mRNA_Ecto-sp13_S_contig11246.1109.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig11246.1109.1
Unique NamemRNA_Ecto-sp13_S_contig11246.1109.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A6H5K2I2_9PHAE (DUF305 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2I2_9PHAE)

HSP 1 Score: 531 bits (1368), Expect = 1.380e-189
Identity = 265/310 (85.48%), Postives = 276/310 (89.03%), Query Frame = 1
Query:   16 RGETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVINGELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGDAPADTEIELYDPLEFDEFDEECGTFGSADYAPADAGTFDSELCPNQKFLCGDV-------------------------ATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDEEVAAVLRDVINTQNYQITFMRGFLTDNGAELVAEECENDDMDGGSDDVPGWAIGVMAVLGVLCLSLLAAVVLKMKGSNVQQASK 870
            RGETYEF+QLEASNWYHPLGFAYYPDGAH GVDELEEGIGSGDAPVYVI+G LSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRI+IVDAEGD PAD EIELYDPLEFDEFDEECGTFGSADYAP D GTFDSELCPNQKFLCGDV                         ATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDEEVAA+LRD+INTQNYQITFMRGFLTDNGAELVAEECEN+D+DG  +DVPGWAIGV+AVLGVLCLSLLAAVVLKMKGSNV +A+K
Sbjct:    3 RGETYEFSQLEASNWYHPLGFAYYPDGAHAGVDELEEGIGSGDAPVYVIDGALSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIYIVDAEGDTPADAEIELYDPLEFDEFDEECGTFGSADYAPVD-GTFDSELCPNQKFLCGDVDSSFDRCMHAIDCKMNYEMRIEKAVATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDEEVAAILRDIINTQNYQITFMRGFLTDNGAELVAEECENEDVDG-DNDVPGWAIGVIAVLGVLCLSLLAAVVLKMKGSNVHEAAK 310          
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: D7FP23_ECTSI (DUF305 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP23_ECTSI)

HSP 1 Score: 538 bits (1385), Expect = 1.930e-186
Identity = 266/310 (85.81%), Postives = 276/310 (89.03%), Query Frame = 1
Query:   16 RGETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVINGELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGDAPADTEIELYDPLEFDEFDEECGTFGSADYAPADAGTFDSELCPNQKFLCGDV-------------------------ATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDEEVAAVLRDVINTQNYQITFMRGFLTDNGAELVAEECENDDMDGGSDDVPGWAIGVMAVLGVLCLSLLAAVVLKMKGSNVQQASK 870
            RGETYEF+QLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVI+G LSDLDTYEPQFFFPEETW+ETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGD PADTEIELY+PLEFDEFDEECGTFGSADYAPAD GTFDSELCPNQKFLCGDV                         ATSNTVAFMHQMIPHHENAVNMAR+LLKNPGDE LDEEVAA+LRD+INTQN+QITFMRGFLTDNGAELVAEECENDDMDG SDDVPGWAIGVMA LGVLCLSLLAAVV+KMKGSNV +  K
Sbjct:   12 RGETYEFSQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVIDGGLSDLDTYEPQFFFPEETWMETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGDTPADTEIELYEPLEFDEFDEECGTFGSADYAPAD-GTFDSELCPNQKFLCGDVDSSFDRCMHAIDCKMNYEMRVEKEVATSNTVAFMHQMIPHHENAVNMARILLKNPGDEELDEEVAAILRDIINTQNFQITFMRGFLTDNGAELVAEECENDDMDGDSDDVPGWAIGVMAALGVLCLSLLAAVVVKMKGSNVHRRRK 320          
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A0L0GD09_9EUKA (DUF305 domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GD09_9EUKA)

HSP 1 Score: 260 bits (665), Expect = 9.780e-82
Identity = 137/255 (53.73%), Postives = 168/255 (65.88%), Query Frame = 1
Query:   16 RGETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVINGELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDAEGDAPADTEIE-LYDPLEFDEFDEECGTFGSADYAPADAGTFDSELCPNQKFLCGD------------------------VATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLDE-EVAAVLRDVINTQNYQITFMRGFLTDNG 702
            RGETY F Q + SNWYHPLGFAY+ DGAHEGVDELEEG+  GD PVY+IN ELS+LD YEP+F FP E W   NYTVELT+ DP++T+ FYFCH+HN MS RI +VD EGD P + E++ LY       FD  CGT  +A ++ A +G  D E C    FLCGD                           ++ V FMHQMIPHH NAVNMA++LLK   ++ +D+ +V  +LRDVINTQN QITFMRG+LT+ G
Sbjct:   55 RGETYTFVQKDISNWYHPLGFAYFADGAHEGVDELEEGLRGGDYPVYMINNELSELDIYEPEFTFPLEFWETNNYTVELTINDPNLTDFFYFCHVHNKMSARIVVVDNEGDQPTEAELQPLYAFTNQSGFDSMCGTTDAAQFS-AQSGGID-EYCDGSVFLCGDQDDKFVQCINAIDCKMNYEMTVENYGNNSIVTFMHQMIPHHVNAVNMAKILLKEILEDNVDDPDVEVMLRDVINTQNAQITFMRGYLTELG 307          
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7R9SV77_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SV77_9CHLO)

HSP 1 Score: 193 bits (490), Expect = 6.760e-56
Identity = 121/269 (44.98%), Postives = 149/269 (55.39%), Query Frame = 1
Query:   19 GETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAPVYVING--ELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHIHNGMSGRIHIVDA-EGDAPADTEIELYDPLEFDEFDEECGTFGSADYAPADAGTFDSE-LCPNQKFLCG-------------------DVATSN-----TVAFMHQMIPHHENAVNMARVLLKNPG-DEGLDEEVAA--VLRDVINTQNYQITFMRGFLTD-NGAELVAEECE 729
            GETY F Q + SNWYHPLGFAYYPDGAHE   E+E   G+G+   Y+ING      LD YEP F      W   +Y + LT+ DP+ TEIFYFCHIHN MSGRI I +A E   P     ELY P   D FD  CGTF + ++        +SE  CPN  FLCG                   ++  +N      V F+HQMIPHH NAVNMA++LLK    DE  D+E+    +L  ++N QN QIT+MR +L D N     A  C+
Sbjct:   59 GETYTFIQNDVSNWYHPLGFAYYPDGAHEDQPEVENDDGTGNVLTYLINGIEPPLGLDDYEPAFAVARADWKMHSYEINLTINDPNTTEIFYFCHIHNKMSGRIRINNANEPYVPK----ELYAPYVPDSFDATCGTFETHNF------DLNSENYCPNSTFLCGAEDNQFSKCMQAIDCKMNYEMRVTNFEPNPIVTFIHQMIPHHVNAVNMAKILLKTTDMDETNDDELEMKEMLLSIVNGQNEQITYMRKWLNDHNYTTSEASRCD 317          
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S0E333_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E333_9EUKA)

HSP 1 Score: 173 bits (439), Expect = 2.250e-48
Identity = 112/280 (40.00%), Postives = 145/280 (51.79%), Query Frame = 1
Query:   19 GETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGELSD--------LDTYEPQFFFPEETWLETNYTVELTVTDPDVTE-----IFYFCHIHNGMSGRIHI--VDAEGDAPA--DTEIELYDPLEFDEFDEECGTFGSADYAPADAGTFDSELCPNQKFLCGDVAT----------------------------SNTVAFMHQMIPHHENAVNMARVLLKNPGD-----EGLDEEVAAVLRDVINTQNYQITFMRGFLTDN 699
            G+TY F+Q + +NWYHP+GFAY PDGAH    G DEL+E  G G+  +Y ING  +         LD YEP+FF+P + W+   YT ELT+T           I+YFCHIH+ MSG+I I  VD     P    TE+ELY P+     D  CGT G A Y      T+   +  +  FLCGD+ T                            S  V FM QMIPHH NAVNMA++LLK   D     +GL++    +L D++N QNYQ+   R +L  N
Sbjct:   33 GQTYTFDQSDPTNWYHPVGFAYEPDGAHGSTWGGDELDEVEGKGEL-LYKINGAATTCDDAGDTGLDCYEPEFFYPRDVWIGATYTAELTITQAVADRSHGGVIYYFCHIHSKMSGKIVINTVDGTRFEPTLNPTELELYSPVVRSAIDATCGTTGVAQY------TYGQSMACSGSFLCGDLDTNPRFGQCLQGVDCAMNKGMFGESTPDHASPVVTFMEQMIPHHLNAVNMAKLLLKTDLDSVAATDGLED----ILWDIVNVQNYQVHQFRNYLEAN 301          
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S1I2T7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I2T7_9EUGL)

HSP 1 Score: 170 bits (431), Expect = 3.630e-47
Identity = 103/274 (37.59%), Postives = 142/274 (51.82%), Query Frame = 1
Query:   28 YEFNQLEASNWYHPLGFAYYPDGAHE------GVDELEEGIGS-GDAPVYVINGELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVT-EIFYFCHIHNGMSGRIHIVDAEGDAPADTEIELYDPLEFDEFDEECGTFGSADY--------------APADAGTFDSELCP---------NQKFLCGDVATSNTVAFMHQMIPHHENAVNMARVLLKNP----------GDEGLDEEVAAVLRDVINTQNYQITFMRGFLTDNGAELVAEEC 726
            Y F+Q + +NW HPLG A+ PDGAH+      G  E+ +G G+ G   VY ++G    L+ YE  FF+P+  W + +Y +E+++ DP++  EI YFCHIHN MSG IHI    GD      I +Y P E D FD  CGT+G+  Y              A    G  DS+            N +    ++  S    FMHQMIPHH NAVNMAR+LLK            G+EG  + V  +L +++NTQNYQ++ MR +L          +C
Sbjct:   31 YVFDQNDITNWMHPLGLAFKPDGAHDVSYGPDGAPEVVDGAGAKGYTYVYKVDGSNVTLEDYERMFFWPKAEWSKHSYHIEVSIVDPNIAKEIVYFCHIHNKMSGLIHIQGGVGDT-----ITMYAPYEPDAFDATCGTYGAGPYSKRVSEGGRCMHEQATFMCGAVDSQFAKCMDAIDCKMNHEMSVQNIPASPVATFMHQMIPHHVNAVNMARILLKQSKAYGGSIDMAGEEGKYDGVQDMLIEIVNTQNYQMSEMRKWLLLRNFSTTGVQC 299          
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A812KHC2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KHC2_9DINO)

HSP 1 Score: 170 bits (430), Expect = 2.000e-44
Identity = 112/299 (37.46%), Postives = 155/299 (51.84%), Query Frame = 1
Query:   13 RRGETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGELSD--------LDTYEPQFFFPEETWLETNYTVELTVTDPDVTE-----IFYFCHIHNGMSGRIHIVDAEGD---------APADTEIELYDPLEFDEFDEECGTFGSADYAPADA---------GTFDSE-----------LCPNQKFLCGDVATSNTVAFMHQMIPHHENAVNMARVLLKN-PGDEGLDEEVAAVLRDVINTQNYQITFMRGFL---------TDNGAELVA----EECEN 732
            R G+TY F+Q + SNWYH +GFAYYPDGAH    G DE +E  G G+  +Y ING  +         LD YEP+FF+P   W+  NYT ELT+T           I+YFCHIH+ MSGRI I +A+G            +  E+ L      D FD +CGT G++ YA             GT D++           +    + +  D   S  V FM QMIPHH NAVNMA+++LK+ P +    E++  ++  ++NTQN+QI  MR +L         T +G  L+A    E C++
Sbjct:   65 RIGQTYTFDQTDPSNWYHAVGFAYYPDGAHGETWGADERDEVEGMGEL-LYKINGAATTCPDAGDTGLDCYEPEFFYPRGDWMAKNYTAELTITQAMADRSHGGVIYYFCHIHSKMSGRIIIRNADGSNVTQANGQPLTSPQELSLDSVPTMDAFDTKCGTTGASAYADGGQMECATKFLPGTHDTDFEECMQAIDCMMNKEMRVVGFDSHQSPIVTFMQQMIPHHANAVNMAKIVLKHAPAEVAAVEDLEDIMWSMVNTQNFQIHAMRNYLASHTSYGQTTHDGVPLMATSVGEHCDS 362          
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S0DZJ1_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DZJ1_9EUKA)

HSP 1 Score: 164 bits (415), Expect = 5.660e-44
Identity = 106/264 (40.15%), Postives = 141/264 (53.41%), Query Frame = 1
Query:   19 GETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGELSD--------LDTYEPQFFFPEETWLETNYTVELTVTDPDVTE-----IFYFCHIHNGMSGRIHI--VDAEGDAPA--DTEIELYDPLEFDEFDEECGTFGSADYAPADAG--------------TFDSEL----CPNQKFLCGDVATSNTVAFMHQMIPHHENAVNMARVLLKNP-GDEGLDEEVAAVLRDVINTQNYQITFMRGFLT 693
            G+TY F+Q + +NWYHP+GFAY PDGAH    G DEL+E  G G+  +Y ING  +         LD YEP+FF+P + W+   YT ELT+T           I+YFCHIH+ MSG+I I  VD     P    TE+ELY P+    FD+ CGT    +Y+ A  G              TFD  L    C   K +   +    T  F+ QMIPHH NAVNMA++LLK   G     + +  +L  +++TQN+QI   R  L+
Sbjct:  118 GQTYTFDQSDPTNWYHPVGFAYEPDGAHGSTWGGDELDEVEGKGEL-LYKINGAATTCDDAGDTGLDCYEPEFFYPRDVWIGATYTAELTITQAVADRSHGGVIYYFCHIHSKMSGKIVINTVDGTRFEPTLNPTELELYSPVVLSTFDKNCGTTAVVEYSDATGGMACDERFVPGAIDTTFDHCLQAVDCAMNKEMHVPLKAPLTT-FLEQMIPHHANAVNMAKLLLKTDLGAVAATDGLEDILYGIVSTQNFQIHQFRNILS 379          
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S3PVF0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVF0_9STRA)

HSP 1 Score: 160 bits (406), Expect = 4.660e-43
Identity = 107/268 (39.93%), Postives = 147/268 (54.85%), Query Frame = 1
Query:   19 GETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGEL--------SDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTE------IFYFCHIHNGMSGRIHIVDAEGD--APADTEIELYDPLEFDEFDEECGTFGSADYAPAD---------AGTFDSEL--------CPNQKFLCGDVAT--SNTVA-FMHQMIPHHENAVNMARVLLKNPGDE-GLDEEVAAVLRDVINTQNYQITFMRGFLTDNG 702
            G+T  F+Q +A+NWYH +GFAY PDGAH    G DE  E  G+G+   Y I+G++        + LD YEP+FF+P   W+   Y+ ELT+T PDV        I+YFCHIH+ MSG+I I + +G   +    E+ELY+P   D FD  CGT   ++YA            AG  D++         C     +  +     S+ VA FM QMIPHH NAVNMA++LLK    E    +++  +L D+INTQN+QI   R +L   G
Sbjct:   67 GQTLTFDQTDATNWYHAVGFAYEPDGAHGDDWGADENPEVEGAGELQ-YKIDGQIPTCDDAGDTGLDCYEPEFFYPRGDWMGKVYSAELTIT-PDVAAASKGGVIYYFCHIHSKMSGKIVIKNGDGTDYSNGSDELELYEPTVNDAFDANCGTSDVSEYADGAKNECSIDFFAGMKDTDFEKCLYAVDCQMHYEMYSETTANESDKVALFMQQMIPHHVNAVNMAKLLLKQAKAEVDAVDDLEDILHDIINTQNFQIHQFRNYLGGEG 332          
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Match: A0A7S0B2P7_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0B2P7_9DINO)

HSP 1 Score: 159 bits (402), Expect = 1.020e-42
Identity = 113/299 (37.79%), Postives = 155/299 (51.84%), Query Frame = 1
Query:   13 RRGETYEFNQLEASNWYHPLGFAYYPDGAHE---GVDELEEGIGSGDAPVYVINGELSD--------LDTYEPQFFFPEETWLETNYTVELTVTDPDVTE-----IFYFCHIHNGMSGRIHIVDAEGDA---------PADTEIELYDPLEFDEFDEECGTFGSADYAPADA---------GTFDSEL--------CP--NQKFLCG-DVATSNTVAFMHQMIPHHENAVNMARVLLKNPGDEGLD-EEVAAVLRDVINTQNYQITFMRGFL---------TDNGAELVA----EECEN 732
            R G+TY F+Q + SNWYHP+GFAYYPDGAH    G DE EE   +G+  +Y I+G ++         LD Y+P+FF+P   W+  NY  ELT+T     +     I+YFC IH+ MSG+I I +A+G           P   E ELY   E   FD  CG+ G+  YA + +         G+ D++         C    Q  + G D   S  V FM Q+IPHH NAVNMA++LLK    E L  +++  +L  +IN QNYQ+   R +L           NG+ LVA    E C++
Sbjct:   14 RIGQTYTFDQRDPSNWYHPVGFAYYPDGAHGATWGGDEREEVEAAGEL-LYKIDGSVTTCPDARDTGLDCYKPEFFYPRADWMAKNYAAELTITQAMADKSHGGVIYYFCRIHSKMSGKIIIQNADGSPVTTATGGPLPNPKERELYPVPERGAFDISCGSTGAEAYARSASMACKDSYLRGSLDTDFKKCMRAIDCQMNRQMRVAGHDTHQSAIVTFMQQIIPHHINAVNMAKILLKFAPTEVLAVKDLEDILWSIINEQNYQVHQFRNYLGGSSAHETRVHNGSSLVATSVGEHCDS 311          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11246.1109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2I2_9PHAE1.380e-18985.48DUF305 domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FP23_ECTSI1.930e-18685.81DUF305 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A0L0GD09_9EUKA9.780e-8253.73DUF305 domain-containing protein n=1 Tax=Sphaerofo... [more]
A0A7R9SV77_9CHLO6.760e-5644.98Hypothetical protein (Fragment) n=1 Tax=Polyblepha... [more]
A0A7S0E333_9EUKA2.250e-4840.00Hypothetical protein (Fragment) n=2 Tax=Phaeocysti... [more]
A0A7S1I2T7_9EUGL3.630e-4737.59Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A812KHC2_9DINO2.000e-4437.46Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A7S0DZJ1_9EUKA5.660e-4440.15Hypothetical protein (Fragment) n=2 Tax=Phaeocysti... [more]
A0A7S3PVF0_9STRA4.660e-4339.93Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S0B2P7_9DINO1.020e-4237.79Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11246contigEcto-sp13_S_contig11246:971..5172 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score538.1
Seed ortholog evalue2.5e-150
Seed eggNOG ortholog2880.D7FP23
Model size873
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Domain of unknown function (DUF305)
EggNOG OGs2C8JY@1,2S34M@2759
Ec32 ortholog descriptionDomain of unknown function DUF305
Ec32 orthologEc-05_001700.1
Cds size873
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11246.1109.1prot_Ecto-sp13_S_contig11246.1109.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig11246 971..5172 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462587.5743508-CDS-Ecto-sp13_S_contig11246:970..11091681462587.5743508-CDS-Ecto-sp13_S_contig11246:970..1109Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11246 971..1109 +
1681462587.5894496-CDS-Ecto-sp13_S_contig11246:2053..22341681462587.5894496-CDS-Ecto-sp13_S_contig11246:2053..2234Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11246 2054..2234 +
1681462587.5999959-CDS-Ecto-sp13_S_contig11246:2893..30241681462587.5999959-CDS-Ecto-sp13_S_contig11246:2893..3024Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11246 2894..3024 +
1681462587.6083694-CDS-Ecto-sp13_S_contig11246:3336..33891681462587.6083694-CDS-Ecto-sp13_S_contig11246:3336..3389Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11246 3337..3389 +
1681462587.6227162-CDS-Ecto-sp13_S_contig11246:4059..41761681462587.6227162-CDS-Ecto-sp13_S_contig11246:4059..4176Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11246 4060..4176 +
1681462587.6328757-CDS-Ecto-sp13_S_contig11246:4920..51721681462587.6328757-CDS-Ecto-sp13_S_contig11246:4920..5172Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig11246 4921..5172 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig11246.1109.1

>prot_Ecto-sp13_S_contig11246.1109.1 ID=prot_Ecto-sp13_S_contig11246.1109.1|Name=mRNA_Ecto-sp13_S_contig11246.1109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=291bp
VHQHRRGETYEFNQLEASNWYHPLGFAYYPDGAHEGVDELEEGIGSGDAP
VYVINGELSDLDTYEPQFFFPEETWLETNYTVELTVTDPDVTEIFYFCHI
HNGMSGRIHIVDAEGDAPADTEIELYDPLEFDEFDEECGTFGSADYAPAD
AGTFDSELCPNQKFLCGDVATSNTVAFMHQMIPHHENAVNMARVLLKNPG
DEGLDEEVAAVLRDVINTQNYQITFMRGFLTDNGAELVAEECENDDMDGG
SDDVPGWAIGVMAVLGVLCLSLLAAVVLKMKGSNVQQASK*
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mRNA from alignment at Ecto-sp13_S_contig11246:971..5172+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig11246.1109.1 ID=mRNA_Ecto-sp13_S_contig11246.1109.1|Name=mRNA_Ecto-sp13_S_contig11246.1109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4202bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11246:971..5172+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTACACCAACATCGCAGGGGAGAGACGTACGAGTTTAACCAGCTGGAGGC ATCCAACTGGTACCACCCGTTGGGCTTCGCGTACTACCCTGACGGGGCGC ACGAGGGCGTCGACGAGCTCGAAGAGGGTATCGGAAGCGGTGAGAGATGT CGCCTGGGGGGGGTGGCAGACACAGCTGAAAGCATCTTAGTTCCAGCCAA TTGTCACATCGAAACATCTTGCTTTCTTGAGATGATCACGCCGATGGTGT GATCGTGCGTGGACGATGTGTCGGCACGCGAAACTGGCTGGCTGGCTGTA GGGTCACCCCTATTGTTCGCACAACCACGAAATATGTGGCTTCGAGAGAG CTTTCTCCGGTGATCGATGCGTTTGTTGGCGTTGACCCACTCTACTTTTT ATCTTCTGGCTTCAGAGCCACTTTTTTGGCTCTTGTTTGGTCTGGGTCTT GCCGTTCACCTTGGCTTTTCTCCACGCTTTTAGGGGGTAGAATACCAACG GTGATCCGTGTGCGTCGACCTTTGATTAACGCTCTCAGACGAAGGTCTCC ATGGACCGCTTGCACACCCCCCTTTGTTAAGAGTGCGCCCGTTGCATAAA ATGGGAATCGTTAAATGTAGTTGGTGAATTCTGTGCCTCTACATGGAAGT AGGCGCCCGCTAGCGATCATCCCCGCTACCAAACAGGGGATCAAATTTCA CGGAGAACGTTTCAGATTATCCTGTCAACAACACAACACACGTTGGAGGC GGGCGGATCCATCTTTCAATAAATCGTAGTACTACTGACTACACCTAATT GCGCGTTTACATGACTACACTCCCCCCGGTCCCTCCTCTGAGGCAGCCAA AACATGAGTACAACCTCCACTCCCCCCCCTCCGGTCCACGTTGTTTCTCA TTTCAGAGGACGCCCGCGTGTACGTATTTGACGACCTGATCCCCCGCTCC GTCCCGGCATTTCAAGGATGATAGGTCTGCGGTCTACCGACTCCTGCGGC ATATGCGTGCACATGAGTACACACCCTCTTCCCGTAAGGCATGCAACACT GAACCCCCCCCCCCTTCGTTTTATTTTTTCCAGGCGACGCCCCCGTGTAC GTGATTAACGGAGAGCTGTCCGACCTGGACACGTACGAGCCGCAGTTCTT CTTCCCCGAGGAGACCTGGCTGGAGACCAACTACACGGTGGAGCTCACCG TCACCGACCCGGACGTGACGGAAATCTTCTACTTCTGCCACATTCACAAC GGCATGTCCGGAAGGTAAAAGGGGGCGTGTGTGTTCACTGTCCTCTGAAC GATACGTGGTCGATGGTCTAACCTCAAAGGCATGCAAAACGTAAAGAGTA CGCCCCCCCCCCAGCGGGAGATGAAAATACGAGGGTCTCTAGATGGGTTC ATTCGTCGAAGGCGGCTGAGTAATTTTGTTTCTTGTTGCCCTGCTTTATG TTTTGGGGACTCCTGTTGTTGGCTTGAATGTTCACAACGTTGGTTGGATG CGTTCCAAGCTGTGTTTAGGGCCATATTGTGGATTGCAATATTGAGGTTC CGCCATTATTAGCAGTTCGAGGGGGGTTTGAATCGAGCTTAGGGTTCCAC CTTCGTATTGCTGGCCGTGGGGATCTTTTTTTGAGCAGTCGATCGATATC GATCAATCTTAACCTCCAGGGCGAAAGCGGACTTGAACAACCCCCGGCGA ATCATCACAGCGACGCTCGCTCGACATCTTGTCGTCGCTCTGTCTAGAGT CTACCTCCCGGCTCCAGCGGGACCTTTTGTGACGCAGGTGTTGACGACTT GTCTCTTTTTTCTACTCCCGCCGGCCCCGTGCGTGCTCTGCCTTGGAGGT GTTGAAGTGTTCCTTTGTTGGCCGTCGCGTGGCCCTCGCGTGCTGCTATT GCTGCGTCCTGTGTCCACCGCAGGATTCACATCGTTGATGCGGAGGGTGA CGCCCCGGCGGACACGGAGATCGAGCTTTACGACCCTCTGGAGTTCGATG AGTTCGACGAAGAGTGTGGTACCTTCGGCTCCGCTGACTACGCCCCGGCT GACGGTGAGAGAGAGGGAGTCACGTAGCAGCGATAAATAGATTTCTTGCC CAAGCGCAAGGTTGAGGTATTCTTTGCCCCACGCGGGAGGTTGAGGTGGT CGCCTATTTTCGTGTCACGGGTTGGGGTCCCCACCCCCCCTCCTTCAAGG CAACACGCCGTTTGTGTTGGAACCCTTCTGTTGAGGCCCCTGCGTTGTGG TGAGGGAACACGCACCGTCTCGACTTCTTCATTGTCTGGCACAAGGGCGA TCGCCTGTATCGTGTTGCAAGCCGTTCGTTGAACGCTTCTGTCTTGTTTT GTGGTTGCACGTTGAGCAGGAACGTTCGACAGCGAGCTCTGCCCCAACCA AAAGTTCCTGTGCGGAGACGTGGACAGCAGCTTCGACCGNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCGAAGTCCAGAGCAGTCTAG GGTTAAAGAATGCCGCTGAAGCGGACAATAGAACTGAGTATTGTGCGATA GGTCCACGTACATGGCTCCACGCCCCTCCTACGCCCTAGCGCCGCACACA TCAATCACCAATATTTTTTCTCACCTACATCCTCACCGCCACTTTTTTGC CCATGTCCGCGCCCTCCCGCCACCGCGTGCGTTTTGGTACCGCTTGCGTT TCGCTGTTGTTGCTGTTGTTGGTGCTGCTGTGGCAGGAGGTTGCCACCAG CAACACGGTAGCGTTCATGCACCAGATGATCCCTCACCACGAGAACGCGG TGAACATGGCGAGAGTCCTGCTGAAAAACCCGGGTGACGAGGGGCTCGAC GAGGAGGTGAGCTCTCAACCACGTGGCTGACTTCCTTCGAAGCAACCGCG CGATGCAGAAGTAGCACAGAGACATGAAACATCAAAGTCGGGTCGGACAG TCGGCTTCATCTTTTCGTCGCCACTGCTGTCGAGCACAAGTCGTTGTGTG GAGGACCATATGGAGCAAGGATCCACCGCTGAGGTGTGTCCGCTGCGGTT TGTTGCTTCACCTTTTTTCTTATTTGTTGGTGAACATGTGAGCCTCTGCT TCCTAGCAACATGCTTCGCGCAGACTGCGGGCCCGTTTTTGTCGGCGACG GTAACTTTGCGGGCTTGTTCGTATTCTCACGACACCGCTGCGGTGTGAGA CGTTCTGGACATTGCTCGGGGGACCGGTTGCGGTGGGCAAAGGAAAGACA GATGTAGCTCCCAGCACTGCCTTTCGCTCGCCGTACCGTGGTCATGCCGA CGGCCTCGCGTGCCGTTCGAGTGCACCGCAGGAATCACCTATGTTGGAAG TAGGGAGAGGAAGAGGTCCAGTGCAGTACCGACGGTGGAATTTTTGTTCC AAGCATGTTGGAAAAAGTATGGAATATTCTTGGGCGCAGCCCGGTTTTGG GAAGGACATCAACAAGCATCTCCCTTTTTTCGTCATGCCCTCTGATCTGG AGGTCAGTCCTTACACCTTAATTATGGACGCGCCCGCCGGGGGGGGCACA CACACCATCCCTGATCCATGAGCGCACCTCCTTGCGTATCGCCCGCACAG GTAGCCGCAGTACTCCGGGATGTCATCAACACCCAAAACTACCAGATAAC CTTCATGCGGGGGTTCCTCACCGATAACGGTGCGGAGCTTGTGGCGGAAG AGTGTGAGAACGACGACATGGACGGGGGCAGCGACGACGTTCCCGGGTGG GCGATCGGCGTCATGGCCGTGCTTGGGGTGCTCTGCCTGTCTCTCCTGGC CGCGGTGGTCTTGAAGATGAAGGGCAGCAACGTCCAGCAAGCATCGAAAT AA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig11246:971..5172+

>mRNA_Ecto-sp13_S_contig11246.1109.1 ID=mRNA_Ecto-sp13_S_contig11246.1109.1|Name=mRNA_Ecto-sp13_S_contig11246.1109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=873bp|location=Sequence derived from alignment at Ecto-sp13_S_contig11246:971..5172+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTACACCAACATCGCAGGGGAGAGACGTACGAGTTTAACCAGCTGGAGGC
ATCCAACTGGTACCACCCGTTGGGCTTCGCGTACTACCCTGACGGGGCGC
ACGAGGGCGTCGACGAGCTCGAAGAGGGTATCGGAAGCGGCGACGCCCCC
GTGTACGTGATTAACGGAGAGCTGTCCGACCTGGACACGTACGAGCCGCA
GTTCTTCTTCCCCGAGGAGACCTGGCTGGAGACCAACTACACGGTGGAGC
TCACCGTCACCGACCCGGACGTGACGGAAATCTTCTACTTCTGCCACATT
CACAACGGCATGTCCGGAAGGATTCACATCGTTGATGCGGAGGGTGACGC
CCCGGCGGACACGGAGATCGAGCTTTACGACCCTCTGGAGTTCGATGAGT
TCGACGAAGAGTGTGGTACCTTCGGCTCCGCTGACTACGCCCCGGCTGAC
GCAGGAACGTTCGACAGCGAGCTCTGCCCCAACCAAAAGTTCCTGTGCGG
AGACGTTGCCACCAGCAACACGGTAGCGTTCATGCACCAGATGATCCCTC
ACCACGAGAACGCGGTGAACATGGCGAGAGTCCTGCTGAAAAACCCGGGT
GACGAGGGGCTCGACGAGGAGGTAGCCGCAGTACTCCGGGATGTCATCAA
CACCCAAAACTACCAGATAACCTTCATGCGGGGGTTCCTCACCGATAACG
GTGCGGAGCTTGTGGCGGAAGAGTGTGAGAACGACGACATGGACGGGGGC
AGCGACGACGTTCCCGGGTGGGCGATCGGCGTCATGGCCGTGCTTGGGGT
GCTCTGCCTGTCTCTCCTGGCCGCGGTGGTCTTGAAGATGAAGGGCAGCA
ACGTCCAGCAAGCATCGAAATAA
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