADKSHGGVIYYFCRIHSKMSGKIIIQNADGSPVTTATGGPLPNPKERELYPVPERGAFDISCGSTGAEAYARSASMACKDSYLRGSLDTDFKKCMRAIDCQMNRQMRVAGHDTHQSAIVTFMQQIIPHHINAVNMAKILLKFAPTEVLAVKDLEDILWSIINEQNYQVHQFRNYLGGSSAHETRVHNGSSLVATSVGEHCDS 311 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig11246.1109.1 >prot_Ecto-sp13_S_contig11246.1109.1 ID=prot_Ecto-sp13_S_contig11246.1109.1|Name=mRNA_Ecto-sp13_S_contig11246.1109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp VHQHRRGETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPback to top mRNA from alignment at Ecto-sp13_S_contig11246:971..5172+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig11246.1109.1 ID=mRNA_Ecto-sp13_S_contig11246.1109.1|Name=mRNA_Ecto-sp13_S_contig11246.1109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4202bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11246:971..5172+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11246:971..5172+ >mRNA_Ecto-sp13_S_contig11246.1109.1 ID=mRNA_Ecto-sp13_S_contig11246.1109.1|Name=mRNA_Ecto-sp13_S_contig11246.1109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11246:971..5172+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |